AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47284


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47284.t1 MTR_6g027590 98.023 354 7 0 1 354 1 354 0.0 724
MS.gene47284.t1 MTR_6g471010 95.480 354 16 0 1 354 1 354 0.0 712
MS.gene47284.t1 MTR_5g020810 37.143 350 201 4 2 346 413 748 9.97e-78 253
MS.gene47284.t1 MTR_3g118160 31.117 376 225 8 2 347 421 792 2.33e-47 171
MS.gene47284.t1 MTR_3g088120 24.784 347 218 6 2 341 33 343 2.76e-33 127
MS.gene47284.t1 MTR_3g088380 32.218 239 125 4 3 234 11 219 3.45e-33 126
MS.gene47284.t1 MTR_3g088120 26.531 294 178 5 2 288 33 295 2.88e-32 122
MS.gene47284.t1 MTR_4g102860 29.310 232 131 5 3 233 17 216 9.81e-26 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47284.t1 AT5G27740 85.028 354 53 0 1 354 1 354 0.0 650
MS.gene47284.t1 AT1G21690 32.636 239 124 4 3 234 11 219 1.16e-32 125
MS.gene47284.t1 AT1G21690 32.636 239 124 4 3 234 11 219 1.37e-32 124
MS.gene47284.t1 AT1G21690 31.799 239 119 4 3 234 11 212 2.03e-30 118
MS.gene47284.t1 AT1G77470 27.642 246 146 4 3 247 41 255 2.35e-29 116
MS.gene47284.t1 AT1G21690 32.636 239 112 6 3 234 11 207 2.72e-29 115
MS.gene47284.t1 AT1G63160 27.530 247 145 6 3 248 17 230 2.99e-24 102

Find 79 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAAGCGATGCAGGCTTTC+AGG 0.177682 6.4:+2393186 MS.gene47284:CDS
TAGAACATTGTCTAGGGTTT+TGG 0.211566 6.4:-2391048 None:intergenic
TGTCCTCATTTGCTGTTCTA+TGG 0.252413 6.4:+2391218 MS.gene47284:CDS
TCCTTCCTCATTGCAACATT+TGG 0.283181 6.4:+2396444 MS.gene47284:CDS
TTGCTGTTCTATGGTCCTTC+AGG 0.286128 6.4:+2391227 MS.gene47284:CDS
CAGCACCAGGTCCAAACATT+TGG 0.316754 6.4:-2391286 None:intergenic
TTTCTTCCCTTTAGTATCAA+TGG 0.323241 6.4:-2393257 None:intergenic
GCAAGTCTCCAATGATAATA+TGG 0.323719 6.4:-2394675 None:intergenic
AAAGGGAAGAAAGGATTTAA+AGG 0.324156 6.4:+2393268 MS.gene47284:CDS
GCTCTTCTCCGCCAAATGTT+TGG 0.325475 6.4:+2391275 MS.gene47284:CDS
TTCTTCCCTTTAGTATCAAT+GGG 0.348124 6.4:-2393256 None:intergenic
TGGAGTCATTTCAATATGAT+TGG 0.356473 6.4:-2393167 None:intergenic
GAAGGGCTACAACTTCCTTC+TGG 0.367171 6.4:+2394605 MS.gene47284:CDS
CTCTACACTGACAGCATTTG+TGG 0.369345 6.4:+2396398 MS.gene47284:intron
GGCGGAGAAGAGCCATGATT+AGG 0.386355 6.4:-2391265 None:intergenic
TTCTATGGTCCTTCAGGCTC+TGG 0.398815 6.4:+2391233 MS.gene47284:CDS
GAGGAGGGCCATATTATCAT+TGG 0.399231 6.4:+2394667 MS.gene47284:CDS
TCCTGAAAGCCTGCATCGCT+TGG 0.402265 6.4:-2393187 None:intergenic
GCGGAGAAGAGCCATGATTA+GGG 0.410779 6.4:-2391264 None:intergenic
TTTACCTTCAAAATGATCTC+TGG 0.416432 6.4:-2395168 None:intergenic
TGAAGGAACAGAGCCCAAAA+AGG 0.416911 6.4:+2394925 MS.gene47284:CDS
GTTGGTATTTCAGGTGAAGT+TGG 0.432516 6.4:+2392523 MS.gene47284:intron
TCAAGAAATAATCAAAGAAA+TGG 0.433507 6.4:+2393222 MS.gene47284:CDS
CGTTCTGCGGAGAGAATGTT+GGG 0.440273 6.4:-2393497 None:intergenic
AAATGCACCAAGTGAAGAAC+AGG 0.440498 6.4:+2393618 MS.gene47284:CDS
CAGTTCATTGGTAAGAAAGA+AGG 0.442426 6.4:+2394587 MS.gene47284:CDS
TTTGTAGATGCTCATGAACT+TGG 0.449160 6.4:-2396421 None:intergenic
CTCCGCCAAATGTTTGGACC+TGG 0.453363 6.4:+2391281 MS.gene47284:CDS
TTCAGGTGAAGTTGGAGAAT+AGG 0.455815 6.4:+2392531 MS.gene47284:intron
AGAGAGAAGAACGATGTTGT+GGG 0.456869 6.4:+2391010 None:intergenic
AGAAATCAAATCGGAATTTG+AGG 0.467465 6.4:+2394648 MS.gene47284:CDS
TATTCGTACATTAAGACAAC+GGG 0.467729 6.4:-2393596 None:intergenic
AATAGACCCATTGATACTAA+AGG 0.470695 6.4:+2393250 MS.gene47284:CDS
GGCTGCTTTATGCGCTATTG+AGG 0.476133 6.4:+2395269 MS.gene47284:CDS
ATTGTTTGTTTGTCAGTGAA+AGG 0.479733 6.4:-2394852 None:intergenic
ATAGACCCATTGATACTAAA+GGG 0.485089 6.4:+2393251 MS.gene47284:CDS
GTTTGGACCTGGTGCTGAAA+AGG 0.486709 6.4:+2391292 MS.gene47284:CDS
TTTAGGTTGTTTCAAGTTCG+TGG 0.487361 6.4:+2395111 MS.gene47284:intron
ATATATTCTTCCCAGTCCAT+TGG 0.489328 6.4:-2394879 None:intergenic
ATTGATACTAAAGGGAAGAA+AGG 0.491720 6.4:+2393259 MS.gene47284:CDS
TGAAGCATGAAGTCTGCCAT+TGG 0.492009 6.4:+2395308 MS.gene47284:CDS
TTACTAACCTGTTCTTCACT+TGG 0.496208 6.4:-2393625 None:intergenic
TGTGAACTAGAACATTGTCT+AGG 0.504995 6.4:-2391055 None:intergenic
AAACAATTCCTCCAATGGAC+TGG 0.507805 6.4:+2394868 MS.gene47284:CDS
GCTCTGTTCCTTCATTATGT+CGG 0.511967 6.4:-2394916 None:intergenic
TCATTGCAACATTTGGCTGA+AGG 0.524105 6.4:+2396451 MS.gene47284:CDS
GTGAACTAGAACATTGTCTA+GGG 0.525927 6.4:-2391054 None:intergenic
CCTCATTGAACCAGGAACAT+AGG 0.527929 6.4:+2395556 MS.gene47284:intron
GAAGCATGAAGTCTGCCATT+GGG 0.530639 6.4:+2395309 MS.gene47284:CDS
AGTTCATTGGTAAGAAAGAA+GGG 0.531136 6.4:+2394588 MS.gene47284:CDS
CACCAGGTCCAAACATTTGG+CGG 0.533440 6.4:-2391283 None:intergenic
TATTCTTCCCAGTCCATTGG+AGG 0.537168 6.4:-2394876 None:intergenic
TGGCAAGAAAACCCTAATCA+TGG 0.537203 6.4:+2391253 MS.gene47284:CDS
GAAATGACTCCAAGCGATGC+AGG 0.544680 6.4:+2393178 MS.gene47284:CDS
AGTACTAGTGCTTAATGATG+TGG 0.546260 6.4:+2393456 MS.gene47284:intron
CAAACAAACAATTCCTCCAA+TGG 0.546977 6.4:+2394863 MS.gene47284:CDS
TAGGATGCGCCTTGGACAGA+AGG 0.549273 6.4:+2395575 MS.gene47284:CDS
AATTGCATCCGACATAATGA+AGG 0.550631 6.4:+2394908 MS.gene47284:CDS
TCGTTCTGCGGAGAGAATGT+TGG 0.552349 6.4:-2393498 None:intergenic
CAGGAACATAGGATGCGCCT+TGG 0.553627 6.4:+2395567 MS.gene47284:intron
ATTGGTTTCAGGCTGGGAGT+AGG 0.555451 6.4:+2393110 MS.gene47284:intron
GAGAGAGAAGAACGATGTTG+TGG 0.555979 6.4:+2391009 None:intergenic
