Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47284.t1 | XP_013451525.1 | 98 | 354 | 7 | 0 | 1 | 354 | 1 | 354 | 5.70E-196 | 693.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47284.t1 | Q8VXX4 | 85.0 | 354 | 53 | 0 | 1 | 354 | 1 | 354 | 8.6e-177 | 620.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47284.t1 | A0A072U8X4 | 98.0 | 354 | 7 | 0 | 1 | 354 | 1 | 354 | 4.1e-196 | 693.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47284.t1 | MTR_6g027590 | 98.023 | 354 | 7 | 0 | 1 | 354 | 1 | 354 | 0.0 | 724 |
MS.gene47284.t1 | MTR_6g471010 | 95.480 | 354 | 16 | 0 | 1 | 354 | 1 | 354 | 0.0 | 712 |
MS.gene47284.t1 | MTR_5g020810 | 37.143 | 350 | 201 | 4 | 2 | 346 | 413 | 748 | 9.97e-78 | 253 |
MS.gene47284.t1 | MTR_3g118160 | 31.117 | 376 | 225 | 8 | 2 | 347 | 421 | 792 | 2.33e-47 | 171 |
MS.gene47284.t1 | MTR_3g088120 | 24.784 | 347 | 218 | 6 | 2 | 341 | 33 | 343 | 2.76e-33 | 127 |
MS.gene47284.t1 | MTR_3g088380 | 32.218 | 239 | 125 | 4 | 3 | 234 | 11 | 219 | 3.45e-33 | 126 |
MS.gene47284.t1 | MTR_3g088120 | 26.531 | 294 | 178 | 5 | 2 | 288 | 33 | 295 | 2.88e-32 | 122 |
MS.gene47284.t1 | MTR_4g102860 | 29.310 | 232 | 131 | 5 | 3 | 233 | 17 | 216 | 9.81e-26 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47284.t1 | AT5G27740 | 85.028 | 354 | 53 | 0 | 1 | 354 | 1 | 354 | 0.0 | 650 |
MS.gene47284.t1 | AT1G21690 | 32.636 | 239 | 124 | 4 | 3 | 234 | 11 | 219 | 1.16e-32 | 125 |
MS.gene47284.t1 | AT1G21690 | 32.636 | 239 | 124 | 4 | 3 | 234 | 11 | 219 | 1.37e-32 | 124 |
MS.gene47284.t1 | AT1G21690 | 31.799 | 239 | 119 | 4 | 3 | 234 | 11 | 212 | 2.03e-30 | 118 |
MS.gene47284.t1 | AT1G77470 | 27.642 | 246 | 146 | 4 | 3 | 247 | 41 | 255 | 2.35e-29 | 116 |
MS.gene47284.t1 | AT1G21690 | 32.636 | 239 | 112 | 6 | 3 | 234 | 11 | 207 | 2.72e-29 | 115 |
MS.gene47284.t1 | AT1G63160 | 27.530 | 247 | 145 | 6 | 3 | 248 | 17 | 230 | 2.99e-24 | 102 |
Find 79 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAAGCGATGCAGGCTTTC+AGG | 0.177682 | 6.4:+2393186 | MS.gene47284:CDS |
TAGAACATTGTCTAGGGTTT+TGG | 0.211566 | 6.4:-2391048 | None:intergenic |
TGTCCTCATTTGCTGTTCTA+TGG | 0.252413 | 6.4:+2391218 | MS.gene47284:CDS |
TCCTTCCTCATTGCAACATT+TGG | 0.283181 | 6.4:+2396444 | MS.gene47284:CDS |
TTGCTGTTCTATGGTCCTTC+AGG | 0.286128 | 6.4:+2391227 | MS.gene47284:CDS |
CAGCACCAGGTCCAAACATT+TGG | 0.316754 | 6.4:-2391286 | None:intergenic |
TTTCTTCCCTTTAGTATCAA+TGG | 0.323241 | 6.4:-2393257 | None:intergenic |
GCAAGTCTCCAATGATAATA+TGG | 0.323719 | 6.4:-2394675 | None:intergenic |
AAAGGGAAGAAAGGATTTAA+AGG | 0.324156 | 6.4:+2393268 | MS.gene47284:CDS |
GCTCTTCTCCGCCAAATGTT+TGG | 0.325475 | 6.4:+2391275 | MS.gene47284:CDS |
TTCTTCCCTTTAGTATCAAT+GGG | 0.348124 | 6.4:-2393256 | None:intergenic |
TGGAGTCATTTCAATATGAT+TGG | 0.356473 | 6.4:-2393167 | None:intergenic |
GAAGGGCTACAACTTCCTTC+TGG | 0.367171 | 6.4:+2394605 | MS.gene47284:CDS |
CTCTACACTGACAGCATTTG+TGG | 0.369345 | 6.4:+2396398 | MS.gene47284:intron |
GGCGGAGAAGAGCCATGATT+AGG | 0.386355 | 6.4:-2391265 | None:intergenic |
TTCTATGGTCCTTCAGGCTC+TGG | 0.398815 | 6.4:+2391233 | MS.gene47284:CDS |
GAGGAGGGCCATATTATCAT+TGG | 0.399231 | 6.4:+2394667 | MS.gene47284:CDS |
TCCTGAAAGCCTGCATCGCT+TGG | 0.402265 | 6.4:-2393187 | None:intergenic |
GCGGAGAAGAGCCATGATTA+GGG | 0.410779 | 6.4:-2391264 | None:intergenic |
TTTACCTTCAAAATGATCTC+TGG | 0.416432 | 6.4:-2395168 | None:intergenic |
TGAAGGAACAGAGCCCAAAA+AGG | 0.416911 | 6.4:+2394925 | MS.gene47284:CDS |
GTTGGTATTTCAGGTGAAGT+TGG | 0.432516 | 6.4:+2392523 | MS.gene47284:intron |
TCAAGAAATAATCAAAGAAA+TGG | 0.433507 | 6.4:+2393222 | MS.gene47284:CDS |
CGTTCTGCGGAGAGAATGTT+GGG | 0.440273 | 6.4:-2393497 | None:intergenic |
AAATGCACCAAGTGAAGAAC+AGG | 0.440498 | 6.4:+2393618 | MS.gene47284:CDS |
CAGTTCATTGGTAAGAAAGA+AGG | 0.442426 | 6.4:+2394587 | MS.gene47284:CDS |
TTTGTAGATGCTCATGAACT+TGG | 0.449160 | 6.4:-2396421 | None:intergenic |
CTCCGCCAAATGTTTGGACC+TGG | 0.453363 | 6.4:+2391281 | MS.gene47284:CDS |
TTCAGGTGAAGTTGGAGAAT+AGG | 0.455815 | 6.4:+2392531 | MS.gene47284:intron |
AGAGAGAAGAACGATGTTGT+GGG | 0.456869 | 6.4:+2391010 | None:intergenic |
AGAAATCAAATCGGAATTTG+AGG | 0.467465 | 6.4:+2394648 | MS.gene47284:CDS |
TATTCGTACATTAAGACAAC+GGG | 0.467729 | 6.4:-2393596 | None:intergenic |
AATAGACCCATTGATACTAA+AGG | 0.470695 | 6.4:+2393250 | MS.gene47284:CDS |
GGCTGCTTTATGCGCTATTG+AGG | 0.476133 | 6.4:+2395269 | MS.gene47284:CDS |
ATTGTTTGTTTGTCAGTGAA+AGG | 0.479733 | 6.4:-2394852 | None:intergenic |
ATAGACCCATTGATACTAAA+GGG | 0.485089 | 6.4:+2393251 | MS.gene47284:CDS |
GTTTGGACCTGGTGCTGAAA+AGG | 0.486709 | 6.4:+2391292 | MS.gene47284:CDS |
TTTAGGTTGTTTCAAGTTCG+TGG | 0.487361 | 6.4:+2395111 | MS.gene47284:intron |
ATATATTCTTCCCAGTCCAT+TGG | 0.489328 | 6.4:-2394879 | None:intergenic |
ATTGATACTAAAGGGAAGAA+AGG | 0.491720 | 6.4:+2393259 | MS.gene47284:CDS |
TGAAGCATGAAGTCTGCCAT+TGG | 0.492009 | 6.4:+2395308 | MS.gene47284:CDS |
TTACTAACCTGTTCTTCACT+TGG | 0.496208 | 6.4:-2393625 | None:intergenic |
TGTGAACTAGAACATTGTCT+AGG | 0.504995 | 6.4:-2391055 | None:intergenic |
AAACAATTCCTCCAATGGAC+TGG | 0.507805 | 6.4:+2394868 | MS.gene47284:CDS |
GCTCTGTTCCTTCATTATGT+CGG | 0.511967 | 6.4:-2394916 | None:intergenic |
TCATTGCAACATTTGGCTGA+AGG | 0.524105 | 6.4:+2396451 | MS.gene47284:CDS |
