Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58096.t1 | XP_003630220.2 | 95.3 | 1319 | 62 | 0 | 1 | 1319 | 1 | 1319 | 0.00E+00 | 2460.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58096.t1 | Q6Q4D0 | 48.6 | 1334 | 639 | 18 | 4 | 1318 | 5 | 1310 | 0.0e+00 | 1133.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58096.t1 | G7LD57 | 95.3 | 1319 | 62 | 0 | 1 | 1319 | 1 | 1319 | 0.0e+00 | 2460.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049261 | MS.gene58096 | 0.800919 | 1.15E-48 | -1.69E-46 |
| MS.gene049596 | MS.gene58096 | 0.849489 | 3.13E-60 | -1.69E-46 |
| MS.gene04985 | MS.gene58096 | 0.809544 | 1.80E-50 | -1.69E-46 |
| MS.gene049989 | MS.gene58096 | 0.824134 | 9.51E-54 | -1.69E-46 |
| MS.gene050071 | MS.gene58096 | 0.856684 | 2.72E-62 | -1.69E-46 |
| MS.gene050297 | MS.gene58096 | 0.865479 | 5.73E-65 | -1.69E-46 |
| MS.gene050648 | MS.gene58096 | 0.805182 | 1.51E-49 | -1.69E-46 |
| MS.gene050818 | MS.gene58096 | 0.831102 | 2.02E-55 | -1.69E-46 |
| MS.gene050894 | MS.gene58096 | 0.851083 | 1.12E-60 | -1.69E-46 |
| MS.gene05124 | MS.gene58096 | 0.827616 | 1.42E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene58096 | 0.802532 | 5.37E-49 | -1.69E-46 |
| MS.gene051698 | MS.gene58096 | 0.804768 | 1.84E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene58096 | 0.836239 | 1.05E-56 | -1.69E-46 |
| MS.gene053416 | MS.gene58096 | 0.801595 | 8.36E-49 | -1.69E-46 |
| MS.gene053417 | MS.gene58096 | 0.802234 | 6.18E-49 | -1.69E-46 |
| MS.gene054554 | MS.gene58096 | 0.800297 | 1.54E-48 | -1.69E-46 |
| MS.gene054585 | MS.gene58096 | 0.849207 | 3.75E-60 | -1.69E-46 |
| MS.gene054643 | MS.gene58096 | 0.846602 | 1.96E-59 | -1.69E-46 |
| MS.gene055251 | MS.gene58096 | 0.858853 | 6.19E-63 | -1.69E-46 |
| MS.gene055331 | MS.gene58096 | 0.872986 | 2.08E-67 | -1.69E-46 |
| MS.gene055411 | MS.gene58096 | 0.81008 | 1.38E-50 | -1.69E-46 |
| MS.gene055764 | MS.gene58096 | 0.816224 | 6.17E-52 | -1.69E-46 |
| MS.gene056266 | MS.gene58096 | -0.851775 | 7.12E-61 | -1.69E-46 |
| MS.gene056526 | MS.gene58096 | 0.802198 | 6.29E-49 | -1.69E-46 |
| MS.gene057483 | MS.gene58096 | 0.804917 | 1.72E-49 | -1.69E-46 |
| MS.gene058210 | MS.gene58096 | 0.806276 | 8.90E-50 | -1.69E-46 |
| MS.gene058818 | MS.gene58096 | 0.800627 | 1.32E-48 | -1.69E-46 |
| MS.gene058844 | MS.gene58096 | 0.816578 | 5.14E-52 | -1.69E-46 |
| MS.gene059778 | MS.gene58096 | 0.850199 | 1.98E-60 | -1.69E-46 |
| MS.gene060076 | MS.gene58096 | 0.818245 | 2.17E-52 | -1.69E-46 |
| MS.gene060359 | MS.gene58096 | 0.821782 | 3.36E-53 | -1.69E-46 |
| MS.gene06057 | MS.gene58096 | 0.841141 | 5.69E-58 | -1.69E-46 |
| MS.gene060855 | MS.gene58096 | 0.802836 | 4.64E-49 | -1.69E-46 |
| MS.gene061044 | MS.gene58096 | 0.807505 | 4.89E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58096.t1 | MTR_8g093100 | 97.574 | 1319 | 32 | 0 | 1 | 1319 | 1 | 1319 | 0.0 | 2662 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58096.t1 | AT3G18730 | 48.790 | 1322 | 630 | 19 | 16 | 1318 | 17 | 1310 | 0.0 | 1159 |
Find 250 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGAAGTGCTTAACATTTC+TGG | 0.089131 | 4.2:-9384515 | MS.gene58096:CDS |
| AGTAGGTTACATCACAATTT+AGG | 0.138361 | 4.2:-9391590 | MS.gene58096:CDS |