GCCAAATGTTGCAATGAGGA+AGG 0.563630 6.4:-2396445 None:intergenic
GGACCATAGAACAGCAAATG+AGG 0.574079 6.4:-2391221 None:intergenic
GTACATTAAGACAACGGGAG+CGG 0.575694 6.4:-2393591 None:intergenic
ATTAAGACAACGGGAGCGGA+TGG 0.578928 6.4:-2393587 None:intergenic
TGTATTTCTCCATCGTTCTG+CGG 0.579107 6.4:-2393510 None:intergenic
AACAATTCCTCCAATGGACT+GGG 0.583344 6.4:+2394869 MS.gene47284:CDS
ACATTCTCTCCGCAGAACGA+TGG 0.595529 6.4:+2393501 MS.gene47284:CDS
GTATAGCAGAGAAATCAAAT+CGG 0.601405 6.4:+2394639 MS.gene47284:CDS
ACCTTCAAAATGATCTCTGG+AGG 0.601868 6.4:-2395165 None:intergenic
ATCAAATCGGAATTTGAGGA+GGG 0.625589 6.4:+2394652 MS.gene47284:CDS
AATCAAATCGGAATTTGAGG+AGG 0.632114 6.4:+2394651 MS.gene47284:CDS
ATACGAGCAGCGAAACCAGA+AGG 0.638037 6.4:-2394620 None:intergenic
TTATTCGTACATTAAGACAA+CGG 0.642459 6.4:-2393597 None:intergenic
TGAAGTTGGAGAATAGGACA+TGG 0.644504 6.4:+2392537 MS.gene47284:CDS
TTACATAATATGCAGCCCAA+TGG 0.646334 6.4:-2395324 None:intergenic
TTCAGCCAAATGTTGCAATG+AGG 0.665561 6.4:-2396449 None:intergenic
GTGGAGCTTACTGTTGGACA+CGG 0.710106 6.4:-2394697 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAATTTAGAAGTA+TGG - chr6.4:2393861-2393880 None:intergenic 10.0%
!! TAAAGATTAATTCTTTAAAT+AGG + chr6.4:2396210-2396229 MS.gene47284:intron 10.0%
!! AGGTTTATAAAAAGTAAATA+AGG + chr6.4:2396081-2396100 MS.gene47284:intron 15.0%
!! ATAAGTTATTTATATAGCAA+AGG - chr6.4:2391876-2391895 None:intergenic 15.0%
!! GGTTTATAAAAAGTAAATAA+GGG + chr6.4:2396082-2396101 MS.gene47284:intron 15.0%
!! TAAATATTATACAGAAAGTT+CGG - chr6.4:2394410-2394429 None:intergenic 15.0%
!!! ATTTTTATTTATAAGTACTG+CGG + chr6.4:2393086-2393105 MS.gene47284:intron 15.0%
!!! TGATATGTTTTTAAGATATA+CGG + chr6.4:2392789-2392808 MS.gene47284:intron 15.0%
!!! TTTGTTTTTTTCAATTTGTT+AGG + chr6.4:2393880-2393899 MS.gene47284:intron 15.0%
!! AAATACTTTGATACTTATCA+GGG + chr6.4:2395866-2395885 MS.gene47284:intron 20.0%
!! AACTAACAAGCAAAATAATA+TGG - chr6.4:2393771-2393790 None:intergenic 20.0%
!! AAGTTCAAACTTATATTAGT+TGG + chr6.4:2392224-2392243 MS.gene47284:intron 20.0%
!! AATGTTTATAAAAGAGAACT+TGG - chr6.4:2394246-2394265 None:intergenic 20.0%
!! AATTGTAAATCAAATACAGT+AGG - chr6.4:2395420-2395439 None:intergenic 20.0%
!! ATACAAAGTAGTTATAGATT+GGG + chr6.4:2396318-2396337 MS.gene47284:intron 20.0%
!! ATATTTACAATTATTGAACC+AGG - chr6.4:2391553-2391572 None:intergenic 20.0%
!! CATAAAACTTATCAACTTTA+AGG - chr6.4:2395008-2395027 None:intergenic 20.0%
!! GAAACACTATTAAATTTGAA+CGG + chr6.4:2392639-2392658 MS.gene47284:intron 20.0%
!! GTTCATCTTTACTAAATATT+TGG + chr6.4:2394534-2394553 MS.gene47284:intron 20.0%
!! TATACAAAGTAGTTATAGAT+TGG + chr6.4:2396317-2396336 MS.gene47284:intron 20.0%
!! TCAAGAAATAATCAAAGAAA+TGG + chr6.4:2393222-2393241 MS.gene47284:CDS 20.0%
!! TTAATTCTTTAAATAGGTCT+TGG + chr6.4:2396216-2396235 MS.gene47284:intron 20.0%
!! TTCAAATTTAATAGTGTTTC+TGG - chr6.4:2392639-2392658 None:intergenic 20.0%
!! TTGTATAAGAAACACAATTA+AGG - chr6.4:2391141-2391160 None:intergenic 20.0%
!!! AAAAATAAAAAGTACACACT+TGG + chr6.4:2391376-2391395 MS.gene47284:intron 20.0%
!!! AAAATAAAAAGTACACACTT+GGG + chr6.4:2391377-2391396 MS.gene47284:intron 20.0%
!!! AAACTCTATAATCTCTTTTT+TGG - chr6.4:2396298-2396317 None:intergenic 20.0%
!!! AACTTATATTAGTTGGTTTT+TGG + chr6.4:2392231-2392250 MS.gene47284:intron 20.0%
!!! AAGTTTTTTTTTATCCAAAC+AGG + chr6.4:2391942-2391961 MS.gene47284:intron 20.0%
!!! ACATTCTTGTAATTTTTGTT+AGG + chr6.4:2391160-2391179 MS.gene47284:intron 20.0%
!!! AGAAAATTTCTAGATATAGA+AGG + chr6.4:2392134-2392153 MS.gene47284:intron 20.0%
!!! AGATTATTTTAGTAATGCTA+AGG - chr6.4:2392328-2392347 None:intergenic 20.0%
!!! AGTTTTTTTTTATCCAAACA+GGG + chr6.4:2391943-2391962 MS.gene47284:intron 20.0%
!!! CAATGTGCAATTTATATTTT+TGG + chr6.4:2392277-2392296 MS.gene47284:intron 20.0%
!!! CATTCTTGTAATTTTTGTTA+GGG + chr6.4:2391161-2391180 MS.gene47284:intron 20.0%
!!! CTTTTCAAAGATTTGTTTTA+TGG + chr6.4:2394773-2394792 MS.gene47284:intron 20.0%
!!! GGGTTCAATTTTATTTTTTT+GGG + chr6.4:2391397-2391416 MS.gene47284:intron 20.0%
!!! TGATAAGTATCAAAGTATTT+GGG - chr6.4:2395866-2395885 None:intergenic 20.0%
!!! TGGGTTCAATTTTATTTTTT+TGG + chr6.4:2391396-2391415 MS.gene47284:intron 20.0%
!!! TTGGTTTTTTTTTAAGCATT+GGG + chr6.4:2393697-2393716 MS.gene47284:intron 20.0%
!!! TTTGGTTTTTTTTTAAGCAT+TGG + chr6.4:2393696-2393715 MS.gene47284:intron 20.0%
!!! TTTTTTTTTATTGCAGGTTT+CGG + chr6.4:2391187-2391206 MS.gene47284:intron 20.0%
! AAAAACTGAGGTAAACTAAA+GGG - chr6.4:2393407-2393426 None:intergenic 25.0%
! AAATGAAGAATACATGGTAA+TGG - chr6.4:2395502-2395521 None:intergenic 25.0%
! AACTAAAGGGATAAAAACAA+AGG - chr6.4:2393394-2393413 None:intergenic 25.0%
! AATGACAACACAAAAGTAAA+GGG - chr6.4:2392600-2392619 None:intergenic 25.0%
! ACTATTAAATTTGAACGGTT+TGG + chr6.4:2392644-2392663 MS.gene47284:intron 25.0%
! ATAGATATATCCAAGAATCA+AGG - chr6.4:2392914-2392933 None:intergenic 25.0%
! ATGACAAATGTTAGTAACTT+AGG + chr6.4:2393349-2393368 MS.gene47284:intron 25.0%
! CAAATACTTTGATACTTATC+AGG + chr6.4:2395865-2395884 MS.gene47284:intron 25.0%
! CATATTAAATGATAAGCTTG+TGG - chr6.4:2394719-2394738 None:intergenic 25.0%
! CTAAATCAGTTAATATCAAC+AGG + chr6.4:2396061-2396080 MS.gene47284:intron 25.0%
! CTATTAAATTTGAACGGTTT+GGG + chr6.4:2392645-2392664 MS.gene47284:intron 25.0%