GTGAACTAGAACATTGTCTA+GGG | 0.525927 | 6.4:-2391054 | None:intergenic |
CCTCATTGAACCAGGAACAT+AGG | 0.527929 | 6.4:+2395556 | MS.gene47284:intron |
GAAGCATGAAGTCTGCCATT+GGG | 0.530639 | 6.4:+2395309 | MS.gene47284:CDS |
AGTTCATTGGTAAGAAAGAA+GGG | 0.531136 | 6.4:+2394588 | MS.gene47284:CDS |
CACCAGGTCCAAACATTTGG+CGG | 0.533440 | 6.4:-2391283 | None:intergenic |
TATTCTTCCCAGTCCATTGG+AGG | 0.537168 | 6.4:-2394876 | None:intergenic |
TGGCAAGAAAACCCTAATCA+TGG | 0.537203 | 6.4:+2391253 | MS.gene47284:CDS |
GAAATGACTCCAAGCGATGC+AGG | 0.544680 | 6.4:+2393178 | MS.gene47284:CDS |
AGTACTAGTGCTTAATGATG+TGG | 0.546260 | 6.4:+2393456 | MS.gene47284:intron |
CAAACAAACAATTCCTCCAA+TGG | 0.546977 | 6.4:+2394863 | MS.gene47284:CDS |
TAGGATGCGCCTTGGACAGA+AGG | 0.549273 | 6.4:+2395575 | MS.gene47284:CDS |
AATTGCATCCGACATAATGA+AGG | 0.550631 | 6.4:+2394908 | MS.gene47284:CDS |
TCGTTCTGCGGAGAGAATGT+TGG | 0.552349 | 6.4:-2393498 | None:intergenic |
CAGGAACATAGGATGCGCCT+TGG | 0.553627 | 6.4:+2395567 | MS.gene47284:intron |
ATTGGTTTCAGGCTGGGAGT+AGG | 0.555451 | 6.4:+2393110 | MS.gene47284:intron |
GAGAGAGAAGAACGATGTTG+TGG | 0.555979 | 6.4:+2391009 | None:intergenic |
GCCAAATGTTGCAATGAGGA+AGG | 0.563630 | 6.4:-2396445 | None:intergenic |
GGACCATAGAACAGCAAATG+AGG | 0.574079 | 6.4:-2391221 | None:intergenic |
GTACATTAAGACAACGGGAG+CGG | 0.575694 | 6.4:-2393591 | None:intergenic |
ATTAAGACAACGGGAGCGGA+TGG | 0.578928 | 6.4:-2393587 | None:intergenic |
TGTATTTCTCCATCGTTCTG+CGG | 0.579107 | 6.4:-2393510 | None:intergenic |
AACAATTCCTCCAATGGACT+GGG | 0.583344 | 6.4:+2394869 | MS.gene47284:CDS |
ACATTCTCTCCGCAGAACGA+TGG | 0.595529 | 6.4:+2393501 | MS.gene47284:CDS |
GTATAGCAGAGAAATCAAAT+CGG | 0.601405 | 6.4:+2394639 | MS.gene47284:CDS |
ACCTTCAAAATGATCTCTGG+AGG | 0.601868 | 6.4:-2395165 | None:intergenic |
ATCAAATCGGAATTTGAGGA+GGG | 0.625589 | 6.4:+2394652 | MS.gene47284:CDS |
AATCAAATCGGAATTTGAGG+AGG | 0.632114 | 6.4:+2394651 | MS.gene47284:CDS |
ATACGAGCAGCGAAACCAGA+AGG | 0.638037 | 6.4:-2394620 | None:intergenic |
TTATTCGTACATTAAGACAA+CGG | 0.642459 | 6.4:-2393597 | None:intergenic |
TGAAGTTGGAGAATAGGACA+TGG | 0.644504 | 6.4:+2392537 | MS.gene47284:CDS |
TTACATAATATGCAGCCCAA+TGG | 0.646334 | 6.4:-2395324 | None:intergenic |
TTCAGCCAAATGTTGCAATG+AGG | 0.665561 | 6.4:-2396449 | None:intergenic |
GTGGAGCTTACTGTTGGACA+CGG | 0.710106 | 6.4:-2394697 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAAAATTTAGAAGTA+TGG | - | chr6.4:2393861-2393880 | None:intergenic | 10.0% |
!! | TAAAGATTAATTCTTTAAAT+AGG | + | chr6.4:2396210-2396229 | MS.gene47284:intron | 10.0% |
!! | AGGTTTATAAAAAGTAAATA+AGG | + | chr6.4:2396081-2396100 | MS.gene47284:intron | 15.0% |
!! | ATAAGTTATTTATATAGCAA+AGG | - | chr6.4:2391876-2391895 | None:intergenic | 15.0% |
!! | GGTTTATAAAAAGTAAATAA+GGG | + | chr6.4:2396082-2396101 | MS.gene47284:intron | 15.0% |
!! | TAAATATTATACAGAAAGTT+CGG | - | chr6.4:2394410-2394429 | None:intergenic | 15.0% |
!!! | ATTTTTATTTATAAGTACTG+CGG | + | chr6.4:2393086-2393105 | MS.gene47284:intron | 15.0% |
!!! | TGATATGTTTTTAAGATATA+CGG | + | chr6.4:2392789-2392808 | MS.gene47284:intron | 15.0% |
!!! | TTTGTTTTTTTCAATTTGTT+AGG | + | chr6.4:2393880-2393899 | MS.gene47284:intron | 15.0% |
!! | AAATACTTTGATACTTATCA+GGG | + | chr6.4:2395866-2395885 | MS.gene47284:intron | 20.0% |
!! | AACTAACAAGCAAAATAATA+TGG | - | chr6.4:2393771-2393790 | None:intergenic | 20.0% |
!! | AAGTTCAAACTTATATTAGT+TGG | + | chr6.4:2392224-2392243 | MS.gene47284:intron | 20.0% |
!! | AATGTTTATAAAAGAGAACT+TGG | - | chr6.4:2394246-2394265 | None:intergenic | 20.0% |
!! | AATTGTAAATCAAATACAGT+AGG | - | chr6.4:2395420-2395439 | None:intergenic | 20.0% |
!! | ATACAAAGTAGTTATAGATT+GGG | + | chr6.4:2396318-2396337 | MS.gene47284:intron | 20.0% |
!! | ATATTTACAATTATTGAACC+AGG | - | chr6.4:2391553-2391572 | None:intergenic | 20.0% |
!! | CATAAAACTTATCAACTTTA+AGG | - | chr6.4:2395008-2395027 | None:intergenic | 20.0% |
!! | GAAACACTATTAAATTTGAA+CGG | + | chr6.4:2392639-2392658 | MS.gene47284:intron | 20.0% |
!! | GTTCATCTTTACTAAATATT+TGG | + | chr6.4:2394534-2394553 | MS.gene47284:intron | 20.0% |
!! | TATACAAAGTAGTTATAGAT+TGG | + | chr6.4:2396317-2396336 | MS.gene47284:intron | 20.0% |
!! | TCAAGAAATAATCAAAGAAA+TGG | + | chr6.4:2393222-2393241 | MS.gene47284:CDS | 20.0% |
!! | TTAATTCTTTAAATAGGTCT+TGG | + | chr6.4:2396216-2396235 | MS.gene47284:intron | 20.0% |
!! | TTCAAATTTAATAGTGTTTC+TGG | - | chr6.4:2392639-2392658 | None:intergenic | 20.0% |
!! | TTGTATAAGAAACACAATTA+AGG | - | chr6.4:2391141-2391160 | None:intergenic | 20.0% |
!!! | AAAAATAAAAAGTACACACT+TGG | + | chr6.4:2391376-2391395 | MS.gene47284:intron | 20.0% |
!!! | AAAATAAAAAGTACACACTT+GGG | + | chr6.4:2391377-2391396 | MS.gene47284:intron | 20.0% |
!!! | AAACTCTATAATCTCTTTTT+TGG | - | chr6.4:2396298-2396317 | None:intergenic | 20.0% |
!!! | AACTTATATTAGTTGGTTTT+TGG | + | chr6.4:2392231-2392250 | MS.gene47284:intron | 20.0% |
!!! | AAGTTTTTTTTTATCCAAAC+AGG | + | chr6.4:2391942-2391961 | MS.gene47284:intron | 20.0% |
!!! | ACATTCTTGTAATTTTTGTT+AGG | + | chr6.4:2391160-2391179 | MS.gene47284:intron | 20.0% |
!!! | AGAAAATTTCTAGATATAGA+AGG | + | chr6.4:2392134-2392153 | MS.gene47284:intron | 20.0% |
!!! | AGATTATTTTAGTAATGCTA+AGG | - | chr6.4:2392328-2392347 | None:intergenic | 20.0% |
