Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06498.t1 | XP_003602463.1 | 95.3 | 322 | 6 | 1 | 1 | 313 | 1 | 322 | 8.10E-162 | 579.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06498.t1 | Q9FLC0 | 70.1 | 318 | 82 | 2 | 9 | 313 | 7 | 324 | 4.0e-117 | 422.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06498.t1 | G7J9S2 | 95.3 | 322 | 6 | 1 | 1 | 313 | 1 | 322 | 5.8e-162 | 579.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049372 | MS.gene06498 | 0.802358 | 5.83E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009689 | MS.gene06498 | PPI |
| MS.gene26286 | MS.gene06498 | PPI |
| MS.gene049488 | MS.gene06498 | PPI |
| MS.gene49484 | MS.gene06498 | PPI |
| MS.gene06498 | MS.gene017208 | PPI |
| MS.gene06498 | MS.gene008562 | PPI |
| MS.gene06498 | MS.gene009691 | PPI |
| MS.gene26287 | MS.gene06498 | PPI |
| MS.gene06498 | MS.gene38511 | PPI |
| MS.gene017207 | MS.gene06498 | PPI |
| MS.gene06498 | MS.gene98878 | PPI |
| MS.gene06498 | MS.gene41565 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06498.t1 | MTR_3g094670 | 95.342 | 322 | 6 | 1 | 1 | 313 | 1 | 322 | 0.0 | 615 |
| MS.gene06498.t1 | MTR_3g094650 | 85.093 | 322 | 39 | 1 | 1 | 313 | 1 | 322 | 0.0 | 551 |
| MS.gene06498.t1 | MTR_3g094630 | 89.130 | 322 | 26 | 1 | 1 | 313 | 1 | 322 | 0.0 | 540 |
| MS.gene06498.t1 | MTR_5g083860 | 75.399 | 313 | 67 | 2 | 11 | 313 | 13 | 325 | 6.94e-171 | 477 |
| MS.gene06498.t1 | MTR_3g466200 | 64.650 | 314 | 101 | 2 | 10 | 313 | 7 | 320 | 1.08e-148 | 420 |
| MS.gene06498.t1 | MTR_2g084080 | 63.782 | 312 | 102 | 2 | 11 | 313 | 8 | 317 | 3.84e-141 | 401 |
| MS.gene06498.t1 | MTR_2g084020 | 62.848 | 323 | 105 | 5 | 1 | 313 | 1 | 318 | 1.78e-138 | 394 |
| MS.gene06498.t1 | MTR_2g084110 | 61.859 | 312 | 108 | 2 | 11 | 313 | 8 | 317 | 2.85e-137 | 391 |
| MS.gene06498.t1 | MTR_2g084010 | 61.920 | 323 | 108 | 4 | 1 | 313 | 1 | 318 | 8.84e-136 | 387 |
| MS.gene06498.t1 | MTR_2g084090 | 61.538 | 312 | 110 | 2 | 11 | 313 | 8 | 318 | 1.15e-135 | 387 |
| MS.gene06498.t1 | MTR_5g074970 | 61.415 | 311 | 108 | 4 | 14 | 313 | 17 | 326 | 3.25e-133 | 381 |
| MS.gene06498.t1 | MTR_2g084000 | 58.280 | 314 | 118 | 4 | 11 | 313 | 8 | 319 | 9.52e-128 | 367 |
| MS.gene06498.t1 | MTR_7g072510 | 56.688 | 314 | 125 | 2 | 9 | 313 | 1 | 312 | 5.97e-127 | 365 |
| MS.gene06498.t1 | MTR_3g072190 | 57.460 | 315 | 117 | 3 | 14 | 313 | 6 | 318 | 8.63e-123 | 355 |
| MS.gene06498.t1 | MTR_3g466180 | 58.438 | 320 | 122 | 2 | 3 | 313 | 6 | 323 | 9.37e-123 | 355 |
| MS.gene06498.t1 | MTR_4g083710 | 57.278 | 316 | 122 | 5 | 11 | 313 | 9 | 324 | 1.22e-121 | 352 |
| MS.gene06498.t1 | MTR_7g072480 | 55.096 | 314 | 130 | 2 | 9 | 313 | 5 | 316 | 1.52e-120 | 349 |
| MS.gene06498.t1 | MTR_1g115900 | 55.484 | 310 | 122 | 6 | 14 | 310 | 12 | 318 | 4.51e-116 | 338 |
| MS.gene06498.t1 | MTR_5g074860 | 55.312 | 320 | 126 | 6 | 6 | 311 | 7 | 323 | 1.94e-115 | 336 |
| MS.gene06498.t1 | MTR_4g074995 | 55.660 | 318 | 116 | 5 | 8 | 313 | 4 | 308 | 7.07e-115 | 334 |
| MS.gene06498.t1 | MTR_4g029170 | 55.556 | 297 | 119 | 4 | 28 | 313 | 27 | 321 | 7.81e-114 | 332 |
| MS.gene06498.t1 | MTR_4g029200 | 51.852 | 297 | 132 | 2 | 26 | 313 | 44 | 338 | 6.74e-111 | 325 |
| MS.gene06498.t1 | MTR_4g074990 | 53.797 | 316 | 118 | 6 | 11 | 313 | 5 | 305 | 1.82e-110 | 323 |
| MS.gene06498.t1 | MTR_4g029180 | 54.082 | 294 | 122 | 4 | 31 | 313 | 30 | 321 | 1.72e-108 | 318 |
| MS.gene06498.t1 | MTR_7g026990 | 51.780 | 309 | 136 | 4 | 15 | 313 | 17 | 322 | 3.78e-108 | 318 |
| MS.gene06498.t1 | MTR_4g029190 | 50.329 | 304 | 141 | 2 | 20 | 313 | 37 | 340 | 5.10e-108 | 318 |
| MS.gene06498.t1 | MTR_7g093370 | 51.077 | 325 | 138 | 6 | 8 | 313 | 49 | 371 | 1.16e-107 | 318 |
| MS.gene06498.t1 | MTR_5g074760 | 51.863 | 322 | 137 | 7 | 7 | 313 | 3 | 321 | 2.28e-106 | 313 |
| MS.gene06498.t1 | MTR_5g074710 | 51.242 | 322 | 139 | 7 | 7 | 313 | 3 | 321 | 4.93e-106 | 312 |
| MS.gene06498.t1 | MTR_5g074740 | 52.500 | 320 | 131 | 7 | 12 | 313 | 5 | 321 | 6.99e-106 | 312 |
| MS.gene06498.t1 | MTR_3g467600 | 48.438 | 320 | 149 | 5 | 8 | 313 | 7 | 324 | 2.93e-101 | 300 |
| MS.gene06498.t1 | MTR_3g072190 | 60.082 | 243 | 95 | 1 | 71 | 313 | 11 | 251 | 6.36e-101 | 296 |
| MS.gene06498.t1 | MTR_1g054205 | 49.538 | 325 | 140 | 7 | 10 | 313 | 5 | 326 | 7.40e-101 | 299 |
| MS.gene06498.t1 | MTR_5g021060 | 49.175 | 303 | 135 | 4 | 28 | 313 | 30 | 330 | 1.36e-100 | 299 |
| MS.gene06498.t1 | MTR_4g125940 | 48.466 | 326 | 145 | 6 | 6 | 313 | 9 | 329 | 8.38e-98 | 291 |
| MS.gene06498.t1 | MTR_4g074980 | 50.794 | 315 | 117 | 6 | 11 | 313 | 6 | 294 | 1.42e-97 | 290 |
| MS.gene06498.t1 | MTR_8g076820 | 48.232 | 311 | 142 | 4 | 17 | 310 | 19 | 327 | 1.34e-96 | 288 |
| MS.gene06498.t1 | MTR_5g017850 | 47.962 | 319 | 145 | 5 | 11 | 313 | 13 | 326 | 1.09e-95 | 286 |
| MS.gene06498.t1 | MTR_5g017860 | 46.341 | 328 | 156 | 5 | 4 | 313 | 1 | 326 | 1.04e-94 | 283 |
| MS.gene06498.t1 | MTR_2g040000 | 50.000 | 306 | 132 | 5 | 27 | 313 | 28 | 331 | 2.83e-94 | 283 |
| MS.gene06498.t1 | MTR_4g122640 | 48.173 | 301 | 139 | 4 | 28 | 313 | 38 | 336 | 5.92e-93 | 280 |
| MS.gene06498.t1 | MTR_2g029800 | 46.037 | 328 | 153 | 5 | 4 | 309 | 1 | 326 | 8.69e-93 | 280 |
| MS.gene06498.t1 | MTR_5g014100 | 48.039 | 306 | 133 | 5 | 28 | 310 | 26 | 328 | 7.40e-92 | 276 |
| MS.gene06498.t1 | MTR_2g029815 | 45.732 | 328 | 154 | 5 | 4 | 309 | 1 | 326 | 1.12e-91 | 277 |
| MS.gene06498.t1 | MTR_2g029820 | 44.817 | 328 | 157 | 5 | 4 | 309 | 1 | 326 | 1.12e-90 | 274 |
| MS.gene06498.t1 | MTR_4g074980 | 55.645 | 248 | 97 | 4 | 11 | 245 | 6 | 253 | 2.81e-90 | 270 |
| MS.gene06498.t1 | MTR_2g029750 | 46.341 | 328 | 152 | 6 | 4 | 309 | 1 | 326 | 5.55e-90 | 272 |
| MS.gene06498.t1 | MTR_1g022970 | 45.724 | 304 | 145 | 4 | 28 | 313 | 46 | 347 | 1.26e-88 | 269 |
| MS.gene06498.t1 | MTR_2g029560 | 46.278 | 309 | 146 | 5 | 19 | 309 | 15 | 321 | 7.21e-88 | 267 |
| MS.gene06498.t1 | MTR_2g029830 | 46.557 | 305 | 143 | 4 | 23 | 309 | 23 | 325 | 2.87e-87 | 266 |
| MS.gene06498.t1 | MTR_2g029740 | 44.512 | 328 | 158 | 6 | 4 | 309 | 1 | 326 | 5.54e-86 | 262 |
| MS.gene06498.t1 | MTR_2g029860 | 45.988 | 324 | 153 | 5 | 10 | 313 | 9 | 330 | 7.54e-86 | 262 |
| MS.gene06498.t1 | MTR_2g028980 | 47.022 | 319 | 148 | 6 | 9 | 309 | 11 | 326 | 1.25e-85 | 261 |
| MS.gene06498.t1 | MTR_4g125940 | 50.909 | 275 | 115 | 5 | 57 | 313 | 2 | 274 | 3.68e-85 | 257 |
| MS.gene06498.t1 | MTR_5g074860 | 46.875 | 320 | 114 | 8 | 6 | 311 | 7 | 284 | 4.55e-85 | 258 |
| MS.gene06498.t1 | MTR_2g029910 | 43.210 | 324 | 161 | 5 | 8 | 309 | 6 | 328 | 3.65e-84 | 258 |
| MS.gene06498.t1 | MTR_2g029730 | 45.631 | 309 | 148 | 4 | 19 | 309 | 16 | 322 | 3.32e-83 | 255 |
| MS.gene06498.t1 | MTR_2g029850 | 43.598 | 328 | 161 | 5 | 4 | 309 | 1 | 326 | 8.53e-82 | 251 |
| MS.gene06498.t1 | MTR_7g029030 | 41.824 | 318 | 171 | 4 | 8 | 313 | 5 | 320 | 1.25e-80 | 247 |
| MS.gene06498.t1 | MTR_4g030890 | 42.484 | 306 | 155 | 5 | 21 | 310 | 93 | 393 | 3.43e-80 | 249 |
| MS.gene06498.t1 | MTR_5g049280 | 40.193 | 311 | 165 | 6 | 23 | 313 | 28 | 337 | 1.45e-79 | 245 |
| MS.gene06498.t1 | MTR_4g031140 | 41.121 | 321 | 164 | 6 | 10 | 310 | 6 | 321 | 1.98e-79 | 245 |
| MS.gene06498.t1 | MTR_0155s0040 | 40.694 | 317 | 171 | 6 | 7 | 313 | 6 | 315 | 2.41e-78 | 241 |
| MS.gene06498.t1 | MTR_4g046713 | 40.317 | 315 | 168 | 5 | 12 | 309 | 11 | 322 | 3.38e-77 | 239 |
| MS.gene06498.t1 | MTR_1g077000 | 39.091 | 330 | 176 | 7 | 2 | 313 | 5 | 327 | 3.60e-77 | 239 |
| MS.gene06498.t1 | MTR_3g092990 | 38.580 | 324 | 181 | 4 | 4 | 310 | 1 | 323 | 2.82e-76 | 236 |
| MS.gene06498.t1 | MTR_2g088770 | 40.317 | 315 | 168 | 6 | 12 | 309 | 10 | 321 | 1.02e-74 | 233 |
| MS.gene06498.t1 | MTR_4g114210 | 41.049 | 324 | 166 | 8 | 11 | 313 | 1 | 320 | 3.18e-74 | 231 |
| MS.gene06498.t1 | MTR_2g029830 | 47.177 | 248 | 120 | 3 | 71 | 309 | 12 | 257 | 3.52e-71 | 222 |
| MS.gene06498.t1 | MTR_5g022870 | 40.000 | 325 | 162 | 9 | 9 | 313 | 5 | 316 | 4.56e-71 | 223 |
| MS.gene06498.t1 | MTR_1g025980 | 39.812 | 319 | 169 | 7 | 7 | 309 | 3 | 314 | 1.19e-70 | 222 |
| MS.gene06498.t1 | MTR_1g101830 | 39.185 | 319 | 166 | 9 | 15 | 313 | 12 | 322 | 3.20e-70 | 221 |
| MS.gene06498.t1 | MTR_7g086820 | 39.057 | 297 | 168 | 4 | 24 | 310 | 16 | 309 | 2.90e-69 | 218 |
| MS.gene06498.t1 | MTR_2g008710 | 38.509 | 322 | 172 | 7 | 10 | 309 | 4 | 321 | 4.47e-69 | 218 |
| MS.gene06498.t1 | MTR_3g092990 | 38.679 | 318 | 178 | 6 | 4 | 310 | 1 | 312 | 1.24e-68 | 216 |
| MS.gene06498.t1 | MTR_3g072210 | 57.754 | 187 | 75 | 3 | 129 | 313 | 54 | 238 | 5.31e-68 | 212 |
| MS.gene06498.t1 | MTR_8g075100 | 40.132 | 304 | 154 | 8 | 28 | 313 | 26 | 319 | 1.01e-67 | 214 |
| MS.gene06498.t1 | MTR_5g074700 | 51.111 | 225 | 92 | 6 | 92 | 313 | 5 | 214 | 1.07e-67 | 211 |
| MS.gene06498.t1 | MTR_6g027440 | 37.460 | 315 | 181 | 6 | 11 | 313 | 4 | 314 | 1.02e-66 | 212 |
| MS.gene06498.t1 | MTR_1g009750 | 37.421 | 318 | 177 | 6 | 11 | 309 | 10 | 324 | 2.69e-66 | 211 |
| MS.gene06498.t1 | MTR_7g107520 | 38.019 | 313 | 172 | 6 | 13 | 309 | 10 | 316 | 8.63e-65 | 207 |
| MS.gene06498.t1 | MTR_1g038680 | 38.721 | 297 | 162 | 4 | 32 | 309 | 33 | 328 | 7.18e-64 | 205 |
| MS.gene06498.t1 | MTR_2g437770 | 38.305 | 295 | 162 | 6 | 28 | 309 | 50 | 337 | 7.46e-64 | 205 |
| MS.gene06498.t1 | MTR_4g127670 | 39.344 | 305 | 163 | 8 | 27 | 313 | 23 | 323 | 1.45e-63 | 204 |
| MS.gene06498.t1 | MTR_5g016010 | 36.254 | 331 | 183 | 8 | 1 | 309 | 1 | 325 | 1.38e-62 | 201 |
| MS.gene06498.t1 | MTR_2g008730 | 37.658 | 316 | 159 | 7 | 10 | 309 | 4 | 297 | 1.48e-62 | 201 |
| MS.gene06498.t1 | MTR_6g043460 | 35.629 | 334 | 188 | 7 | 1 | 313 | 1 | 328 | 2.53e-62 | 201 |
| MS.gene06498.t1 | MTR_4g087965 | 37.624 | 303 | 168 | 5 | 27 | 309 | 41 | 342 | 4.76e-62 | 201 |
| MS.gene06498.t1 | MTR_2g067440 | 34.545 | 330 | 166 | 7 | 28 | 311 | 60 | 385 | 1.69e-61 | 200 |
| MS.gene06498.t1 | MTR_1g086320 | 35.404 | 322 | 187 | 4 | 9 | 309 | 8 | 329 | 2.71e-61 | 198 |
| MS.gene06498.t1 | MTR_2g077990 | 34.848 | 330 | 168 | 6 | 28 | 311 | 76 | 404 | 9.35e-61 | 199 |
| MS.gene06498.t1 | MTR_4g133800 | 36.395 | 294 | 168 | 5 | 29 | 309 | 42 | 329 | 1.20e-60 | 197 |
| MS.gene06498.t1 | MTR_4g095450 | 37.346 | 324 | 184 | 7 | 1 | 309 | 1 | 320 | 2.49e-60 | 195 |
| MS.gene06498.t1 | MTR_7g086870 | 35.034 | 294 | 177 | 5 | 26 | 310 | 20 | 308 | 3.27e-60 | 195 |
| MS.gene06498.t1 | MTR_6g043280 | 36.949 | 295 | 166 | 6 | 28 | 309 | 41 | 328 | 6.21e-60 | 195 |
| MS.gene06498.t1 | MTR_1g090760 | 34.161 | 322 | 187 | 7 | 15 | 313 | 11 | 330 | 8.62e-59 | 192 |
| MS.gene06498.t1 | MTR_2g008160 | 37.742 | 310 | 165 | 9 | 21 | 309 | 17 | 319 | 1.71e-58 | 191 |
| MS.gene06498.t1 | MTR_2g078610 | 33.934 | 333 | 167 | 8 | 28 | 311 | 76 | 404 | 3.14e-58 | 192 |
| MS.gene06498.t1 | MTR_0147s0010 | 33.654 | 312 | 177 | 5 | 25 | 311 | 74 | 380 | 2.72e-57 | 189 |
| MS.gene06498.t1 | MTR_1g066710 | 33.882 | 304 | 180 | 4 | 26 | 313 | 25 | 323 | 4.20e-57 | 187 |
| MS.gene06498.t1 | MTR_2g099175 | 34.641 | 306 | 176 | 6 | 27 | 313 | 35 | 335 | 5.47e-57 | 187 |
| MS.gene06498.t1 | MTR_1g086490 | 34.848 | 330 | 185 | 6 | 9 | 309 | 8 | 336 | 6.02e-57 | 187 |
| MS.gene06498.t1 | MTR_4g132490 | 31.692 | 325 | 207 | 4 | 3 | 313 | 4 | 327 | 9.81e-57 | 186 |
| MS.gene06498.t1 | MTR_1g066680 | 33.446 | 296 | 185 | 5 | 26 | 310 | 25 | 319 | 6.72e-56 | 184 |
| MS.gene06498.t1 | MTR_1g066640 | 34.333 | 300 | 184 | 5 | 26 | 313 | 25 | 323 | 2.69e-55 | 182 |
| MS.gene06498.t1 | MTR_0286s0010 | 33.025 | 324 | 187 | 5 | 14 | 313 | 17 | 334 | 4.32e-55 | 182 |
| MS.gene06498.t1 | MTR_6g008075 | 33.025 | 324 | 187 | 5 | 14 | 313 | 17 | 334 | 4.32e-55 | 182 |
| MS.gene06498.t1 | MTR_1g009750 | 34.494 | 316 | 172 | 7 | 11 | 309 | 10 | 307 | 6.89e-55 | 181 |
| MS.gene06498.t1 | MTR_8g062780 | 34.169 | 319 | 186 | 8 | 9 | 309 | 8 | 320 | 9.51e-55 | 181 |
| MS.gene06498.t1 | MTR_2g078280 | 33.962 | 318 | 163 | 6 | 28 | 299 | 76 | 392 | 9.71e-55 | 183 |
| MS.gene06498.t1 | MTR_3g105790 | 35.000 | 320 | 186 | 5 | 13 | 313 | 6 | 322 | 1.29e-54 | 181 |
| MS.gene06498.t1 | MTR_1g066380 | 33.115 | 305 | 181 | 5 | 26 | 313 | 25 | 323 | 1.49e-54 | 181 |
| MS.gene06498.t1 | MTR_7g072490 | 42.373 | 236 | 80 | 2 | 71 | 306 | 8 | 187 | 1.52e-52 | 172 |
| MS.gene06498.t1 | MTR_4g132110 | 31.373 | 306 | 199 | 4 | 15 | 309 | 19 | 324 | 2.62e-52 | 175 |
| MS.gene06498.t1 | MTR_6g043240 | 33.123 | 317 | 189 | 8 | 11 | 309 | 16 | 327 | 4.26e-52 | 175 |
| MS.gene06498.t1 | MTR_4g132110 | 30.868 | 311 | 199 | 5 | 15 | 309 | 19 | 329 | 5.14e-50 | 169 |
| MS.gene06498.t1 | MTR_5g033470 | 33.441 | 311 | 188 | 5 | 22 | 313 | 67 | 377 | 6.64e-48 | 165 |
| MS.gene06498.t1 | MTR_2g008160 | 34.868 | 304 | 147 | 9 | 21 | 309 | 17 | 284 | 8.39e-47 | 159 |
| MS.gene06498.t1 | MTR_1g066380 | 35.841 | 226 | 140 | 3 | 92 | 313 | 31 | 255 | 6.29e-45 | 154 |
| MS.gene06498.t1 | MTR_2g067450 | 33.224 | 304 | 177 | 7 | 28 | 311 | 11 | 308 | 8.05e-44 | 152 |
| MS.gene06498.t1 | MTR_3g105790 | 36.975 | 238 | 137 | 3 | 82 | 309 | 8 | 242 | 7.17e-41 | 143 |
| MS.gene06498.t1 | MTR_2g029880 | 41.489 | 188 | 89 | 4 | 131 | 309 | 9 | 184 | 7.00e-39 | 136 |
| MS.gene06498.t1 | MTR_2g008160 | 40.678 | 177 | 92 | 4 | 21 | 188 | 17 | 189 | 8.23e-36 | 128 |
| MS.gene06498.t1 | MTR_3g072260 | 54.688 | 128 | 43 | 3 | 14 | 126 | 6 | 133 | 1.05e-35 | 126 |
| MS.gene06498.t1 | MTR_2g077980 | 28.470 | 281 | 154 | 8 | 75 | 311 | 5 | 282 | 1.13e-28 | 112 |
| MS.gene06498.t1 | MTR_5g074770 | 49.485 | 97 | 46 | 2 | 217 | 311 | 12 | 107 | 2.79e-27 | 103 |
| MS.gene06498.t1 | MTR_2g078560 | 29.279 | 222 | 121 | 4 | 124 | 309 | 95 | 316 | 4.23e-27 | 108 |
| MS.gene06498.t1 | MTR_3g462850 | 36.620 | 142 | 78 | 5 | 183 | 313 | 9 | 149 | 1.93e-23 | 94.4 |
| MS.gene06498.t1 | MTR_5g058120 | 35.000 | 160 | 94 | 3 | 155 | 312 | 7 | 158 | 2.63e-23 | 96.7 |
| MS.gene06498.t1 | MTR_4g031040 | 36.257 | 171 | 70 | 4 | 80 | 250 | 3 | 134 | 1.70e-22 | 91.3 |
| MS.gene06498.t1 | MTR_7g086790 | 41.270 | 126 | 66 | 4 | 64 | 185 | 11 | 132 | 1.29e-21 | 90.9 |
| MS.gene06498.t1 | MTR_1g089005 | 40.152 | 132 | 63 | 2 | 14 | 130 | 1 | 131 | 8.16e-21 | 87.4 |
| MS.gene06498.t1 | MTR_3g107060 | 26.693 | 251 | 120 | 7 | 60 | 292 | 106 | 310 | 8.33e-18 | 82.8 |
| MS.gene06498.t1 | MTR_1g098320 | 43.421 | 76 | 43 | 0 | 234 | 309 | 45 | 120 | 1.53e-17 | 78.2 |
| MS.gene06498.t1 | MTR_4g073410 | 25.410 | 244 | 137 | 7 | 62 | 295 | 35 | 243 | 3.55e-16 | 77.8 |
| MS.gene06498.t1 | MTR_4g114220 | 34.815 | 135 | 61 | 4 | 40 | 160 | 15 | 136 | 1.14e-15 | 73.2 |
| MS.gene06498.t1 | MTR_7g086810 | 33.628 | 113 | 58 | 1 | 24 | 136 | 2 | 97 | 3.35e-15 | 73.9 |
| MS.gene06498.t1 | MTR_7g107500 | 41.250 | 80 | 46 | 1 | 230 | 309 | 15 | 93 | 1.69e-13 | 65.9 |
| MS.gene06498.t1 | MTR_6g048160 | 50.725 | 69 | 27 | 2 | 67 | 129 | 22 | 89 | 7.09e-13 | 63.9 |
| MS.gene06498.t1 | MTR_0147s0040 | 37.662 | 77 | 48 | 0 | 235 | 311 | 5 | 81 | 1.85e-12 | 62.4 |
| MS.gene06498.t1 | MTR_3g086710 | 53.061 | 49 | 23 | 0 | 28 | 76 | 19 | 67 | 3.59e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06498.t1 | AT5G05340 | 73.401 | 297 | 70 | 1 | 26 | 313 | 28 | 324 | 4.82e-160 | 449 |
| MS.gene06498.t1 | AT5G58400 | 60.772 | 311 | 111 | 3 | 14 | 313 | 15 | 325 | 1.35e-135 | 387 |
| MS.gene06498.t1 | AT5G58390 | 56.508 | 315 | 127 | 2 | 9 | 313 | 2 | 316 | 1.61e-125 | 362 |
| MS.gene06498.t1 | AT1G14550 | 53.674 | 313 | 128 | 6 | 9 | 309 | 10 | 317 | 1.09e-112 | 329 |
| MS.gene06498.t1 | AT1G14540 | 52.090 | 311 | 136 | 4 | 14 | 313 | 7 | 315 | 1.80e-110 | 323 |
| MS.gene06498.t1 | AT5G06720 | 50.459 | 327 | 141 | 5 | 6 | 313 | 9 | 333 | 3.03e-109 | 321 |
| MS.gene06498.t1 | AT5G06730 | 48.476 | 328 | 146 | 6 | 6 | 313 | 10 | 334 | 2.22e-103 | 307 |
| MS.gene06498.t1 | AT4G36430 | 47.962 | 319 | 147 | 4 | 12 | 313 | 14 | 330 | 2.46e-102 | 303 |
| MS.gene06498.t1 | AT2G18150 | 47.573 | 309 | 143 | 4 | 22 | 313 | 30 | 336 | 1.86e-99 | 296 |
| MS.gene06498.t1 | AT3G50990 | 48.788 | 330 | 142 | 6 | 9 | 313 | 14 | 341 | 3.92e-99 | 295 |
| MS.gene06498.t1 | AT2G18140 | 47.419 | 310 | 144 | 4 | 21 | 313 | 28 | 335 | 1.22e-98 | 294 |
| MS.gene06498.t1 | AT5G66390 | 46.296 | 324 | 153 | 5 | 9 | 313 | 12 | 333 | 2.53e-98 | 293 |
| MS.gene06498.t1 | AT1G44970 | 48.544 | 309 | 139 | 4 | 20 | 310 | 37 | 343 | 2.87e-94 | 283 |
| MS.gene06498.t1 | AT5G19890 | 46.729 | 321 | 149 | 6 | 10 | 313 | 12 | 327 | 1.91e-92 | 278 |
| MS.gene06498.t1 | AT1G49570 | 47.195 | 303 | 141 | 4 | 28 | 312 | 48 | 349 | 2.77e-91 | 276 |
| MS.gene06498.t1 | AT5G19880 | 44.923 | 325 | 154 | 6 | 12 | 313 | 7 | 329 | 1.55e-88 | 268 |
| MS.gene06498.t1 | AT2G35380 | 43.692 | 325 | 156 | 5 | 14 | 313 | 13 | 335 | 1.64e-88 | 268 |
| MS.gene06498.t1 | AT4G08770 | 45.484 | 310 | 147 | 5 | 21 | 310 | 17 | 324 | 6.89e-87 | 264 |
| MS.gene06498.t1 | AT4G16270 | 46.557 | 305 | 138 | 6 | 28 | 313 | 50 | 348 | 1.86e-86 | 263 |
| MS.gene06498.t1 | AT4G08780 | 44.194 | 310 | 151 | 5 | 24 | 313 | 20 | 327 | 8.73e-86 | 261 |
| MS.gene06498.t1 | AT1G68850 | 40.132 | 304 | 160 | 5 | 28 | 310 | 30 | 332 | 1.39e-83 | 256 |
| MS.gene06498.t1 | AT3G32980 | 43.210 | 324 | 162 | 5 | 10 | 313 | 13 | 334 | 1.41e-83 | 256 |
| MS.gene06498.t1 | AT2G38390 | 42.296 | 331 | 170 | 6 | 2 | 313 | 5 | 333 | 1.84e-83 | 256 |
| MS.gene06498.t1 | AT2G38380 | 42.424 | 330 | 169 | 6 | 3 | 313 | 6 | 333 | 1.03e-82 | 254 |
| MS.gene06498.t1 | AT3G49110 | 42.415 | 323 | 164 | 5 | 11 | 313 | 16 | 336 | 5.85e-81 | 249 |
| MS.gene06498.t1 | AT3G49120 | 43.034 | 323 | 162 | 5 | 11 | 313 | 15 | 335 | 1.09e-80 | 249 |
| MS.gene06498.t1 | AT2G22420 | 40.867 | 323 | 170 | 5 | 7 | 313 | 2 | 319 | 2.64e-80 | 247 |
| MS.gene06498.t1 | AT5G15180 | 38.650 | 326 | 172 | 7 | 12 | 313 | 8 | 329 | 8.78e-75 | 233 |
| MS.gene06498.t1 | AT3G01190 | 39.198 | 324 | 174 | 7 | 7 | 313 | 4 | 321 | 1.14e-74 | 232 |
| MS.gene06498.t1 | AT2G41480 | 39.877 | 326 | 172 | 9 | 8 | 313 | 7 | 328 | 6.31e-74 | 231 |
| MS.gene06498.t1 | AT2G35380 | 47.967 | 246 | 113 | 3 | 81 | 313 | 4 | 247 | 4.36e-73 | 226 |
| MS.gene06498.t1 | AT5G14130 | 37.931 | 319 | 174 | 6 | 9 | 309 | 14 | 326 | 1.81e-71 | 224 |
| MS.gene06498.t1 | AT5G17820 | 38.217 | 314 | 172 | 5 | 13 | 313 | 9 | 313 | 3.29e-71 | 223 |
| MS.gene06498.t1 | AT5G14130 | 37.618 | 319 | 175 | 6 | 9 | 309 | 55 | 367 | 4.58e-71 | 224 |
| MS.gene06498.t1 | AT5G64120 | 40.550 | 291 | 155 | 6 | 32 | 309 | 39 | 324 | 5.14e-71 | 223 |
| MS.gene06498.t1 | AT1G05260 | 38.855 | 332 | 174 | 9 | 4 | 313 | 1 | 325 | 5.17e-71 | 223 |
| MS.gene06498.t1 | AT5G17820 | 38.217 | 314 | 172 | 5 | 13 | 313 | 62 | 366 | 2.80e-70 | 223 |
| MS.gene06498.t1 | AT5G42180 | 39.062 | 320 | 167 | 8 | 11 | 311 | 5 | 315 | 4.86e-70 | 220 |
| MS.gene06498.t1 | AT1G05240 | 37.829 | 304 | 167 | 5 | 28 | 313 | 26 | 325 | 1.19e-69 | 219 |
| MS.gene06498.t1 | AT1G05250 | 37.829 | 304 | 167 | 5 | 28 | 313 | 26 | 325 | 1.19e-69 | 219 |
| MS.gene06498.t1 | AT4G33420 | 38.871 | 319 | 175 | 9 | 8 | 313 | 14 | 325 | 3.62e-69 | 218 |
| MS.gene06498.t1 | AT4G33420 | 38.871 | 319 | 175 | 9 | 8 | 313 | 61 | 372 | 1.80e-68 | 218 |
| MS.gene06498.t1 | AT4G11290 | 37.231 | 325 | 178 | 8 | 7 | 309 | 2 | 322 | 2.02e-67 | 214 |
| MS.gene06498.t1 | AT5G51890 | 36.760 | 321 | 181 | 7 | 7 | 310 | 4 | 319 | 6.85e-67 | 212 |
| MS.gene06498.t1 | AT3G03670 | 38.558 | 319 | 171 | 5 | 14 | 313 | 9 | 321 | 3.22e-66 | 211 |
| MS.gene06498.t1 | AT3G21770 | 37.580 | 314 | 168 | 8 | 17 | 309 | 18 | 324 | 1.10e-64 | 207 |
| MS.gene06498.t1 | AT1G77100 | 40.741 | 324 | 166 | 11 | 11 | 313 | 1 | 319 | 1.11e-64 | 206 |
| MS.gene06498.t1 | AT4G30170 | 38.614 | 303 | 169 | 5 | 26 | 313 | 25 | 325 | 2.15e-64 | 206 |
| MS.gene06498.t1 | AT5G40150 | 38.333 | 300 | 170 | 5 | 23 | 309 | 27 | 324 | 2.29e-64 | 206 |
| MS.gene06498.t1 | AT1G71695 | 38.796 | 299 | 167 | 6 | 28 | 313 | 44 | 339 | 6.67e-64 | 206 |
| MS.gene06498.t1 | AT4G37530 | 38.019 | 313 | 163 | 6 | 21 | 309 | 20 | 325 | 1.60e-63 | 204 |
| MS.gene06498.t1 | AT5G47000 | 36.280 | 328 | 188 | 6 | 1 | 309 | 1 | 326 | 1.94e-63 | 204 |
| MS.gene06498.t1 | AT4G26010 | 38.111 | 307 | 172 | 6 | 14 | 310 | 8 | 306 | 2.20e-63 | 203 |
| MS.gene06498.t1 | AT2G18980 | 35.077 | 325 | 191 | 6 | 5 | 313 | 3 | 323 | 2.47e-63 | 203 |
| MS.gene06498.t1 | AT4G26010 | 38.111 | 307 | 172 | 6 | 14 | 310 | 36 | 334 | 5.36e-63 | 203 |
| MS.gene06498.t1 | AT4G37520 | 38.312 | 308 | 159 | 7 | 26 | 309 | 25 | 325 | 6.99e-63 | 202 |
| MS.gene06498.t1 | AT5G39580 | 37.812 | 320 | 175 | 9 | 9 | 313 | 9 | 319 | 7.61e-62 | 199 |
| MS.gene06498.t1 | AT4G33870 | 32.335 | 334 | 174 | 5 | 28 | 311 | 68 | 399 | 8.82e-62 | 202 |
| MS.gene06498.t1 | AT5G67400 | 36.697 | 327 | 180 | 7 | 7 | 309 | 2 | 325 | 1.38e-61 | 199 |
| MS.gene06498.t1 | AT1G30870 | 36.545 | 301 | 170 | 6 | 28 | 313 | 51 | 345 | 3.18e-61 | 199 |
| MS.gene06498.t1 | AT4G37520 | 37.987 | 308 | 157 | 8 | 26 | 309 | 25 | 322 | 5.83e-61 | 197 |
| MS.gene06498.t1 | AT4G17690 | 36.755 | 302 | 178 | 5 | 20 | 309 | 18 | 318 | 5.95e-61 | 197 |
| MS.gene06498.t1 | AT4G31760 | 35.692 | 325 | 189 | 5 | 4 | 313 | 7 | 326 | 6.02e-61 | 197 |
| MS.gene06498.t1 | AT3G28200 | 35.452 | 299 | 179 | 5 | 23 | 309 | 16 | 312 | 1.25e-60 | 196 |
| MS.gene06498.t1 | AT3G49960 | 35.780 | 327 | 183 | 7 | 7 | 309 | 2 | 325 | 3.42e-60 | 195 |
| MS.gene06498.t1 | AT2G34060 | 37.255 | 306 | 171 | 5 | 25 | 310 | 39 | 343 | 1.37e-59 | 194 |
| MS.gene06498.t1 | AT2G24800 | 36.601 | 306 | 171 | 4 | 26 | 313 | 29 | 329 | 1.41e-58 | 191 |
| MS.gene06498.t1 | AT1G34510 | 35.484 | 310 | 182 | 7 | 14 | 313 | 8 | 309 | 1.60e-58 | 190 |
| MS.gene06498.t1 | AT4G25980 | 34.906 | 318 | 182 | 8 | 12 | 309 | 10 | 322 | 2.06e-58 | 191 |
| MS.gene06498.t1 | AT1G24110 | 33.856 | 319 | 190 | 6 | 14 | 313 | 6 | 322 | 5.83e-58 | 189 |
| MS.gene06498.t1 | AT5G64100 | 34.251 | 327 | 180 | 7 | 11 | 309 | 8 | 327 | 1.72e-56 | 186 |
| MS.gene06498.t1 | AT2G39040 | 36.422 | 313 | 176 | 7 | 22 | 313 | 40 | 350 | 3.48e-56 | 186 |
| MS.gene06498.t1 | AT5G64110 | 38.176 | 296 | 162 | 6 | 30 | 309 | 36 | 326 | 5.05e-55 | 182 |
| MS.gene06498.t1 | AT4G37530 | 38.722 | 266 | 132 | 6 | 21 | 262 | 20 | 278 | 1.47e-52 | 174 |
| MS.gene06498.t1 | AT4G21960 | 31.561 | 301 | 193 | 4 | 21 | 309 | 24 | 323 | 1.83e-52 | 175 |
| MS.gene06498.t1 | AT2G37130 | 32.026 | 306 | 196 | 5 | 20 | 313 | 22 | 327 | 2.16e-52 | 175 |
| MS.gene06498.t1 | AT2G43480 | 32.698 | 315 | 187 | 7 | 19 | 313 | 26 | 335 | 3.52e-51 | 172 |
| MS.gene06498.t1 | AT2G37130 | 32.203 | 295 | 188 | 5 | 31 | 313 | 2 | 296 | 1.22e-50 | 169 |
| MS.gene06498.t1 | AT5G24070 | 31.818 | 308 | 185 | 7 | 26 | 313 | 33 | 335 | 1.75e-49 | 168 |
| MS.gene06498.t1 | AT5G22410 | 32.927 | 328 | 193 | 12 | 3 | 310 | 2 | 322 | 2.75e-46 | 159 |
| MS.gene06498.t1 | AT3G17070 | 31.373 | 306 | 188 | 6 | 25 | 311 | 35 | 337 | 6.03e-45 | 156 |
| MS.gene06498.t1 | AT5G39580 | 35.371 | 229 | 133 | 5 | 9 | 231 | 9 | 228 | 2.71e-39 | 138 |
| MS.gene06498.t1 | AT3G17070 | 32.456 | 228 | 145 | 4 | 92 | 311 | 48 | 274 | 2.72e-35 | 129 |
| MS.gene06498.t1 | AT4G25980 | 36.813 | 182 | 106 | 3 | 12 | 186 | 55 | 234 | 3.42e-34 | 126 |
| MS.gene06498.t1 | AT2G24800 | 40.854 | 164 | 92 | 1 | 26 | 184 | 29 | 192 | 1.16e-33 | 124 |
| MS.gene06498.t1 | AT3G42570 | 37.634 | 93 | 57 | 1 | 95 | 186 | 57 | 149 | 1.40e-15 | 73.2 |
Find 79 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTATTTGTCCTCATAAT+AGG | 0.171617 | 3.2:+79152351 | MS.gene06498:CDS |
| TCCCCTGACCCTGCTGTGTT+TGG | 0.210920 | 3.2:-79153482 | None:intergenic |
| TTGAACAGTGGAAGAGAGTT+TGG | 0.279654 | 3.2:-79152421 | None:intergenic |
| ACATTGAGGTGAGTGTATTT+AGG | 0.309316 | 3.2:-79153179 | None:intergenic |
| CATTCGGGCCTCGTTTGATA+TGG | 0.316349 | 3.2:-79152460 | None:intergenic |
| CCACGAGCAGAGTTTCTATT+CGG | 0.318939 | 3.2:-79152808 | None:intergenic |
| TAGATGACATCAAACTTTAC+TGG | 0.321370 | 3.2:+79152769 | MS.gene06498:intron |
| TTCTATTTGTCCTCATAATA+GGG | 0.335750 | 3.2:+79152352 | MS.gene06498:CDS |
| CCCCTGACCCTGCTGTGTTT+GGG | 0.339534 | 3.2:-79153481 | None:intergenic |
| AGGACCGTTAACTCTTAGTT+AGG | 0.341398 | 3.2:-79153761 | None:intergenic |
| TAGATTAACCATGATCAGTT+TGG | 0.380143 | 3.2:+79152329 | MS.gene06498:CDS |
| TGACTAGGTGCGCACACAAT+TGG | 0.387097 | 3.2:+79153371 | MS.gene06498:intron |
| AGTGTATTTAGGTTTGAAGT+TGG | 0.403846 | 3.2:-79153168 | None:intergenic |
| AAGCAAGGTGCACAACCTTT+AGG | 0.406716 | 3.2:+79153396 | MS.gene06498:CDS |
| AAGGACTTGGTCACATTGTC+AGG | 0.407167 | 3.2:+79153225 | MS.gene06498:CDS |
| TGCCCAAACACAGCAGGGTC+AGG | 0.415043 | 3.2:+79153479 | MS.gene06498:CDS |
| CACGAGCAGAGTTTCTATTC+GGG | 0.419229 | 3.2:-79152807 | None:intergenic |
| GAGGATGGAAGCACCCATTC+GGG | 0.431374 | 3.2:-79152475 | None:intergenic |
| TGGTCTTTCTAGCAAGGACT+TGG | 0.435885 | 3.2:+79153212 | MS.gene06498:CDS |
| AGGGTCAGGGGACAACAATT+TGG | 0.441277 | 3.2:+79153493 | MS.gene06498:CDS |
| TGAACAGTGGAAGAGAGTTT+GGG | 0.444166 | 3.2:-79152420 | None:intergenic |
| ACCTCAATGTTTAGTGCTGT+TGG | 0.451105 | 3.2:+79153192 | MS.gene06498:CDS |
| GGAGGATGGAAGCACCCATT+CGG | 0.458965 | 3.2:-79152476 | None:intergenic |
| TGCTGTTGGTCTTTCTAGCA+AGG | 0.464803 | 3.2:+79153206 | MS.gene06498:CDS |
| AGTACTGTAGCCACTCACTA+TGG | 0.474377 | 3.2:-79153633 | None:intergenic |
| CGCCACTGCTATGATAAAGA+TGG | 0.475391 | 3.2:+79153682 | MS.gene06498:CDS |
| CATTGGCACTCCCTATTATG+AGG | 0.477774 | 3.2:-79152362 | None:intergenic |
| CAGGATCAAATGGAGAGATC+AGG | 0.478815 | 3.2:+79153723 | MS.gene06498:CDS |
| TAATTTGCATGATAGCTTGG+TGG | 0.486043 | 3.2:+79153066 | MS.gene06498:intron |
| AAATAGAACCAAACTGATCA+TGG | 0.488287 | 3.2:-79152337 | None:intergenic |
| AGTCCTCTCACAGGATCAAA+TGG | 0.488459 | 3.2:+79153713 | MS.gene06498:CDS |
| GATAGCTTGGTGGCCCAACC+TGG | 0.492782 | 3.2:+79153076 | MS.gene06498:intron |
| GTTTGTAGAAAGTTGTGCAT+TGG | 0.497733 | 3.2:-79152379 | None:intergenic |
| AGCAATCGTGGAAGAACAAT+CGG | 0.497821 | 3.2:-79152497 | None:intergenic |
| CAAGAACATTGTTCAAAACA+AGG | 0.500999 | 3.2:+79153562 | MS.gene06498:CDS |
| TCAAATTGCCCAAACACAGC+AGG | 0.504823 | 3.2:+79153473 | MS.gene06498:CDS |
| AGCAGATTGACTAGCCGTCT+TGG | 0.506189 | 3.2:-79153124 | None:intergenic |
| AACGGAGTCTGCGGCAGCGA+TGG | 0.508742 | 3.2:-79152908 | None:intergenic |
| GTTGTAGATTCGTGTCCTAA+AGG | 0.511429 | 3.2:-79153411 | None:intergenic |
| CATATCAAACGAGGCCCGAA+TGG | 0.514844 | 3.2:+79152461 | MS.gene06498:CDS |
| AGCAAATGAAGTATCTATGT+TGG | 0.515266 | 3.2:-79153438 | None:intergenic |
| TTTAGGTTTGAAGTTGGTGC+CGG | 0.515530 | 3.2:-79153162 | None:intergenic |
| TGCTGCTAACACCGCGATCC+CGG | 0.519447 | 3.2:+79153143 | MS.gene06498:CDS |
| ATATCAAACGAGGCCCGAAT+GGG | 0.524679 | 3.2:+79152462 | MS.gene06498:CDS |
| CCAACCTGGAACGTAAAACT+TGG | 0.525815 | 3.2:+79153090 | MS.gene06498:CDS |
| GCCACTCACTATGGAGTTGG+TGG | 0.526661 | 3.2:-79153624 | None:intergenic |
| GTAGTTGTTGTCAAAAGAAG+TGG | 0.535285 | 3.2:-79153537 | None:intergenic |
| TCAGCACATGATACAACGCC+AGG | 0.549232 | 3.2:-79152877 | None:intergenic |
| TGAAGTTGGTGCCGGGATCG+CGG | 0.550314 | 3.2:-79153154 | None:intergenic |
| GCCGTAGAGAATGTATGTCC+TGG | 0.552010 | 3.2:+79152859 | MS.gene06498:CDS |
| TTAGGTTTGAAGTTGGTGCC+GGG | 0.562545 | 3.2:-79153161 | None:intergenic |
| GCCCAAACACAGCAGGGTCA+GGG | 0.564568 | 3.2:+79153480 | MS.gene06498:CDS |
| AGTCTGCGGCAGCGATGGCA+AGG | 0.565639 | 3.2:-79152903 | None:intergenic |
| TCGGGCCTCGTTTGATATGG+CGG | 0.565711 | 3.2:-79152457 | None:intergenic |
| GCCACTGCTATGATAAAGAT+GGG | 0.570911 | 3.2:+79153683 | MS.gene06498:CDS |
| CCGAATAGAAACTCTGCTCG+TGG | 0.583680 | 3.2:+79152808 | MS.gene06498:CDS |
| GTGGGAGTCTGAAGATCAAG+AGG | 0.583868 | 3.2:-79153518 | None:intergenic |
| AAGAACATTGTTCAAAACAA+GGG | 0.585421 | 3.2:+79153563 | MS.gene06498:CDS |
| TAGTTGTTGTCAAAAGAAGT+GGG | 0.588511 | 3.2:-79153536 | None:intergenic |
| GCCAGGACATACATTCTCTA+CGG | 0.589807 | 3.2:-79152860 | None:intergenic |
| GACTACACTTACAATTGCAA+CGG | 0.601677 | 3.2:-79152926 | None:intergenic |
| GGTGATATTAGTCCTCTCAC+AGG | 0.606148 | 3.2:+79153704 | MS.gene06498:CDS |
| GTGGAAGAACAATCGGAGGA+TGG | 0.613042 | 3.2:-79152490 | None:intergenic |
| GTAGCCACTCACTATGGAGT+TGG | 0.614655 | 3.2:-79153627 | None:intergenic |
| ACCCATCTTTATCATAGCAG+TGG | 0.616128 | 3.2:-79153684 | None:intergenic |
| CATAGCAGTGGCGAAATCTG+AGG | 0.616746 | 3.2:-79153672 | None:intergenic |
| TCTCCATTTGATCCTGTGAG+AGG | 0.617319 | 3.2:-79153716 | None:intergenic |
| TACAATTGCAACGGAGTCTG+CGG | 0.621872 | 3.2:-79152917 | None:intergenic |
| CAAATTGCCCAAACACAGCA+GGG | 0.622167 | 3.2:+79153474 | MS.gene06498:CDS |
| CGCACACAATTGGACAAGCA+AGG | 0.634921 | 3.2:+79153381 | MS.gene06498:CDS |
| ACCAACAGCACTAAACATTG+AGG | 0.638042 | 3.2:-79153193 | None:intergenic |
| CCCAAACACAGCAGGGTCAG+GGG | 0.648779 | 3.2:+79153481 | MS.gene06498:CDS |
| TCCACCAACTCCATAGTGAG+TGG | 0.659928 | 3.2:+79153623 | MS.gene06498:CDS |
| TTACATTGACAAAGCAATCG+TGG | 0.667907 | 3.2:-79152509 | None:intergenic |
| TGGAAGAAGAGACGCCAAGA+CGG | 0.677274 | 3.2:+79153110 | MS.gene06498:CDS |
| GCAATCCGCCATATCAAACG+AGG | 0.705126 | 3.2:+79152452 | MS.gene06498:CDS |
| AATCGTGGAAGAACAATCGG+AGG | 0.712838 | 3.2:-79152494 | None:intergenic |
| TGATATGGCGGATTGCACTG+TGG | 0.730705 | 3.2:-79152445 | None:intergenic |
| TTGCACTGTGGATTGAACAG+TGG | 0.752833 | 3.2:-79152433 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATAATTTCTCATTT+GGG | + | chr3.2:79153303-79153322 | MS.gene06498:intron | 10.0% |
| !! | CAAATATATAATTTCTCATT+TGG | + | chr3.2:79153302-79153321 | MS.gene06498:intron | 15.0% |
| !!! | AATATGTTACTTCTATTATA+GGG | + | chr3.2:79152726-79152745 | MS.gene06498:intron | 15.0% |
| !!! | TAATATGTTACTTCTATTAT+AGG | + | chr3.2:79152725-79152744 | MS.gene06498:intron | 15.0% |
| !! | AAATATAAGTAAAACAGCAT+AGG | - | chr3.2:79153278-79153297 | None:intergenic | 20.0% |
| ! | AAACATCAATAAAGAAAGTG+TGG | - | chr3.2:79152588-79152607 | None:intergenic | 25.0% |
| ! | AAGAACATTGTTCAAAACAA+GGG | + | chr3.2:79153563-79153582 | MS.gene06498:CDS | 25.0% |
| ! | GGTATCTTAATTAATTGACT+AGG | + | chr3.2:79153356-79153375 | MS.gene06498:intron | 25.0% |
| ! | TTCTATTTGTCCTCATAATA+GGG | + | chr3.2:79152352-79152371 | MS.gene06498:CDS | 25.0% |
| !!! | TTTTAATTTGCATGATAGCT+TGG | + | chr3.2:79153063-79153082 | MS.gene06498:intron | 25.0% |
| AAATAGAACCAAACTGATCA+TGG | - | chr3.2:79152340-79152359 | None:intergenic | 30.0% | |
| ATTAACTCATTGTGCTAATG+AGG | - | chr3.2:79152700-79152719 | None:intergenic | 30.0% | |
| CAAGAACATTGTTCAAAACA+AGG | + | chr3.2:79153562-79153581 | MS.gene06498:CDS | 30.0% | |
| GTTCTATTTGTCCTCATAAT+AGG | + | chr3.2:79152351-79152370 | MS.gene06498:CDS | 30.0% | |
| TAGATGACATCAAACTTTAC+TGG | + | chr3.2:79152769-79152788 | MS.gene06498:intron | 30.0% | |
| TAGATTAACCATGATCAGTT+TGG | + | chr3.2:79152329-79152348 | MS.gene06498:CDS | 30.0% | |
| TAGTTGTTGTCAAAAGAAGT+GGG | - | chr3.2:79153539-79153558 | None:intergenic | 30.0% | |
| TTCTATTATAGGGATGTGAT+GGG | + | chr3.2:79152736-79152755 | MS.gene06498:intron | 30.0% | |
| ! | AGCAAATGAAGTATCTATGT+TGG | - | chr3.2:79153441-79153460 | None:intergenic | 30.0% |
| ! | AGTGTATTTAGGTTTGAAGT+TGG | - | chr3.2:79153171-79153190 | None:intergenic | 30.0% |
| ! | TCAGACCAACAACTTTTTAA+CGG | + | chr3.2:79153596-79153615 | MS.gene06498:CDS | 30.0% |
| !! | TCACTCAATTTACTTTTGCA+TGG | - | chr3.2:79153012-79153031 | None:intergenic | 30.0% |
| AAATCTGAGGAAAAAGAGCT+TGG | - | chr3.2:79153662-79153681 | None:intergenic | 35.0% | |
| ACATTGAGGTGAGTGTATTT+AGG | - | chr3.2:79153182-79153201 | None:intergenic | 35.0% | |
| CTTCTATTATAGGGATGTGA+TGG | + | chr3.2:79152735-79152754 | MS.gene06498:intron | 35.0% | |
| GACTACACTTACAATTGCAA+CGG | - | chr3.2:79152929-79152948 | None:intergenic | 35.0% | |
| GTAGTTGTTGTCAAAAGAAG+TGG | - | chr3.2:79153540-79153559 | None:intergenic | 35.0% | |
| GTGTGGTGAAAAAAGATGTA+TGG | - | chr3.2:79152571-79152590 | None:intergenic | 35.0% | |
| GTTTGTAGAAAGTTGTGCAT+TGG | - | chr3.2:79152382-79152401 | None:intergenic | 35.0% | |
| TCTCGAAGACAACGATAAAA+TGG | - | chr3.2:79152620-79152639 | None:intergenic | 35.0% | |
| TTACATTGACAAAGCAATCG+TGG | - | chr3.2:79152512-79152531 | None:intergenic | 35.0% | |
| ! | TAATTTGCATGATAGCTTGG+TGG | + | chr3.2:79153066-79153085 | MS.gene06498:intron | 35.0% |
| ACCAACAGCACTAAACATTG+AGG | - | chr3.2:79153196-79153215 | None:intergenic | 40.0% | |
| ACCCATCTTTATCATAGCAG+TGG | - | chr3.2:79153687-79153706 | None:intergenic | 40.0% | |
| ACCTCAATGTTTAGTGCTGT+TGG | + | chr3.2:79153192-79153211 | MS.gene06498:CDS | 40.0% | |
| AGCAATCGTGGAAGAACAAT+CGG | - | chr3.2:79152500-79152519 | None:intergenic | 40.0% | |
| ATCCGCCGTTAAAAAGTTGT+TGG | - | chr3.2:79153604-79153623 | None:intergenic | 40.0% | |
| GCCACTGCTATGATAAAGAT+GGG | + | chr3.2:79153683-79153702 | MS.gene06498:CDS | 40.0% | |
| GTTGTAGATTCGTGTCCTAA+AGG | - | chr3.2:79153414-79153433 | None:intergenic | 40.0% | |
| TGAACAGTGGAAGAGAGTTT+GGG | - | chr3.2:79152423-79152442 | None:intergenic | 40.0% | |
| TTGAACAGTGGAAGAGAGTT+TGG | - | chr3.2:79152424-79152443 | None:intergenic | 40.0% | |
| ! | CAAGTTTTACGTTCCAGGTT+GGG | - | chr3.2:79153092-79153111 | None:intergenic | 40.0% |
| ! | GACCAACAACTTTTTAACGG+CGG | + | chr3.2:79153599-79153618 | MS.gene06498:CDS | 40.0% |
| ! | TCTTCCAAGTTTTACGTTCC+AGG | - | chr3.2:79153097-79153116 | None:intergenic | 40.0% |
| !! | TTTAGGTTTGAAGTTGGTGC+CGG | - | chr3.2:79153165-79153184 | None:intergenic | 40.0% |
| AAGCAAGGTGCACAACCTTT+AGG | + | chr3.2:79153396-79153415 | MS.gene06498:CDS | 45.0% | |
| AAGTAGCGTGAGACATGAGA+AGG | - | chr3.2:79152536-79152555 | None:intergenic | 45.0% | |
| AATCGTGGAAGAACAATCGG+AGG | - | chr3.2:79152497-79152516 | None:intergenic | 45.0% | |
| AGTACTGTAGCCACTCACTA+TGG | - | chr3.2:79153636-79153655 | None:intergenic | 45.0% | |
| AGTCCTCTCACAGGATCAAA+TGG | + | chr3.2:79153713-79153732 | MS.gene06498:CDS | 45.0% | |
| ATATCAAACGAGGCCCGAAT+GGG | + | chr3.2:79152462-79152481 | MS.gene06498:CDS | 45.0% | |
| CAAATTGCCCAAACACAGCA+GGG | + | chr3.2:79153474-79153493 | MS.gene06498:CDS | 45.0% | |
| CACGAGCAGAGTTTCTATTC+GGG | - | chr3.2:79152810-79152829 | None:intergenic | 45.0% | |
| CAGGATCAAATGGAGAGATC+AGG | + | chr3.2:79153723-79153742 | MS.gene06498:CDS | 45.0% | |
| CATTGGCACTCCCTATTATG+AGG | - | chr3.2:79152365-79152384 | None:intergenic | 45.0% | |
| CCAACCTGGAACGTAAAACT+TGG | + | chr3.2:79153090-79153109 | MS.gene06498:CDS | 45.0% | |
| CCACGAGCAGAGTTTCTATT+CGG | - | chr3.2:79152811-79152830 | None:intergenic | 45.0% | |
| CGCCACTGCTATGATAAAGA+TGG | + | chr3.2:79153682-79153701 | MS.gene06498:CDS | 45.0% | |
| GCCAGGACATACATTCTCTA+CGG | - | chr3.2:79152863-79152882 | None:intergenic | 45.0% | |
| GGTGATATTAGTCCTCTCAC+AGG | + | chr3.2:79153704-79153723 | MS.gene06498:CDS | 45.0% | |
| TACAATTGCAACGGAGTCTG+CGG | - | chr3.2:79152920-79152939 | None:intergenic | 45.0% | |
| TCAAATTGCCCAAACACAGC+AGG | + | chr3.2:79153473-79153492 | MS.gene06498:CDS | 45.0% | |
| TCTCCATTTGATCCTGTGAG+AGG | - | chr3.2:79153719-79153738 | None:intergenic | 45.0% | |
| ! | AAGGACTTGGTCACATTGTC+AGG | + | chr3.2:79153225-79153244 | MS.gene06498:CDS | 45.0% |
| ! | CCAAGTTTTACGTTCCAGGT+TGG | - | chr3.2:79153093-79153112 | None:intergenic | 45.0% |
| ! | TGGTCTTTCTAGCAAGGACT+TGG | + | chr3.2:79153212-79153231 | MS.gene06498:CDS | 45.0% |
| ! | TTGCACTGTGGATTGAACAG+TGG | - | chr3.2:79152436-79152455 | None:intergenic | 45.0% |
| !! | TGCTGTTGGTCTTTCTAGCA+AGG | + | chr3.2:79153206-79153225 | MS.gene06498:CDS | 45.0% |
| !! | TTAGGTTTGAAGTTGGTGCC+GGG | - | chr3.2:79153164-79153183 | None:intergenic | 45.0% |
| !!! | TAATTTTCAAATAATTAATT+TGG | + | chr3.2:79153335-79153354 | MS.gene06498:intron | 5.0% |
| AGGGTCAGGGGACAACAATT+TGG | + | chr3.2:79153493-79153512 | MS.gene06498:CDS | 50.0% | |
| CATAGCAGTGGCGAAATCTG+AGG | - | chr3.2:79153675-79153694 | None:intergenic | 50.0% | |
| CATATCAAACGAGGCCCGAA+TGG | + | chr3.2:79152461-79152480 | MS.gene06498:CDS | 50.0% | |
| CATTCGGGCCTCGTTTGATA+TGG | - | chr3.2:79152463-79152482 | None:intergenic | 50.0% | |
| CCGAATAGAAACTCTGCTCG+TGG | + | chr3.2:79152808-79152827 | MS.gene06498:CDS | 50.0% | |
| CGCACACAATTGGACAAGCA+AGG | + | chr3.2:79153381-79153400 | MS.gene06498:CDS | 50.0% | |
| GCAATCCGCCATATCAAACG+AGG | + | chr3.2:79152452-79152471 | MS.gene06498:CDS | 50.0% | |
| GCCGTAGAGAATGTATGTCC+TGG | + | chr3.2:79152859-79152878 | MS.gene06498:CDS | 50.0% | |
| GTAGCCACTCACTATGGAGT+TGG | - | chr3.2:79153630-79153649 | None:intergenic | 50.0% | |
| GTGGAAGAACAATCGGAGGA+TGG | - | chr3.2:79152493-79152512 | None:intergenic | 50.0% | |
| GTGGGAGTCTGAAGATCAAG+AGG | - | chr3.2:79153521-79153540 | None:intergenic | 50.0% | |
| TCAGCACATGATACAACGCC+AGG | - | chr3.2:79152880-79152899 | None:intergenic | 50.0% | |
| TCCACCAACTCCATAGTGAG+TGG | + | chr3.2:79153623-79153642 | MS.gene06498:CDS | 50.0% | |
| TGACTAGGTGCGCACACAAT+TGG | + | chr3.2:79153371-79153390 | MS.gene06498:intron | 50.0% | |
| TGGAAGAAGAGACGCCAAGA+CGG | + | chr3.2:79153110-79153129 | MS.gene06498:CDS | 50.0% | |
| ! | AGCAGATTGACTAGCCGTCT+TGG | - | chr3.2:79153127-79153146 | None:intergenic | 50.0% |
| !! | TGATATGGCGGATTGCACTG+TGG | - | chr3.2:79152448-79152467 | None:intergenic | 50.0% |
| GCCACTCACTATGGAGTTGG+TGG | - | chr3.2:79153627-79153646 | None:intergenic | 55.0% | |
| TCGGGCCTCGTTTGATATGG+CGG | - | chr3.2:79152460-79152479 | None:intergenic | 55.0% | |
| !! | GAGGATGGAAGCACCCATTC+GGG | - | chr3.2:79152478-79152497 | None:intergenic | 55.0% |
| !! | GGAGGATGGAAGCACCCATT+CGG | - | chr3.2:79152479-79152498 | None:intergenic | 55.0% |
| CCCAAACACAGCAGGGTCAG+GGG | + | chr3.2:79153481-79153500 | MS.gene06498:CDS | 60.0% | |
| CCCCTGACCCTGCTGTGTTT+GGG | - | chr3.2:79153484-79153503 | None:intergenic | 60.0% | |
| GCCCAAACACAGCAGGGTCA+GGG | + | chr3.2:79153480-79153499 | MS.gene06498:CDS | 60.0% | |
| TCCCCTGACCCTGCTGTGTT+TGG | - | chr3.2:79153485-79153504 | None:intergenic | 60.0% | |
| TGCCCAAACACAGCAGGGTC+AGG | + | chr3.2:79153479-79153498 | MS.gene06498:CDS | 60.0% | |
| TGCTGCTAACACCGCGATCC+CGG | + | chr3.2:79153143-79153162 | MS.gene06498:CDS | 60.0% | |
| ! | GATAGCTTGGTGGCCCAACC+TGG | + | chr3.2:79153076-79153095 | MS.gene06498:intron | 60.0% |
| !! | TGAAGTTGGTGCCGGGATCG+CGG | - | chr3.2:79153157-79153176 | None:intergenic | 60.0% |
| AACGGAGTCTGCGGCAGCGA+TGG | - | chr3.2:79152911-79152930 | None:intergenic | 65.0% | |
| AGTCTGCGGCAGCGATGGCA+AGG | - | chr3.2:79152906-79152925 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 79152309 | 79153769 | 79152309 | ID=MS.gene06498 |
| chr3.2 | mRNA | 79152309 | 79153769 | 79152309 | ID=MS.gene06498.t1;Parent=MS.gene06498 |
| chr3.2 | exon | 79152309 | 79152527 | 79152309 | ID=MS.gene06498.t1.exon1;Parent=MS.gene06498.t1 |
| chr3.2 | CDS | 79152309 | 79152527 | 79152309 | ID=cds.MS.gene06498.t1;Parent=MS.gene06498.t1 |
| chr3.2 | exon | 79152772 | 79152936 | 79152772 | ID=MS.gene06498.t1.exon2;Parent=MS.gene06498.t1 |
| chr3.2 | CDS | 79152772 | 79152936 | 79152772 | ID=cds.MS.gene06498.t1;Parent=MS.gene06498.t1 |
| chr3.2 | exon | 79153081 | 79153246 | 79153081 | ID=MS.gene06498.t1.exon3;Parent=MS.gene06498.t1 |
| chr3.2 | CDS | 79153081 | 79153246 | 79153081 | ID=cds.MS.gene06498.t1;Parent=MS.gene06498.t1 |
| chr3.2 | exon | 79153378 | 79153769 | 79153378 | ID=MS.gene06498.t1.exon4;Parent=MS.gene06498.t1 |
| chr3.2 | CDS | 79153378 | 79153769 | 79153378 | ID=cds.MS.gene06498.t1;Parent=MS.gene06498.t1 |
| Gene Sequence |
| Protein sequence |