! TAAATATTTGGAGATCTATG+TGG + chr6.4:2394546-2394565 MS.gene47284:intron 25.0%
! TACTCCTCACTAATTATTAA+GGG - chr6.4:2392693-2392712 None:intergenic 25.0%
! TAGTTATAGATTGGGATATA+AGG + chr6.4:2396326-2396345 MS.gene47284:intron 25.0%
! TGAACATTCAACTCATAAAA+TGG - chr6.4:2394519-2394538 None:intergenic 25.0%
! TGATATTTCATTTCAGAATC+TGG + chr6.4:2395361-2395380 MS.gene47284:intron 25.0%
! TGTCATAATATGTCTTAACA+TGG - chr6.4:2393913-2393932 None:intergenic 25.0%
! TTAAAAACTAGCTATCAAAG+AGG - chr6.4:2395834-2395853 None:intergenic 25.0%
! TTATTCGTACATTAAGACAA+CGG - chr6.4:2393600-2393619 None:intergenic 25.0%
!! CTGATAAGTATCAAAGTATT+TGG - chr6.4:2395867-2395886 None:intergenic 25.0%
!! CTTTTATAAACATTGTGGTT+AGG + chr6.4:2394252-2394271 MS.gene47284:intron 25.0%
!! GTTCTCTTTTATAAACATTG+TGG + chr6.4:2394247-2394266 MS.gene47284:intron 25.0%
!! TAGTTTGAGATGTATTTCAT+TGG + chr6.4:2393010-2393029 MS.gene47284:intron 25.0%
!! TTATACTGTTGTTTACTTCT+TGG + chr6.4:2392463-2392482 MS.gene47284:intron 25.0%
!!! ATAAGTTTTGTGAGACTATT+TGG + chr6.4:2391722-2391741 MS.gene47284:intron 25.0%
!!! CAATTTTTTGAGATTTTGAG+CGG - chr6.4:2391087-2391106 None:intergenic 25.0%
!!! GAAGGAATGTAATTGATTTT+TGG + chr6.4:2392152-2392171 MS.gene47284:intron 25.0%
!!! GATAGTGATTTGTTCATATT+TGG + chr6.4:2394094-2394113 MS.gene47284:intron 25.0%
!!! GGGTTTTTTTTTTTTATTGC+AGG + chr6.4:2391181-2391200 MS.gene47284:intron 25.0%
!!! TCTTTGATAGCTAGTTTTTA+AGG + chr6.4:2395833-2395852 MS.gene47284:intron 25.0%
!!! TGATTTTTGGTTTATACCAT+GGG + chr6.4:2392165-2392184 MS.gene47284:intron 25.0%
!!! TTAGTTATCAAGGAAGTATT+TGG - chr6.4:2394278-2394297 None:intergenic 25.0%
!!! TTGATTTTTGGTTTATACCA+TGG + chr6.4:2392164-2392183 MS.gene47284:intron 25.0%
!!! TTTATTTTGTATAAACCCGT+GGG + chr6.4:2395693-2395712 MS.gene47284:intron 25.0%
!!! TTTTGCTTGTTAGTTATTTC+CGG + chr6.4:2393776-2393795 MS.gene47284:intron 25.0%
!!! TTTTTTTTTAAGCATTGGGA+CGG + chr6.4:2393701-2393720 MS.gene47284:intron 25.0%
AAAACATATCAGTGATTCTC+TGG - chr6.4:2392780-2392799 None:intergenic 30.0%
AAAGGGAAGAAAGGATTTAA+AGG + chr6.4:2393268-2393287 MS.gene47284:CDS 30.0%
AAATAGGCTCTTTGTTAACT+AGG + chr6.4:2391575-2391594 MS.gene47284:intron 30.0%
AACAAAATCTCACTTCTCAA+AGG - chr6.4:2395958-2395977 None:intergenic 30.0%
AACATTTGTCATACAAACCA+AGG - chr6.4:2393341-2393360 None:intergenic 30.0%
AACTAACAAAAGGCTGAATA+TGG + chr6.4:2394292-2394311 MS.gene47284:intron 30.0%
AAGGGATAAAAACAAAGGTA+AGG - chr6.4:2393389-2393408 None:intergenic 30.0%
AATAGACCCATTGATACTAA+AGG + chr6.4:2393250-2393269 MS.gene47284:CDS 30.0%
AATAGGCTCTTTGTTAACTA+GGG + chr6.4:2391576-2391595 MS.gene47284:intron 30.0%
AGAAATCAAATCGGAATTTG+AGG + chr6.4:2394648-2394667 MS.gene47284:CDS 30.0%
AGGGTTTCTATATTACTTTC+TGG + chr6.4:2394181-2394200 MS.gene47284:intron 30.0%
AGTTCATTGGTAAGAAAGAA+GGG + chr6.4:2394588-2394607 MS.gene47284:CDS 30.0%
ATAGAACATCATTCATCTAC+CGG - chr6.4:2393798-2393817 None:intergenic 30.0%
ATAGACCCATTGATACTAAA+GGG + chr6.4:2393251-2393270 MS.gene47284:CDS 30.0%
ATGAATGATGTTCTATCATG+TGG + chr6.4:2393802-2393821 MS.gene47284:intron 30.0%
ATGACAACACAAAAGTAAAG+GGG - chr6.4:2392599-2392618 None:intergenic 30.0%
ATTGATACTAAAGGGAAGAA+AGG + chr6.4:2393259-2393278 MS.gene47284:CDS 30.0%
ATTGGGATATAAGGTAGTAT+AGG + chr6.4:2396335-2396354 MS.gene47284:intron 30.0%
ATTGTTTGTTTGTCAGTGAA+AGG - chr6.4:2394855-2394874 None:intergenic 30.0%
CAGTGTAGAGAAGAAAAAAA+TGG - chr6.4:2396388-2396407 None:intergenic 30.0%
CGCTCAAAATCTCAAAAAAT+TGG + chr6.4:2391085-2391104 MS.gene47284:CDS 30.0%
CTATCTAAGTCACAACATTA+AGG - chr6.4:2391999-2392018 None:intergenic 30.0%
CTGTTATAAACACTGTGATT+CGG + chr6.4:2394220-2394239 MS.gene47284:intron 30.0%
GAAAAACTGAGGTAAACTAA+AGG - chr6.4:2393408-2393427 None:intergenic 30.0%
GAATGACAACACAAAAGTAA+AGG - chr6.4:2392601-2392620 None:intergenic 30.0%
GATTATACATATTGTGCTCA+TGG + chr6.4:2392435-2392454 MS.gene47284:intron 30.0%
GGGTTTCTATATTACTTTCT+GGG + chr6.4:2394182-2394201 MS.gene47284:intron 30.0%
GGTGTTCAATTTATCAGTAT+TGG + chr6.4:2391496-2391515 MS.gene47284:intron 30.0%
GTACTCCTCACTAATTATTA+AGG - chr6.4:2392694-2392713 None:intergenic 30.0%
GTATAGCAGAGAAATCAAAT+CGG + chr6.4:2394639-2394658 MS.gene47284:CDS 30.0%
GTTGCATTATTTAAGTCGTT+TGG + chr6.4:2395803-2395822 MS.gene47284:intron 30.0%
TAAGACATATTATGACATGC+TGG + chr6.4:2393916-2393935 MS.gene47284:intron 30.0%
TAATGTTGTGACTTAGATAG+TGG + chr6.4:2391999-2392018 MS.gene47284:intron 30.0%
TATTCGTACATTAAGACAAC+GGG - chr6.4:2393599-2393618 None:intergenic 30.0%
TGAGATGTATTTCATTGGAT+TGG + chr6.4:2393015-2393034 MS.gene47284:intron 30.0%
TGAGTGGAAAAAAAATGTGT+CGG + chr6.4:2392045-2392064 MS.gene47284:intron 30.0%
TGGAGTCATTTCAATATGAT+TGG - chr6.4:2393170-2393189 None:intergenic 30.0%
TTCTTCCCTTTAGTATCAAT+GGG - chr6.4:2393259-2393278 None:intergenic 30.0%
TTTACAATTATTGAACCAGG+AGG - chr6.4:2391550-2391569 None:intergenic 30.0%
TTTACCTTCAAAATGATCTC+TGG - chr6.4:2395171-2395190 None:intergenic 30.0%
TTTCTTCCCTTTAGTATCAA+TGG - chr6.4:2393260-2393279 None:intergenic 30.0%
! AACATTAGCTTGAAAAACTG+AGG - chr6.4:2393419-2393438 None:intergenic 30.0%
! AACTGATTTAGTGTGTGTTT+GGG - chr6.4:2396052-2396071 None:intergenic 30.0%
! ATGTGATTTCTAGATAGTTG+AGG + chr6.4:2392102-2392121 MS.gene47284:intron 30.0%