!!! | AGTTTTTTTTTATCCAAACA+GGG | + | chr6.4:2391943-2391962 | MS.gene47284:intron | 20.0% |
!!! | CAATGTGCAATTTATATTTT+TGG | + | chr6.4:2392277-2392296 | MS.gene47284:intron | 20.0% |
!!! | CATTCTTGTAATTTTTGTTA+GGG | + | chr6.4:2391161-2391180 | MS.gene47284:intron | 20.0% |
!!! | CTTTTCAAAGATTTGTTTTA+TGG | + | chr6.4:2394773-2394792 | MS.gene47284:intron | 20.0% |
!!! | GGGTTCAATTTTATTTTTTT+GGG | + | chr6.4:2391397-2391416 | MS.gene47284:intron | 20.0% |
!!! | TGATAAGTATCAAAGTATTT+GGG | - | chr6.4:2395866-2395885 | None:intergenic | 20.0% |
!!! | TGGGTTCAATTTTATTTTTT+TGG | + | chr6.4:2391396-2391415 | MS.gene47284:intron | 20.0% |
!!! | TTGGTTTTTTTTTAAGCATT+GGG | + | chr6.4:2393697-2393716 | MS.gene47284:intron | 20.0% |
!!! | TTTGGTTTTTTTTTAAGCAT+TGG | + | chr6.4:2393696-2393715 | MS.gene47284:intron | 20.0% |
!!! | TTTTTTTTTATTGCAGGTTT+CGG | + | chr6.4:2391187-2391206 | MS.gene47284:intron | 20.0% |
! | AAAAACTGAGGTAAACTAAA+GGG | - | chr6.4:2393407-2393426 | None:intergenic | 25.0% |
! | AAATGAAGAATACATGGTAA+TGG | - | chr6.4:2395502-2395521 | None:intergenic | 25.0% |
! | AACTAAAGGGATAAAAACAA+AGG | - | chr6.4:2393394-2393413 | None:intergenic | 25.0% |
! | AATGACAACACAAAAGTAAA+GGG | - | chr6.4:2392600-2392619 | None:intergenic | 25.0% |
! | ACTATTAAATTTGAACGGTT+TGG | + | chr6.4:2392644-2392663 | MS.gene47284:intron | 25.0% |
! | ATAGATATATCCAAGAATCA+AGG | - | chr6.4:2392914-2392933 | None:intergenic | 25.0% |
! | ATGACAAATGTTAGTAACTT+AGG | + | chr6.4:2393349-2393368 | MS.gene47284:intron | 25.0% |
! | CAAATACTTTGATACTTATC+AGG | + | chr6.4:2395865-2395884 | MS.gene47284:intron | 25.0% |
! | CATATTAAATGATAAGCTTG+TGG | - | chr6.4:2394719-2394738 | None:intergenic | 25.0% |
! | CTAAATCAGTTAATATCAAC+AGG | + | chr6.4:2396061-2396080 | MS.gene47284:intron | 25.0% |
! | CTATTAAATTTGAACGGTTT+GGG | + | chr6.4:2392645-2392664 | MS.gene47284:intron | 25.0% |
! | TAAATATTTGGAGATCTATG+TGG | + | chr6.4:2394546-2394565 | MS.gene47284:intron | 25.0% |
! | TACTCCTCACTAATTATTAA+GGG | - | chr6.4:2392693-2392712 | None:intergenic | 25.0% |
! | TAGTTATAGATTGGGATATA+AGG | + | chr6.4:2396326-2396345 | MS.gene47284:intron | 25.0% |
! | TGAACATTCAACTCATAAAA+TGG | - | chr6.4:2394519-2394538 | None:intergenic | 25.0% |
! | TGATATTTCATTTCAGAATC+TGG | + | chr6.4:2395361-2395380 | MS.gene47284:intron | 25.0% |
! | TGTCATAATATGTCTTAACA+TGG | - | chr6.4:2393913-2393932 | None:intergenic | 25.0% |
! | TTAAAAACTAGCTATCAAAG+AGG | - | chr6.4:2395834-2395853 | None:intergenic | 25.0% |
! | TTATTCGTACATTAAGACAA+CGG | - | chr6.4:2393600-2393619 | None:intergenic | 25.0% |
!! | CTGATAAGTATCAAAGTATT+TGG | - | chr6.4:2395867-2395886 | None:intergenic | 25.0% |
!! | CTTTTATAAACATTGTGGTT+AGG | + | chr6.4:2394252-2394271 | MS.gene47284:intron | 25.0% |
!! | GTTCTCTTTTATAAACATTG+TGG | + | chr6.4:2394247-2394266 | MS.gene47284:intron | 25.0% |
!! | TAGTTTGAGATGTATTTCAT+TGG | + | chr6.4:2393010-2393029 | MS.gene47284:intron | 25.0% |
!! | TTATACTGTTGTTTACTTCT+TGG | + | chr6.4:2392463-2392482 | MS.gene47284:intron | 25.0% |
!!! | ATAAGTTTTGTGAGACTATT+TGG | + | chr6.4:2391722-2391741 | MS.gene47284:intron | 25.0% |
!!! | CAATTTTTTGAGATTTTGAG+CGG | - | chr6.4:2391087-2391106 | None:intergenic | 25.0% |
!!! | GAAGGAATGTAATTGATTTT+TGG | + | chr6.4:2392152-2392171 | MS.gene47284:intron | 25.0% |
!!! | GATAGTGATTTGTTCATATT+TGG | + | chr6.4:2394094-2394113 | MS.gene47284:intron | 25.0% |
!!! | GGGTTTTTTTTTTTTATTGC+AGG | + | chr6.4:2391181-2391200 | MS.gene47284:intron | 25.0% |
!!! | TCTTTGATAGCTAGTTTTTA+AGG | + | chr6.4:2395833-2395852 | MS.gene47284:intron | 25.0% |
!!! | TGATTTTTGGTTTATACCAT+GGG | + | chr6.4:2392165-2392184 | MS.gene47284:intron | 25.0% |
!!! | TTAGTTATCAAGGAAGTATT+TGG | - | chr6.4:2394278-2394297 | None:intergenic | 25.0% |
!!! | TTGATTTTTGGTTTATACCA+TGG | + | chr6.4:2392164-2392183 | MS.gene47284:intron | 25.0% |
!!! | TTTATTTTGTATAAACCCGT+GGG | + | chr6.4:2395693-2395712 | MS.gene47284:intron | 25.0% |
!!! | TTTTGCTTGTTAGTTATTTC+CGG | + | chr6.4:2393776-2393795 | MS.gene47284:intron | 25.0% |
!!! | TTTTTTTTTAAGCATTGGGA+CGG | + | chr6.4:2393701-2393720 | MS.gene47284:intron | 25.0% |
AAAACATATCAGTGATTCTC+TGG | - | chr6.4:2392780-2392799 | None:intergenic | 30.0% | |
AAAGGGAAGAAAGGATTTAA+AGG | + | chr6.4:2393268-2393287 | MS.gene47284:CDS | 30.0% | |
AAATAGGCTCTTTGTTAACT+AGG | + | chr6.4:2391575-2391594 | MS.gene47284:intron | 30.0% | |
AACAAAATCTCACTTCTCAA+AGG | - | chr6.4:2395958-2395977 | None:intergenic | 30.0% | |
AACATTTGTCATACAAACCA+AGG | - | chr6.4:2393341-2393360 | None:intergenic | 30.0% | |
AACTAACAAAAGGCTGAATA+TGG | + | chr6.4:2394292-2394311 | MS.gene47284:intron | 30.0% | |
AAGGGATAAAAACAAAGGTA+AGG | - | chr6.4:2393389-2393408 | None:intergenic | 30.0% | |
AATAGACCCATTGATACTAA+AGG | + | chr6.4:2393250-2393269 | MS.gene47284:CDS | 30.0% | |
AATAGGCTCTTTGTTAACTA+GGG | + | chr6.4:2391576-2391595 | MS.gene47284:intron | 30.0% | |
AGAAATCAAATCGGAATTTG+AGG | + | chr6.4:2394648-2394667 | MS.gene47284:CDS | 30.0% | |
AGGGTTTCTATATTACTTTC+TGG | + | chr6.4:2394181-2394200 | MS.gene47284:intron | 30.0% | |
AGTTCATTGGTAAGAAAGAA+GGG | + | chr6.4:2394588-2394607 | MS.gene47284:CDS | 30.0% | |
ATAGAACATCATTCATCTAC+CGG | - | chr6.4:2393798-2393817 | None:intergenic | 30.0% | |