| GAAGAAACTTTACAATTTAC+AGG | 0.213785 | 4.2:-9386156 | MS.gene58096:intron |
| TGGCCCAACAACTTTGTTTC+AGG | 0.217721 | 4.2:-9385062 | MS.gene58096:intron |
| GTTTGACATTGACTCGTTAA+AGG | 0.223882 | 4.2:-9387260 | MS.gene58096:CDS |
| ACACTTTATGTGCTGAATAA+TGG | 0.232404 | 4.2:+9386956 | None:intergenic |
| AATTAATATTGGTAATGTTT+TGG | 0.234892 | 4.2:-9389221 | MS.gene58096:CDS |
| CCAAGCTTTCTACTTTAAAA+AGG | 0.242882 | 4.2:-9383951 | MS.gene58096:intron |
| TTCTTCAGCACCTTGATCTT+TGG | 0.259197 | 4.2:+9386173 | None:intergenic |
| AGTGAGCATCAAGCAGTTTC+TGG | 0.262583 | 4.2:-9388029 | MS.gene58096:CDS |
| GCAGGGACCTTGACTTTATC+AGG | 0.265053 | 4.2:-9383755 | MS.gene58096:CDS |
| TACCTTCTTCTTTGGCGTTC+CGG | 0.271035 | 4.2:+9392248 | None:intergenic |
| GCATTATAGGATTTCCTTCC+AGG | 0.277596 | 4.2:+9383464 | None:intergenic |
| GGAAACTGTTGAAAATATTA+TGG | 0.291437 | 4.2:-9386910 | MS.gene58096:CDS |
| AAATGTCAACTTGGGCTTGC+TGG | 0.292500 | 4.2:-9382046 | MS.gene58096:CDS |
| AGGGCAGAAGCTGCTGCTTC+TGG | 0.296208 | 4.2:-9381697 | MS.gene58096:CDS |
| GATAGCCTTTGCCAGCTTGC+AGG | 0.297613 | 4.2:-9383773 | MS.gene58096:CDS |
| GGACACAATCACCCTGTAAC+TGG | 0.299379 | 4.2:-9383997 | MS.gene58096:CDS |
| GAACAAACCTCAAGCATTAT+AGG | 0.300868 | 4.2:+9383451 | None:intergenic |
| CACTTTATGTGCTGAATAAT+GGG | 0.305515 | 4.2:+9386957 | None:intergenic |
| TTTGATCTATAAGTTGTCTT+TGG | 0.307239 | 4.2:+9388215 | None:intergenic |
| ACCACAGCATTCCCAGTTAC+AGG | 0.313274 | 4.2:+9383985 | None:intergenic |
| CAATTTAGGGAATGTGTATA+TGG | 0.313585 | 4.2:-9391576 | MS.gene58096:CDS |
| CACATAATTGAGGCTCTTGC+AGG | 0.330311 | 4.2:-9382016 | MS.gene58096:intron |
| TAGGATTTCCTTCCAGGTTC+AGG | 0.332150 | 4.2:+9383470 | None:intergenic |
| ACGGTGGTTACCTTCTTCTT+TGG | 0.332835 | 4.2:+9392240 | None:intergenic |
| ATGGTTGAAGCTTTCATTGA+TGG | 0.336748 | 4.2:-9386870 | MS.gene58096:intron |
| CCTGACTCCTGAAGATGAAT+TGG | 0.341764 | 4.2:-9388189 | MS.gene58096:CDS |
| GATATATTGCATGTCGGATT+GGG | 0.345438 | 4.2:-9387330 | MS.gene58096:CDS |
| GTAGGTTACATCACAATTTA+GGG | 0.345533 | 4.2:-9391589 | MS.gene58096:CDS |
| AATCAGTCCTAGTAAAATTC+AGG | 0.346057 | 4.2:-9387795 | MS.gene58096:intron |
| GACATCTCTCACAATTGTTT+AGG | 0.350263 | 4.2:-9385905 | MS.gene58096:intron |
| TGAATTTCTTTGACATGAAC+TGG | 0.352727 | 4.2:+9381657 | None:intergenic |
| GTACTTTCACACCTTTGTAT+AGG | 0.354070 | 4.2:-9384095 | MS.gene58096:intron |
| ACAATGCTGTCTCAAAGTTT+TGG | 0.361105 | 4.2:-9382077 | MS.gene58096:CDS |
| CCAATTCATCTTCAGGAGTC+AGG | 0.361308 | 4.2:+9388189 | None:intergenic |
| ATCTTGGGGAAGTGCATTAC+CGG | 0.361904 | 4.2:-9391454 | MS.gene58096:CDS |
| TCATCATCCAATTCATCTTC+AGG | 0.367415 | 4.2:+9388182 | None:intergenic |
| GCCCAAGTTGACATTTCTTA+AGG | 0.370537 | 4.2:+9382053 | None:intergenic |
| AGAAGCGTGTGATGCATATA+AGG | 0.372974 | 4.2:-9389179 | MS.gene58096:CDS |
| TGGCAGGTTCTCCCGGAGTA+TGG | 0.373131 | 4.2:-9387696 | MS.gene58096:intron |
| GCTAAAGGGTATATTAATCT+TGG | 0.373279 | 4.2:-9391470 | MS.gene58096:CDS |
| CTAAAGGGTATATTAATCTT+GGG | 0.376172 | 4.2:-9391469 | MS.gene58096:CDS |
| AGTATCTGCTGCAGGAAAAC+GGG | 0.377233 | 4.2:-9391214 | MS.gene58096:CDS |
| GATTTGCATTGTAATCGATT+TGG | 0.378583 | 4.2:-9385082 | MS.gene58096:CDS |