! ATTTATAAGTACTGCGGAAT+TGG + chr6.4:2393092-2393111 MS.gene47284:intron 30.0%
! CAGCTTTATGTTATTATCCT+TGG + chr6.4:2392970-2392989 MS.gene47284:intron 30.0%
! CTTCCTTGATAACTAACAAA+AGG + chr6.4:2394282-2394301 MS.gene47284:intron 30.0%
! GAAAGGAATTATGTTCGTTT+TGG + chr6.4:2393678-2393697 MS.gene47284:intron 30.0%
! GCTTTTGTAGATTTAGTGAA+GGG + chr6.4:2394162-2394181 MS.gene47284:intron 30.0%
! GTTGAAGTTTTACAGTTCAT+TGG + chr6.4:2394575-2394594 MS.gene47284:CDS 30.0%
! TAACTGATTTAGTGTGTGTT+TGG - chr6.4:2396053-2396072 None:intergenic 30.0%
! TGCTTTTGTAGATTTAGTGA+AGG + chr6.4:2394161-2394180 MS.gene47284:intron 30.0%
! TTCATTGGATTGGATTTGTT+GGG + chr6.4:2393025-2393044 MS.gene47284:intron 30.0%
! TTGAGAAGTGAGATTTTGTT+GGG + chr6.4:2395958-2395977 MS.gene47284:intron 30.0%
! TTTCATTGGATTGGATTTGT+TGG + chr6.4:2393024-2393043 MS.gene47284:intron 30.0%
! TTTGAGAAGTGAGATTTTGT+TGG + chr6.4:2395957-2395976 MS.gene47284:intron 30.0%
! TTTTTGCTCCACTTACTATA+AGG + chr6.4:2394358-2394377 MS.gene47284:intron 30.0%
!! TATGTTTCGTGAGTTTTGAT+TGG + chr6.4:2392408-2392427 MS.gene47284:intron 30.0%
!! TCTAAAACAACGTTTTCAAG+TGG - chr6.4:2394133-2394152 None:intergenic 30.0%
!! TTGTAACATGTGTTACTTGA+AGG + chr6.4:2394826-2394845 MS.gene47284:intron 30.0%
!!! CATTGTTTTTGTTTGTTCAG+AGG + chr6.4:2395248-2395267 MS.gene47284:intron 30.0%
!!! CTAAAACAACGTTTTCAAGT+GGG - chr6.4:2394132-2394151 None:intergenic 30.0%
!!! GATAGCTAGTTTTTAAGGAA+GGG + chr6.4:2395838-2395857 MS.gene47284:intron 30.0%
!!! GGTTTTTGTTATTATGACAG+AGG + chr6.4:2392810-2392829 MS.gene47284:intron 30.0%
!!! GTTTATTTTGTATAAACCCG+TGG + chr6.4:2395692-2395711 MS.gene47284:intron 30.0%
!!! TGATAGCTAGTTTTTAAGGA+AGG + chr6.4:2395837-2395856 MS.gene47284:intron 30.0%
AACAAAAGGCTGAATATGGA+TGG + chr6.4:2394296-2394315 MS.gene47284:intron 35.0%
AACATGTGAATTAGGATGCA+AGG - chr6.4:2395923-2395942 None:intergenic 35.0%
AACGAGCAAATCATACTACT+CGG - chr6.4:2395786-2395805 None:intergenic 35.0%
AATCAAATCGGAATTTGAGG+AGG + chr6.4:2394651-2394670 MS.gene47284:CDS 35.0%
AATTGCATCCGACATAATGA+AGG + chr6.4:2394908-2394927 MS.gene47284:CDS 35.0%
ACAAAAGGCTGAATATGGAT+GGG + chr6.4:2394297-2394316 MS.gene47284:intron 35.0%
ACAACCTAAAGCATATGACA+AGG - chr6.4:2395101-2395120 None:intergenic 35.0%
ACACACAACTGTAATGTCTT+GGG + chr6.4:2391457-2391476 MS.gene47284:intron 35.0%
AGTACCTTCGATGTGAAAAA+TGG - chr6.4:2395601-2395620 None:intergenic 35.0%
AGTACTAGTGCTTAATGATG+TGG + chr6.4:2393456-2393475 MS.gene47284:intron 35.0%
ATACCATGTCATGATGTCAA+TGG + chr6.4:2394452-2394471 MS.gene47284:intron 35.0%
ATATATTCTTCCCAGTCCAT+TGG - chr6.4:2394882-2394901 None:intergenic 35.0%
ATATCGTTTGAACTCCATGA+AGG + chr6.4:2392932-2392951 MS.gene47284:intron 35.0%
ATCAAATCGGAATTTGAGGA+GGG + chr6.4:2394652-2394671 MS.gene47284:CDS 35.0%
ATCAATGTTGTCAAATAGCG+AGG - chr6.4:2394053-2394072 None:intergenic 35.0%
ATGTTCTATCATGTGGTTGT+TGG + chr6.4:2393809-2393828 MS.gene47284:intron 35.0%
ATTTGTCATACAAACCAAGG+CGG - chr6.4:2393338-2393357 None:intergenic 35.0%
CAAACAAACAATTCCTCCAA+TGG + chr6.4:2394863-2394882 MS.gene47284:CDS 35.0%
CAACCTAAAGCATATGACAA+GGG - chr6.4:2395100-2395119 None:intergenic 35.0%
CAGTTCATTGGTAAGAAAGA+AGG + chr6.4:2394587-2394606 MS.gene47284:CDS 35.0%
CATCATGACATGGTATTCTA+TGG - chr6.4:2394448-2394467 None:intergenic 35.0%
CCAACAAAGACGATTAGAAA+AGG - chr6.4:2392504-2392523 None:intergenic 35.0%
CCAAGGAAATGAAGAATACA+TGG - chr6.4:2395508-2395527 None:intergenic 35.0%
CCATGTATTCTTCATTTCCT+TGG + chr6.4:2395505-2395524 MS.gene47284:intron 35.0%
CGCTATTTGACAACATTGAT+GGG + chr6.4:2394053-2394072 MS.gene47284:intron 35.0%
GACAGTGACATTGAAATGAA+AGG + chr6.4:2393661-2393680 MS.gene47284:intron 35.0%
GAGTGGAAAAAAAATGTGTC+GGG + chr6.4:2392046-2392065 MS.gene47284:intron 35.0%
GCAAGTCTCCAATGATAATA+TGG - chr6.4:2394678-2394697 None:intergenic 35.0%
GCATTAGCACTATAACATAG+AGG - chr6.4:2394025-2394044 None:intergenic 35.0%
GGTACCCTTAATAATTAGTG+AGG + chr6.4:2392686-2392705 MS.gene47284:intron 35.0%
GTGAACTAGAACATTGTCTA+GGG - chr6.4:2391057-2391076 None:intergenic 35.0%
TAATGTCTTGGGTTTGAACT+CGG + chr6.4:2391468-2391487 MS.gene47284:intron 35.0%
TACTATAAGGATGATGCCAA+AGG + chr6.4:2394371-2394390 MS.gene47284:intron 35.0%
TATAGCAATGACCTATAGTG+TGG + chr6.4:2396106-2396125 MS.gene47284:intron 35.0%
TCAAATAAGCCAATCCAAAC+TGG - chr6.4:2391688-2391707 None:intergenic 35.0%
TCCTATTATTGCACACATTC+AGG - chr6.4:2395634-2395653 None:intergenic 35.0%
TCCTGAATGTGTGCAATAAT+AGG + chr6.4:2395630-2395649 MS.gene47284:intron 35.0%
TCGCTATTTGACAACATTGA+TGG + chr6.4:2394052-2394071 MS.gene47284:intron 35.0%
TGAATATGGATGGGATAGTT+AGG + chr6.4:2394306-2394325 MS.gene47284:intron 35.0%
TGGTATTGCAAGATGATAGT+TGG + chr6.4:2393829-2393848 MS.gene47284:intron 35.0%
TGTGAACTAGAACATTGTCT+AGG - chr6.4:2391058-2391077 None:intergenic 35.0%
TTAAACTGTCATCGCGATAA+CGG + chr6.4:2391601-2391620 MS.gene47284:intron 35.0%
TTACATAATATGCAGCCCAA+TGG - chr6.4:2395327-2395346 None:intergenic 35.0%
TTACTAACCTGTTCTTCACT+TGG - chr6.4:2393628-2393647 None:intergenic 35.0%
TTCTAATCGTCTTTGTTGGT+TGG + chr6.4:2392505-2392524 MS.gene47284:intron 35.0%
TTGCAAGATGATAGTTGGTT+AGG + chr6.4:2393834-2393853 MS.gene47284:intron 35.0%
TTGTTCTGTACCTTGATTCT+TGG + chr6.4:2392901-2392920 MS.gene47284:intron 35.0%