ATAGACCCATTGATACTAAA+GGG | + | chr6.4:2393251-2393270 | MS.gene47284:CDS | 30.0% | |
ATGAATGATGTTCTATCATG+TGG | + | chr6.4:2393802-2393821 | MS.gene47284:intron | 30.0% | |
ATGACAACACAAAAGTAAAG+GGG | - | chr6.4:2392599-2392618 | None:intergenic | 30.0% | |
ATTGATACTAAAGGGAAGAA+AGG | + | chr6.4:2393259-2393278 | MS.gene47284:CDS | 30.0% | |
ATTGGGATATAAGGTAGTAT+AGG | + | chr6.4:2396335-2396354 | MS.gene47284:intron | 30.0% | |
ATTGTTTGTTTGTCAGTGAA+AGG | - | chr6.4:2394855-2394874 | None:intergenic | 30.0% | |
CAGTGTAGAGAAGAAAAAAA+TGG | - | chr6.4:2396388-2396407 | None:intergenic | 30.0% | |
CGCTCAAAATCTCAAAAAAT+TGG | + | chr6.4:2391085-2391104 | MS.gene47284:CDS | 30.0% | |
CTATCTAAGTCACAACATTA+AGG | - | chr6.4:2391999-2392018 | None:intergenic | 30.0% | |
CTGTTATAAACACTGTGATT+CGG | + | chr6.4:2394220-2394239 | MS.gene47284:intron | 30.0% | |
GAAAAACTGAGGTAAACTAA+AGG | - | chr6.4:2393408-2393427 | None:intergenic | 30.0% | |
GAATGACAACACAAAAGTAA+AGG | - | chr6.4:2392601-2392620 | None:intergenic | 30.0% | |
GATTATACATATTGTGCTCA+TGG | + | chr6.4:2392435-2392454 | MS.gene47284:intron | 30.0% | |
GGGTTTCTATATTACTTTCT+GGG | + | chr6.4:2394182-2394201 | MS.gene47284:intron | 30.0% | |
GGTGTTCAATTTATCAGTAT+TGG | + | chr6.4:2391496-2391515 | MS.gene47284:intron | 30.0% | |
GTACTCCTCACTAATTATTA+AGG | - | chr6.4:2392694-2392713 | None:intergenic | 30.0% | |
GTATAGCAGAGAAATCAAAT+CGG | + | chr6.4:2394639-2394658 | MS.gene47284:CDS | 30.0% | |
GTTGCATTATTTAAGTCGTT+TGG | + | chr6.4:2395803-2395822 | MS.gene47284:intron | 30.0% | |
TAAGACATATTATGACATGC+TGG | + | chr6.4:2393916-2393935 | MS.gene47284:intron | 30.0% | |
TAATGTTGTGACTTAGATAG+TGG | + | chr6.4:2391999-2392018 | MS.gene47284:intron | 30.0% | |
TATTCGTACATTAAGACAAC+GGG | - | chr6.4:2393599-2393618 | None:intergenic | 30.0% | |
TGAGATGTATTTCATTGGAT+TGG | + | chr6.4:2393015-2393034 | MS.gene47284:intron | 30.0% | |
TGAGTGGAAAAAAAATGTGT+CGG | + | chr6.4:2392045-2392064 | MS.gene47284:intron | 30.0% | |
TGGAGTCATTTCAATATGAT+TGG | - | chr6.4:2393170-2393189 | None:intergenic | 30.0% | |
TTCTTCCCTTTAGTATCAAT+GGG | - | chr6.4:2393259-2393278 | None:intergenic | 30.0% | |
TTTACAATTATTGAACCAGG+AGG | - | chr6.4:2391550-2391569 | None:intergenic | 30.0% | |
TTTACCTTCAAAATGATCTC+TGG | - | chr6.4:2395171-2395190 | None:intergenic | 30.0% | |
TTTCTTCCCTTTAGTATCAA+TGG | - | chr6.4:2393260-2393279 | None:intergenic | 30.0% | |
! | AACATTAGCTTGAAAAACTG+AGG | - | chr6.4:2393419-2393438 | None:intergenic | 30.0% |
! | AACTGATTTAGTGTGTGTTT+GGG | - | chr6.4:2396052-2396071 | None:intergenic | 30.0% |
! | ATGTGATTTCTAGATAGTTG+AGG | + | chr6.4:2392102-2392121 | MS.gene47284:intron | 30.0% |
! | ATTTATAAGTACTGCGGAAT+TGG | + | chr6.4:2393092-2393111 | MS.gene47284:intron | 30.0% |
! | CAGCTTTATGTTATTATCCT+TGG | + | chr6.4:2392970-2392989 | MS.gene47284:intron | 30.0% |
! | CTTCCTTGATAACTAACAAA+AGG | + | chr6.4:2394282-2394301 | MS.gene47284:intron | 30.0% |
! | GAAAGGAATTATGTTCGTTT+TGG | + | chr6.4:2393678-2393697 | MS.gene47284:intron | 30.0% |
! | GCTTTTGTAGATTTAGTGAA+GGG | + | chr6.4:2394162-2394181 | MS.gene47284:intron | 30.0% |
! | GTTGAAGTTTTACAGTTCAT+TGG | + | chr6.4:2394575-2394594 | MS.gene47284:CDS | 30.0% |
! | TAACTGATTTAGTGTGTGTT+TGG | - | chr6.4:2396053-2396072 | None:intergenic | 30.0% |
! | TGCTTTTGTAGATTTAGTGA+AGG | + | chr6.4:2394161-2394180 | MS.gene47284:intron | 30.0% |
! | TTCATTGGATTGGATTTGTT+GGG | + | chr6.4:2393025-2393044 | MS.gene47284:intron | 30.0% |
! | TTGAGAAGTGAGATTTTGTT+GGG | + | chr6.4:2395958-2395977 | MS.gene47284:intron | 30.0% |
! | TTTCATTGGATTGGATTTGT+TGG | + | chr6.4:2393024-2393043 | MS.gene47284:intron | 30.0% |
! | TTTGAGAAGTGAGATTTTGT+TGG | + | chr6.4:2395957-2395976 | MS.gene47284:intron | 30.0% |
! | TTTTTGCTCCACTTACTATA+AGG | + | chr6.4:2394358-2394377 | MS.gene47284:intron | 30.0% |
!! | TATGTTTCGTGAGTTTTGAT+TGG | + | chr6.4:2392408-2392427 | MS.gene47284:intron | 30.0% |
!! | TCTAAAACAACGTTTTCAAG+TGG | - | chr6.4:2394133-2394152 | None:intergenic | 30.0% |
!! | TTGTAACATGTGTTACTTGA+AGG | + | chr6.4:2394826-2394845 | MS.gene47284:intron | 30.0% |
!!! | CATTGTTTTTGTTTGTTCAG+AGG | + | chr6.4:2395248-2395267 | MS.gene47284:intron | 30.0% |
!!! | CTAAAACAACGTTTTCAAGT+GGG | - | chr6.4:2394132-2394151 | None:intergenic | 30.0% |
!!! | GATAGCTAGTTTTTAAGGAA+GGG | + | chr6.4:2395838-2395857 | MS.gene47284:intron | 30.0% |
!!! | GGTTTTTGTTATTATGACAG+AGG | + | chr6.4:2392810-2392829 | MS.gene47284:intron | 30.0% |
!!! | GTTTATTTTGTATAAACCCG+TGG | + | chr6.4:2395692-2395711 | MS.gene47284:intron | 30.0% |
!!! | TGATAGCTAGTTTTTAAGGA+AGG | + | chr6.4:2395837-2395856 | MS.gene47284:intron | 30.0% |
AACAAAAGGCTGAATATGGA+TGG | + | chr6.4:2394296-2394315 | MS.gene47284:intron | 35.0% | |
AACATGTGAATTAGGATGCA+AGG | - | chr6.4:2395923-2395942 | None:intergenic | 35.0% | |
AACGAGCAAATCATACTACT+CGG | - | chr6.4:2395786-2395805 | None:intergenic | 35.0% | |
AATCAAATCGGAATTTGAGG+AGG | + | chr6.4:2394651-2394670 | MS.gene47284:CDS | 35.0% | |
AATTGCATCCGACATAATGA+AGG | + | chr6.4:2394908-2394927 | MS.gene47284:CDS | 35.0% | |
ACAAAAGGCTGAATATGGAT+GGG | + | chr6.4:2394297-2394316 | MS.gene47284:intron | 35.0% | |
ACAACCTAAAGCATATGACA+AGG | - | chr6.4:2395101-2395120 | None:intergenic | 35.0% | |