| GCACTGGTGAAAATTAATAT+TGG | 0.384243 | 4.2:-9389232 | MS.gene58096:CDS |
| ATAGTGAAGATAATCAAGTT+AGG | 0.388166 | 4.2:-9381717 | MS.gene58096:CDS |
| TAACATTGGTATGCTTGAAA+TGG | 0.390187 | 4.2:-9391705 | MS.gene58096:CDS |
| AACGTACTTGTATCATAATT+AGG | 0.390793 | 4.2:+9387909 | None:intergenic |
| TTGTCAGACTTCTGGGTGAC+TGG | 0.394961 | 4.2:+9388060 | None:intergenic |
| TTGCCCAACGCGCTTCTTCA+CGG | 0.397193 | 4.2:+9392221 | None:intergenic |
| AAGTATCTGCTGCAGGAAAA+CGG | 0.399328 | 4.2:-9391215 | MS.gene58096:CDS |
| TGGTGTACAGCTTTCTGCCT+TGG | 0.400503 | 4.2:-9388588 | MS.gene58096:CDS |
| GCTGTTGAAGCAGACCTTCC+TGG | 0.402121 | 4.2:-9388608 | MS.gene58096:CDS |
| TTTAGAGGATGAGGATGCTT+TGG | 0.402342 | 4.2:-9391372 | MS.gene58096:CDS |
| TGGAAAATGTACAAAACAAT+TGG | 0.406577 | 4.2:-9389856 | MS.gene58096:CDS |
| TTATGAGAAGGCGCTTGGTT+TGG | 0.408365 | 4.2:-9391402 | MS.gene58096:CDS |
| TAGTATCAAGTTTCTGCTCC+TGG | 0.409281 | 4.2:+9381809 | None:intergenic |
| TGGTTTGGCGAAGTCTTTAG+AGG | 0.410254 | 4.2:-9391387 | MS.gene58096:CDS |
| TTTGGGATGGCAGGTTCTCC+CGG | 0.414807 | 4.2:-9387703 | MS.gene58096:intron |
| ATACTTGGAGGCACTGGTAT+TGG | 0.417390 | 4.2:-9383728 | MS.gene58096:CDS |
| CAAAACAATTGGCAACTTAG+AGG | 0.419791 | 4.2:-9389845 | MS.gene58096:intron |
| AGTTTCGCTGAAGTTCTTAT+CGG | 0.423030 | 4.2:-9392125 | MS.gene58096:CDS |
| TTGAAATTTGCTGAGTGAAA+TGG | 0.425143 | 4.2:+9381623 | None:intergenic |
| TAAAGAAGCAGTTAAAGTTA+TGG | 0.429094 | 4.2:-9391318 | MS.gene58096:CDS |
| TGCATCGATCAATGGTGTTA+TGG | 0.430412 | 4.2:+9385958 | None:intergenic |
| GCTCAATGACCTGGAACGTC+TGG | 0.430819 | 4.2:+9387596 | None:intergenic |
| AATCGGCGAAATCTGCTTAC+CGG | 0.431632 | 4.2:-9392267 | MS.gene58096:CDS |
| AGATATATTGCATGTCGGAT+TGG | 0.434560 | 4.2:-9387331 | MS.gene58096:CDS |
| ACTTTATCAGGACTAATACT+TGG | 0.437994 | 4.2:-9383743 | MS.gene58096:CDS |
| TTAGAACCACTAGGAAAGTA+AGG | 0.438324 | 4.2:+9387555 | None:intergenic |
| CCACCGTGAAGAAGCGCGTT+GGG | 0.439179 | 4.2:-9392224 | MS.gene58096:CDS |
| TAACAGAACCATTGCTCAAA+GGG | 0.439323 | 4.2:-9383588 | MS.gene58096:CDS |
| CAATCCTCTCCTGAGTATAT+TGG | 0.444261 | 4.2:+9391658 | None:intergenic |
| AACGAAGACTTATTATTTGG+CGG | 0.444910 | 4.2:+9391755 | None:intergenic |
| TTCCATCACTGACCTGAACC+TGG | 0.445947 | 4.2:-9383482 | MS.gene58096:CDS |
| TATACCTGAAACAAAGTTGT+TGG | 0.451537 | 4.2:+9385058 | None:intergenic |
| GATGATTGTATGTCAAATAG+TGG | 0.453901 | 4.2:-9388257 | MS.gene58096:CDS |
| ATTGCTGATGCATTGGACTC+TGG | 0.454023 | 4.2:-9384122 | MS.gene58096:CDS |
| ATGGTGTTATGGACAAATCT+TGG | 0.456050 | 4.2:+9385969 | None:intergenic |
| CAAGCTGCAGAAACACTCTA+TGG | 0.461807 | 4.2:-9381538 | MS.gene58096:CDS |
| GACTGATACATTGACATAAG+AGG | 0.463561 | 4.2:+9388152 | None:intergenic |
| GGCGAAGTCTTTAGAGGATG+AGG | 0.470864 | 4.2:-9391381 | MS.gene58096:CDS |
| CTAAAACTTCCAGACGTTCC+AGG | 0.472289 | 4.2:-9387605 | MS.gene58096:CDS |
| AAGGTTGGGTGATTCATATC+TGG | 0.474819 | 4.2:-9389944 | MS.gene58096:CDS |
| CGAAAGGTATTCACAACATC+AGG | 0.475544 | 4.2:-9385130 | MS.gene58096:CDS |
| GAAGTCAAATGAAGAGATAG+AGG | 0.478986 | 4.2:-9388327 | MS.gene58096:CDS |
| GCGAAACTTCATAATCGATT+CGG | 0.486422 | 4.2:+9392140 | None:intergenic |