TTTGTAGATGCTCATGAACT+TGG - chr6.4:2396424-2396443 None:intergenic 35.0%
! ACATTGATTGAGTTGTCTCA+AGG - chr6.4:2392263-2392282 None:intergenic 35.0%
! ACTGATTTAGTGTGTGTTTG+GGG - chr6.4:2396051-2396070 None:intergenic 35.0%
! CAGCCTTTTGTTAGTTATCA+AGG - chr6.4:2394288-2394307 None:intergenic 35.0%
! CCTTTTCTAATCGTCTTTGT+TGG + chr6.4:2392501-2392520 MS.gene47284:intron 35.0%
! TCTTTGTTGGTTGGTATTTC+AGG + chr6.4:2392514-2392533 MS.gene47284:intron 35.0%
!! AAGAATACATGGTAATGGTG+GGG - chr6.4:2395497-2395516 None:intergenic 35.0%
!! AGAACATTGTCTAGGGTTTT+GGG - chr6.4:2391050-2391069 None:intergenic 35.0%
!! GAAGAATACATGGTAATGGT+GGG - chr6.4:2395498-2395517 None:intergenic 35.0%
!! TAGAACATTGTCTAGGGTTT+TGG - chr6.4:2391051-2391070 None:intergenic 35.0%
!! TGAAGAATACATGGTAATGG+TGG - chr6.4:2395499-2395518 None:intergenic 35.0%
!! TTAGCTTTTCTAGACAGTGA+AGG + chr6.4:2392075-2392094 MS.gene47284:intron 35.0%
!! TTTAGGTTGTTTCAAGTTCG+TGG + chr6.4:2395111-2395130 MS.gene47284:intron 35.0%
!!! AGGAAGTTTCGGTTTTAGAT+CGG + chr6.4:2393954-2393973 MS.gene47284:intron 35.0%
AAACAATTCCTCCAATGGAC+TGG + chr6.4:2394868-2394887 MS.gene47284:CDS 40.0%
AAATGCACCAAGTGAAGAAC+AGG + chr6.4:2393618-2393637 MS.gene47284:CDS 40.0%
AAGGCAAAGTGCAACTATCA+GGG - chr6.4:2392309-2392328 None:intergenic 40.0%
AATGCAGCTGATGTGATCTT+AGG + chr6.4:2391661-2391680 MS.gene47284:intron 40.0%
AATGTCTTGGGTTTGAACTC+GGG + chr6.4:2391469-2391488 MS.gene47284:intron 40.0%
ACCTTCAAAATGATCTCTGG+AGG - chr6.4:2395168-2395187 None:intergenic 40.0%
AGCTTCGGAACATGTGAATT+AGG - chr6.4:2395931-2395950 None:intergenic 40.0%
AGTCCATTGACATCATGACA+TGG - chr6.4:2394458-2394477 None:intergenic 40.0%
AGTGTTTATAACAGAGACCG+CGG - chr6.4:2394214-2394233 None:intergenic 40.0%
ATCAGCTACTTCATACTCCA+AGG - chr6.4:2395525-2395544 None:intergenic 40.0%
ATCTTAGGACCAGTTTGGAT+TGG + chr6.4:2391676-2391695 MS.gene47284:intron 40.0%
ATGTCTTCTGCATGAACTCA+GGG + chr6.4:2395394-2395413 MS.gene47284:intron 40.0%
ATGTGATCTTAGGACCAGTT+TGG + chr6.4:2391671-2391690 MS.gene47284:intron 40.0%
CACACACAACTGTAATGTCT+TGG + chr6.4:2391456-2391475 MS.gene47284:intron 40.0%
CATGACATGGTATTCTATGG+TGG - chr6.4:2394445-2394464 None:intergenic 40.0%
CTATGTTCCTGGTTCAATGA+GGG - chr6.4:2395558-2395577 None:intergenic 40.0%
GAAACTCGGAAAGGAAGTTT+CGG + chr6.4:2393943-2393962 MS.gene47284:intron 40.0%
GAACAAATCACTATCGTCTG+TGG - chr6.4:2394089-2394108 None:intergenic 40.0%
GATAGGGACTTGGGTATTAT+GGG + chr6.4:2395741-2395760 MS.gene47284:intron 40.0%
GCTCTGTTCCTTCATTATGT+CGG - chr6.4:2394919-2394938 None:intergenic 40.0%
GGCATAGTGAACTGAATCTT+TGG + chr6.4:2393046-2393065 MS.gene47284:intron 40.0%
GGCATCATCCTTATAGTAAG+TGG - chr6.4:2394369-2394388 None:intergenic 40.0%
GTACCTCGACAGAAAAGAAA+AGG + chr6.4:2392752-2392771 MS.gene47284:intron 40.0%
TAAGGCAAAGTGCAACTATC+AGG - chr6.4:2392310-2392329 None:intergenic 40.0%
TATCTCCACGACTGTAACTA+AGG - chr6.4:2391969-2391988 None:intergenic 40.0%
TATGTTCCTGGTTCAATGAG+GGG - chr6.4:2395557-2395576 None:intergenic 40.0%
TCCTTCCTCATTGCAACATT+TGG + chr6.4:2396444-2396463 MS.gene47284:CDS 40.0%
TCTCCCTTGTCATATGCTTT+AGG + chr6.4:2395094-2395113 MS.gene47284:intron 40.0%
TGAAGTTGGAGAATAGGACA+TGG + chr6.4:2392537-2392556 MS.gene47284:CDS 40.0%
TGATAGGGACTTGGGTATTA+TGG + chr6.4:2395740-2395759 MS.gene47284:intron 40.0%
TGGAGCAAAAAAAGTAGAGC+AGG - chr6.4:2394349-2394368 None:intergenic 40.0%
TGGCAAGAAAACCCTAATCA+TGG + chr6.4:2391253-2391272 MS.gene47284:CDS 40.0%
TGTATTTCTCCATCGTTCTG+CGG - chr6.4:2393513-2393532 None:intergenic 40.0%
TTCAGGTGAAGTTGGAGAAT+AGG + chr6.4:2392531-2392550 MS.gene47284:intron 40.0%
! AAAACAACCTTTTCAGCACC+AGG - chr6.4:2391302-2391321 None:intergenic 40.0%
! AACAATTCCTCCAATGGACT+GGG + chr6.4:2394869-2394888 MS.gene47284:CDS 40.0%
! AGTGATTGTCACTTCGTCTA+TGG - chr6.4:2391424-2391443 None:intergenic 40.0%
! ATGCCAAGTGCAAACCTTTT+TGG - chr6.4:2394942-2394961 None:intergenic 40.0%
! CAACATTGATGGGCATATCA+CGG + chr6.4:2394063-2394082 MS.gene47284:intron 40.0%
! GAACCTTTTCTTTTCTGTCG+AGG - chr6.4:2392758-2392777 None:intergenic 40.0%
! GAAGTGAGATTTTGTTGGGA+TGG + chr6.4:2395962-2395981 MS.gene47284:intron 40.0%
! GACATGCTGGTTAAGAAACT+CGG + chr6.4:2393929-2393948 MS.gene47284:intron 40.0%
! GTTGGTATTTCAGGTGAAGT+TGG + chr6.4:2392523-2392542 MS.gene47284:intron 40.0%
! TCCTCCAGAGATCATTTTGA+AGG + chr6.4:2395164-2395183 MS.gene47284:CDS 40.0%
! TGCCAAGTGCAAACCTTTTT+GGG - chr6.4:2394941-2394960 None:intergenic 40.0%
!! AGAATACATGGTAATGGTGG+GGG - chr6.4:2395496-2395515 None:intergenic 40.0%
!! ATGATGCCAAAGGCATTCAT+AGG + chr6.4:2394381-2394400 MS.gene47284:intron 40.0%
!! CAAATCATACTACTCGGTGT+GGG - chr6.4:2395780-2395799 None:intergenic 40.0%
!! TGTCCTCATTTGCTGTTCTA+TGG + chr6.4:2391218-2391237 MS.gene47284:CDS 40.0%
!!! AAGGCCATTTTTCACATCGA+AGG + chr6.4:2395594-2395613 MS.gene47284:CDS 40.0%
!!! ATTGGGACGGTTGTTTTTTC+TGG + chr6.4:2393714-2393733 MS.gene47284:intron 40.0%
!!! TTTTTTCCCCTCATTGAACC+AGG + chr6.4:2395548-2395567 MS.gene47284:intron 40.0%
AAATAGGTCTTGGTACCTCG+AGG + chr6.4:2396226-2396245 MS.gene47284:intron 45.0%
AAGCTTGTGGAGCTTACTGT+TGG - chr6.4:2394706-2394725 None:intergenic 45.0%
AATAGGTCTTGGTACCTCGA+GGG + chr6.4:2396227-2396246 MS.gene47284:intron 45.0%
ACAACGATTGAGTTCTCCCA+TGG - chr6.4:2392184-2392203 None:intergenic 45.0%