ACACACAACTGTAATGTCTT+GGG | + | chr6.4:2391457-2391476 | MS.gene47284:intron | 35.0% | |
AGTACCTTCGATGTGAAAAA+TGG | - | chr6.4:2395601-2395620 | None:intergenic | 35.0% | |
AGTACTAGTGCTTAATGATG+TGG | + | chr6.4:2393456-2393475 | MS.gene47284:intron | 35.0% | |
ATACCATGTCATGATGTCAA+TGG | + | chr6.4:2394452-2394471 | MS.gene47284:intron | 35.0% | |
ATATATTCTTCCCAGTCCAT+TGG | - | chr6.4:2394882-2394901 | None:intergenic | 35.0% | |
ATATCGTTTGAACTCCATGA+AGG | + | chr6.4:2392932-2392951 | MS.gene47284:intron | 35.0% | |
ATCAAATCGGAATTTGAGGA+GGG | + | chr6.4:2394652-2394671 | MS.gene47284:CDS | 35.0% | |
ATCAATGTTGTCAAATAGCG+AGG | - | chr6.4:2394053-2394072 | None:intergenic | 35.0% | |
ATGTTCTATCATGTGGTTGT+TGG | + | chr6.4:2393809-2393828 | MS.gene47284:intron | 35.0% | |
ATTTGTCATACAAACCAAGG+CGG | - | chr6.4:2393338-2393357 | None:intergenic | 35.0% | |
CAAACAAACAATTCCTCCAA+TGG | + | chr6.4:2394863-2394882 | MS.gene47284:CDS | 35.0% | |
CAACCTAAAGCATATGACAA+GGG | - | chr6.4:2395100-2395119 | None:intergenic | 35.0% | |
CAGTTCATTGGTAAGAAAGA+AGG | + | chr6.4:2394587-2394606 | MS.gene47284:CDS | 35.0% | |
CATCATGACATGGTATTCTA+TGG | - | chr6.4:2394448-2394467 | None:intergenic | 35.0% | |
CCAACAAAGACGATTAGAAA+AGG | - | chr6.4:2392504-2392523 | None:intergenic | 35.0% | |
CCAAGGAAATGAAGAATACA+TGG | - | chr6.4:2395508-2395527 | None:intergenic | 35.0% | |
CCATGTATTCTTCATTTCCT+TGG | + | chr6.4:2395505-2395524 | MS.gene47284:intron | 35.0% | |
CGCTATTTGACAACATTGAT+GGG | + | chr6.4:2394053-2394072 | MS.gene47284:intron | 35.0% | |
GACAGTGACATTGAAATGAA+AGG | + | chr6.4:2393661-2393680 | MS.gene47284:intron | 35.0% | |
GAGTGGAAAAAAAATGTGTC+GGG | + | chr6.4:2392046-2392065 | MS.gene47284:intron | 35.0% | |
GCAAGTCTCCAATGATAATA+TGG | - | chr6.4:2394678-2394697 | None:intergenic | 35.0% | |
GCATTAGCACTATAACATAG+AGG | - | chr6.4:2394025-2394044 | None:intergenic | 35.0% | |
GGTACCCTTAATAATTAGTG+AGG | + | chr6.4:2392686-2392705 | MS.gene47284:intron | 35.0% | |
GTGAACTAGAACATTGTCTA+GGG | - | chr6.4:2391057-2391076 | None:intergenic | 35.0% | |
TAATGTCTTGGGTTTGAACT+CGG | + | chr6.4:2391468-2391487 | MS.gene47284:intron | 35.0% | |
TACTATAAGGATGATGCCAA+AGG | + | chr6.4:2394371-2394390 | MS.gene47284:intron | 35.0% | |
TATAGCAATGACCTATAGTG+TGG | + | chr6.4:2396106-2396125 | MS.gene47284:intron | 35.0% | |
TCAAATAAGCCAATCCAAAC+TGG | - | chr6.4:2391688-2391707 | None:intergenic | 35.0% | |
TCCTATTATTGCACACATTC+AGG | - | chr6.4:2395634-2395653 | None:intergenic | 35.0% | |
TCCTGAATGTGTGCAATAAT+AGG | + | chr6.4:2395630-2395649 | MS.gene47284:intron | 35.0% | |
TCGCTATTTGACAACATTGA+TGG | + | chr6.4:2394052-2394071 | MS.gene47284:intron | 35.0% | |
TGAATATGGATGGGATAGTT+AGG | + | chr6.4:2394306-2394325 | MS.gene47284:intron | 35.0% | |
TGGTATTGCAAGATGATAGT+TGG | + | chr6.4:2393829-2393848 | MS.gene47284:intron | 35.0% | |
TGTGAACTAGAACATTGTCT+AGG | - | chr6.4:2391058-2391077 | None:intergenic | 35.0% | |
TTAAACTGTCATCGCGATAA+CGG | + | chr6.4:2391601-2391620 | MS.gene47284:intron | 35.0% | |
TTACATAATATGCAGCCCAA+TGG | - | chr6.4:2395327-2395346 | None:intergenic | 35.0% | |
TTACTAACCTGTTCTTCACT+TGG | - | chr6.4:2393628-2393647 | None:intergenic | 35.0% | |
TTCTAATCGTCTTTGTTGGT+TGG | + | chr6.4:2392505-2392524 | MS.gene47284:intron | 35.0% | |
TTGCAAGATGATAGTTGGTT+AGG | + | chr6.4:2393834-2393853 | MS.gene47284:intron | 35.0% | |
TTGTTCTGTACCTTGATTCT+TGG | + | chr6.4:2392901-2392920 | MS.gene47284:intron | 35.0% | |
TTTGTAGATGCTCATGAACT+TGG | - | chr6.4:2396424-2396443 | None:intergenic | 35.0% | |
! | ACATTGATTGAGTTGTCTCA+AGG | - | chr6.4:2392263-2392282 | None:intergenic | 35.0% |
! | ACTGATTTAGTGTGTGTTTG+GGG | - | chr6.4:2396051-2396070 | None:intergenic | 35.0% |
! | CAGCCTTTTGTTAGTTATCA+AGG | - | chr6.4:2394288-2394307 | None:intergenic | 35.0% |
! | CCTTTTCTAATCGTCTTTGT+TGG | + | chr6.4:2392501-2392520 | MS.gene47284:intron | 35.0% |
! | TCTTTGTTGGTTGGTATTTC+AGG | + | chr6.4:2392514-2392533 | MS.gene47284:intron | 35.0% |
!! | AAGAATACATGGTAATGGTG+GGG | - | chr6.4:2395497-2395516 | None:intergenic | 35.0% |
!! | AGAACATTGTCTAGGGTTTT+GGG | - | chr6.4:2391050-2391069 | None:intergenic | 35.0% |
!! | GAAGAATACATGGTAATGGT+GGG | - | chr6.4:2395498-2395517 | None:intergenic | 35.0% |
!! | TAGAACATTGTCTAGGGTTT+TGG | - | chr6.4:2391051-2391070 | None:intergenic | 35.0% |
!! | TGAAGAATACATGGTAATGG+TGG | - | chr6.4:2395499-2395518 | None:intergenic | 35.0% |
!! | TTAGCTTTTCTAGACAGTGA+AGG | + | chr6.4:2392075-2392094 | MS.gene47284:intron | 35.0% |
!! | TTTAGGTTGTTTCAAGTTCG+TGG | + | chr6.4:2395111-2395130 | MS.gene47284:intron | 35.0% |
!!! | AGGAAGTTTCGGTTTTAGAT+CGG | + | chr6.4:2393954-2393973 | MS.gene47284:intron | 35.0% |
AAACAATTCCTCCAATGGAC+TGG | + | chr6.4:2394868-2394887 | MS.gene47284:CDS | 40.0% | |
AAATGCACCAAGTGAAGAAC+AGG | + | chr6.4:2393618-2393637 | MS.gene47284:CDS | 40.0% | |
AAGGCAAAGTGCAACTATCA+GGG | - | chr6.4:2392309-2392328 | None:intergenic | 40.0% | |
AATGCAGCTGATGTGATCTT+AGG | + | chr6.4:2391661-2391680 | MS.gene47284:intron | 40.0% | |
AATGTCTTGGGTTTGAACTC+GGG | + | chr6.4:2391469-2391488 | MS.gene47284:intron | 40.0% | |
ACCTTCAAAATGATCTCTGG+AGG | - | chr6.4:2395168-2395187 | None:intergenic | 40.0% | |
