Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049372.t1 | XP_003602463.1 | 98.1 | 322 | 6 | 0 | 1 | 322 | 1 | 322 | 3.70E-170 | 607.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049372.t1 | Q9FLC0 | 73.3 | 318 | 81 | 1 | 9 | 322 | 7 | 324 | 6.3e-126 | 451.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049372.t1 | G7J9S2 | 98.1 | 322 | 6 | 0 | 1 | 322 | 1 | 322 | 2.7e-170 | 607.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049372 | MS.gene06498 | 0.802358 | 5.83E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26286 | MS.gene049372 | PPI |
| MS.gene049372 | MS.gene017207 | PPI |
| MS.gene49484 | MS.gene049372 | PPI |
| MS.gene049372 | MS.gene98878 | PPI |
| MS.gene049372 | MS.gene41565 | PPI |
| MS.gene049488 | MS.gene049372 | PPI |
| MS.gene26287 | MS.gene049372 | PPI |
| MS.gene049372 | MS.gene017208 | PPI |
| MS.gene049372 | MS.gene008562 | PPI |
| MS.gene049372 | MS.gene009691 | PPI |
| MS.gene009689 | MS.gene049372 | PPI |
| MS.gene049372 | MS.gene38511 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049372.t1 | MTR_3g094670 | 98.137 | 322 | 6 | 0 | 1 | 322 | 1 | 322 | 0.0 | 643 |
| MS.gene049372.t1 | MTR_3g094650 | 88.509 | 322 | 37 | 0 | 1 | 322 | 1 | 322 | 0.0 | 583 |
| MS.gene049372.t1 | MTR_3g094630 | 92.547 | 322 | 24 | 0 | 1 | 322 | 1 | 322 | 0.0 | 572 |
| MS.gene049372.t1 | MTR_5g083860 | 78.914 | 313 | 65 | 1 | 11 | 322 | 13 | 325 | 0.0 | 508 |
| MS.gene049372.t1 | MTR_3g466200 | 68.153 | 314 | 99 | 1 | 10 | 322 | 7 | 320 | 4.18e-161 | 452 |
| MS.gene049372.t1 | MTR_2g084080 | 66.987 | 312 | 101 | 1 | 11 | 322 | 8 | 317 | 6.36e-153 | 431 |
| MS.gene049372.t1 | MTR_2g084020 | 65.635 | 323 | 105 | 4 | 1 | 322 | 1 | 318 | 3.17e-149 | 422 |
| MS.gene049372.t1 | MTR_2g084110 | 65.064 | 312 | 107 | 1 | 11 | 322 | 8 | 317 | 4.30e-149 | 422 |
| MS.gene049372.t1 | MTR_2g084090 | 65.064 | 312 | 108 | 1 | 11 | 322 | 8 | 318 | 2.86e-148 | 419 |
| MS.gene049372.t1 | MTR_2g084010 | 64.706 | 323 | 108 | 3 | 1 | 322 | 1 | 318 | 1.29e-146 | 416 |
| MS.gene049372.t1 | MTR_5g074970 | 64.309 | 311 | 108 | 3 | 14 | 322 | 17 | 326 | 4.12e-145 | 412 |
| MS.gene049372.t1 | MTR_2g084000 | 61.465 | 314 | 117 | 3 | 11 | 322 | 8 | 319 | 3.70e-139 | 397 |
| MS.gene049372.t1 | MTR_7g072510 | 58.917 | 314 | 127 | 1 | 9 | 322 | 1 | 312 | 5.41e-136 | 388 |
| MS.gene049372.t1 | MTR_3g072190 | 60.635 | 315 | 116 | 2 | 14 | 322 | 6 | 318 | 2.04e-134 | 384 |
| MS.gene049372.t1 | MTR_3g466180 | 61.250 | 320 | 122 | 1 | 3 | 322 | 6 | 323 | 3.76e-134 | 384 |
| MS.gene049372.t1 | MTR_4g083710 | 60.443 | 316 | 121 | 4 | 11 | 322 | 9 | 324 | 7.69e-133 | 381 |
| MS.gene049372.t1 | MTR_7g072480 | 57.325 | 314 | 132 | 1 | 9 | 322 | 5 | 316 | 4.02e-130 | 374 |
| MS.gene049372.t1 | MTR_5g074860 | 58.125 | 320 | 126 | 5 | 6 | 320 | 7 | 323 | 2.57e-127 | 367 |
| MS.gene049372.t1 | MTR_4g074995 | 58.805 | 318 | 115 | 4 | 8 | 322 | 4 | 308 | 4.01e-126 | 363 |
| MS.gene049372.t1 | MTR_1g115900 | 57.508 | 313 | 126 | 5 | 14 | 322 | 12 | 321 | 1.07e-124 | 360 |
| MS.gene049372.t1 | MTR_4g029170 | 58.923 | 297 | 118 | 3 | 28 | 322 | 27 | 321 | 1.22e-124 | 360 |
| MS.gene049372.t1 | MTR_4g074990 | 56.962 | 316 | 117 | 5 | 11 | 322 | 5 | 305 | 6.03e-122 | 352 |
| MS.gene049372.t1 | MTR_4g029200 | 54.209 | 297 | 134 | 1 | 26 | 322 | 44 | 338 | 5.89e-121 | 351 |
| MS.gene049372.t1 | MTR_7g026990 | 54.693 | 309 | 136 | 3 | 15 | 322 | 17 | 322 | 2.27e-119 | 347 |
| MS.gene049372.t1 | MTR_4g029180 | 57.143 | 294 | 122 | 3 | 31 | 322 | 30 | 321 | 3.28e-119 | 346 |
| MS.gene049372.t1 | MTR_4g029190 | 52.961 | 304 | 142 | 1 | 20 | 322 | 37 | 340 | 3.42e-118 | 344 |
| MS.gene049372.t1 | MTR_5g074710 | 54.348 | 322 | 138 | 6 | 7 | 322 | 3 | 321 | 3.67e-118 | 343 |
| MS.gene049372.t1 | MTR_5g074760 | 54.658 | 322 | 137 | 6 | 7 | 322 | 3 | 321 | 4.51e-118 | 343 |
| MS.gene049372.t1 | MTR_5g074740 | 55.312 | 320 | 131 | 6 | 12 | 322 | 5 | 321 | 1.27e-117 | 342 |
| MS.gene049372.t1 | MTR_7g093370 | 52.923 | 325 | 141 | 5 | 8 | 322 | 49 | 371 | 3.72e-116 | 340 |
| MS.gene049372.t1 | MTR_3g467600 | 51.250 | 320 | 149 | 4 | 8 | 322 | 7 | 324 | 1.90e-112 | 329 |
| MS.gene049372.t1 | MTR_1g054205 | 52.000 | 325 | 141 | 6 | 10 | 322 | 5 | 326 | 1.49e-110 | 324 |
| MS.gene049372.t1 | MTR_5g021060 | 51.815 | 303 | 136 | 3 | 28 | 322 | 30 | 330 | 1.74e-110 | 324 |
| MS.gene049372.t1 | MTR_4g074980 | 53.968 | 315 | 116 | 5 | 11 | 322 | 6 | 294 | 6.26e-109 | 319 |
| MS.gene049372.t1 | MTR_3g072190 | 61.508 | 252 | 95 | 1 | 71 | 322 | 2 | 251 | 1.10e-108 | 317 |
| MS.gene049372.t1 | MTR_8g076820 | 51.125 | 311 | 142 | 3 | 17 | 319 | 19 | 327 | 3.62e-107 | 316 |
| MS.gene049372.t1 | MTR_4g125940 | 50.915 | 328 | 143 | 6 | 6 | 322 | 9 | 329 | 1.14e-106 | 315 |
| MS.gene049372.t1 | MTR_5g017850 | 50.470 | 319 | 146 | 4 | 11 | 322 | 13 | 326 | 3.84e-106 | 313 |
| MS.gene049372.t1 | MTR_5g017860 | 48.476 | 328 | 158 | 4 | 4 | 322 | 1 | 326 | 1.45e-104 | 309 |
| MS.gene049372.t1 | MTR_4g122640 | 50.831 | 301 | 140 | 3 | 28 | 322 | 38 | 336 | 2.38e-103 | 306 |
| MS.gene049372.t1 | MTR_2g040000 | 52.273 | 308 | 131 | 5 | 27 | 322 | 28 | 331 | 3.07e-102 | 303 |
| MS.gene049372.t1 | MTR_4g074980 | 59.677 | 248 | 96 | 3 | 11 | 254 | 6 | 253 | 1.04e-101 | 299 |
| MS.gene049372.t1 | MTR_5g014100 | 50.654 | 306 | 134 | 4 | 28 | 319 | 26 | 328 | 2.89e-101 | 301 |
| MS.gene049372.t1 | MTR_2g029815 | 47.256 | 328 | 158 | 4 | 4 | 318 | 1 | 326 | 5.84e-100 | 298 |
| MS.gene049372.t1 | MTR_1g022970 | 49.013 | 304 | 144 | 3 | 28 | 322 | 46 | 347 | 6.25e-100 | 298 |
| MS.gene049372.t1 | MTR_2g029800 | 47.561 | 328 | 157 | 4 | 4 | 318 | 1 | 326 | 1.24e-99 | 297 |
| MS.gene049372.t1 | MTR_2g029820 | 46.646 | 328 | 160 | 4 | 4 | 318 | 1 | 326 | 5.02e-99 | 296 |
| MS.gene049372.t1 | MTR_2g029750 | 47.866 | 328 | 156 | 5 | 4 | 318 | 1 | 326 | 1.94e-97 | 292 |
| MS.gene049372.t1 | MTR_5g074860 | 49.688 | 320 | 114 | 7 | 6 | 320 | 7 | 284 | 3.86e-97 | 288 |
| MS.gene049372.t1 | MTR_2g029560 | 48.220 | 309 | 149 | 4 | 19 | 318 | 15 | 321 | 4.09e-97 | 291 |
| MS.gene049372.t1 | MTR_2g029860 | 48.148 | 324 | 155 | 4 | 10 | 322 | 9 | 330 | 5.46e-95 | 285 |
| MS.gene049372.t1 | MTR_2g029830 | 48.197 | 305 | 147 | 3 | 23 | 318 | 23 | 325 | 6.99e-95 | 285 |
| MS.gene049372.t1 | MTR_4g125940 | 54.152 | 277 | 112 | 5 | 57 | 322 | 2 | 274 | 1.12e-94 | 282 |
| MS.gene049372.t1 | MTR_2g028980 | 48.903 | 319 | 151 | 5 | 9 | 318 | 11 | 326 | 1.88e-94 | 284 |
| MS.gene049372.t1 | MTR_2g029740 | 46.037 | 328 | 162 | 5 | 4 | 318 | 1 | 326 | 5.51e-94 | 283 |
| MS.gene049372.t1 | MTR_2g029910 | 45.062 | 324 | 164 | 4 | 8 | 318 | 6 | 328 | 7.81e-93 | 280 |
| MS.gene049372.t1 | MTR_2g029730 | 47.573 | 309 | 151 | 3 | 19 | 318 | 16 | 322 | 2.29e-92 | 278 |
| MS.gene049372.t1 | MTR_4g030890 | 45.307 | 309 | 157 | 4 | 21 | 322 | 93 | 396 | 6.29e-92 | 280 |
| MS.gene049372.t1 | MTR_4g031140 | 44.136 | 324 | 165 | 5 | 10 | 322 | 6 | 324 | 1.45e-91 | 276 |
| MS.gene049372.t1 | MTR_5g049280 | 43.408 | 311 | 164 | 5 | 23 | 322 | 28 | 337 | 4.98e-91 | 275 |
| MS.gene049372.t1 | MTR_2g029850 | 45.427 | 328 | 164 | 4 | 4 | 318 | 1 | 326 | 1.34e-89 | 272 |
| MS.gene049372.t1 | MTR_0155s0040 | 42.902 | 317 | 173 | 5 | 7 | 322 | 6 | 315 | 6.20e-88 | 266 |
| MS.gene049372.t1 | MTR_1g077000 | 41.515 | 330 | 177 | 6 | 2 | 322 | 5 | 327 | 9.35e-87 | 264 |
| MS.gene049372.t1 | MTR_3g092990 | 40.979 | 327 | 184 | 3 | 4 | 322 | 1 | 326 | 2.83e-86 | 262 |
| MS.gene049372.t1 | MTR_7g029030 | 42.947 | 319 | 175 | 4 | 8 | 322 | 5 | 320 | 3.47e-86 | 262 |
| MS.gene049372.t1 | MTR_4g046713 | 41.587 | 315 | 173 | 4 | 12 | 318 | 11 | 322 | 7.09e-84 | 256 |
| MS.gene049372.t1 | MTR_4g114210 | 43.425 | 327 | 163 | 8 | 11 | 322 | 1 | 320 | 1.97e-81 | 250 |
| MS.gene049372.t1 | MTR_2g088770 | 42.089 | 316 | 170 | 6 | 12 | 318 | 10 | 321 | 5.83e-81 | 249 |
| MS.gene049372.t1 | MTR_5g022870 | 41.538 | 325 | 166 | 8 | 9 | 322 | 5 | 316 | 3.00e-79 | 244 |
| MS.gene049372.t1 | MTR_1g025980 | 41.693 | 319 | 172 | 6 | 7 | 318 | 3 | 314 | 5.43e-79 | 243 |
| MS.gene049372.t1 | MTR_1g101830 | 41.379 | 319 | 168 | 8 | 15 | 322 | 12 | 322 | 5.44e-79 | 244 |
| MS.gene049372.t1 | MTR_7g086820 | 41.077 | 297 | 171 | 3 | 24 | 319 | 16 | 309 | 5.98e-78 | 241 |
| MS.gene049372.t1 | MTR_6g027440 | 39.683 | 315 | 183 | 5 | 11 | 322 | 4 | 314 | 2.36e-76 | 237 |
| MS.gene049372.t1 | MTR_2g029830 | 48.031 | 254 | 121 | 3 | 74 | 318 | 6 | 257 | 4.06e-76 | 235 |
| MS.gene049372.t1 | MTR_3g092990 | 39.198 | 324 | 177 | 4 | 4 | 319 | 1 | 312 | 1.90e-75 | 234 |
| MS.gene049372.t1 | MTR_8g075100 | 41.776 | 304 | 158 | 7 | 28 | 322 | 26 | 319 | 3.17e-75 | 234 |
| MS.gene049372.t1 | MTR_2g008710 | 39.692 | 325 | 173 | 7 | 10 | 318 | 4 | 321 | 3.64e-74 | 231 |
| MS.gene049372.t1 | MTR_7g107520 | 39.936 | 313 | 175 | 5 | 13 | 318 | 10 | 316 | 2.17e-73 | 229 |
| MS.gene049372.t1 | MTR_1g009750 | 38.871 | 319 | 180 | 6 | 11 | 318 | 10 | 324 | 2.37e-72 | 227 |
| MS.gene049372.t1 | MTR_5g016010 | 38.369 | 331 | 185 | 7 | 1 | 318 | 1 | 325 | 7.20e-72 | 226 |
| MS.gene049372.t1 | MTR_1g086320 | 37.888 | 322 | 188 | 3 | 9 | 318 | 8 | 329 | 1.19e-71 | 225 |
| MS.gene049372.t1 | MTR_2g437770 | 40.803 | 299 | 158 | 6 | 28 | 318 | 50 | 337 | 2.04e-71 | 225 |
| MS.gene049372.t1 | MTR_1g038680 | 41.077 | 297 | 164 | 4 | 32 | 318 | 33 | 328 | 5.54e-71 | 223 |
| MS.gene049372.t1 | MTR_6g043460 | 37.725 | 334 | 190 | 6 | 1 | 322 | 1 | 328 | 1.56e-70 | 223 |
| MS.gene049372.t1 | MTR_4g127670 | 40.909 | 308 | 163 | 7 | 27 | 322 | 23 | 323 | 7.36e-70 | 220 |
| MS.gene049372.t1 | MTR_6g043280 | 38.509 | 322 | 179 | 7 | 9 | 318 | 14 | 328 | 1.00e-69 | 220 |
| MS.gene049372.t1 | MTR_7g086870 | 37.543 | 293 | 176 | 4 | 28 | 319 | 22 | 308 | 7.49e-69 | 217 |
| MS.gene049372.t1 | MTR_2g067440 | 36.556 | 331 | 167 | 7 | 28 | 320 | 60 | 385 | 9.16e-69 | 219 |
| MS.gene049372.t1 | MTR_4g087965 | 39.604 | 303 | 171 | 5 | 27 | 318 | 41 | 342 | 1.01e-68 | 218 |
| MS.gene049372.t1 | MTR_4g095450 | 38.889 | 324 | 188 | 6 | 1 | 318 | 1 | 320 | 2.89e-68 | 216 |
| MS.gene049372.t1 | MTR_4g133800 | 38.926 | 298 | 164 | 5 | 29 | 318 | 42 | 329 | 3.48e-68 | 216 |
| MS.gene049372.t1 | MTR_2g077990 | 36.667 | 330 | 171 | 6 | 28 | 320 | 76 | 404 | 4.31e-68 | 218 |
| MS.gene049372.t1 | MTR_3g072210 | 57.754 | 187 | 75 | 3 | 138 | 322 | 54 | 238 | 9.01e-68 | 212 |
| MS.gene049372.t1 | MTR_5g074700 | 51.111 | 225 | 92 | 6 | 101 | 322 | 5 | 214 | 2.23e-67 | 210 |
| MS.gene049372.t1 | MTR_1g086490 | 37.273 | 330 | 186 | 5 | 9 | 318 | 8 | 336 | 3.74e-67 | 214 |
| MS.gene049372.t1 | MTR_1g090760 | 36.335 | 322 | 189 | 7 | 15 | 322 | 11 | 330 | 1.05e-66 | 213 |
| MS.gene049372.t1 | MTR_2g008160 | 39.677 | 310 | 168 | 8 | 21 | 318 | 17 | 319 | 1.81e-66 | 211 |
| MS.gene049372.t1 | MTR_4g132490 | 34.154 | 325 | 208 | 2 | 3 | 322 | 4 | 327 | 6.88e-66 | 210 |
| MS.gene049372.t1 | MTR_2g078610 | 35.736 | 333 | 170 | 8 | 28 | 320 | 76 | 404 | 1.32e-65 | 212 |
| MS.gene049372.t1 | MTR_2g099175 | 37.338 | 308 | 174 | 6 | 27 | 322 | 35 | 335 | 2.27e-65 | 209 |
| MS.gene049372.t1 | MTR_1g066710 | 35.880 | 301 | 187 | 4 | 26 | 322 | 25 | 323 | 3.28e-64 | 206 |
| MS.gene049372.t1 | MTR_1g066380 | 35.216 | 301 | 189 | 4 | 26 | 322 | 25 | 323 | 2.06e-62 | 201 |
| MS.gene049372.t1 | MTR_0286s0010 | 35.494 | 324 | 188 | 6 | 14 | 322 | 17 | 334 | 4.17e-62 | 201 |
| MS.gene049372.t1 | MTR_6g008075 | 35.494 | 324 | 188 | 6 | 14 | 322 | 17 | 334 | 4.17e-62 | 201 |
| MS.gene049372.t1 | MTR_2g078280 | 35.849 | 318 | 166 | 6 | 28 | 308 | 76 | 392 | 4.29e-62 | 202 |
| MS.gene049372.t1 | MTR_8g062780 | 35.423 | 319 | 191 | 6 | 9 | 318 | 8 | 320 | 6.99e-62 | 200 |
| MS.gene049372.t1 | MTR_1g066640 | 35.548 | 301 | 188 | 4 | 26 | 322 | 25 | 323 | 1.77e-61 | 199 |
| MS.gene049372.t1 | MTR_1g009750 | 35.962 | 317 | 175 | 7 | 11 | 318 | 10 | 307 | 5.62e-61 | 197 |
| MS.gene049372.t1 | MTR_2g008730 | 36.615 | 325 | 159 | 7 | 10 | 318 | 4 | 297 | 1.11e-60 | 196 |
| MS.gene049372.t1 | MTR_1g066680 | 34.343 | 297 | 190 | 4 | 26 | 319 | 25 | 319 | 6.73e-60 | 194 |
| MS.gene049372.t1 | MTR_6g043240 | 35.312 | 320 | 187 | 8 | 11 | 318 | 16 | 327 | 1.03e-59 | 195 |
| MS.gene049372.t1 | MTR_7g072490 | 44.628 | 242 | 78 | 2 | 74 | 315 | 2 | 187 | 1.23e-59 | 190 |
| MS.gene049372.t1 | MTR_3g105790 | 35.780 | 327 | 189 | 5 | 10 | 322 | 3 | 322 | 4.00e-59 | 192 |
| MS.gene049372.t1 | MTR_4g132110 | 32.573 | 307 | 203 | 3 | 15 | 318 | 19 | 324 | 2.53e-58 | 191 |
| MS.gene049372.t1 | MTR_4g132110 | 32.051 | 312 | 203 | 4 | 15 | 318 | 19 | 329 | 5.38e-56 | 185 |
| MS.gene049372.t1 | MTR_0147s0010 | 32.710 | 321 | 177 | 5 | 25 | 320 | 74 | 380 | 3.13e-55 | 184 |
| MS.gene049372.t1 | MTR_5g033470 | 36.102 | 313 | 186 | 5 | 22 | 322 | 67 | 377 | 4.93e-55 | 184 |
| MS.gene049372.t1 | MTR_2g008160 | 36.842 | 304 | 150 | 8 | 21 | 318 | 17 | 284 | 9.30e-55 | 180 |
| MS.gene049372.t1 | MTR_2g067450 | 35.526 | 304 | 179 | 7 | 28 | 320 | 11 | 308 | 8.60e-51 | 171 |
| MS.gene049372.t1 | MTR_1g066380 | 34.510 | 255 | 161 | 4 | 72 | 322 | 3 | 255 | 6.75e-48 | 161 |
| MS.gene049372.t1 | MTR_3g072260 | 62.500 | 128 | 42 | 2 | 14 | 135 | 6 | 133 | 4.63e-47 | 155 |
| MS.gene049372.t1 | MTR_2g008160 | 44.068 | 177 | 95 | 3 | 21 | 197 | 17 | 189 | 6.68e-44 | 149 |
| MS.gene049372.t1 | MTR_3g105790 | 36.777 | 242 | 140 | 3 | 91 | 322 | 8 | 246 | 1.05e-40 | 142 |
| MS.gene049372.t1 | MTR_2g029880 | 41.489 | 188 | 89 | 4 | 140 | 318 | 9 | 184 | 1.21e-38 | 136 |
| MS.gene049372.t1 | MTR_2g077980 | 28.070 | 285 | 158 | 8 | 80 | 320 | 1 | 282 | 1.87e-28 | 111 |
| MS.gene049372.t1 | MTR_5g074770 | 49.485 | 97 | 46 | 2 | 226 | 320 | 12 | 107 | 3.42e-27 | 103 |
| MS.gene049372.t1 | MTR_2g078560 | 29.279 | 222 | 121 | 4 | 133 | 318 | 95 | 316 | 7.64e-27 | 108 |
| MS.gene049372.t1 | MTR_7g086790 | 44.167 | 120 | 63 | 3 | 75 | 194 | 17 | 132 | 1.60e-24 | 98.6 |
| MS.gene049372.t1 | MTR_3g462850 | 36.620 | 142 | 78 | 5 | 192 | 322 | 9 | 149 | 2.80e-23 | 94.0 |
| MS.gene049372.t1 | MTR_5g058120 | 35.000 | 160 | 94 | 3 | 164 | 321 | 7 | 158 | 3.02e-23 | 96.7 |
| MS.gene049372.t1 | MTR_4g114220 | 40.580 | 138 | 58 | 4 | 40 | 169 | 15 | 136 | 9.18e-23 | 92.4 |
| MS.gene049372.t1 | MTR_4g031040 | 36.257 | 171 | 70 | 4 | 89 | 259 | 3 | 134 | 2.32e-22 | 91.3 |
| MS.gene049372.t1 | MTR_1g089005 | 40.909 | 132 | 71 | 2 | 14 | 139 | 1 | 131 | 1.27e-21 | 89.7 |
| MS.gene049372.t1 | MTR_6g048160 | 54.167 | 72 | 29 | 2 | 67 | 138 | 22 | 89 | 1.02e-18 | 80.1 |
| MS.gene049372.t1 | MTR_3g107060 | 27.237 | 257 | 120 | 9 | 60 | 301 | 106 | 310 | 4.26e-18 | 83.6 |
| MS.gene049372.t1 | MTR_1g098320 | 43.421 | 76 | 43 | 0 | 243 | 318 | 45 | 120 | 2.05e-17 | 78.2 |
| MS.gene049372.t1 | MTR_7g086810 | 31.967 | 122 | 57 | 1 | 24 | 145 | 2 | 97 | 4.00e-15 | 73.9 |
| MS.gene049372.t1 | MTR_2g029930 | 35.345 | 116 | 43 | 4 | 14 | 111 | 1 | 102 | 4.26e-15 | 70.5 |
| MS.gene049372.t1 | MTR_7g107500 | 41.250 | 80 | 46 | 1 | 239 | 318 | 15 | 93 | 1.73e-13 | 65.9 |
| MS.gene049372.t1 | MTR_7g086785 | 29.787 | 141 | 93 | 2 | 74 | 214 | 4 | 138 | 1.96e-13 | 67.0 |
| MS.gene049372.t1 | MTR_4g012865 | 39.437 | 71 | 43 | 0 | 25 | 95 | 74 | 144 | 7.81e-13 | 65.5 |
| MS.gene049372.t1 | MTR_0147s0040 | 37.662 | 77 | 48 | 0 | 244 | 320 | 5 | 81 | 1.96e-12 | 62.4 |
| MS.gene049372.t1 | MTR_3g086710 | 54.348 | 46 | 21 | 0 | 28 | 73 | 19 | 64 | 6.80e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049372.t1 | AT5G05340 | 76.768 | 297 | 69 | 0 | 26 | 322 | 28 | 324 | 6.89e-172 | 479 |
| MS.gene049372.t1 | AT5G58400 | 63.987 | 311 | 110 | 2 | 14 | 322 | 15 | 325 | 4.30e-147 | 417 |
| MS.gene049372.t1 | AT5G58390 | 59.365 | 315 | 127 | 1 | 9 | 322 | 2 | 316 | 1.04e-136 | 390 |
| MS.gene049372.t1 | AT1G14550 | 55.911 | 313 | 130 | 5 | 9 | 318 | 10 | 317 | 5.66e-122 | 353 |
| MS.gene049372.t1 | AT5G06720 | 53.211 | 327 | 141 | 4 | 6 | 322 | 9 | 333 | 5.95e-120 | 348 |
| MS.gene049372.t1 | AT1G14540 | 53.698 | 311 | 140 | 3 | 14 | 322 | 7 | 315 | 5.95e-118 | 343 |
| MS.gene049372.t1 | AT5G06730 | 51.220 | 328 | 146 | 5 | 6 | 322 | 10 | 334 | 1.06e-114 | 336 |
| MS.gene049372.t1 | AT4G36430 | 50.470 | 319 | 148 | 3 | 12 | 322 | 14 | 330 | 1.12e-112 | 330 |
| MS.gene049372.t1 | AT2G18150 | 50.162 | 309 | 144 | 3 | 22 | 322 | 30 | 336 | 1.13e-109 | 322 |
| MS.gene049372.t1 | AT2G18140 | 50.000 | 310 | 145 | 3 | 21 | 322 | 28 | 335 | 8.11e-109 | 320 |
| MS.gene049372.t1 | AT3G50990 | 50.606 | 330 | 145 | 5 | 9 | 322 | 14 | 341 | 1.06e-107 | 318 |
| MS.gene049372.t1 | AT5G66390 | 50.825 | 303 | 139 | 3 | 28 | 322 | 33 | 333 | 1.35e-107 | 317 |
| MS.gene049372.t1 | AT1G44970 | 51.780 | 309 | 138 | 3 | 20 | 319 | 37 | 343 | 1.01e-105 | 313 |
| MS.gene049372.t1 | AT1G49570 | 50.165 | 303 | 141 | 3 | 28 | 321 | 48 | 349 | 1.11e-101 | 303 |
| MS.gene049372.t1 | AT5G19890 | 48.765 | 324 | 147 | 6 | 10 | 322 | 12 | 327 | 3.03e-99 | 295 |
| MS.gene049372.t1 | AT2G35380 | 46.154 | 325 | 157 | 4 | 14 | 322 | 13 | 335 | 1.62e-97 | 291 |
| MS.gene049372.t1 | AT4G16270 | 49.180 | 305 | 139 | 5 | 28 | 322 | 50 | 348 | 4.46e-97 | 291 |
| MS.gene049372.t1 | AT4G08770 | 47.923 | 313 | 150 | 4 | 21 | 322 | 17 | 327 | 1.24e-96 | 290 |
| MS.gene049372.t1 | AT5G19880 | 47.077 | 325 | 156 | 6 | 12 | 322 | 7 | 329 | 5.75e-96 | 287 |
| MS.gene049372.t1 | AT4G08780 | 46.774 | 310 | 152 | 4 | 24 | 322 | 20 | 327 | 2.69e-95 | 286 |
| MS.gene049372.t1 | AT1G68850 | 42.763 | 304 | 161 | 4 | 28 | 319 | 30 | 332 | 4.06e-94 | 283 |
| MS.gene049372.t1 | AT3G32980 | 45.679 | 324 | 163 | 4 | 10 | 322 | 13 | 334 | 1.37e-93 | 282 |
| MS.gene049372.t1 | AT2G38390 | 44.713 | 331 | 171 | 5 | 2 | 322 | 5 | 333 | 2.21e-93 | 281 |
| MS.gene049372.t1 | AT2G38380 | 44.848 | 330 | 170 | 5 | 3 | 322 | 6 | 333 | 2.60e-92 | 278 |
| MS.gene049372.t1 | AT2G22420 | 43.653 | 323 | 170 | 4 | 7 | 322 | 2 | 319 | 2.16e-91 | 276 |
| MS.gene049372.t1 | AT3G49110 | 44.892 | 323 | 165 | 4 | 11 | 322 | 16 | 336 | 6.15e-91 | 275 |
| MS.gene049372.t1 | AT3G49120 | 45.511 | 323 | 163 | 4 | 11 | 322 | 15 | 335 | 8.26e-91 | 275 |
| MS.gene049372.t1 | AT3G01190 | 41.846 | 325 | 173 | 7 | 7 | 322 | 4 | 321 | 2.01e-84 | 258 |
| MS.gene049372.t1 | AT5G15180 | 39.645 | 338 | 179 | 8 | 1 | 322 | 1 | 329 | 6.27e-81 | 249 |
| MS.gene049372.t1 | AT2G41480 | 41.641 | 329 | 171 | 9 | 8 | 322 | 7 | 328 | 9.13e-80 | 246 |
| MS.gene049372.t1 | AT5G42180 | 41.250 | 320 | 169 | 7 | 11 | 320 | 5 | 315 | 3.42e-79 | 244 |
| MS.gene049372.t1 | AT4G33420 | 41.379 | 319 | 176 | 8 | 8 | 322 | 14 | 325 | 9.23e-79 | 243 |
| MS.gene049372.t1 | AT1G05260 | 40.060 | 332 | 179 | 8 | 4 | 322 | 1 | 325 | 1.52e-78 | 243 |
| MS.gene049372.t1 | AT5G17820 | 40.063 | 317 | 171 | 5 | 13 | 322 | 9 | 313 | 1.55e-78 | 242 |
| MS.gene049372.t1 | AT4G33420 | 41.379 | 319 | 176 | 8 | 8 | 322 | 61 | 372 | 3.19e-78 | 243 |
| MS.gene049372.t1 | AT1G05240 | 40.328 | 305 | 167 | 5 | 28 | 322 | 26 | 325 | 3.54e-78 | 242 |
| MS.gene049372.t1 | AT1G05250 | 40.328 | 305 | 167 | 5 | 28 | 322 | 26 | 325 | 3.54e-78 | 242 |
| MS.gene049372.t1 | AT5G17820 | 40.063 | 317 | 171 | 5 | 13 | 322 | 62 | 366 | 1.23e-77 | 242 |
| MS.gene049372.t1 | AT5G64120 | 42.282 | 298 | 157 | 6 | 32 | 322 | 39 | 328 | 4.67e-77 | 239 |
| MS.gene049372.t1 | AT5G14130 | 39.062 | 320 | 178 | 6 | 9 | 318 | 14 | 326 | 8.62e-77 | 238 |
| MS.gene049372.t1 | AT5G51890 | 39.252 | 321 | 182 | 6 | 7 | 319 | 4 | 319 | 1.72e-76 | 237 |
| MS.gene049372.t1 | AT5G14130 | 38.750 | 320 | 179 | 6 | 9 | 318 | 55 | 367 | 2.00e-76 | 239 |
| MS.gene049372.t1 | AT3G03670 | 40.439 | 319 | 174 | 4 | 14 | 322 | 9 | 321 | 2.29e-75 | 234 |
| MS.gene049372.t1 | AT4G11290 | 39.385 | 325 | 180 | 8 | 7 | 318 | 2 | 322 | 3.27e-74 | 231 |
| MS.gene049372.t1 | AT2G35380 | 47.967 | 246 | 113 | 3 | 90 | 322 | 4 | 247 | 9.25e-73 | 225 |
| MS.gene049372.t1 | AT3G21770 | 38.907 | 311 | 171 | 7 | 20 | 318 | 21 | 324 | 3.27e-72 | 226 |
| MS.gene049372.t1 | AT5G40150 | 40.000 | 300 | 174 | 4 | 23 | 318 | 27 | 324 | 6.63e-72 | 226 |
| MS.gene049372.t1 | AT1G77100 | 42.462 | 325 | 168 | 10 | 11 | 322 | 1 | 319 | 6.79e-72 | 225 |
| MS.gene049372.t1 | AT4G26010 | 40.065 | 307 | 175 | 5 | 14 | 319 | 8 | 306 | 7.10e-72 | 225 |
| MS.gene049372.t1 | AT1G71695 | 40.468 | 299 | 171 | 5 | 28 | 322 | 44 | 339 | 7.13e-72 | 226 |
| MS.gene049372.t1 | AT4G26010 | 40.065 | 307 | 175 | 5 | 14 | 319 | 36 | 334 | 1.54e-71 | 225 |
| MS.gene049372.t1 | AT4G37530 | 39.936 | 313 | 166 | 6 | 21 | 318 | 20 | 325 | 3.93e-71 | 224 |
| MS.gene049372.t1 | AT4G33870 | 34.125 | 337 | 179 | 4 | 25 | 320 | 65 | 399 | 9.13e-71 | 225 |
| MS.gene049372.t1 | AT2G18980 | 37.994 | 329 | 185 | 7 | 5 | 322 | 3 | 323 | 2.04e-70 | 222 |
| MS.gene049372.t1 | AT4G37520 | 39.610 | 308 | 164 | 6 | 26 | 318 | 25 | 325 | 2.05e-70 | 222 |
| MS.gene049372.t1 | AT5G47000 | 37.500 | 328 | 193 | 5 | 1 | 318 | 1 | 326 | 8.29e-70 | 221 |
| MS.gene049372.t1 | AT4G30170 | 40.260 | 308 | 166 | 6 | 26 | 322 | 25 | 325 | 8.35e-70 | 220 |
| MS.gene049372.t1 | AT5G67400 | 37.920 | 327 | 185 | 6 | 7 | 318 | 2 | 325 | 1.23e-69 | 220 |
| MS.gene049372.t1 | AT3G49960 | 37.309 | 327 | 187 | 6 | 7 | 318 | 2 | 325 | 1.04e-68 | 218 |
| MS.gene049372.t1 | AT3G28200 | 37.458 | 299 | 182 | 4 | 23 | 318 | 16 | 312 | 1.86e-68 | 216 |
| MS.gene049372.t1 | AT4G37520 | 39.286 | 308 | 162 | 7 | 26 | 318 | 25 | 322 | 2.07e-68 | 217 |
| MS.gene049372.t1 | AT5G39580 | 39.628 | 323 | 174 | 9 | 9 | 322 | 9 | 319 | 3.20e-68 | 216 |
| MS.gene049372.t1 | AT4G17690 | 38.079 | 302 | 183 | 3 | 20 | 318 | 18 | 318 | 8.90e-68 | 215 |
| MS.gene049372.t1 | AT1G34510 | 37.742 | 310 | 184 | 6 | 14 | 322 | 8 | 309 | 2.04e-67 | 214 |
| MS.gene049372.t1 | AT1G30870 | 38.361 | 305 | 168 | 6 | 28 | 322 | 51 | 345 | 2.32e-67 | 215 |
| MS.gene049372.t1 | AT2G34060 | 41.042 | 307 | 167 | 7 | 25 | 319 | 39 | 343 | 2.35e-67 | 214 |
| MS.gene049372.t1 | AT4G31760 | 36.585 | 328 | 191 | 4 | 4 | 322 | 7 | 326 | 4.49e-67 | 213 |
| MS.gene049372.t1 | AT1G24110 | 35.737 | 319 | 193 | 5 | 14 | 322 | 6 | 322 | 7.08e-66 | 210 |
| MS.gene049372.t1 | AT4G25980 | 36.875 | 320 | 182 | 8 | 12 | 318 | 10 | 322 | 1.44e-65 | 209 |
| MS.gene049372.t1 | AT2G24800 | 38.065 | 310 | 170 | 4 | 26 | 322 | 29 | 329 | 1.05e-64 | 207 |
| MS.gene049372.t1 | AT2G39040 | 38.658 | 313 | 178 | 7 | 22 | 322 | 40 | 350 | 1.44e-63 | 205 |
| MS.gene049372.t1 | AT5G64100 | 36.061 | 330 | 179 | 7 | 11 | 318 | 8 | 327 | 1.51e-62 | 202 |
| MS.gene049372.t1 | AT5G64110 | 39.799 | 299 | 162 | 6 | 30 | 318 | 36 | 326 | 9.41e-61 | 197 |
| MS.gene049372.t1 | AT4G21960 | 33.887 | 301 | 195 | 3 | 21 | 318 | 24 | 323 | 1.00e-60 | 197 |
| MS.gene049372.t1 | AT4G37530 | 40.226 | 266 | 137 | 5 | 21 | 271 | 20 | 278 | 4.63e-60 | 194 |
| MS.gene049372.t1 | AT2G37130 | 33.550 | 307 | 199 | 4 | 20 | 322 | 22 | 327 | 9.34e-59 | 192 |
| MS.gene049372.t1 | AT2G37130 | 33.784 | 296 | 191 | 4 | 31 | 322 | 2 | 296 | 3.58e-57 | 187 |
| MS.gene049372.t1 | AT2G43480 | 33.962 | 318 | 188 | 7 | 19 | 322 | 26 | 335 | 1.51e-56 | 186 |
| MS.gene049372.t1 | AT5G24070 | 33.762 | 311 | 184 | 7 | 26 | 322 | 33 | 335 | 1.51e-55 | 184 |
| MS.gene049372.t1 | AT5G22410 | 35.045 | 331 | 191 | 12 | 3 | 319 | 2 | 322 | 1.03e-53 | 179 |
| MS.gene049372.t1 | AT3G17070 | 32.895 | 304 | 195 | 4 | 25 | 320 | 35 | 337 | 1.32e-52 | 176 |
| MS.gene049372.t1 | AT5G39580 | 37.931 | 232 | 132 | 5 | 9 | 240 | 9 | 228 | 1.42e-45 | 155 |
| MS.gene049372.t1 | AT4G25980 | 40.217 | 184 | 106 | 3 | 12 | 195 | 55 | 234 | 2.23e-41 | 145 |
| MS.gene049372.t1 | AT2G24800 | 43.452 | 168 | 91 | 1 | 26 | 193 | 29 | 192 | 1.00e-39 | 140 |
| MS.gene049372.t1 | AT3G17070 | 32.046 | 259 | 166 | 5 | 70 | 320 | 18 | 274 | 1.41e-38 | 138 |
| MS.gene049372.t1 | AT3G42570 | 37.634 | 93 | 57 | 1 | 104 | 195 | 57 | 149 | 1.69e-15 | 73.2 |
| MS.gene049372.t1 | AT4G35970 | 25.591 | 254 | 132 | 9 | 62 | 304 | 33 | 240 | 3.14e-14 | 72.0 |
| MS.gene049372.t1 | AT4G35970 | 26.496 | 234 | 115 | 9 | 62 | 284 | 33 | 220 | 1.84e-12 | 66.2 |
Find 82 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTATTTGTCCTCATAAT+AGG | 0.171617 | 3.1:+75558635 | MS.gene049372:CDS |
| CAAGAACATTGTTCAAAATA+AGG | 0.178424 | 3.1:+75559848 | MS.gene049372:CDS |
| TCCCCTGACCCTGCTGTGTT+TGG | 0.210920 | 3.1:-75559768 | None:intergenic |
| TTGAACAGTGGAAGAGAGTT+TGG | 0.279654 | 3.1:-75558705 | None:intergenic |
| GATGACACATCAAACTTTAC+TGG | 0.290470 | 3.1:+75559055 | MS.gene049372:CDS |
| ACATTGAGGTGAGTGTATTT+AGG | 0.309316 | 3.1:-75559465 | None:intergenic |
| CCACGAGCAGAGTTTCTATT+CGG | 0.318939 | 3.1:-75559094 | None:intergenic |
| CATTCGGGCCTCCTTTGATA+TGG | 0.331346 | 3.1:-75558744 | None:intergenic |
| TTCTATTTGTCCTCATAATA+GGG | 0.335750 | 3.1:+75558636 | MS.gene049372:CDS |
| CCCCTGACCCTGCTGTGTTT+GGG | 0.339534 | 3.1:-75559767 | None:intergenic |
| AGGACCGTTAACTCTTAGTT+AGG | 0.341398 | 3.1:-75560047 | None:intergenic |
| AAGAACATTGTTCAAAATAA+GGG | 0.351769 | 3.1:+75559849 | MS.gene049372:CDS |
| TAGATTAACCATGATCAGTT+TGG | 0.380143 | 3.1:+75558613 | MS.gene049372:CDS |
| TGACTAGGTGCGCACACAAT+TGG | 0.387097 | 3.1:+75559657 | MS.gene049372:intron |
| AGTGTATTTAGGTTTGAAGT+TGG | 0.403846 | 3.1:-75559454 | None:intergenic |
| AAGCAAGGTGCACAACCTTT+AGG | 0.406716 | 3.1:+75559682 | MS.gene049372:CDS |
| AAGGACTTGGTCACATTGTC+AGG | 0.407167 | 3.1:+75559511 | MS.gene049372:CDS |
| TGCCCAAACACAGCAGGGTC+AGG | 0.415043 | 3.1:+75559765 | MS.gene049372:CDS |
| CACGAGCAGAGTTTCTATTC+GGG | 0.419229 | 3.1:-75559093 | None:intergenic |
| GAGGATGGAAGCACCCATTC+GGG | 0.431374 | 3.1:-75558759 | None:intergenic |
| TGGTCTTTCTAGCAAGGACT+TGG | 0.435885 | 3.1:+75559498 | MS.gene049372:CDS |
| AGGGTCAGGGGACAACAATT+TGG | 0.441277 | 3.1:+75559779 | MS.gene049372:CDS |
| TGAACAGTGGAAGAGAGTTT+GGG | 0.444166 | 3.1:-75558704 | None:intergenic |
| CTTCTATTATAGGGATGTGA+TGG | 0.450919 | 3.1:+75559019 | MS.gene049372:intron |
| ACCTCAATGTTTAGTGCTGT+TGG | 0.451105 | 3.1:+75559478 | MS.gene049372:CDS |
| GGAGGATGGAAGCACCCATT+CGG | 0.458965 | 3.1:-75558760 | None:intergenic |
| TGCTGTTGGTCTTTCTAGCA+AGG | 0.464803 | 3.1:+75559492 | MS.gene049372:CDS |
| AGTACTGTAGCCACTCACTA+TGG | 0.474377 | 3.1:-75559919 | None:intergenic |
| CGCCACTGCTATGATAAAGA+TGG | 0.475391 | 3.1:+75559968 | MS.gene049372:CDS |
| CATTGGCACTCCCTATTATG+AGG | 0.477774 | 3.1:-75558646 | None:intergenic |
| CAGGATCAAATGGAGAGATC+AGG | 0.478815 | 3.1:+75560009 | MS.gene049372:CDS |
| TAATTTGCATGATAGCTTGG+TGG | 0.486043 | 3.1:+75559352 | MS.gene049372:intron |
| AAATAGAACCAAACTGATCA+TGG | 0.488287 | 3.1:-75558621 | None:intergenic |
| AGTCCTCTCACAGGATCAAA+TGG | 0.488459 | 3.1:+75559999 | MS.gene049372:CDS |
| GATAGCTTGGTGGCCCAACC+TGG | 0.492782 | 3.1:+75559362 | MS.gene049372:intron |
| GTTTGTAGAAAGTTGTGCAT+TGG | 0.497733 | 3.1:-75558663 | None:intergenic |
| AGCAATCGTGGAAGAACAAT+CGG | 0.497821 | 3.1:-75558781 | None:intergenic |
| TCAAATTGCCCAAACACAGC+AGG | 0.504823 | 3.1:+75559759 | MS.gene049372:CDS |
| AGCAGATTGACTAGCCGTCT+TGG | 0.506189 | 3.1:-75559410 | None:intergenic |
| AACGGAGTCTGCGGCAGCGA+TGG | 0.508742 | 3.1:-75559194 | None:intergenic |
| GTTGTAGATTCGTGTCCTAA+AGG | 0.511429 | 3.1:-75559697 | None:intergenic |
| AGCAAATGAAGTATCTATGT+TGG | 0.515266 | 3.1:-75559724 | None:intergenic |
| TTTAGGTTTGAAGTTGGTGC+CGG | 0.515530 | 3.1:-75559448 | None:intergenic |
| TGCTGCTAACACCGCGATCC+CGG | 0.519447 | 3.1:+75559429 | MS.gene049372:CDS |
| CCAACCTGGAACGTAAAACT+TGG | 0.525815 | 3.1:+75559376 | MS.gene049372:CDS |
| GCCACTCACTATGGAGTTGG+TGG | 0.526661 | 3.1:-75559910 | None:intergenic |
| CATATCAAAGGAGGCCCGAA+TGG | 0.534630 | 3.1:+75558745 | MS.gene049372:CDS |
| GTAGTTGTTGTCAAAAGAAG+TGG | 0.535285 | 3.1:-75559823 | None:intergenic |
| ATATCAAAGGAGGCCCGAAT+GGG | 0.545501 | 3.1:+75558746 | MS.gene049372:CDS |
| TCAGCACATGATACAACGCC+AGG | 0.549232 | 3.1:-75559163 | None:intergenic |
| TGAAGTTGGTGCCGGGATCG+CGG | 0.550314 | 3.1:-75559440 | None:intergenic |
| GCCGTAGAGAATGTATGTCC+TGG | 0.552010 | 3.1:+75559145 | MS.gene049372:CDS |
| TCGGGCCTCCTTTGATATGG+CGG | 0.556957 | 3.1:-75558741 | None:intergenic |
| TTAGGTTTGAAGTTGGTGCC+GGG | 0.562545 | 3.1:-75559447 | None:intergenic |
| GCCCAAACACAGCAGGGTCA+GGG | 0.564568 | 3.1:+75559766 | MS.gene049372:CDS |
| AGTCTGCGGCAGCGATGGCA+AGG | 0.565639 | 3.1:-75559189 | None:intergenic |
| GCCACTGCTATGATAAAGAT+GGG | 0.570911 | 3.1:+75559969 | MS.gene049372:CDS |
| TTCTATTATAGGGATGTGAT+GGG | 0.571599 | 3.1:+75559020 | MS.gene049372:intron |
| CCGAATAGAAACTCTGCTCG+TGG | 0.583680 | 3.1:+75559094 | MS.gene049372:CDS |
| GTGGGAGTCTGAAGATCAAG+AGG | 0.583868 | 3.1:-75559804 | None:intergenic |
| TAGTTGTTGTCAAAAGAAGT+GGG | 0.588511 | 3.1:-75559822 | None:intergenic |
| GCCAGGACATACATTCTCTA+CGG | 0.589807 | 3.1:-75559146 | None:intergenic |
| AGTGCAATCCGCCATATCAA+AGG | 0.595791 | 3.1:+75558733 | MS.gene049372:CDS |
| GACTACACTTACAATTGCAA+CGG | 0.601677 | 3.1:-75559212 | None:intergenic |
| GGTGATATTAGTCCTCTCAC+AGG | 0.606148 | 3.1:+75559990 | MS.gene049372:CDS |
| GTGGAAGAACAATCGGAGGA+TGG | 0.613042 | 3.1:-75558774 | None:intergenic |
| GTAGCCACTCACTATGGAGT+TGG | 0.614655 | 3.1:-75559913 | None:intergenic |
| ACCCATCTTTATCATAGCAG+TGG | 0.616128 | 3.1:-75559970 | None:intergenic |
| CATAGCAGTGGCGAAATCTG+AGG | 0.616746 | 3.1:-75559958 | None:intergenic |
| TCTCCATTTGATCCTGTGAG+AGG | 0.617319 | 3.1:-75560002 | None:intergenic |
| TACAATTGCAACGGAGTCTG+CGG | 0.621872 | 3.1:-75559203 | None:intergenic |
| CAAATTGCCCAAACACAGCA+GGG | 0.622167 | 3.1:+75559760 | MS.gene049372:CDS |
| CGCACACAATTGGACAAGCA+AGG | 0.634921 | 3.1:+75559667 | MS.gene049372:CDS |
| ACCAACAGCACTAAACATTG+AGG | 0.638042 | 3.1:-75559479 | None:intergenic |
| CCCAAACACAGCAGGGTCAG+GGG | 0.648779 | 3.1:+75559767 | MS.gene049372:CDS |
| GCAATCCGCCATATCAAAGG+AGG | 0.649668 | 3.1:+75558736 | MS.gene049372:CDS |
| TCCACCAACTCCATAGTGAG+TGG | 0.659928 | 3.1:+75559909 | MS.gene049372:CDS |
| TTACATTGACAAAGCAATCG+TGG | 0.667907 | 3.1:-75558793 | None:intergenic |
| TGGAAGAAGAGACGCCAAGA+CGG | 0.677274 | 3.1:+75559396 | MS.gene049372:CDS |
| AATCGTGGAAGAACAATCGG+AGG | 0.712838 | 3.1:-75558778 | None:intergenic |
| TGATATGGCGGATTGCACTG+TGG | 0.716699 | 3.1:-75558729 | None:intergenic |
| TTGCACTGTGGATTGAACAG+TGG | 0.752833 | 3.1:-75558717 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATAATTTCTCATTT+GGG | + | chr3.1:75559589-75559608 | MS.gene049372:intron | 10.0% |
| !! | CAAATATATAATTTCTCATT+TGG | + | chr3.1:75559588-75559607 | MS.gene049372:intron | 15.0% |
| !!! | AATATGTTACTTCTATTATA+GGG | + | chr3.1:75559010-75559029 | MS.gene049372:intron | 15.0% |
| !!! | TAATATGTTACTTCTATTAT+AGG | + | chr3.1:75559009-75559028 | MS.gene049372:intron | 15.0% |
| !! | AAATATAAGTAAAACAGCAT+AGG | - | chr3.1:75559564-75559583 | None:intergenic | 20.0% |
| !! | AAGAACATTGTTCAAAATAA+GGG | + | chr3.1:75559849-75559868 | MS.gene049372:CDS | 20.0% |
| ! | AAACATCAATAAAGAAAGTG+TGG | - | chr3.1:75558872-75558891 | None:intergenic | 25.0% |
| ! | CAAGAACATTGTTCAAAATA+AGG | + | chr3.1:75559848-75559867 | MS.gene049372:CDS | 25.0% |
| ! | GGTATCTTAATTAATTGACT+AGG | + | chr3.1:75559642-75559661 | MS.gene049372:intron | 25.0% |
| ! | TTCTATTTGTCCTCATAATA+GGG | + | chr3.1:75558636-75558655 | MS.gene049372:CDS | 25.0% |
| !!! | TTTTAATTTGCATGATAGCT+TGG | + | chr3.1:75559349-75559368 | MS.gene049372:intron | 25.0% |
| AAATAGAACCAAACTGATCA+TGG | - | chr3.1:75558624-75558643 | None:intergenic | 30.0% | |
| ATTAACTCATTGTGCTAATG+AGG | - | chr3.1:75558984-75559003 | None:intergenic | 30.0% | |
| GTTCTATTTGTCCTCATAAT+AGG | + | chr3.1:75558635-75558654 | MS.gene049372:CDS | 30.0% | |
| TAGATTAACCATGATCAGTT+TGG | + | chr3.1:75558613-75558632 | MS.gene049372:CDS | 30.0% | |
| TAGTTGTTGTCAAAAGAAGT+GGG | - | chr3.1:75559825-75559844 | None:intergenic | 30.0% | |
| TTCTATTATAGGGATGTGAT+GGG | + | chr3.1:75559020-75559039 | MS.gene049372:intron | 30.0% | |
| ! | AGCAAATGAAGTATCTATGT+TGG | - | chr3.1:75559727-75559746 | None:intergenic | 30.0% |
| ! | AGTGTATTTAGGTTTGAAGT+TGG | - | chr3.1:75559457-75559476 | None:intergenic | 30.0% |
| ! | TCAGACCAACAACTTTTTAA+CGG | + | chr3.1:75559882-75559901 | MS.gene049372:CDS | 30.0% |
| !! | TCACTCAATTTACTTTTGCA+TGG | - | chr3.1:75559298-75559317 | None:intergenic | 30.0% |
| AAATCTGAGGAAAAAGAGCT+TGG | - | chr3.1:75559948-75559967 | None:intergenic | 35.0% | |
| ACATTGAGGTGAGTGTATTT+AGG | - | chr3.1:75559468-75559487 | None:intergenic | 35.0% | |
| CAGGTACAATTGCAATGATT+TGG | + | chr3.1:75559530-75559549 | MS.gene049372:intron | 35.0% | |
| CTTCTATTATAGGGATGTGA+TGG | + | chr3.1:75559019-75559038 | MS.gene049372:intron | 35.0% | |
| GACTACACTTACAATTGCAA+CGG | - | chr3.1:75559215-75559234 | None:intergenic | 35.0% | |
| GATGACACATCAAACTTTAC+TGG | + | chr3.1:75559055-75559074 | MS.gene049372:CDS | 35.0% | |
| GTAGTTGTTGTCAAAAGAAG+TGG | - | chr3.1:75559826-75559845 | None:intergenic | 35.0% | |
| GTGTGGTGAAAAAAGATGTA+TGG | - | chr3.1:75558855-75558874 | None:intergenic | 35.0% | |
| GTTTGTAGAAAGTTGTGCAT+TGG | - | chr3.1:75558666-75558685 | None:intergenic | 35.0% | |
| TCTCGAAGACAACGATAAAA+TGG | - | chr3.1:75558904-75558923 | None:intergenic | 35.0% | |
| TTACATTGACAAAGCAATCG+TGG | - | chr3.1:75558796-75558815 | None:intergenic | 35.0% | |
| ! | TAATTTGCATGATAGCTTGG+TGG | + | chr3.1:75559352-75559371 | MS.gene049372:intron | 35.0% |
| ACCAACAGCACTAAACATTG+AGG | - | chr3.1:75559482-75559501 | None:intergenic | 40.0% | |
| ACCCATCTTTATCATAGCAG+TGG | - | chr3.1:75559973-75559992 | None:intergenic | 40.0% | |
| ACCTCAATGTTTAGTGCTGT+TGG | + | chr3.1:75559478-75559497 | MS.gene049372:CDS | 40.0% | |
| AGCAATCGTGGAAGAACAAT+CGG | - | chr3.1:75558784-75558803 | None:intergenic | 40.0% | |
| ATCCGCCGTTAAAAAGTTGT+TGG | - | chr3.1:75559890-75559909 | None:intergenic | 40.0% | |
| GCCACTGCTATGATAAAGAT+GGG | + | chr3.1:75559969-75559988 | MS.gene049372:CDS | 40.0% | |
| GTTGTAGATTCGTGTCCTAA+AGG | - | chr3.1:75559700-75559719 | None:intergenic | 40.0% | |
| TGAACAGTGGAAGAGAGTTT+GGG | - | chr3.1:75558707-75558726 | None:intergenic | 40.0% | |
| TTGAACAGTGGAAGAGAGTT+TGG | - | chr3.1:75558708-75558727 | None:intergenic | 40.0% | |
| ! | CAAGTTTTACGTTCCAGGTT+GGG | - | chr3.1:75559378-75559397 | None:intergenic | 40.0% |
| ! | GACCAACAACTTTTTAACGG+CGG | + | chr3.1:75559885-75559904 | MS.gene049372:CDS | 40.0% |
| ! | TCTTCCAAGTTTTACGTTCC+AGG | - | chr3.1:75559383-75559402 | None:intergenic | 40.0% |
| !! | TTTAGGTTTGAAGTTGGTGC+CGG | - | chr3.1:75559451-75559470 | None:intergenic | 40.0% |
| AAGCAAGGTGCACAACCTTT+AGG | + | chr3.1:75559682-75559701 | MS.gene049372:CDS | 45.0% | |
| AAGTAGCGTGAGACATGAGA+AGG | - | chr3.1:75558820-75558839 | None:intergenic | 45.0% | |
| AATCGTGGAAGAACAATCGG+AGG | - | chr3.1:75558781-75558800 | None:intergenic | 45.0% | |
| AGTACTGTAGCCACTCACTA+TGG | - | chr3.1:75559922-75559941 | None:intergenic | 45.0% | |
| AGTCCTCTCACAGGATCAAA+TGG | + | chr3.1:75559999-75560018 | MS.gene049372:CDS | 45.0% | |
| AGTGCAATCCGCCATATCAA+AGG | + | chr3.1:75558733-75558752 | MS.gene049372:CDS | 45.0% | |
| ATATCAAAGGAGGCCCGAAT+GGG | + | chr3.1:75558746-75558765 | MS.gene049372:CDS | 45.0% | |
| CAAATTGCCCAAACACAGCA+GGG | + | chr3.1:75559760-75559779 | MS.gene049372:CDS | 45.0% | |
| CACGAGCAGAGTTTCTATTC+GGG | - | chr3.1:75559096-75559115 | None:intergenic | 45.0% | |
| CAGGATCAAATGGAGAGATC+AGG | + | chr3.1:75560009-75560028 | MS.gene049372:CDS | 45.0% | |
| CATTGGCACTCCCTATTATG+AGG | - | chr3.1:75558649-75558668 | None:intergenic | 45.0% | |
| CCAACCTGGAACGTAAAACT+TGG | + | chr3.1:75559376-75559395 | MS.gene049372:CDS | 45.0% | |
| CCACGAGCAGAGTTTCTATT+CGG | - | chr3.1:75559097-75559116 | None:intergenic | 45.0% | |
| CGCCACTGCTATGATAAAGA+TGG | + | chr3.1:75559968-75559987 | MS.gene049372:CDS | 45.0% | |
| GCCAGGACATACATTCTCTA+CGG | - | chr3.1:75559149-75559168 | None:intergenic | 45.0% | |
| GGTGATATTAGTCCTCTCAC+AGG | + | chr3.1:75559990-75560009 | MS.gene049372:CDS | 45.0% | |
| TACAATTGCAACGGAGTCTG+CGG | - | chr3.1:75559206-75559225 | None:intergenic | 45.0% | |
| TCAAATTGCCCAAACACAGC+AGG | + | chr3.1:75559759-75559778 | MS.gene049372:CDS | 45.0% | |
| TCTCCATTTGATCCTGTGAG+AGG | - | chr3.1:75560005-75560024 | None:intergenic | 45.0% | |
| ! | AAGGACTTGGTCACATTGTC+AGG | + | chr3.1:75559511-75559530 | MS.gene049372:CDS | 45.0% |
| ! | CCAAGTTTTACGTTCCAGGT+TGG | - | chr3.1:75559379-75559398 | None:intergenic | 45.0% |
| ! | TGGTCTTTCTAGCAAGGACT+TGG | + | chr3.1:75559498-75559517 | MS.gene049372:CDS | 45.0% |
| ! | TTGCACTGTGGATTGAACAG+TGG | - | chr3.1:75558720-75558739 | None:intergenic | 45.0% |
| !! | TGCTGTTGGTCTTTCTAGCA+AGG | + | chr3.1:75559492-75559511 | MS.gene049372:CDS | 45.0% |
| !! | TTAGGTTTGAAGTTGGTGCC+GGG | - | chr3.1:75559450-75559469 | None:intergenic | 45.0% |
| !!! | TAATTTTCAAATAATTAATT+TGG | + | chr3.1:75559621-75559640 | MS.gene049372:intron | 5.0% |
| AGGGTCAGGGGACAACAATT+TGG | + | chr3.1:75559779-75559798 | MS.gene049372:CDS | 50.0% | |
| CATAGCAGTGGCGAAATCTG+AGG | - | chr3.1:75559961-75559980 | None:intergenic | 50.0% | |
| CATATCAAAGGAGGCCCGAA+TGG | + | chr3.1:75558745-75558764 | MS.gene049372:CDS | 50.0% | |
| CATTCGGGCCTCCTTTGATA+TGG | - | chr3.1:75558747-75558766 | None:intergenic | 50.0% | |
| CCGAATAGAAACTCTGCTCG+TGG | + | chr3.1:75559094-75559113 | MS.gene049372:CDS | 50.0% | |
| CGCACACAATTGGACAAGCA+AGG | + | chr3.1:75559667-75559686 | MS.gene049372:CDS | 50.0% | |
| GCAATCCGCCATATCAAAGG+AGG | + | chr3.1:75558736-75558755 | MS.gene049372:CDS | 50.0% | |
| GCCGTAGAGAATGTATGTCC+TGG | + | chr3.1:75559145-75559164 | MS.gene049372:CDS | 50.0% | |
| GTAGCCACTCACTATGGAGT+TGG | - | chr3.1:75559916-75559935 | None:intergenic | 50.0% | |
| GTGGAAGAACAATCGGAGGA+TGG | - | chr3.1:75558777-75558796 | None:intergenic | 50.0% | |
| GTGGGAGTCTGAAGATCAAG+AGG | - | chr3.1:75559807-75559826 | None:intergenic | 50.0% | |
| TCAGCACATGATACAACGCC+AGG | - | chr3.1:75559166-75559185 | None:intergenic | 50.0% | |
| TCCACCAACTCCATAGTGAG+TGG | + | chr3.1:75559909-75559928 | MS.gene049372:CDS | 50.0% | |
| TGACTAGGTGCGCACACAAT+TGG | + | chr3.1:75559657-75559676 | MS.gene049372:intron | 50.0% | |
| TGGAAGAAGAGACGCCAAGA+CGG | + | chr3.1:75559396-75559415 | MS.gene049372:CDS | 50.0% | |
| ! | AGCAGATTGACTAGCCGTCT+TGG | - | chr3.1:75559413-75559432 | None:intergenic | 50.0% |
| !! | TGATATGGCGGATTGCACTG+TGG | - | chr3.1:75558732-75558751 | None:intergenic | 50.0% |
| GCCACTCACTATGGAGTTGG+TGG | - | chr3.1:75559913-75559932 | None:intergenic | 55.0% | |
| TCGGGCCTCCTTTGATATGG+CGG | - | chr3.1:75558744-75558763 | None:intergenic | 55.0% | |
| !! | GAGGATGGAAGCACCCATTC+GGG | - | chr3.1:75558762-75558781 | None:intergenic | 55.0% |
| !! | GGAGGATGGAAGCACCCATT+CGG | - | chr3.1:75558763-75558782 | None:intergenic | 55.0% |
| CCCAAACACAGCAGGGTCAG+GGG | + | chr3.1:75559767-75559786 | MS.gene049372:CDS | 60.0% | |
| CCCCTGACCCTGCTGTGTTT+GGG | - | chr3.1:75559770-75559789 | None:intergenic | 60.0% | |
| GCCCAAACACAGCAGGGTCA+GGG | + | chr3.1:75559766-75559785 | MS.gene049372:CDS | 60.0% | |
| TCCCCTGACCCTGCTGTGTT+TGG | - | chr3.1:75559771-75559790 | None:intergenic | 60.0% | |
| TGCCCAAACACAGCAGGGTC+AGG | + | chr3.1:75559765-75559784 | MS.gene049372:CDS | 60.0% | |
| TGCTGCTAACACCGCGATCC+CGG | + | chr3.1:75559429-75559448 | MS.gene049372:CDS | 60.0% | |
| ! | GATAGCTTGGTGGCCCAACC+TGG | + | chr3.1:75559362-75559381 | MS.gene049372:intron | 60.0% |
| !! | TGAAGTTGGTGCCGGGATCG+CGG | - | chr3.1:75559443-75559462 | None:intergenic | 60.0% |
| AACGGAGTCTGCGGCAGCGA+TGG | - | chr3.1:75559197-75559216 | None:intergenic | 65.0% | |
| AGTCTGCGGCAGCGATGGCA+AGG | - | chr3.1:75559192-75559211 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 75558593 | 75560055 | 75558593 | ID=MS.gene049372 |
| chr3.1 | mRNA | 75558593 | 75560055 | 75558593 | ID=MS.gene049372.t1;Parent=MS.gene049372 |
| chr3.1 | exon | 75558593 | 75558811 | 75558593 | ID=MS.gene049372.t1.exon1;Parent=MS.gene049372.t1 |
| chr3.1 | CDS | 75558593 | 75558811 | 75558593 | ID=cds.MS.gene049372.t1;Parent=MS.gene049372.t1 |
| chr3.1 | exon | 75559031 | 75559222 | 75559031 | ID=MS.gene049372.t1.exon2;Parent=MS.gene049372.t1 |
| chr3.1 | CDS | 75559031 | 75559222 | 75559031 | ID=cds.MS.gene049372.t1;Parent=MS.gene049372.t1 |
| chr3.1 | exon | 75559367 | 75559532 | 75559367 | ID=MS.gene049372.t1.exon3;Parent=MS.gene049372.t1 |
| chr3.1 | CDS | 75559367 | 75559532 | 75559367 | ID=cds.MS.gene049372.t1;Parent=MS.gene049372.t1 |
| chr3.1 | exon | 75559664 | 75560055 | 75559664 | ID=MS.gene049372.t1.exon4;Parent=MS.gene049372.t1 |
| chr3.1 | CDS | 75559664 | 75560055 | 75559664 | ID=cds.MS.gene049372.t1;Parent=MS.gene049372.t1 |
| Gene Sequence |
| Protein sequence |