ACAAGAGTCGACAACACGAT+CGG - chr6.4:2395041-2395060 None:intergenic 45.0%
ACGAATGTTGTGCTCCTTCA+TGG - chr6.4:2392949-2392968 None:intergenic 45.0%
ACTGTAACTAAGGCCCTGTT+TGG - chr6.4:2391959-2391978 None:intergenic 45.0%
AGCCCAAAAAGGTTTGCACT+TGG + chr6.4:2394936-2394955 MS.gene47284:intron 45.0%
ATATCTTAGTGCTTCCGCCT+TGG + chr6.4:2393321-2393340 MS.gene47284:intron 45.0%
ATGGGGATTGATAGGGACTT+GGG + chr6.4:2395732-2395751 MS.gene47284:intron 45.0%
ATTGAACCAGGAGGTCCATA+AGG - chr6.4:2391541-2391560 None:intergenic 45.0%
CAAGGGAGATGAAAGATGCA+TGG - chr6.4:2395083-2395102 None:intergenic 45.0%
CAATGACCTATAGTGTGGCA+CGG + chr6.4:2396111-2396130 MS.gene47284:intron 45.0%
CACGAGTTTCAAATCGATCC+TGG - chr6.4:2396170-2396189 None:intergenic 45.0%
CAGTTGTGTGTGTGAGTTTC+AGG - chr6.4:2391448-2391467 None:intergenic 45.0%
CCTATGTTCCTGGTTCAATG+AGG - chr6.4:2395559-2395578 None:intergenic 45.0%
CCTCATTGAACCAGGAACAT+AGG + chr6.4:2395556-2395575 MS.gene47284:intron 45.0%
CGGAATCCTATGAATGCCTT+TGG - chr6.4:2394390-2394409 None:intergenic 45.0%
CTCTACACTGACAGCATTTG+TGG + chr6.4:2396398-2396417 MS.gene47284:intron 45.0%
CTTCTCAAAGGATGCAGCTT+CGG - chr6.4:2395946-2395965 None:intergenic 45.0%
GAAAAATGGCCTTCTGTCCA+AGG - chr6.4:2395587-2395606 None:intergenic 45.0%
GAATTCTTCTACTCGCCATG+GGG + chr6.4:2395715-2395734 MS.gene47284:intron 45.0%
GAGGAGGGCCATATTATCAT+TGG + chr6.4:2394667-2394686 MS.gene47284:CDS 45.0%
GAGTAGGTTCCTTAAACACG+TGG + chr6.4:2396143-2396162 MS.gene47284:intron 45.0%
GATGTCTTCTGCATGAACTC+AGG + chr6.4:2395393-2395412 MS.gene47284:intron 45.0%
GCCAAATGTTGCAATGAGGA+AGG - chr6.4:2396448-2396467 None:intergenic 45.0%
GCTGGTTAAGAAACTCGGAA+AGG + chr6.4:2393934-2393953 MS.gene47284:intron 45.0%
GGAATTCTTCTACTCGCCAT+GGG + chr6.4:2395714-2395733 MS.gene47284:intron 45.0%
GGACCATAGAACAGCAAATG+AGG - chr6.4:2391224-2391243 None:intergenic 45.0%
GGGAGTTTCTATGATTTCGC+TGG + chr6.4:2392665-2392684 MS.gene47284:intron 45.0%
GTACATTAAGACAACGGGAG+CGG - chr6.4:2393594-2393613 None:intergenic 45.0%
GTCAATACGTTGCTTGTGAG+TGG + chr6.4:2392029-2392048 MS.gene47284:intron 45.0%
TATTCTTCCCAGTCCATTGG+AGG - chr6.4:2394879-2394898 None:intergenic 45.0%
TCAAACTATTCCCCCAGAAG+CGG - chr6.4:2392998-2393017 None:intergenic 45.0%
TGAAGGAACAGAGCCCAAAA+AGG + chr6.4:2394925-2394944 MS.gene47284:CDS 45.0%
TTGGCATTGTCAGTTGAGCT+AGG + chr6.4:2391515-2391534 MS.gene47284:intron 45.0%
! AGTACTGCGGAATTGGTTTC+AGG + chr6.4:2393099-2393118 MS.gene47284:intron 45.0%
! GCAAATCATACTACTCGGTG+TGG - chr6.4:2395781-2395800 None:intergenic 45.0%
! GTCGAGGTACTAGTTACACT+TGG - chr6.4:2392742-2392761 None:intergenic 45.0%
! TTGCTGTTCTATGGTCCTTC+AGG + chr6.4:2391227-2391246 MS.gene47284:CDS 45.0%
!! AGGCGGAAGCACTAAGATAT+TGG - chr6.4:2393321-2393340 None:intergenic 45.0%
!! GAATACATGGTAATGGTGGG+GGG - chr6.4:2395495-2395514 None:intergenic 45.0%
!!! GACGGTTGTTTTTTCTGGCA+GGG + chr6.4:2393719-2393738 MS.gene47284:intron 45.0%
!! ATAATTGTAAATATAAAAAT+AGG + chr6.4:2391559-2391578 MS.gene47284:intron 5.0%
ACATTCTCTCCGCAGAACGA+TGG + chr6.4:2393501-2393520 MS.gene47284:CDS 50.0%
ACTCGCCATGGGGATTGATA+GGG + chr6.4:2395725-2395744 MS.gene47284:intron 50.0%
ATACGAGCAGCGAAACCAGA+AGG - chr6.4:2394623-2394642 None:intergenic 50.0%
ATTAAGACAACGGGAGCGGA+TGG - chr6.4:2393590-2393609 None:intergenic 50.0%
ATTTGTCTCTGCTCTCGACC+AGG + chr6.4:2396250-2396269 MS.gene47284:intron 50.0%
CAAGAGTCGACAACACGATC+GGG - chr6.4:2395040-2395059 None:intergenic 50.0%
CAAGTCCCTATCAATCCCCA+TGG - chr6.4:2395733-2395752 None:intergenic 50.0%
CACCAGGTCCAAACATTTGG+CGG - chr6.4:2391286-2391305 None:intergenic 50.0%
CAGCACCAGGTCCAAACATT+TGG - chr6.4:2391289-2391308 None:intergenic 50.0%
CATGGGGATTGATAGGGACT+TGG + chr6.4:2395731-2395750 MS.gene47284:intron 50.0%
CGTTCTGCGGAGAGAATGTT+GGG - chr6.4:2393500-2393519 None:intergenic 50.0%
GAAATGACTCCAAGCGATGC+AGG + chr6.4:2393178-2393197 MS.gene47284:CDS 50.0%
GAAGGGCTACAACTTCCTTC+TGG + chr6.4:2394605-2394624 MS.gene47284:CDS 50.0%
GATCCTGGACCACGTGTTTA+AGG - chr6.4:2396155-2396174 None:intergenic 50.0%
GCGAGTAGAAGAATTCCCAC+GGG - chr6.4:2395711-2395730 None:intergenic 50.0%
GCGGAGAAGAGCCATGATTA+GGG - chr6.4:2391267-2391286 None:intergenic 50.0%
GCTCTTCTCCGCCAAATGTT+TGG + chr6.4:2391275-2391294 MS.gene47284:CDS 50.0%
GGCGAGTAGAAGAATTCCCA+CGG - chr6.4:2395712-2395731 None:intergenic 50.0%
GGGAATTCTTCTACTCGCCA+TGG + chr6.4:2395713-2395732 MS.gene47284:intron 50.0%
GTCAGTTGAGCTAGGCCTTA+TGG + chr6.4:2391523-2391542 MS.gene47284:intron 50.0%
GTGGAGCTTACTGTTGGACA+CGG - chr6.4:2394700-2394719 None:intergenic 50.0%
GTTCCTTAAACACGTGGTCC+AGG + chr6.4:2396149-2396168 MS.gene47284:intron 50.0%
TACTCGCCATGGGGATTGAT+AGG + chr6.4:2395724-2395743 MS.gene47284:intron 50.0%
TAGATCGGCGTTGTCAACTG+CGG + chr6.4:2393969-2393988 MS.gene47284:intron 50.0%
TCGTTCTGCGGAGAGAATGT+TGG - chr6.4:2393501-2393520 None:intergenic 50.0%
TTCTATGGTCCTTCAGGCTC+TGG + chr6.4:2391233-2391252 MS.gene47284:CDS 50.0%
TTGGGTTTGAACTCGGGTGA+AGG + chr6.4:2391475-2391494 MS.gene47284:intron 50.0%
TTTGTCTCTGCTCTCGACCA+GGG + chr6.4:2396251-2396270 MS.gene47284:intron 50.0%
! ATTGGTTTCAGGCTGGGAGT+AGG + chr6.4:2393110-2393129 MS.gene47284:intron 50.0%
! GGCTGCTTTATGCGCTATTG+AGG + chr6.4:2395269-2395288 MS.gene47284:CDS 50.0%