AGCTTCGGAACATGTGAATT+AGG | - | chr6.4:2395931-2395950 | None:intergenic | 40.0% | |
AGTCCATTGACATCATGACA+TGG | - | chr6.4:2394458-2394477 | None:intergenic | 40.0% | |
AGTGTTTATAACAGAGACCG+CGG | - | chr6.4:2394214-2394233 | None:intergenic | 40.0% | |
ATCAGCTACTTCATACTCCA+AGG | - | chr6.4:2395525-2395544 | None:intergenic | 40.0% | |
ATCTTAGGACCAGTTTGGAT+TGG | + | chr6.4:2391676-2391695 | MS.gene47284:intron | 40.0% | |
ATGTCTTCTGCATGAACTCA+GGG | + | chr6.4:2395394-2395413 | MS.gene47284:intron | 40.0% | |
ATGTGATCTTAGGACCAGTT+TGG | + | chr6.4:2391671-2391690 | MS.gene47284:intron | 40.0% | |
CACACACAACTGTAATGTCT+TGG | + | chr6.4:2391456-2391475 | MS.gene47284:intron | 40.0% | |
CATGACATGGTATTCTATGG+TGG | - | chr6.4:2394445-2394464 | None:intergenic | 40.0% | |
CTATGTTCCTGGTTCAATGA+GGG | - | chr6.4:2395558-2395577 | None:intergenic | 40.0% | |
GAAACTCGGAAAGGAAGTTT+CGG | + | chr6.4:2393943-2393962 | MS.gene47284:intron | 40.0% | |
GAACAAATCACTATCGTCTG+TGG | - | chr6.4:2394089-2394108 | None:intergenic | 40.0% | |
GATAGGGACTTGGGTATTAT+GGG | + | chr6.4:2395741-2395760 | MS.gene47284:intron | 40.0% | |
GCTCTGTTCCTTCATTATGT+CGG | - | chr6.4:2394919-2394938 | None:intergenic | 40.0% | |
GGCATAGTGAACTGAATCTT+TGG | + | chr6.4:2393046-2393065 | MS.gene47284:intron | 40.0% | |
GGCATCATCCTTATAGTAAG+TGG | - | chr6.4:2394369-2394388 | None:intergenic | 40.0% | |
GTACCTCGACAGAAAAGAAA+AGG | + | chr6.4:2392752-2392771 | MS.gene47284:intron | 40.0% | |
TAAGGCAAAGTGCAACTATC+AGG | - | chr6.4:2392310-2392329 | None:intergenic | 40.0% | |
TATCTCCACGACTGTAACTA+AGG | - | chr6.4:2391969-2391988 | None:intergenic | 40.0% | |
TATGTTCCTGGTTCAATGAG+GGG | - | chr6.4:2395557-2395576 | None:intergenic | 40.0% | |
TCCTTCCTCATTGCAACATT+TGG | + | chr6.4:2396444-2396463 | MS.gene47284:CDS | 40.0% | |
TCTCCCTTGTCATATGCTTT+AGG | + | chr6.4:2395094-2395113 | MS.gene47284:intron | 40.0% | |
TGAAGTTGGAGAATAGGACA+TGG | + | chr6.4:2392537-2392556 | MS.gene47284:CDS | 40.0% | |
TGATAGGGACTTGGGTATTA+TGG | + | chr6.4:2395740-2395759 | MS.gene47284:intron | 40.0% | |
TGGAGCAAAAAAAGTAGAGC+AGG | - | chr6.4:2394349-2394368 | None:intergenic | 40.0% | |
TGGCAAGAAAACCCTAATCA+TGG | + | chr6.4:2391253-2391272 | MS.gene47284:CDS | 40.0% | |
TGTATTTCTCCATCGTTCTG+CGG | - | chr6.4:2393513-2393532 | None:intergenic | 40.0% | |
TTCAGGTGAAGTTGGAGAAT+AGG | + | chr6.4:2392531-2392550 | MS.gene47284:intron | 40.0% | |
! | AAAACAACCTTTTCAGCACC+AGG | - | chr6.4:2391302-2391321 | None:intergenic | 40.0% |
! | AACAATTCCTCCAATGGACT+GGG | + | chr6.4:2394869-2394888 | MS.gene47284:CDS | 40.0% |
! | AGTGATTGTCACTTCGTCTA+TGG | - | chr6.4:2391424-2391443 | None:intergenic | 40.0% |
! | ATGCCAAGTGCAAACCTTTT+TGG | - | chr6.4:2394942-2394961 | None:intergenic | 40.0% |
! | CAACATTGATGGGCATATCA+CGG | + | chr6.4:2394063-2394082 | MS.gene47284:intron | 40.0% |
! | GAACCTTTTCTTTTCTGTCG+AGG | - | chr6.4:2392758-2392777 | None:intergenic | 40.0% |
! | GAAGTGAGATTTTGTTGGGA+TGG | + | chr6.4:2395962-2395981 | MS.gene47284:intron | 40.0% |
! | GACATGCTGGTTAAGAAACT+CGG | + | chr6.4:2393929-2393948 | MS.gene47284:intron | 40.0% |
! | GTTGGTATTTCAGGTGAAGT+TGG | + | chr6.4:2392523-2392542 | MS.gene47284:intron | 40.0% |
! | TCCTCCAGAGATCATTTTGA+AGG | + | chr6.4:2395164-2395183 | MS.gene47284:CDS | 40.0% |
! | TGCCAAGTGCAAACCTTTTT+GGG | - | chr6.4:2394941-2394960 | None:intergenic | 40.0% |
!! | AGAATACATGGTAATGGTGG+GGG | - | chr6.4:2395496-2395515 | None:intergenic | 40.0% |
!! | ATGATGCCAAAGGCATTCAT+AGG | + | chr6.4:2394381-2394400 | MS.gene47284:intron | 40.0% |
!! | CAAATCATACTACTCGGTGT+GGG | - | chr6.4:2395780-2395799 | None:intergenic | 40.0% |
!! | TGTCCTCATTTGCTGTTCTA+TGG | + | chr6.4:2391218-2391237 | MS.gene47284:CDS | 40.0% |
!!! | AAGGCCATTTTTCACATCGA+AGG | + | chr6.4:2395594-2395613 | MS.gene47284:CDS | 40.0% |
!!! | ATTGGGACGGTTGTTTTTTC+TGG | + | chr6.4:2393714-2393733 | MS.gene47284:intron | 40.0% |
!!! | TTTTTTCCCCTCATTGAACC+AGG | + | chr6.4:2395548-2395567 | MS.gene47284:intron | 40.0% |
AAATAGGTCTTGGTACCTCG+AGG | + | chr6.4:2396226-2396245 | MS.gene47284:intron | 45.0% | |
AAGCTTGTGGAGCTTACTGT+TGG | - | chr6.4:2394706-2394725 | None:intergenic | 45.0% | |
AATAGGTCTTGGTACCTCGA+GGG | + | chr6.4:2396227-2396246 | MS.gene47284:intron | 45.0% | |
ACAACGATTGAGTTCTCCCA+TGG | - | chr6.4:2392184-2392203 | None:intergenic | 45.0% | |
ACAAGAGTCGACAACACGAT+CGG | - | chr6.4:2395041-2395060 | None:intergenic | 45.0% | |
ACGAATGTTGTGCTCCTTCA+TGG | - | chr6.4:2392949-2392968 | None:intergenic | 45.0% | |
ACTGTAACTAAGGCCCTGTT+TGG | - | chr6.4:2391959-2391978 | None:intergenic | 45.0% | |
AGCCCAAAAAGGTTTGCACT+TGG | + | chr6.4:2394936-2394955 | MS.gene47284:intron | 45.0% | |
ATATCTTAGTGCTTCCGCCT+TGG | + | chr6.4:2393321-2393340 | MS.gene47284:intron | 45.0% | |
ATGGGGATTGATAGGGACTT+GGG | + | chr6.4:2395732-2395751 | MS.gene47284:intron | 45.0% | |
ATTGAACCAGGAGGTCCATA+AGG | - | chr6.4:2391541-2391560 | None:intergenic | 45.0% | |
CAAGGGAGATGAAAGATGCA+TGG | - | chr6.4:2395083-2395102 | None:intergenic | 45.0% | |
CAATGACCTATAGTGTGGCA+CGG | + | chr6.4:2396111-2396130 | MS.gene47284:intron | 45.0% | |
CACGAGTTTCAAATCGATCC+TGG | - | chr6.4:2396170-2396189 | None:intergenic | 45.0% | |
CAGTTGTGTGTGTGAGTTTC+AGG | - | chr6.4:2391448-2391467 | None:intergenic | 45.0% | |