| ATGACCTTTGTGACAGGCAA+AGG | 0.486707 | 4.2:-9389963 | MS.gene58096:CDS |
| AATTTGACCTATCATATTGT+GGG | 0.487595 | 4.2:-9383549 | MS.gene58096:CDS |
| AATACGTTAAAGCTCTCAAA+TGG | 0.488240 | 4.2:-9392165 | MS.gene58096:CDS |
| GAGATTAGCGAGTATGATGA+TGG | 0.489297 | 4.2:-9391617 | MS.gene58096:CDS |
| TGGCAAAGGCTATCGACAAC+CGG | 0.489738 | 4.2:+9383782 | None:intergenic |
| GTCAACCTGCTTTGTAGAGT+TGG | 0.492455 | 4.2:+9388082 | None:intergenic |
| CATTGTCAAGGGGAAGCTAA+AGG | 0.492547 | 4.2:-9391485 | MS.gene58096:CDS |
| TCAAATGGTATGAAAAGAGT+TGG | 0.494262 | 4.2:-9389876 | MS.gene58096:CDS |
| AGTATGATGATGGGCGTAGT+AGG | 0.494266 | 4.2:-9391607 | MS.gene58096:CDS |
| GAAGAAGCCTTGTGTGCTGC+TGG | 0.494813 | 4.2:-9387289 | MS.gene58096:CDS |
| ATGTTAGCCCACAATATGAT+AGG | 0.495892 | 4.2:+9383542 | None:intergenic |
| GTCCTTAAGAAATGTCAACT+TGG | 0.496426 | 4.2:-9382055 | MS.gene58096:CDS |
| GAAACTTGATACTATGAAAG+TGG | 0.497234 | 4.2:-9381800 | MS.gene58096:CDS |
| TACGACCCCTTTCAAGTCAC+AGG | 0.497390 | 4.2:-9381501 | MS.gene58096:CDS |
| GTTTCAGAGCAACAATCATC+AGG | 0.500220 | 4.2:+9388293 | None:intergenic |
| TCCTCAGTCCCTTTGAGCAA+TGG | 0.500926 | 4.2:+9383580 | None:intergenic |
| TAAAAGCTGTTCACAGAACC+AGG | 0.501606 | 4.2:-9381827 | MS.gene58096:CDS |
| TGCTGATAATTCTGTTTCAA+CGG | 0.502372 | 4.2:-9381881 | MS.gene58096:CDS |
| CAATTCATCTTCAGGAGTCA+GGG | 0.504803 | 4.2:+9388190 | None:intergenic |
| ATCTTACGGCGACTTAACTC+TGG | 0.506663 | 4.2:-9385104 | MS.gene58096:CDS |
| TTCCAGGTTCAGGTCAGTGA+TGG | 0.506946 | 4.2:+9383480 | None:intergenic |
| CATAAAATTGGACATTGTCA+AGG | 0.507240 | 4.2:-9391497 | MS.gene58096:CDS |
| ATTGTCAAGGGGAAGCTAAA+GGG | 0.508598 | 4.2:-9391484 | MS.gene58096:CDS |
| AATTAGGCAAGTCTTCTAAC+GGG | 0.512043 | 4.2:+9387925 | None:intergenic |
| ATGTACGTAGACTGCTGCAA+GGG | 0.513069 | 4.2:-9386209 | MS.gene58096:CDS |
| CGAGCGCAAGTATCTGCTGC+AGG | 0.513407 | 4.2:-9391222 | MS.gene58096:CDS |
| TGCTGAGTGAAATGGCAGTT+GGG | 0.513677 | 4.2:+9381631 | None:intergenic |
| TCTTATTATGAGAAGGCGCT+TGG | 0.514420 | 4.2:-9391407 | MS.gene58096:CDS |
| GAGATGTAGCCTCGGCTAGA+GGG | 0.515123 | 4.2:-9391253 | MS.gene58096:CDS |
| TCCTTAAGAAATGTCAACTT+GGG | 0.518872 | 4.2:-9382054 | MS.gene58096:CDS |
| CGGATTCTCTTTCAGACTAA+CGG | 0.519515 | 4.2:+9391775 | None:intergenic |
| CAAAGAGCTAGCACGCAGCT+AGG | 0.521257 | 4.2:-9391890 | MS.gene58096:CDS |
| ATACCTGAAACAAAGTTGTT+GGG | 0.522135 | 4.2:+9385059 | None:intergenic |
| ATAAAATTGGACATTGTCAA+GGG | 0.523025 | 4.2:-9391496 | MS.gene58096:CDS |
| ATGCATATAAGGAGAGCTAC+AGG | 0.523215 | 4.2:-9389168 | MS.gene58096:intron |
| AGTAGAACTCACATCATGTA+GGG | 0.524653 | 4.2:+9387473 | None:intergenic |
| AAGTAGAACTCACATCATGT+AGG | 0.524815 | 4.2:+9387472 | None:intergenic |
| GCGCGTTGGGCAAACGTCAT+CGG | 0.525249 | 4.2:-9392211 | MS.gene58096:CDS |
| TACCGGAACGCCAAAGAAGA+AGG | 0.526433 | 4.2:-9392250 | MS.gene58096:CDS |
| GGAATGTGTATATGGAATTG+AGG | 0.527177 | 4.2:-9391568 | MS.gene58096:CDS |
| TGGAGTTGTTCACATAATTG+AGG | 0.528217 | 4.2:-9382026 | MS.gene58096:CDS |
| GAAAGTAGTAGTTCTTTCAA+AGG | 0.532731 | 4.2:-9387648 | MS.gene58096:CDS |
| ATGTAGGGAATGATGCATCA+TGG | 0.533394 | 4.2:+9387488 | None:intergenic |
| ATAGCCTTTGCCAGCTTGCA+GGG | 0.534052 | 4.2:-9383772 | MS.gene58096:CDS |
| ACAACATCAGGTCAATCTTA+CGG | 0.534414 | 4.2:-9385118 | MS.gene58096:CDS |
| AAATACTTTAGACGATCAGC+TGG | 0.535628 | 4.2:-9381749 | MS.gene58096:CDS |
| AAATGCGATACAGATGTCTC+TGG | 0.536190 | 4.2:-9387534 | MS.gene58096:CDS |
| TTTATCAGATAACAGCAGCC+TGG | 0.536365 | 4.2:-9381917 | MS.gene58096:intron |
| GATGTGCCTGTGACTTGAAA+GGG | 0.536434 | 4.2:+9381495 | None:intergenic |
| CAGAAACACTCTATGGTTCG+TGG | 0.537191 | 4.2:-9381531 | MS.gene58096:CDS |
| GTCTGTGGAACCAAAGATCA+AGG | 0.538998 | 4.2:-9386183 | MS.gene58096:CDS |
| AAATTTGACCTATCATATTG+TGG | 0.539688 | 4.2:-9383550 | MS.gene58096:CDS |
| AATTCAACAAGGCAATCAAA+TGG | 0.539789 | 4.2:-9389891 | MS.gene58096:CDS |
| CCTCTTCATACTTCTGAGTC+CGG | 0.540010 | 4.2:+9391435 | None:intergenic |
| TTATCAGGACTAATACTTGG+AGG | 0.540389 | 4.2:-9383740 | MS.gene58096:CDS |
| ATTGATGCTTATAATAACAT+TGG | 0.540583 | 4.2:-9391719 | MS.gene58096:CDS |
| TAGTGAAGATAATCAAGTTA+GGG | 0.543361 | 4.2:-9381716 | MS.gene58096:CDS |
| CCACAGCATTCCCAGTTACA+GGG | 0.543787 | 4.2:+9383986 | None:intergenic |
| TCATCCTTGCTTTCTCAACA+AGG | 0.543876 | 4.2:+9391180 | None:intergenic |
| GGACTAATACTTGGAGGCAC+TGG | 0.546493 | 4.2:-9383734 | MS.gene58096:CDS |
| ATTCAGCACATAAAGTGTGC+TGG | 0.546576 | 4.2:-9386951 | MS.gene58096:CDS |
| TGATGATGAAATCATTGCAT+CGG | 0.546953 | 4.2:-9386002 | MS.gene58096:CDS |
| AAGTCAAGGTCCCTGCAAGC+TGG | 0.547103 | 4.2:+9383762 | None:intergenic |
| AGCAAGGATGATCGCTGCAT+GGG | 0.547239 | 4.2:-9391168 | MS.gene58096:CDS |
| CAGCAAGATTAAGCTCCTCC+AGG | 0.548771 | 4.2:+9381899 | None:intergenic |
| TTGCTGAGTGAAATGGCAGT+TGG | 0.550989 | 4.2:+9381630 | None:intergenic |
| AATCAAACTTTCTTACAGCA+AGG | 0.551137 | 4.2:+9381418 | None:intergenic |
| GATGGACTCAGAGCTCAAAT+CGG | 0.551160 | 4.2:-9392284 | MS.gene58096:CDS |
| CACATTTAGATCCATACTCC+GGG | 0.551397 | 4.2:+9387685 | None:intergenic |
| AGGTCCCTGCAAGCTGGCAA+AGG | 0.552004 | 4.2:+9383768 | None:intergenic |
| GGGAATGATGCATCATGGGA+TGG | 0.552972 | 4.2:+9387493 | None:intergenic |
| AGAAACATCTAGATCTAGCA+AGG | 0.555236 | 4.2:-9391937 | MS.gene58096:CDS |
| AAAGGCTCGAGTCCAAATAC+AGG | 0.557390 | 4.2:-9387630 | MS.gene58096:CDS |
| TAATTAGGCAAGTCTTCTAA+CGG | 0.558109 | 4.2:+9387924 | None:intergenic |
| TGTATATGGAATTGAGGAAG+TGG | 0.558312 | 4.2:-9391562 | MS.gene58096:CDS |
| GCACATTTAGATCCATACTC+CGG | 0.560871 | 4.2:+9387684 | None:intergenic |
| TAGCGAATGACCTTTGTGAC+AGG | 0.560949 | 4.2:-9389969 | MS.gene58096:CDS |
| AATTTCAAGTGCTATTACAA+AGG | 0.562599 | 4.2:-9381608 | MS.gene58096:CDS |
| GGAATGATGCATCATGGGAT+GGG | 0.562867 | 4.2:+9387494 | None:intergenic |
| AACGCCTTGTTGAGAAAGCA+AGG | 0.563106 | 4.2:-9391184 | MS.gene58096:CDS |
| CGATGCACTGCATTCACAGA+TGG | 0.565109 | 4.2:-9385942 | MS.gene58096:CDS |
| AGGAAATCCTATAATGCTTG+AGG | 0.565518 | 4.2:-9383458 | MS.gene58096:intron |
| GACACAATCACCCTGTAACT+GGG | 0.568974 | 4.2:-9383996 | MS.gene58096:CDS |
| TGATGTGCCTGTGACTTGAA+AGG | 0.569787 | 4.2:+9381494 | None:intergenic |
| TCATACCAACTCTACAAAGC+AGG | 0.569932 | 4.2:-9388087 | MS.gene58096:CDS |
| CTTTGTGACAGGCAAAGGTT+GGG | 0.570383 | 4.2:-9389958 | MS.gene58096:CDS |
| AATATGAGTGGTCTAAAACT+AGG | 0.571267 | 4.2:-9383809 | MS.gene58096:CDS |
| CATTATCCATTTCTCAACAA+AGG | 0.571546 | 4.2:-9381464 | MS.gene58096:CDS |
| GATGATCGCTGCATGGGAGA+AGG | 0.573409 | 4.2:-9391162 | MS.gene58096:intron |
| TGCAGAGATATATTGCATGT+CGG | 0.573604 | 4.2:-9387336 | MS.gene58096:intron |
| CGCTATGAAGAATATGAAGA+GGG | 0.574039 | 4.2:-9391534 | MS.gene58096:CDS |
| CCTTTGTGACAGGCAAAGGT+TGG | 0.574193 | 4.2:-9389959 | MS.gene58096:CDS |
| AGAGATGTAGCCTCGGCTAG+AGG | 0.577083 | 4.2:-9391254 | MS.gene58096:CDS |
| AAGCAAGGATGATCGCTGCA+TGG | 0.577140 | 4.2:-9391169 | MS.gene58096:CDS |
| GTCACAACTTGTCAATCCCT+CGG | 0.578288 | 4.2:-9392091 | MS.gene58096:CDS |
| ACGCTATGAAGAATATGAAG+AGG | 0.578906 | 4.2:-9391535 | MS.gene58096:CDS |
| TGGAGGAGATCTAGAATCGC+TGG | 0.579552 | 4.2:-9386931 | MS.gene58096:CDS |
| CTGATCACCAGCAGCACACA+AGG | 0.580672 | 4.2:+9387282 | None:intergenic |
| GTAACAGAACCATTGCTCAA+AGG | 0.583157 | 4.2:-9383589 | MS.gene58096:CDS |
| GCTGAACCTTACTTTCCTAG+TGG | 0.585760 | 4.2:-9387561 | MS.gene58096:CDS |
| AGTGGAATGCTCAAGCAGAA+AGG | 0.588930 | 4.2:-9387958 | MS.gene58096:CDS |
| ATCACTGACCTGAACCTGGA+AGG | 0.591981 | 4.2:-9383478 | MS.gene58096:CDS |
| ACCACCGTGAAGAAGCGCGT+TGG | 0.592374 | 4.2:-9392225 | MS.gene58096:CDS |
| TATATCGTTGCTCAATGACC+TGG | 0.592451 | 4.2:+9387587 | None:intergenic |
| TCAATGTATCAGTCTATCAA+AGG | 0.595400 | 4.2:-9388143 | MS.gene58096:CDS |
| TGGTCTAAAACTAGGCAGAC+CGG | 0.596349 | 4.2:-9383801 | MS.gene58096:CDS |
| TAAAGGGTATATTAATCTTG+GGG | 0.597879 | 4.2:-9391468 | MS.gene58096:CDS |
| CCAGCAGAAAAGAAATCAGA+GGG | 0.601683 | 4.2:-9387205 | MS.gene58096:intron |
| CTGCTGCAAGGGGTTGTCTG+TGG | 0.604385 | 4.2:-9386198 | MS.gene58096:CDS |
| CCAACCTTTGCCTGTCACAA+AGG | 0.604669 | 4.2:+9389959 | None:intergenic |
| ATTGTGAATTTGCGAAGGAG+AGG | 0.604841 | 4.2:-9389999 | MS.gene58096:CDS |
| AGATTAGCGAGTATGATGAT+GGG | 0.605604 | 4.2:-9391616 | MS.gene58096:CDS |
| ATTGAAGATTTGCGACGAAG+AGG | 0.606184 | 4.2:-9391639 | MS.gene58096:CDS |
| ACGGAGATAGATTTCACCGA+GGG | 0.606325 | 4.2:+9392075 | None:intergenic |
| CATGATCAGATTTGATGACG+AGG | 0.606387 | 4.2:-9388546 | MS.gene58096:CDS |
| TGTAGGGAATGATGCATCAT+GGG | 0.607187 | 4.2:+9387489 | None:intergenic |
| ACTCAAGAGAGATGTAGCCT+CGG | 0.607299 | 4.2:-9391261 | MS.gene58096:CDS |
| ATGATTGTATGTCAAATAGT+GGG | 0.608032 | 4.2:-9388256 | MS.gene58096:CDS |
| GGTGATTCATATCTGGATGT+CGG | 0.608044 | 4.2:-9389937 | MS.gene58096:CDS |
| GGCGCGGTCTTATTATGAGA+AGG | 0.609532 | 4.2:-9391414 | MS.gene58096:CDS |
| GAATGCAGTGCATCGATCAA+TGG | 0.610466 | 4.2:+9385950 | None:intergenic |
| TTGCTTATAGGGGCAAGCAC+TGG | 0.613554 | 4.2:-9389248 | MS.gene58096:intron |
| GTGTTATGGACAAATCTTGG+AGG | 0.614059 | 4.2:+9385972 | None:intergenic |
| AAGGCAGAAAGCTGTACACC+AGG | 0.614490 | 4.2:+9388590 | None:intergenic |
| ATCCACATGCATCAGTAAGA+CGG | 0.616095 | 4.2:+9384489 | None:intergenic |
| GTGCAGTGTCCCTCTAGCCG+AGG | 0.623267 | 4.2:+9391244 | None:intergenic |
| TCAGTATTGTGAATTTGCGA+AGG | 0.626543 | 4.2:-9390004 | MS.gene58096:intron |
| GAAAGTGGATGATAATCAAG+AGG | 0.626899 | 4.2:-9381785 | MS.gene58096:CDS |
| ATATATTGCATGTCGGATTG+GGG | 0.628585 | 4.2:-9387329 | MS.gene58096:CDS |
| TCCAGCAGAAAAGAAATCAG+AGG | 0.629533 | 4.2:-9387206 | MS.gene58096:CDS |
| TGATGACGAGGATGATGAAG+TGG | 0.635870 | 4.2:-9387976 | MS.gene58096:CDS |
| CATCGGAAAATTGCTCAAGA+CGG | 0.637389 | 4.2:+9392056 | None:intergenic |
| ATCAGATAACAGCAGCCTGG+AGG | 0.641615 | 4.2:-9381914 | MS.gene58096:intron |
| TATTAGTCCTGATAAAGTCA+AGG | 0.643837 | 4.2:+9383748 | None:intergenic |
| ACGAGGCGGCCAATATACTC+AGG | 0.644083 | 4.2:-9391667 | MS.gene58096:CDS |
| AATGTACGTAGACTGCTGCA+AGG | 0.644632 | 4.2:-9386210 | MS.gene58096:CDS |
| CATCATCAGAAAGAATTACA+CGG | 0.645079 | 4.2:+9387994 | None:intergenic |
| CAGAAAGCTGTACACCAGGA+AGG | 0.647923 | 4.2:+9388594 | None:intergenic |
| CAGCACATAAAGTGTGCTGG+AGG | 0.648707 | 4.2:-9386948 | MS.gene58096:CDS |
| GTATCTGCTGCAGGAAAACG+GGG | 0.648754 | 4.2:-9391213 | MS.gene58096:CDS |
| GGAGCATCTGCAAAATAACA+TGG | 0.649768 | 4.2:-9386889 | MS.gene58096:CDS |
| GACAATGGAGAAACTTCGAA+AGG | 0.650768 | 4.2:-9385146 | MS.gene58096:CDS |
| ACCATTGCTCAAAGGGACTG+AGG | 0.651690 | 4.2:-9383581 | MS.gene58096:CDS |
| TTGATGACGAGGATGAGACC+AGG | 0.652930 | 4.2:-9388535 | MS.gene58096:intron |
| CCGGACTCAGAAGTATGAAG+AGG | 0.653448 | 4.2:-9391435 | MS.gene58096:CDS |
| GAAACATCTAGATCTAGCAA+GGG | 0.658489 | 4.2:-9391936 | MS.gene58096:CDS |
| GCTTGATAACTTGCACGAGG+CGG | 0.663492 | 4.2:-9391681 | MS.gene58096:CDS |
| CTCAGAAGTATGAAGAGGCG+CGG | 0.664193 | 4.2:-9391430 | MS.gene58096:CDS |
| CCCTGTAACTGGGAATGCTG+TGG | 0.664904 | 4.2:-9383986 | MS.gene58096:CDS |
| TAAAATTGGACATTGTCAAG+GGG | 0.672258 | 4.2:-9391495 | MS.gene58096:CDS |
| AACCGTCTTACTGATGCATG+TGG | 0.676038 | 4.2:-9384491 | MS.gene58096:CDS |
| GCGGCCAATATACTCAGGAG+AGG | 0.678149 | 4.2:-9391662 | MS.gene58096:CDS |
| GATTTATCGTACCTATACAA+AGG | 0.678847 | 4.2:+9384084 | None:intergenic |
| TGTACGTAGACTGCTGCAAG+GGG | 0.679759 | 4.2:-9386208 | MS.gene58096:CDS |
| CCCAACGCGCTTCTTCACGG+TGG | 0.680138 | 4.2:+9392224 | None:intergenic |
| GTATCGCATTTAGAACCACT+AGG | 0.698771 | 4.2:+9387546 | None:intergenic |
| ATGTGCCTGTGACTTGAAAG+GGG | 0.702623 | 4.2:+9381496 | None:intergenic |
| AATTCTTTCTGATGATGACG+AGG | 0.714829 | 4.2:-9387988 | MS.gene58096:CDS |
| GGCGATATACTCAAGAACAG+AGG | 0.723753 | 4.2:-9392190 | MS.gene58096:CDS |
| GACGGAGATAGATTTCACCG+AGG | 0.730813 | 4.2:+9392074 | None:intergenic |
| GGAGCTTGATAACTTGCACG+AGG | 0.747640 | 4.2:-9391684 | MS.gene58096:CDS |
| GAAGCTCAGAAAATTCAACA+AGG | 0.757883 | 4.2:-9389902 | MS.gene58096:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 9381420 | 9392305 | 9381420 | ID=MS.gene58096 |
| chr4.2 | mRNA | 9381420 | 9392305 | 9381420 | ID=MS.gene58096.t1;Parent=MS.gene58096 |
| chr4.2 | exon | 9392042 | 9392305 | 9392042 | ID=MS.gene58096.t1.exon1;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9392042 | 9392305 | 9392042 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9391163 | 9391960 | 9391163 | ID=MS.gene58096.t1.exon2;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9391163 | 9391960 | 9391163 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9389846 | 9390022 | 9389846 | ID=MS.gene58096.t1.exon3;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9389846 | 9390022 | 9389846 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9389169 | 9389260 | 9389169 | ID=MS.gene58096.t1.exon4;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9389169 | 9389260 | 9389169 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9388536 | 9388634 | 9388536 | ID=MS.gene58096.t1.exon5;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9388536 | 9388634 | 9388536 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9387916 | 9388379 | 9387916 | ID=MS.gene58096.t1.exon6;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9387916 | 9388379 | 9387916 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9387796 | 9387827 | 9387796 | ID=MS.gene58096.t1.exon7;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9387796 | 9387827 | 9387796 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9387485 | 9387712 | 9387485 | ID=MS.gene58096.t1.exon8;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9387485 | 9387712 | 9387485 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9387206 | 9387353 | 9387206 | ID=MS.gene58096.t1.exon9;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9387206 | 9387353 | 9387206 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9386871 | 9386987 | 9386871 | ID=MS.gene58096.t1.exon10;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9386871 | 9386987 | 9386871 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9386157 | 9386257 | 9386157 | ID=MS.gene58096.t1.exon11;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9386157 | 9386257 | 9386157 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9385906 | 9386029 | 9385906 | ID=MS.gene58096.t1.exon12;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9385906 | 9386029 | 9385906 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9385063 | 9385175 | 9385063 | ID=MS.gene58096.t1.exon13;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9385063 | 9385175 | 9385063 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9384456 | 9384567 | 9384456 | ID=MS.gene58096.t1.exon14;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9384456 | 9384567 | 9384456 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9384096 | 9384200 | 9384096 | ID=MS.gene58096.t1.exon15;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9384096 | 9384200 | 9384096 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9383952 | 9384018 | 9383952 | ID=MS.gene58096.t1.exon16;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9383952 | 9384018 | 9383952 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9383724 | 9383844 | 9383724 | ID=MS.gene58096.t1.exon17;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9383724 | 9383844 | 9383724 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9383459 | 9383626 | 9383459 | ID=MS.gene58096.t1.exon18;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9383459 | 9383626 | 9383459 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9382017 | 9382134 | 9382017 | ID=MS.gene58096.t1.exon19;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9382017 | 9382134 | 9382017 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| chr4.2 | exon | 9381420 | 9381931 | 9381420 | ID=MS.gene58096.t1.exon20;Parent=MS.gene58096.t1 |
| chr4.2 | CDS | 9381420 | 9381931 | 9381420 | ID=cds.MS.gene58096.t1;Parent=MS.gene58096.t1 |
| Gene Sequence |
| Protein sequence |