! GTTTGGACCTGGTGCTGAAA+AGG + chr6.4:2391292-2391311 MS.gene47284:CDS 50.0%
! GTTTTCTTGCCAGAGCCTGA+AGG - chr6.4:2391245-2391264 None:intergenic 50.0%
! TGCGGAATTGGTTTCAGGCT+GGG + chr6.4:2393104-2393123 MS.gene47284:intron 50.0%
!! ATTATCCTTGGTGCCGCTTC+TGG + chr6.4:2392982-2393001 MS.gene47284:intron 50.0%
!! TACTTTCTGGGATTCAGCCG+CGG + chr6.4:2394194-2394213 MS.gene47284:intron 50.0%
!! TTATCCTTGGTGCCGCTTCT+GGG + chr6.4:2392983-2393002 MS.gene47284:intron 50.0%
!!! GGACGGTTGTTTTTTCTGGC+AGG + chr6.4:2393718-2393737 MS.gene47284:intron 50.0%
AGATCGGCGTTGTCAACTGC+GGG + chr6.4:2393970-2393989 MS.gene47284:intron 55.0%
AGTCGACAACACGATCGGGT+AGG - chr6.4:2395036-2395055 None:intergenic 55.0%
CAAGGCGCATCCTATGTTCC+TGG - chr6.4:2395569-2395588 None:intergenic 55.0%
CAGGAACATAGGATGCGCCT+TGG + chr6.4:2395567-2395586 MS.gene47284:intron 55.0%
CAGGGCCTTAGTTACAGTCG+TGG + chr6.4:2391961-2391980 MS.gene47284:intron 55.0%
CTCCGCCAAATGTTTGGACC+TGG + chr6.4:2391281-2391300 MS.gene47284:CDS 55.0%
CTGCTCTCGACCAGGGAATA+CGG + chr6.4:2396258-2396277 MS.gene47284:intron 55.0%
GACCTATAGTGTGGCACGGT+TGG + chr6.4:2396115-2396134 MS.gene47284:intron 55.0%
GAGCAGAGACAAATCCCTCG+AGG - chr6.4:2396244-2396263 None:intergenic 55.0%
GGCGGAGAAGAGCCATGATT+AGG - chr6.4:2391268-2391287 None:intergenic 55.0%
TAGGATGCGCCTTGGACAGA+AGG + chr6.4:2395575-2395594 MS.gene47284:CDS 55.0%
TCCAAGCGATGCAGGCTTTC+AGG + chr6.4:2393186-2393205 MS.gene47284:CDS 55.0%
TCCTGAAAGCCTGCATCGCT+TGG - chr6.4:2393190-2393209 None:intergenic 55.0%
TGCCAACCGTGCCACACTAT+AGG - chr6.4:2396120-2396139 None:intergenic 55.0%
! CTCGGTGTGGGACTTAGACA+GGG - chr6.4:2395768-2395787 None:intergenic 55.0%
! CTGCGGAATTGGTTTCAGGC+TGG + chr6.4:2393103-2393122 MS.gene47284:intron 55.0%
!! ACATGGTAATGGTGGGGGGA+GGG - chr6.4:2395491-2395510 None:intergenic 55.0%
!! ACTCGGTGTGGGACTTAGAC+AGG - chr6.4:2395769-2395788 None:intergenic 55.0%
!! TACATGGTAATGGTGGGGGG+AGG - chr6.4:2395492-2395511 None:intergenic 55.0%
!! TATCCTTGGTGCCGCTTCTG+GGG + chr6.4:2392984-2393003 MS.gene47284:intron 55.0%
ACACGCAACGCCGTATTCCC+TGG - chr6.4:2396271-2396290 None:intergenic 60.0%
GGCACGGTTGGCAGATGAGT+AGG + chr6.4:2396127-2396146 MS.gene47284:intron 60.0%
! GCTAGGCCTTATGGACCTCC+TGG + chr6.4:2391532-2391551 MS.gene47284:intron 60.0%
!! ATCCTTGGTGCCGCTTCTGG+GGG + chr6.4:2392985-2393004 MS.gene47284:intron 60.0%
!! ATGGTAATGGTGGGGGGAGG+GGG - chr6.4:2395489-2395508 None:intergenic 60.0%
!! CATGGTAATGGTGGGGGGAG+GGG - chr6.4:2395490-2395509 None:intergenic 60.0%
TTCCCCCAGAAGCGGCACCA+AGG - chr6.4:2392990-2393009 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 2391023 2396470 2391023 ID=MS.gene47284
chr6.4 mRNA 2391023 2396470 2391023 ID=MS.gene47284.t1;Parent=MS.gene47284
chr6.4 exon 2391023 2391106 2391023 ID=MS.gene47284.t1.exon1;Parent=MS.gene47284.t1
chr6.4 CDS 2391023 2391106 2391023 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
chr6.4 exon 2391203 2391313 2391203 ID=MS.gene47284.t1.exon2;Parent=MS.gene47284.t1
chr6.4 CDS 2391203 2391313 2391203 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
chr6.4 exon 2392536 2392568 2392536 ID=MS.gene47284.t1.exon3;Parent=MS.gene47284.t1
chr6.4 CDS 2392536 2392568 2392536 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
chr6.4 exon 2393121 2393289 2393121 ID=MS.gene47284.t1.exon4;Parent=MS.gene47284.t1
chr6.4 CDS 2393121 2393289 2393121 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
chr6.4 exon 2393458 2393639 2393458 ID=MS.gene47284.t1.exon5;Parent=MS.gene47284.t1
chr6.4 CDS 2393458 2393639 2393458 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
chr6.4 exon 2394572 2394708 2394572 ID=MS.gene47284.t1.exon6;Parent=MS.gene47284.t1
chr6.4 CDS 2394572 2394708 2394572 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
chr6.4 exon 2394848 2394946 2394848 ID=MS.gene47284.t1.exon7;Parent=MS.gene47284.t1
chr6.4 CDS 2394848 2394946 2394848 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
chr6.4 exon 2395116 2395185 2395116 ID=MS.gene47284.t1.exon8;Parent=MS.gene47284.t1
chr6.4 CDS 2395116 2395185 2395116 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
chr6.4 exon 2395268 2395342 2395268 ID=MS.gene47284.t1.exon9;Parent=MS.gene47284.t1
chr6.4 CDS 2395268 2395342 2395268 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
chr6.4 exon 2395570 2395615 2395570 ID=MS.gene47284.t1.exon10;Parent=MS.gene47284.t1
chr6.4 CDS 2395570 2395615 2395570 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
chr6.4 exon 2396412 2396470 2396412 ID=MS.gene47284.t1.exon11;Parent=MS.gene47284.t1
chr6.4 CDS 2396412 2396470 2396412 ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1
Gene Sequence

>MS.gene47284