CCTATGTTCCTGGTTCAATG+AGG | - | chr6.4:2395559-2395578 | None:intergenic | 45.0% | |
CCTCATTGAACCAGGAACAT+AGG | + | chr6.4:2395556-2395575 | MS.gene47284:intron | 45.0% | |
CGGAATCCTATGAATGCCTT+TGG | - | chr6.4:2394390-2394409 | None:intergenic | 45.0% | |
CTCTACACTGACAGCATTTG+TGG | + | chr6.4:2396398-2396417 | MS.gene47284:intron | 45.0% | |
CTTCTCAAAGGATGCAGCTT+CGG | - | chr6.4:2395946-2395965 | None:intergenic | 45.0% | |
GAAAAATGGCCTTCTGTCCA+AGG | - | chr6.4:2395587-2395606 | None:intergenic | 45.0% | |
GAATTCTTCTACTCGCCATG+GGG | + | chr6.4:2395715-2395734 | MS.gene47284:intron | 45.0% | |
GAGGAGGGCCATATTATCAT+TGG | + | chr6.4:2394667-2394686 | MS.gene47284:CDS | 45.0% | |
GAGTAGGTTCCTTAAACACG+TGG | + | chr6.4:2396143-2396162 | MS.gene47284:intron | 45.0% | |
GATGTCTTCTGCATGAACTC+AGG | + | chr6.4:2395393-2395412 | MS.gene47284:intron | 45.0% | |
GCCAAATGTTGCAATGAGGA+AGG | - | chr6.4:2396448-2396467 | None:intergenic | 45.0% | |
GCTGGTTAAGAAACTCGGAA+AGG | + | chr6.4:2393934-2393953 | MS.gene47284:intron | 45.0% | |
GGAATTCTTCTACTCGCCAT+GGG | + | chr6.4:2395714-2395733 | MS.gene47284:intron | 45.0% | |
GGACCATAGAACAGCAAATG+AGG | - | chr6.4:2391224-2391243 | None:intergenic | 45.0% | |
GGGAGTTTCTATGATTTCGC+TGG | + | chr6.4:2392665-2392684 | MS.gene47284:intron | 45.0% | |
GTACATTAAGACAACGGGAG+CGG | - | chr6.4:2393594-2393613 | None:intergenic | 45.0% | |
GTCAATACGTTGCTTGTGAG+TGG | + | chr6.4:2392029-2392048 | MS.gene47284:intron | 45.0% | |
TATTCTTCCCAGTCCATTGG+AGG | - | chr6.4:2394879-2394898 | None:intergenic | 45.0% | |
TCAAACTATTCCCCCAGAAG+CGG | - | chr6.4:2392998-2393017 | None:intergenic | 45.0% | |
TGAAGGAACAGAGCCCAAAA+AGG | + | chr6.4:2394925-2394944 | MS.gene47284:CDS | 45.0% | |
TTGGCATTGTCAGTTGAGCT+AGG | + | chr6.4:2391515-2391534 | MS.gene47284:intron | 45.0% | |
! | AGTACTGCGGAATTGGTTTC+AGG | + | chr6.4:2393099-2393118 | MS.gene47284:intron | 45.0% |
! | GCAAATCATACTACTCGGTG+TGG | - | chr6.4:2395781-2395800 | None:intergenic | 45.0% |
! | GTCGAGGTACTAGTTACACT+TGG | - | chr6.4:2392742-2392761 | None:intergenic | 45.0% |
! | TTGCTGTTCTATGGTCCTTC+AGG | + | chr6.4:2391227-2391246 | MS.gene47284:CDS | 45.0% |
!! | AGGCGGAAGCACTAAGATAT+TGG | - | chr6.4:2393321-2393340 | None:intergenic | 45.0% |
!! | GAATACATGGTAATGGTGGG+GGG | - | chr6.4:2395495-2395514 | None:intergenic | 45.0% |
!!! | GACGGTTGTTTTTTCTGGCA+GGG | + | chr6.4:2393719-2393738 | MS.gene47284:intron | 45.0% |
!! | ATAATTGTAAATATAAAAAT+AGG | + | chr6.4:2391559-2391578 | MS.gene47284:intron | 5.0% |
ACATTCTCTCCGCAGAACGA+TGG | + | chr6.4:2393501-2393520 | MS.gene47284:CDS | 50.0% | |
ACTCGCCATGGGGATTGATA+GGG | + | chr6.4:2395725-2395744 | MS.gene47284:intron | 50.0% | |
ATACGAGCAGCGAAACCAGA+AGG | - | chr6.4:2394623-2394642 | None:intergenic | 50.0% | |
ATTAAGACAACGGGAGCGGA+TGG | - | chr6.4:2393590-2393609 | None:intergenic | 50.0% | |
ATTTGTCTCTGCTCTCGACC+AGG | + | chr6.4:2396250-2396269 | MS.gene47284:intron | 50.0% | |
CAAGAGTCGACAACACGATC+GGG | - | chr6.4:2395040-2395059 | None:intergenic | 50.0% | |
CAAGTCCCTATCAATCCCCA+TGG | - | chr6.4:2395733-2395752 | None:intergenic | 50.0% | |
CACCAGGTCCAAACATTTGG+CGG | - | chr6.4:2391286-2391305 | None:intergenic | 50.0% | |
CAGCACCAGGTCCAAACATT+TGG | - | chr6.4:2391289-2391308 | None:intergenic | 50.0% | |
CATGGGGATTGATAGGGACT+TGG | + | chr6.4:2395731-2395750 | MS.gene47284:intron | 50.0% | |
CGTTCTGCGGAGAGAATGTT+GGG | - | chr6.4:2393500-2393519 | None:intergenic | 50.0% | |
GAAATGACTCCAAGCGATGC+AGG | + | chr6.4:2393178-2393197 | MS.gene47284:CDS | 50.0% | |
GAAGGGCTACAACTTCCTTC+TGG | + | chr6.4:2394605-2394624 | MS.gene47284:CDS | 50.0% | |
GATCCTGGACCACGTGTTTA+AGG | - | chr6.4:2396155-2396174 | None:intergenic | 50.0% | |
GCGAGTAGAAGAATTCCCAC+GGG | - | chr6.4:2395711-2395730 | None:intergenic | 50.0% | |
GCGGAGAAGAGCCATGATTA+GGG | - | chr6.4:2391267-2391286 | None:intergenic | 50.0% | |
GCTCTTCTCCGCCAAATGTT+TGG | + | chr6.4:2391275-2391294 | MS.gene47284:CDS | 50.0% | |
GGCGAGTAGAAGAATTCCCA+CGG | - | chr6.4:2395712-2395731 | None:intergenic | 50.0% | |
GGGAATTCTTCTACTCGCCA+TGG | + | chr6.4:2395713-2395732 | MS.gene47284:intron | 50.0% | |
GTCAGTTGAGCTAGGCCTTA+TGG | + | chr6.4:2391523-2391542 | MS.gene47284:intron | 50.0% | |
GTGGAGCTTACTGTTGGACA+CGG | - | chr6.4:2394700-2394719 | None:intergenic | 50.0% | |
GTTCCTTAAACACGTGGTCC+AGG | + | chr6.4:2396149-2396168 | MS.gene47284:intron | 50.0% | |
TACTCGCCATGGGGATTGAT+AGG | + | chr6.4:2395724-2395743 | MS.gene47284:intron | 50.0% | |
TAGATCGGCGTTGTCAACTG+CGG | + | chr6.4:2393969-2393988 | MS.gene47284:intron | 50.0% | |
TCGTTCTGCGGAGAGAATGT+TGG | - | chr6.4:2393501-2393520 | None:intergenic | 50.0% | |
TTCTATGGTCCTTCAGGCTC+TGG | + | chr6.4:2391233-2391252 | MS.gene47284:CDS | 50.0% | |
TTGGGTTTGAACTCGGGTGA+AGG | + | chr6.4:2391475-2391494 | MS.gene47284:intron | 50.0% | |
TTTGTCTCTGCTCTCGACCA+GGG | + | chr6.4:2396251-2396270 | MS.gene47284:intron | 50.0% | |
! | ATTGGTTTCAGGCTGGGAGT+AGG | + | chr6.4:2393110-2393129 | MS.gene47284:intron | 50.0% |
! | GGCTGCTTTATGCGCTATTG+AGG | + | chr6.4:2395269-2395288 | MS.gene47284:CDS | 50.0% |
! | GTTTGGACCTGGTGCTGAAA+AGG | + | chr6.4:2391292-2391311 | MS.gene47284:CDS | 50.0% |
! | GTTTTCTTGCCAGAGCCTGA+AGG | - | chr6.4:2391245-2391264 | None:intergenic | 50.0% |
! | TGCGGAATTGGTTTCAGGCT+GGG | + | chr6.4:2393104-2393123 | MS.gene47284:intron | 50.0% |
!! | ATTATCCTTGGTGCCGCTTC+TGG | + | chr6.4:2392982-2393001 | MS.gene47284:intron | 50.0% |
!! | TACTTTCTGGGATTCAGCCG+CGG | + | chr6.4:2394194-2394213 | MS.gene47284:intron | 50.0% |
!! | TTATCCTTGGTGCCGCTTCT+GGG | + | chr6.4:2392983-2393002 | MS.gene47284:intron | 50.0% |
!!! | GGACGGTTGTTTTTTCTGGC+AGG | + | chr6.4:2393718-2393737 | MS.gene47284:intron | 50.0% |
AGATCGGCGTTGTCAACTGC+GGG | + | chr6.4:2393970-2393989 | MS.gene47284:intron | 55.0% | |
AGTCGACAACACGATCGGGT+AGG | - | chr6.4:2395036-2395055 | None:intergenic | 55.0% | |
CAAGGCGCATCCTATGTTCC+TGG | - | chr6.4:2395569-2395588 | None:intergenic | 55.0% | |
CAGGAACATAGGATGCGCCT+TGG | + | chr6.4:2395567-2395586 | MS.gene47284:intron | 55.0% | |
CAGGGCCTTAGTTACAGTCG+TGG | + | chr6.4:2391961-2391980 | MS.gene47284:intron | 55.0% | |
CTCCGCCAAATGTTTGGACC+TGG | + | chr6.4:2391281-2391300 | MS.gene47284:CDS | 55.0% | |
CTGCTCTCGACCAGGGAATA+CGG | + | chr6.4:2396258-2396277 | MS.gene47284:intron | 55.0% | |
GACCTATAGTGTGGCACGGT+TGG | + | chr6.4:2396115-2396134 | MS.gene47284:intron | 55.0% | |
GAGCAGAGACAAATCCCTCG+AGG | - | chr6.4:2396244-2396263 | None:intergenic | 55.0% | |
GGCGGAGAAGAGCCATGATT+AGG | - | chr6.4:2391268-2391287 | None:intergenic | 55.0% | |
TAGGATGCGCCTTGGACAGA+AGG | + | chr6.4:2395575-2395594 | MS.gene47284:CDS | 55.0% | |
TCCAAGCGATGCAGGCTTTC+AGG | + | chr6.4:2393186-2393205 | MS.gene47284:CDS | 55.0% | |
TCCTGAAAGCCTGCATCGCT+TGG | - | chr6.4:2393190-2393209 | None:intergenic | 55.0% | |
TGCCAACCGTGCCACACTAT+AGG | - | chr6.4:2396120-2396139 | None:intergenic | 55.0% | |
! | CTCGGTGTGGGACTTAGACA+GGG | - | chr6.4:2395768-2395787 | None:intergenic | 55.0% |
! | CTGCGGAATTGGTTTCAGGC+TGG | + | chr6.4:2393103-2393122 | MS.gene47284:intron | 55.0% |
!! | ACATGGTAATGGTGGGGGGA+GGG | - | chr6.4:2395491-2395510 | None:intergenic | 55.0% |
!! | ACTCGGTGTGGGACTTAGAC+AGG | - | chr6.4:2395769-2395788 | None:intergenic | 55.0% |
!! | TACATGGTAATGGTGGGGGG+AGG | - | chr6.4:2395492-2395511 | None:intergenic | 55.0% |
!! | TATCCTTGGTGCCGCTTCTG+GGG | + | chr6.4:2392984-2393003 | MS.gene47284:intron | 55.0% |
ACACGCAACGCCGTATTCCC+TGG | - | chr6.4:2396271-2396290 | None:intergenic | 60.0% | |
GGCACGGTTGGCAGATGAGT+AGG | + | chr6.4:2396127-2396146 | MS.gene47284:intron | 60.0% | |
! | GCTAGGCCTTATGGACCTCC+TGG | + | chr6.4:2391532-2391551 | MS.gene47284:intron | 60.0% |
!! | ATCCTTGGTGCCGCTTCTGG+GGG | + | chr6.4:2392985-2393004 | MS.gene47284:intron | 60.0% |
!! | ATGGTAATGGTGGGGGGAGG+GGG | - | chr6.4:2395489-2395508 | None:intergenic | 60.0% |
!! | CATGGTAATGGTGGGGGGAG+GGG | - | chr6.4:2395490-2395509 | None:intergenic | 60.0% |
TTCCCCCAGAAGCGGCACCA+AGG | - | chr6.4:2392990-2393009 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 2391023 | 2396470 | 2391023 | ID=MS.gene47284 |
chr6.4 | mRNA | 2391023 | 2396470 | 2391023 | ID=MS.gene47284.t1;Parent=MS.gene47284 |
chr6.4 | exon | 2391023 | 2391106 | 2391023 | ID=MS.gene47284.t1.exon1;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2391023 | 2391106 | 2391023 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
chr6.4 | exon | 2391203 | 2391313 | 2391203 | ID=MS.gene47284.t1.exon2;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2391203 | 2391313 | 2391203 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
chr6.4 | exon | 2392536 | 2392568 | 2392536 | ID=MS.gene47284.t1.exon3;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2392536 | 2392568 | 2392536 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
chr6.4 | exon | 2393121 | 2393289 | 2393121 | ID=MS.gene47284.t1.exon4;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2393121 | 2393289 | 2393121 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
chr6.4 | exon | 2393458 | 2393639 | 2393458 | ID=MS.gene47284.t1.exon5;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2393458 | 2393639 | 2393458 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
chr6.4 | exon | 2394572 | 2394708 | 2394572 | ID=MS.gene47284.t1.exon6;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2394572 | 2394708 | 2394572 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
chr6.4 | exon | 2394848 | 2394946 | 2394848 | ID=MS.gene47284.t1.exon7;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2394848 | 2394946 | 2394848 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
chr6.4 | exon | 2395116 | 2395185 | 2395116 | ID=MS.gene47284.t1.exon8;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2395116 | 2395185 | 2395116 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
chr6.4 | exon | 2395268 | 2395342 | 2395268 | ID=MS.gene47284.t1.exon9;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2395268 | 2395342 | 2395268 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
chr6.4 | exon | 2395570 | 2395615 | 2395570 | ID=MS.gene47284.t1.exon10;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2395570 | 2395615 | 2395570 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
chr6.4 | exon | 2396412 | 2396470 | 2396412 | ID=MS.gene47284.t1.exon11;Parent=MS.gene47284.t1 |
chr6.4 | CDS | 2396412 | 2396470 | 2396412 | ID=cds.MS.gene47284.t1;Parent=MS.gene47284.t1 |
Gene Sequence |
Protein sequence |