ATGTTGTGGGTAGACAAGTATCGTCCCAAAACCCTAGACAATGTTCTAGTTCACAACGATACCGCTCAAAATCTCAAAAAATTGGTAATTTTTCTCACACATTCAATTTCAACTTCCTTAATTGTGTTTCTTATACAACATTCTTGTAATTTTTGTTAGGGTTTTTTTTTTTTATTGCAGGTTTCGGAACATGATTGTCCTCATTTGCTGTTCTATGGTCCTTCAGGCTCTGGCAAGAAAACCCTAATCATGGCTCTTCTCCGCCAAATGTTTGGACCTGGTGCTGAAAAGGTTGTTTTTTTGTTACTTTTCTGTGTGTTTGTTTCAATTAGAATGTTTTTTTTTTTTTAAAAAAAAATAAAAAGTACACACTTGGGTTCAATTTTATTTTTTTGGGTCCATAGACGAAGTGACAATCACTACCTGAAACTCACACACACAACTGTAATGTCTTGGGTTTGAACTCGGGTGAAGGTGTTCAATTTATCAGTATTGGCATTGTCAGTTGAGCTAGGCCTTATGGACCTCCTGGTTCAATAATTGTAAATATAAAAATAGGCTCTTTGTTAACTAGGGTTTTAAACTGTCATCGCGATAACGGTGACATGATTTTTTAATATTACATAGAATTGTTGTCAAATGCAGCTGATGTGATCTTAGGACCAGTTTGGATTGGCTTATTTGAGTTTATCTACTGAGATAAGTTTTGTGAGACTATTTGGAAGAACTTATGAAAACAGCTTACGACGTTTCTGTTCATAAGCTGTTTTCAACTTGTTTTCGTAAGTTCTCTAAGATAGCTTATGAAAAGAGTTTGTAGATTATACAAAAGCAATTTAACTTTATTGTACCTTTGCTATATAAATAACTTATACATAAGTGTTTATCATGATAAGCGTTTGTGCTATAAGCTGCAAATAAGTTTTTTTTTATCCAAACAGGGCCTTAGTTACAGTCGTGGAGATATAAAAAACCTTAATGTTGTGACTTAGATAGTGGACTTAATGTCAATACGTTGCTTGTGAGTGGAAAAAAAATGTGTCGGGAGAGTCTTAGCTTTTCTAGACAGTGAAGGTCTAATGTGATTTCTAGATAGTTGAGGTTCTAGACTAGAAAATTTCTAGATATAGAAGGAATGTAATTGATTTTTGGTTTATACCATGGGAGAACTCAATCGTTGTCTAATTTTAAGATAAAATTGAAGTTCAAACTTATATTAGTTGGTTTTTGGTTTATACCTTGAGACAACTCAATCAATGTGCAATTTATATTTTTGGTTTATACCCTGATAGTTGCACTTTGCCTTAGCATTACTAAAATAATCTTTAAGATAAAATTGAAGTGATTTTAGTAAGTTGTTTATTGTCTGTTTCAGTTGTTGTTGTTATGTTTCGTGAGTTTTGATTGGTTGTGATTATACATATTGTGCTCATGGTTGAATTATACTGTTGTTTACTTCTTGGTGCTGTAATTCGTGTCCTTTTCTAATCGTCTTTGTTGGTTGGTATTTCAGGTGAAGTTGGAGAATAGGACATGGAAAGTTGATGTAAGCTTCATTCTTTCTCAATCTGTACCCCTTTACTTTTGTGTTGTCATTCTAAACTTGTGAGTTTCCAGAAACACTATTAAATTTGAACGGTTTGGGAGTTTCTATGATTTCGCTGGTACCCTTAATAATTAGTGAGGAGTACATGACTGAATACTGAACACTTATTGCCAAGTGTAACTAGTACCTCGACAGAAAAGAAAAGGTTCCAGAGAATCACTGATATGTTTTTAAGATATACGGTTTTTGTTATTATGACAGAGGTGCTTGTTTATATACATGACTCAAAGTGAATGCTTTTAGTTTAGCAAACACAAACATTTATGTAGATTTTGTTCTGTACCTTGATTCTTGGATATATCTATATCGTTTGAACTCCATGAAGGAGCACAACATTCGTTCAGCTTTATGTTATTATCCTTGGTGCCGCTTCTGGGGGAATAGTTTGAGATGTATTTCATTGGATTGGATTTGTTGGGCATAGTGAACTGAATCTTTGGTTTTTATTTAGCTATGCATTTTTATTTATAAGTACTGCGGAATTGGTTTCAGGCTGGGAGTAGGTCGATTGATTTAGAGTTGACGACATTATCAAGTGCCAATCATATTGAAATGACTCCAAGCGATGCAGGCTTTCAGGACAGATACATTGTTCAAGAAATAATCAAAGAAATGGCTAAAAATAGACCCATTGATACTAAAGGGAAGAAAGGATTTAAAGGTAACAAACTTGCTGTCTTTGTTTTCAACCAATATCTTAGTGCTTCCGCCTTGGTTTGTATGACAAATGTTAGTAACTTAGGACTACAAGCATTCGCCTTACCTTTGTTTTTATCCCTTTAGTTTACCTCAGTTTTTCAAGCTAATGTTTGATTTTGTTCTCTTTTAGTACTAGTGCTTAATGATGTGGACAAACTCTCTAGAGAAGCCCAACATTCTCTCCGCAGAACGATGGAGAAATACAGCGCTTATTGCAGATTAATTTTATGTTGCAATAGTTCTTCAAGAGTCACAGAAGCCATCCGCTCCCGTTGTCTTAATGTACGAATAAATGCACCAAGTGAAGAACAGGTTAGTAAATTTTAAATCTGTGACAGTGACATTGAAATGAAAGGAATTATGTTCGTTTTGGTTTTTTTTTAAGCATTGGGACGGTTGTTTTTTCTGGCAGGGTTGTTAGTAGTAAGTTGTATTGTTTTCCATATTATTTTGCTTGTTAGTTATTTCCGGTAGATGAATGATGTTCTATCATGTGGTTGTTGGTATTGCAAGATGATAGTTGGTTAGGTCCATACTTCTAAATTTTTTATTTTTGTTTTTTTCAATTTGTTAGGAGTTATTCCATGTTAAGACATATTATGACATGCTGGTTAAGAAACTCGGAAAGGAAGTTTCGGTTTTAGATCGGCGTTGTCAACTGCGGGTCAAATAAAATAGCAATTTTGTTCTAATTCCTCTATGTTATAGTGCTAATGCTATAGCCTCGCTATTTGACAACATTGATGGGCATATCACGGCCACAGACGATAGTGATTTGTTCATATTTGGCTATGCTTTAGTCCCACTTGAAAACGTTGTTTTAGATTATAGAATGCTTTTGTAGATTTAGTGAAGGGTTTCTATATTACTTTCTGGGATTCAGCCGCGGTCTCTGTTATAAACACTGTGATTCGGCCAAGTTCTCTTTTATAAACATTGTGGTTAGGCCAAATACTTCCTTGATAACTAACAAAAGGCTGAATATGGATGGGATAGTTAGGTTATTTTTGACTCTGATCCTGCTCTACTTTTTTTGCTCCACTTACTATAAGGATGATGCCAAAGGCATTCATAGGATTCCGAACTTTCTGTATAATATTTATCAGATGAGCATCCACCATAGAATACCATGTCATGATGTCAATGGACTATATTTTGTATACTTTCTACTCATATTGTCTTGCATATCCATTTTATGAGTTGAATGTTCATCTTTACTAAATATTTGGAGATCTATGTGGCAGATTGTTGAAGTTTTACAGTTCATTGGTAAGAAAGAAGGGCTACAACTTCCTTCTGGTTTCGCTGCTCGTATAGCAGAGAAATCAAATCGGAATTTGAGGAGGGCCATATTATCATTGGAGACTTGCCGTGTCCAACAGTAAGCTCCACAAGCTTATCATTTAATATGTGATGCATAATCTCAGATCTTCAATCTTCATTTACTTTTCAAAGATTTGTTTTATGGATAACTATTAACAGCTATCTCTTTTGCATGTTGTAACATGTGTTACTTGAAGGTATCCTTTCACTGACAAACAAACAATTCCTCCAATGGACTGGGAAGAATATATTTCAGAAATTGCATCCGACATAATGAAGGAACAGAGCCCAAAAAGGTTTGCACTTGGCATATAGTTTTCTGATTTTTCATGATAAACAAAATGTGATGCTGAACCTTAAAGTTGATAAGTTTTATGAATTGCCTACCCGATCGTGTTGTCGACTCTTGTTGTTTCACTTACTTACGTGCCATGCATCTTTCATCTCCCTTGTCATATGCTTTAGGTTGTTTCAAGTTCGTGGAAAGCTGTATGAGCTTCTAATCAATTGCATTCCTCCAGAGATCATTTTGAAGGTAAATGTGTTGATTTACGATGTCTCTAAGTAAGATATTTTGATCTTTATACTTGAATTTGACATTGTTTTTGTTTGTTCAGAGGCTGCTTTATGCGCTATTGAGGAAACTTGATGCAGAACTGAAGCATGAAGTCTGCCATTGGGCTGCATATTATGTAAGTGCATTATTTATATGATATTTCATTTCAGAATCTGGAATATATATGATGTCTTCTGCATGAACTCAGGGCCTACTGTATTTGATTTACAATTTTTAGTGTACAAGTATTTGTGATATTCTTTTCTTTTTATATATGCACCCCCTCCCCCCACCATTACCATGTATTCTTCATTTCCTTGGAGTATGAAGTAGCTGATTCTTTTTTTCCCCTCATTGAACCAGGAACATAGGATGCGCCTTGGACAGAAGGCCATTTTTCACATCGAAGGTACTTTGAATTCGTCCTGAATGTGTGCAATAATAGGATTTTTTTTTACAGATATTTATGAGCTTGTGCGCTGTCTGTTTATTTTGTATAAACCCGTGGGAATTCTTCTACTCGCCATGGGGATTGATAGGGACTTGGGTATTATGGGACCCTGTCTAAGTCCCACACCGAGTAGTATGATTTGCTCGTTGCATTATTTAAGTCGTTTGGTTCTTCCTCTTTGATAGCTAGTTTTTAAGGAAGGGTTCCCAAATACTTTGATACTTATCAGGGACTCATCAGTCTAGACGCGTGTTTGTGTATGCCTTGCATCCTAATTCACATGTTCCGAAGCTGCATCCTTTGAGAAGTGAGATTTTGTTGGGATGGCTTCGATGCTAGTTTAGTGATGTTTTTGCTTCTTGAAACACATGCAGTGTGCATCGAACACTACCCCAAACACACACTAAATCAGTTAATATCAACAGGTTTATAAAAAGTAAATAAGGGATATAGCAATGACCTATAGTGTGGCACGGTTGGCAGATGAGTAGGTTCCTTAAACACGTGGTCCAGGATCGATTTGAAACTCGTGTATAGAAGAACATTTGTTGTTAAAGATTAATTCTTTAAATAGGTCTTGGTACCTCGAGGGATTTGTCTCTGCTCTCGACCAGGGAATACGGCGTTGCGTGTTCATCCAAAAAAGAGATTATAGAGTTTATACAAAGTAGTTATAGATTGGGATATAAGGTAGTATAGGTCTATGCATTATCTAATTGCATGCTGACCATTTTTTTCTTCTCTACACTGACAGCATTTGTGGCCAAGTTCATGAGCATCTACAAATCCTTCCTCATTGCAACATTTGGCTGA

Protein sequence

>MS.gene47284.t1

MLWVDKYRPKTLDNVLVHNDTAQNLKKLVSEHDCPHLLFYGPSGSGKKTLIMALLRQMFGPGAEKVKLENRTWKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSGFAARIAEKSNRNLRRAILSLETCRVQQYPFTDKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYALLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG