AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050501

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050501.t1 MTR_7g114550 93.885 278 17 0 1 278 7 284 0.0 553
MS.gene050501.t1 MTR_7g114550 72.800 125 33 1 267 390 335 459 2.23e-52 181
MS.gene050501.t1 MTR_7g114560 90.647 278 26 0 1 278 7 284 0.0 536
MS.gene050501.t1 MTR_7g114560 90.323 93 9 0 298 390 367 459 3.74e-51 177
MS.gene050501.t1 MTR_7g114490 82.734 278 48 0 1 278 7 284 2.38e-172 491
MS.gene050501.t1 MTR_7g114490 64.179 67 24 0 298 364 367 433 3.03e-23 101
MS.gene050501.t1 MTR_5g076700 82.437 279 48 1 1 278 7 285 3.11e-170 484
MS.gene050501.t1 MTR_5g076700 70.968 93 27 0 298 390 368 460 1.30e-38 144
MS.gene050501.t1 MTR_7g114520 78.571 280 58 2 1 278 8 287 8.37e-165 470
MS.gene050501.t1 MTR_7g114520 69.892 93 28 0 298 390 370 462 2.23e-36 138
MS.gene050501.t1 MTR_7g114470 77.778 279 61 1 1 278 8 286 1.78e-161 461
MS.gene050501.t1 MTR_7g114470 68.817 93 29 0 298 390 370 462 3.31e-38 143
MS.gene050501.t1 MTR_1g040315 50.239 418 174 7 1 390 6 417 9.03e-138 399
MS.gene050501.t1 MTR_1g040215 42.308 442 188 8 1 377 6 445 7.94e-122 360
MS.gene050501.t1 MTR_1g040320 46.287 404 186 7 1 375 6 407 1.51e-120 356
MS.gene050501.t1 MTR_1g040175 56.071 280 119 3 1 278 6 283 2.50e-111 333
MS.gene050501.t1 MTR_1g040175 42.391 92 52 1 300 390 367 458 2.90e-16 80.5
MS.gene050501.t1 MTR_1g040195 53.901 282 98 4 1 278 6 259 1.27e-100 305
MS.gene050501.t1 MTR_1g040195 49.485 97 45 2 298 390 340 436 1.95e-23 101
MS.gene050501.t1 MTR_1g081660 54.286 280 125 3 1 278 15 293 2.30e-99 303
MS.gene050501.t1 MTR_1g081660 46.835 79 42 0 298 376 374 452 4.42e-17 82.8
MS.gene050501.t1 MTR_7g114420 52.985 268 89 5 160 390 1 268 9.24e-87 264
MS.gene050501.t1 MTR_7g114500 79.452 146 30 0 1 146 7 152 4.25e-81 245
MS.gene050501.t1 MTR_3g051790 75.352 142 35 0 1 142 10 151 2.45e-71 221
MS.gene050501.t1 MTR_7g114510 72.662 139 37 1 141 278 7 145 5.47e-70 223
MS.gene050501.t1 MTR_7g114510 64.516 93 33 0 298 390 228 320 1.26e-32 125
MS.gene050501.t1 MTR_0042s0230 62.676 142 53 0 1 142 6 147 8.02e-62 196
MS.gene050501.t1 MTR_0502s0010 44.980 249 103 7 95 339 1 219 7.09e-58 189
MS.gene050501.t1 MTR_8g039950 64.228 123 44 0 1 123 6 128 2.13e-54 176
MS.gene050501.t1 MTR_3g098980 34.657 277 174 5 4 277 14 286 2.06e-50 175
MS.gene050501.t1 MTR_8g096530 33.333 282 174 6 2 276 5 279 5.41e-49 172
MS.gene050501.t1 MTR_7g027175 34.307 274 172 4 8 277 20 289 3.33e-48 169
MS.gene050501.t1 MTR_3g112180 32.517 286 175 8 7 282 14 291 4.00e-38 143
MS.gene050501.t1 MTR_4g055170 31.786 280 169 7 11 275 19 291 2.33e-37 140
MS.gene050501.t1 MTR_7g110610 31.159 276 144 8 3 263 4 248 4.10e-35 133
MS.gene050501.t1 MTR_1g053315 30.000 330 202 10 12 314 26 353 6.33e-34 131
MS.gene050501.t1 MTR_2g105330 31.734 271 176 6 11 277 10 275 2.34e-31 124
MS.gene050501.t1 MTR_3g465930 31.183 279 177 8 11 277 17 292 7.92e-31 123
MS.gene050501.t1 MTR_0042s0190 49.593 123 54 3 160 278 1 119 1.76e-30 119
MS.gene050501.t1 MTR_0042s0190 49.367 79 39 1 298 375 201 279 5.63e-20 89.7
MS.gene050501.t1 MTR_4g007540 38.857 175 103 3 36 210 34 204 2.38e-30 121
MS.gene050501.t1 MTR_2g064495 31.365 271 177 6 11 277 10 275 4.35e-30 120
MS.gene050501.t1 MTR_3g465910 31.769 277 175 8 11 277 17 289 7.66e-29 118
MS.gene050501.t1 MTR_8g075610 32.540 252 161 8 30 277 19 265 4.08e-28 114
MS.gene050501.t1 MTR_3g465990 31.579 285 165 13 11 277 17 289 2.50e-26 110
MS.gene050501.t1 MTR_3g465980 32.384 281 168 11 11 277 17 289 4.51e-25 106
MS.gene050501.t1 MTR_3g051820 65.517 87 29 1 304 390 6 91 2.77e-24 95.9
MS.gene050501.t1 MTR_2g015430 29.741 232 152 6 54 278 53 280 5.62e-24 103
MS.gene050501.t1 MTR_7g085930 27.875 287 181 10 11 277 13 293 1.95e-23 102
MS.gene050501.t1 MTR_6g053810 32.599 227 135 10 58 272 70 290 4.32e-23 100
MS.gene050501.t1 MTR_3g465880 29.758 289 166 10 11 275 17 292 6.02e-23 100
MS.gene050501.t1 MTR_3g465950 29.643 280 176 10 11 275 17 290 9.85e-23 99.8
MS.gene050501.t1 MTR_3g071320 26.549 339 223 9 3 320 4 337 1.81e-22 99.0
MS.gene050501.t1 MTR_7g114417 81.818 55 9 1 84 137 29 83 2.84e-22 90.1
MS.gene050501.t1 MTR_7g114417 91.667 36 3 0 1 36 7 42 5.15e-15 70.1
MS.gene050501.t1 MTR_3g465870 29.078 282 179 10 11 277 19 294 8.00e-22 97.1
MS.gene050501.t1 MTR_7g085990 27.143 280 178 9 10 269 8 281 1.20e-21 96.7
MS.gene050501.t1 MTR_7g056087 24.398 332 227 11 1 312 1 328 2.04e-21 95.9
MS.gene050501.t1 MTR_7g084910 27.273 253 170 7 24 267 37 284 3.52e-21 95.1
MS.gene050501.t1 MTR_7g084940 25.000 320 222 9 8 315 20 333 7.14e-21 94.4
MS.gene050501.t1 MTR_7g086000 26.117 291 182 11 1 269 1 280 1.48e-20 93.6
MS.gene050501.t1 MTR_0042s0190 49.367 79 39 1 298 375 136 214 1.68e-20 89.7
MS.gene050501.t1 MTR_3g049150 26.429 280 184 9 12 277 10 281 3.95e-20 92.0
MS.gene050501.t1 MTR_3g026950 26.224 286 181 9 12 277 10 285 4.35e-20 92.0
MS.gene050501.t1 MTR_4g013050 30.625 160 105 2 14 173 14 167 6.28e-20 91.3
MS.gene050501.t1 MTR_4g127650 26.236 263 175 8 30 279 35 291 2.49e-19 89.7
MS.gene050501.t1 MTR_5g090880 30.693 202 117 7 56 244 64 255 1.37e-18 87.4
MS.gene050501.t1 MTR_4g097090 32.164 171 110 4 12 179 17 184 1.85e-17 84.0
MS.gene050501.t1 MTR_5g090830 31.604 212 120 7 2 202 8 205 2.32e-17 84.0
MS.gene050501.t1 MTR_5g090810 27.413 259 158 8 2 244 8 252 3.47e-17 83.2
MS.gene050501.t1 MTR_5g084870 28.402 169 109 5 10 174 9 169 1.76e-16 81.3
MS.gene050501.t1 MTR_3g086020 26.446 242 151 10 4 242 5 222 3.49e-16 80.1
MS.gene050501.t1 MTR_5g026320 30.078 256 153 14 17 263 33 271 6.59e-16 79.3
MS.gene050501.t1 MTR_3g450690 30.000 200 115 5 56 244 69 254 2.18e-15 77.8
MS.gene050501.t1 MTR_8g079950 28.655 171 106 5 10 174 9 169 3.53e-15 77.0
MS.gene050501.t1 MTR_3g035000 30.317 221 96 11 194 363 43 256 7.86e-15 75.1
MS.gene050501.t1 MTR_0190s0020 25.092 271 178 9 18 278 30 285 8.10e-15 75.9
MS.gene050501.t1 MTR_3g450710 27.854 219 130 6 40 244 46 250 9.02e-15 75.9
MS.gene050501.t1 MTR_4g088765 45.946 74 40 0 1 74 6 79 1.55e-14 70.1
MS.gene050501.t1 MTR_2g007880 23.958 288 181 11 11 287 24 284 5.77e-14 73.6
MS.gene050501.t1 MTR_3g101960 26.101 318 207 11 18 317 30 337 6.02e-14 73.6
MS.gene050501.t1 MTR_4g022670 23.488 281 175 10 18 278 25 285 6.11e-13 70.5
MS.gene050501.t1 MTR_3g101930 25.080 311 198 12 31 317 44 343 6.44e-13 70.1
MS.gene050501.t1 MTR_8g079980 21.555 283 180 7 10 273 9 268 6.51e-13 70.1
MS.gene050501.t1 MTR_4g022720 23.443 273 179 10 18 278 25 279 6.82e-13 70.1
MS.gene050501.t1 MTR_4g022800 24.101 278 177 9 18 278 25 285 2.83e-12 68.2
MS.gene050501.t1 MTR_8g467580 27.638 199 130 7 10 203 9 198 2.89e-12 68.2
MS.gene050501.t1 MTR_3g102020 25.392 319 207 13 19 317 31 338 4.20e-12 67.8
MS.gene050501.t1 MTR_7g026860 23.929 280 179 9 18 280 25 287 6.58e-12 67.0
MS.gene050501.t1 MTR_3g100150 26.950 141 100 1 43 183 49 186 1.05e-11 66.6
MS.gene050501.t1 MTR_2g036780 26.744 172 122 2 12 183 20 187 1.73e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050501.t1 AT3G03480 42.237 438 183 10 2 373 17 450 1.34e-100 306
MS.gene050501.t1 AT5G17540 38.646 458 209 12 2 390 7 461 9.80e-96 294
MS.gene050501.t1 AT3G48720 32.740 281 181 6 2 278 7 283 8.28e-49 171
MS.gene050501.t1 AT5G41040 34.643 280 173 5 4 277 17 292 3.23e-47 167
MS.gene050501.t1 AT5G41040 34.643 280 173 5 4 277 33 308 3.86e-47 167
MS.gene050501.t1 AT5G63560 34.643 280 169 6 4 278 9 279 2.45e-46 164
MS.gene050501.t1 AT1G27620 35.897 273 158 9 8 272 13 276 5.21e-39 145
MS.gene050501.t1 AT3G62160 31.095 283 174 7 2 278 3 270 1.62e-31 124
MS.gene050501.t1 AT5G48930 31.273 275 173 7 11 277 10 276 1.95e-30 121
MS.gene050501.t1 AT5G57840 32.609 276 167 8 4 269 3 269 1.24e-28 116
MS.gene050501.t1 AT1G03390 32.867 286 162 11 8 273 21 296 4.21e-28 115
MS.gene050501.t1 AT2G25150 28.571 294 158 10 10 275 19 288 1.52e-26 110
MS.gene050501.t1 AT3G47170 26.471 306 182 11 2 275 10 304 3.97e-24 103
MS.gene050501.t1 AT1G31490 30.952 252 141 10 25 263 29 260 1.01e-23 102
MS.gene050501.t1 AT5G07080 27.931 290 183 8 2 275 12 291 1.13e-23 102
MS.gene050501.t1 AT2G23510 28.028 289 176 10 4 275 13 286 3.46e-23 101
MS.gene050501.t1 AT1G28680 29.434 265 168 9 25 278 27 283 1.02e-22 99.0
MS.gene050501.t1 AT2G19070 31.383 188 124 3 30 215 29 213 1.07e-22 99.8
MS.gene050501.t1 AT1G28680 29.434 265 168 9 25 278 27 283 1.47e-22 99.4
MS.gene050501.t1 AT1G65450 29.412 272 170 10 24 284 39 299 2.37e-22 98.6
MS.gene050501.t1 AT2G40230 28.720 289 176 12 8 278 9 285 1.86e-21 95.9
MS.gene050501.t1 AT3G26040 25.091 275 164 9 10 269 9 256 1.63e-19 90.1
MS.gene050501.t1 AT1G78990 29.717 212 135 5 37 244 45 246 1.92e-17 84.0
MS.gene050501.t1 AT1G32910 34.839 155 87 4 45 199 56 196 5.55e-17 82.8
MS.gene050501.t1 AT1G24420 30.742 283 168 10 10 283 11 274 1.63e-16 81.3
MS.gene050501.t1 AT1G24420 30.742 283 168 10 10 283 11 274 1.63e-16 81.3
MS.gene050501.t1 AT1G24430 30.660 212 111 10 39 242 42 225 1.76e-16 81.3
MS.gene050501.t1 AT4G15390 26.937 271 171 11 4 265 8 260 1.09e-15 79.0
MS.gene050501.t1 AT4G15390 26.937 271 171 11 4 265 8 260 1.09e-15 79.0
MS.gene050501.t1 AT5G16410 27.027 222 143 8 59 274 91 299 1.42e-15 78.6
MS.gene050501.t1 AT4G31910 25.869 259 166 8 41 275 46 302 2.20e-15 77.8
MS.gene050501.t1 AT5G23970 28.824 170 111 3 10 179 9 168 9.31e-15 75.9
MS.gene050501.t1 AT3G30280 28.729 181 117 6 4 179 6 179 9.21e-14 72.8
MS.gene050501.t1 AT5G47950 28.492 179 115 5 4 179 6 174 2.96e-13 71.2
MS.gene050501.t1 AT5G42830 26.510 298 172 13 8 279 16 292 3.30e-12 68.2

Find 116 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTTCCTTAATGGTATT+TGG 0.143670 7.2:-2911182 None:intergenic
ATCCATTTGCGGGAAGAATT+AGG 0.192366 7.2:+2908539 MS.gene050501:CDS
CACTCGGTGTAAGATGATTT+TGG 0.236072 7.2:-2911850 None:intergenic
AGCAGTATCTTCTTCCTTAA+TGG 0.250041 7.2:-2911189 None:intergenic
GCACATTTAAGAACCTTAAC+AGG 0.260011 7.2:-2908490 None:intergenic
GTCCCACATAAGAATATAAA+TGG 0.280574 7.2:+2911743 MS.gene050501:CDS
CCATTCAACCTGTGTGGAAT+AGG 0.307886 7.2:+2911090 MS.gene050501:CDS
TCCATTTGCGGGAAGAATTA+GGG 0.325568 7.2:+2908540 MS.gene050501:CDS
CATTGTATGGTTCCAATTCA+TGG 0.325987 7.2:-2910997 None:intergenic
TCTTCAGAGGGCAAACAAAT+TGG 0.336728 7.2:-2911785 None:intergenic
CATAGCTGCTCTTCGTCTCT+TGG 0.341686 7.2:+2911250 MS.gene050501:CDS
GGGTCTTTCTCTACCATTGA+TGG 0.356699 7.2:-2908469 None:intergenic
GTGAATTTCGGATGGGGTAA+AGG 0.370225 7.2:+2911662 MS.gene050501:CDS
TGAATTTCGGATGGGGTAAA+GGG 0.380086 7.2:+2911663 MS.gene050501:CDS
CATGACTGCATGGGCAGAAA+TGG 0.383185 7.2:+2911046 MS.gene050501:CDS
ATTCTTATGTGGGACGATAT+AGG 0.390250 7.2:-2911735 None:intergenic
AACTCCACTGCATAACCAAA+TGG 0.398172 7.2:-2911500 None:intergenic
TCACGACGGTACAAACTATA+AGG 0.401473 7.2:-2911894 None:intergenic
GGGTGATGGGCGCAAGTTGA+TGG 0.402242 7.2:+2908564 MS.gene050501:CDS
TGGGGTAAAGGGGTGTATGG+TGG 0.406331 7.2:+2911674 MS.gene050501:CDS
GCAGCTGGTGGCACCAACTC+TGG 0.409555 7.2:-2908352 None:intergenic
GTTTATTACTATCCATTTGC+GGG 0.409976 7.2:+2908529 MS.gene050501:CDS
AAGCTTTGTGGAAACCCATT+TGG 0.411357 7.2:+2911485 MS.gene050501:CDS
GGTTCATAGTGGCCATGAAT+TGG 0.412673 7.2:+2910985 MS.gene050501:CDS
TCCCTAATTCTTCCCGCAAA+TGG 0.413944 7.2:-2908541 None:intergenic
AGGCTCTCAGAAGTGAATTT+CGG 0.414115 7.2:+2911650 MS.gene050501:CDS
CACAAAAGCATTGCAGTTAG+AGG 0.414539 7.2:+2911337 MS.gene050501:CDS
ACCACTGCAGCGAAGCTTTG+TGG 0.415000 7.2:+2911473 MS.gene050501:CDS
TCTCCATTTATATTCTTATG+TGG 0.422113 7.2:-2911746 None:intergenic
CCGTCCCATTCGACAGATAC+AGG 0.425686 7.2:+2908729 MS.gene050501:CDS
CAACTCCTATACGATGTTCC+AGG 0.433965 7.2:+2908688 MS.gene050501:CDS
CATTCAACCTGTGTGGAATA+GGG 0.435556 7.2:+2911091 MS.gene050501:CDS
CCTATTCCACACAGGTTGAA+TGG 0.443311 7.2:-2911090 None:intergenic
GAACATCGTATAGGAGTTGA+TGG 0.450535 7.2:-2908684 None:intergenic
GGAGTTGCAAAAGGTGGGGC+TGG 0.459644 7.2:+2911695 MS.gene050501:CDS
AAAATTGTTCGTATTCAAGA+TGG 0.465942 7.2:-2911154 None:intergenic
CTCCATTTATATTCTTATGT+GGG 0.466477 7.2:-2911745 None:intergenic
CAGCTGCATCACCCATTGTA+TGG 0.471746 7.2:-2911010 None:intergenic
GGATGGGGTAAAGGGGTGTA+TGG 0.476221 7.2:+2911671 MS.gene050501:CDS
GAAGAGGTTTGCAAAAGAGT+TGG 0.476327 7.2:+2911811 MS.gene050501:CDS
TCGATAATTTGTTCTGAGCC+TGG 0.481518 7.2:-2908706 None:intergenic
GTGCATTGACGAAGGTGAAA+TGG 0.485395 7.2:-2911275 None:intergenic
TCACAAGGAGTGGGTGCAGC+TGG 0.491045 7.2:-2908367 None:intergenic
CTTTCTCTACCATTGATGGT+TGG 0.494685 7.2:-2908465 None:intergenic
TGTTTATTACTATCCATTTG+CGG 0.499605 7.2:+2908528 MS.gene050501:CDS
GTGGAATAGGGAGATTCTAA+TGG 0.500842 7.2:+2911103 MS.gene050501:CDS
CTATCGTCACCAACCATCAA+TGG 0.501354 7.2:+2908456 MS.gene050501:CDS
CTGAGCCTGGAACATCGTAT+AGG 0.505911 7.2:-2908693 None:intergenic
CAAGAAGGTATGCGTTTCAA+TGG 0.506787 7.2:+2908418 MS.gene050501:CDS
TCTCAGATTTGACTCGTGCT+AGG 0.509741 7.2:+2911630 MS.gene050501:CDS
TGAACCTGTATCTGTCGAAT+GGG 0.511977 7.2:-2908733 None:intergenic
GTGTATGGTGGAGTTGCAAA+AGG 0.512005 7.2:+2911686 MS.gene050501:CDS
ACTCCACTGCATAACCAAAT+GGG 0.518855 7.2:-2911499 None:intergenic
TATGGTGGAGTTGCAAAAGG+TGG 0.519898 7.2:+2911689 MS.gene050501:CDS
ATTTGGTTATGCAGTGGAGT+TGG 0.521840 7.2:+2911502 MS.gene050501:CDS
CTGGTGGCACCAACTCTGGT+TGG 0.521971 7.2:-2908348 None:intergenic
GATGTAACACTTGATCAGTT+TGG 0.522332 7.2:+2908631 MS.gene050501:CDS
TCCACAAAGCTTCGCTGCAG+TGG 0.527787 7.2:-2911474 None:intergenic
TAGTTTAACTTCACAAGGAG+TGG 0.532006 7.2:-2908377 None:intergenic
GGAAGAATTAGGGAGGGTGA+TGG 0.533251 7.2:+2908550 MS.gene050501:CDS
AAGGTAGACATCACAAAACT+AGG 0.537832 7.2:-2911875 None:intergenic
GAAGAATTAGGGAGGGTGAT+GGG 0.538143 7.2:+2908551 MS.gene050501:CDS
AATGAACATGACACCTTCAC+CGG 0.539549 7.2:-2908596 None:intergenic
CATACAATGGGTGATGCAGC+TGG 0.540298 7.2:+2911011 MS.gene050501:CDS
CTCTAAAGAAGAAAGATCGA+TGG 0.544782 7.2:-2911220 None:intergenic
TTGAACCTGTATCTGTCGAA+TGG 0.546447 7.2:-2908734 None:intergenic
ATGAATTGGAACCATACAAT+GGG 0.552002 7.2:+2910999 MS.gene050501:CDS
GCGGAGGTGCCAACCAGAGT+TGG 0.552570 7.2:+2908339 MS.gene050501:CDS
GGTAGAGAAAGACCCTGTTA+AGG 0.553972 7.2:+2908477 MS.gene050501:CDS
ATGGTGGAGTTGCAAAAGGT+GGG 0.555845 7.2:+2911690 MS.gene050501:CDS
AGTTTAACTTCACAAGGAGT+GGG 0.556068 7.2:-2908376 None:intergenic
GGGACGATATAGGTTGATCC+AGG 0.558026 7.2:-2911725 None:intergenic
GAATTTCGGATGGGGTAAAG+GGG 0.562673 7.2:+2911664 MS.gene050501:CDS
GCAGTTAGAGGCAGATGAAG+AGG 0.562947 7.2:+2911349 MS.gene050501:CDS
TGCCCTCTGAAGATATGAAG+AGG 0.566120 7.2:+2911795 MS.gene050501:CDS
TGAGACAATTCATGACTGCA+TGG 0.568023 7.2:+2911036 MS.gene050501:CDS
CTCAGAAGTGAATTTCGGAT+GGG 0.571165 7.2:+2911655 MS.gene050501:CDS
CAAGGAGTGGGTGCAGCTGG+TGG 0.572177 7.2:-2908364 None:intergenic
GAGACAATTCATGACTGCAT+GGG 0.576060 7.2:+2911037 MS.gene050501:CDS
TCTCAGAAGTGAATTTCGGA+TGG 0.578397 7.2:+2911654 MS.gene050501:CDS
GTCACACGTCTCAAGTGTGG+TGG 0.581788 7.2:+2910963 MS.gene050501:CDS
ATAGGAGTTGATGGAAGCAA+TGG 0.584604 7.2:-2908675 None:intergenic
AAACCTCTTCATATCTTCAG+AGG 0.585787 7.2:-2911798 None:intergenic
AGTTGATGGAAGCAATGGAA+TGG 0.589862 7.2:-2908670 None:intergenic
TGATGGAAGCAATGGAATGG+AGG 0.590351 7.2:-2908667 None:intergenic
TTCCACACAGGTTGAATGGA+AGG 0.590931 7.2:-2911086 None:intergenic
ATGGTGGATTGTACCGGTGA+AGG 0.594235 7.2:+2908583 MS.gene050501:CDS
ATCACAAAACTAGGAGCACT+CGG 0.604510 7.2:-2911866 None:intergenic
AACCTCTTCATATCTTCAGA+GGG 0.608993 7.2:-2911797 None:intergenic
AAACCCATTTGGTTATGCAG+TGG 0.611003 7.2:+2911496 MS.gene050501:CDS
TGATGGGCGCAAGTTGATGG+TGG 0.614524 7.2:+2908567 MS.gene050501:CDS
TGACGATAGATAAATATGAC+AGG 0.615201 7.2:-2908442 None:intergenic
CAAGTGTGGTGGGTTCATAG+TGG 0.622481 7.2:+2910974 MS.gene050501:CDS
GATAATAGTTTAACTTCACA+AGG 0.623062 7.2:-2908382 None:intergenic
TCACACGTCTCAAGTGTGGT+GGG 0.628748 7.2:+2910964 MS.gene050501:CDS
GGTTGCATGTAATGCGTGGA+GGG 0.631354 7.2:-2911133 None:intergenic
AAGTTGATGGTGGATTGTAC+CGG 0.636458 7.2:+2908577 MS.gene050501:CDS
TCAGAAGTGAATTTCGGATG+GGG 0.636971 7.2:+2911656 MS.gene050501:CDS
CATGAATTGGAACCATACAA+TGG 0.637861 7.2:+2910998 MS.gene050501:CDS
GTCCTTCCATTCAACCTGTG+TGG 0.637995 7.2:+2911084 MS.gene050501:CDS
AAAGAGTTGGATGAGATGCT+TGG 0.638972 7.2:+2911824 MS.gene050501:CDS
CACATTTAAGAACCTTAACA+GGG 0.639455 7.2:-2908489 None:intergenic
AGAATCTCCCTATTCCACAC+AGG 0.648794 7.2:-2911098 None:intergenic
TCTGACATAGATGATCAAGA+AGG 0.650798 7.2:+2908403 MS.gene050501:CDS
TGAAGCGATAAGATCGAATG+TGG 0.660160 7.2:-2911297 None:intergenic
CAGGTCACACGTCTCAAGTG+TGG 0.663378 7.2:+2910960 MS.gene050501:intron
CGTTAATGTTCACAGTGCGG+AGG 0.669288 7.2:+2908323 None:intergenic
ATTTGCGGGAAGAATTAGGG+AGG 0.677321 7.2:+2908543 MS.gene050501:CDS
CCTGTATCTGTCGAATGGGA+CGG 0.677705 7.2:-2908729 None:intergenic
TGGTGGAGTTGCAAAAGGTG+GGG 0.679716 7.2:+2911691 MS.gene050501:CDS
GCATGGGCAGAAATGGCTCG+AGG 0.681407 7.2:+2911053 MS.gene050501:CDS
TTTGCGGGAAGAATTAGGGA+GGG 0.682068 7.2:+2908544 MS.gene050501:CDS
AGATGGTTGCATGTAATGCG+TGG 0.696303 7.2:-2911137 None:intergenic
CGAATGTGGTGCATTGACGA+AGG 0.710870 7.2:-2911283 None:intergenic
TGGTTGCATGTAATGCGTGG+AGG 0.724762 7.2:-2911134 None:intergenic
CATCGTTAATGTTCACAGTG+CGG 0.743005 7.2:+2908320 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATATATAAAGAAAATATA+TGG + chr7.2:2910324-2910343 MS.gene050501:intron 10.0%
!! TATTATATTTATATTATGAC+AGG + chr7.2:2910941-2910960 MS.gene050501:intron 10.0%
!!! AAACTCTAAAAAAATATATA+TGG - chr7.2:2909047-2909066 None:intergenic 10.0%
!!! TTATAAGAATAATGTTATTT+TGG + chr7.2:2910392-2910411 MS.gene050501:intron 10.0%
!!! TTTGATTTTGATTAAATTAT+AGG - chr7.2:2910515-2910534 None:intergenic 10.0%
!! AATCAAATTATAGGAAAAAA+CGG + chr7.2:2909842-2909861 MS.gene050501:intron 15.0%
!! CATATATACTCAAAAAAAAA+AGG + chr7.2:2909668-2909687 MS.gene050501:intron 15.0%
!! TCAATCTGATTATAATATAT+TGG - chr7.2:2910735-2910754 None:intergenic 15.0%
!! TCTTTATCTAATCAAATTAT+AGG + chr7.2:2909833-2909852 MS.gene050501:intron 15.0%
!! TGTAAATATAAAAACGTTAA+TGG - chr7.2:2909805-2909824 None:intergenic 15.0%
!! TTAAATATAGTCATATTTGT+AGG - chr7.2:2908935-2908954 None:intergenic 15.0%
!! TTATTCAAATACCATAAAAT+TGG - chr7.2:2909731-2909750 None:intergenic 15.0%
!!! AAAAACCTCTTTTATAATTA+GGG + chr7.2:2910032-2910051 MS.gene050501:intron 15.0%
!!! AAATATAAGTATAGTTTGTT+AGG + chr7.2:2910463-2910482 MS.gene050501:intron 15.0%
!!! ATTAGCTAATTTTTAGATTT+TGG - chr7.2:2909207-2909226 None:intergenic 15.0%
!!! CTTATTAAATTGTTTTGAAA+AGG + chr7.2:2909550-2909569 MS.gene050501:intron 15.0%
!!! CTTTTCAAAACAATTTAATA+AGG - chr7.2:2909552-2909571 None:intergenic 15.0%
!!! GTCAATTTTTAAAAAAAGTA+AGG - chr7.2:2910620-2910639 None:intergenic 15.0%
!!! TAAAAACCTCTTTTATAATT+AGG + chr7.2:2910031-2910050 MS.gene050501:intron 15.0%
!!! TAAAGAAAATATATGGTTTT+TGG + chr7.2:2910331-2910350 MS.gene050501:intron 15.0%
!!! TTGAAAAATATTTTTTGACA+AGG + chr7.2:2909637-2909656 MS.gene050501:intron 15.0%
!! AAGATGTATTCAATACAATT+TGG + chr7.2:2909173-2909192 MS.gene050501:intron 20.0%
!! ATAAAAGATAAGATTAGAGT+TGG - chr7.2:2910253-2910272 None:intergenic 20.0%
!! ATCAAATTATAGGAAAAAAC+GGG + chr7.2:2909843-2909862 MS.gene050501:intron 20.0%
!! ATTAACGCAATAAAAAAAAG+CGG + chr7.2:2910584-2910603 MS.gene050501:intron 20.0%
!! CTAAAAATTAGCTAATAATG+AGG + chr7.2:2909211-2909230 MS.gene050501:intron 20.0%
!! GAAAAAAATAGTAAAAATCG+AGG - chr7.2:2909025-2909044 None:intergenic 20.0%
!! TCAAAGTTTAATAGCATAAT+TGG - chr7.2:2910372-2910391 None:intergenic 20.0%
!! TTCAATCATATAGATAACTT+TGG - chr7.2:2909104-2909123 None:intergenic 20.0%
!! TTGTAAACTTGTAATCAATT+CGG - chr7.2:2910892-2910911 None:intergenic 20.0%
!!! ATTCATATGTTTTCTTCAAA+TGG - chr7.2:2910807-2910826 None:intergenic 20.0%
!!! CAAATTGATATCCAATTTTA+TGG + chr7.2:2909717-2909736 MS.gene050501:intron 20.0%
!!! GTTTCTCTAAAAAAAAATGA+TGG - chr7.2:2909133-2909152 None:intergenic 20.0%
!!! TTTAAAGCATGTGAAATATA+GGG - chr7.2:2910710-2910729 None:intergenic 20.0%
! AAAATTGTTCGTATTCAAGA+TGG - chr7.2:2911157-2911176 None:intergenic 25.0%
! AAATAAGGTAAGTGCATATA+AGG - chr7.2:2910777-2910796 None:intergenic 25.0%
! AATAAGGTAAGTGCATATAA+GGG - chr7.2:2910776-2910795 None:intergenic 25.0%
! AGTTGCTAAAAACAAAAAAG+AGG + chr7.2:2908850-2908869 MS.gene050501:intron 25.0%
! ATCTTATGGTTATTAAGGAA+CGG + chr7.2:2911576-2911595 MS.gene050501:intron 25.0%
! CAAACATTAACTTATTGATC+TGG + chr7.2:2909951-2909970 MS.gene050501:intron 25.0%
! CTCCATTTATATTCTTATGT+GGG - chr7.2:2911748-2911767 None:intergenic 25.0%
! TCAATATGTACTTCACAAAT+TGG + chr7.2:2909458-2909477 MS.gene050501:intron 25.0%
! TCTCCATTTATATTCTTATG+TGG - chr7.2:2911749-2911768 None:intergenic 25.0%
! TGTTTATTACTATCCATTTG+CGG + chr7.2:2908528-2908547 MS.gene050501:CDS 25.0%
! TTCCTTAATAACCATAAGAT+CGG - chr7.2:2911576-2911595 None:intergenic 25.0%
!! AAAATTGACGTATTTTCGTA+CGG + chr7.2:2910631-2910650 MS.gene050501:intron 25.0%
!! AAGGGCAAAACTTTTTAAAT+GGG - chr7.2:2910758-2910777 None:intergenic 25.0%
!! GATAATAGTTTAACTTCACA+AGG - chr7.2:2908385-2908404 None:intergenic 25.0%
!! GTTTAAAGCATGTGAAATAT+AGG - chr7.2:2910711-2910730 None:intergenic 25.0%
!! TAAGGGCAAAACTTTTTAAA+TGG - chr7.2:2910759-2910778 None:intergenic 25.0%
!!! CGAAGATTTTTTTATCACAT+GGG - chr7.2:2909364-2909383 None:intergenic 25.0%
AACTTGTAATCAATTCGGTT+TGG - chr7.2:2910887-2910906 None:intergenic 30.0%
ATGAATTGGAACCATACAAT+GGG + chr7.2:2910999-2911018 MS.gene050501:CDS 30.0%
ATGAGTTCATGAGCTTAATT+TGG - chr7.2:2909411-2909430 None:intergenic 30.0%
ATTAAAAGCTGAAGTTACAG+AGG + chr7.2:2911532-2911551 MS.gene050501:intron 30.0%
CACATTTAAGAACCTTAACA+GGG - chr7.2:2908492-2908511 None:intergenic 30.0%
GGTGTTTATTTACAACTGTA+AGG + chr7.2:2911597-2911616 MS.gene050501:intron 30.0%
GTCCCACATAAGAATATAAA+TGG + chr7.2:2911743-2911762 MS.gene050501:CDS 30.0%
GTTTATTACTATCCATTTGC+GGG + chr7.2:2908529-2908548 MS.gene050501:CDS 30.0%
TCGAACCCTAATTATAAAAG+AGG - chr7.2:2910040-2910059 None:intergenic 30.0%
TCTTCTTCCTTAATGGTATT+TGG - chr7.2:2911185-2911204 None:intergenic 30.0%
TGACGATAGATAAATATGAC+AGG - chr7.2:2908445-2908464 None:intergenic 30.0%
TGAGTTCATGAGCTTAATTT+GGG - chr7.2:2909410-2909429 None:intergenic 30.0%
! ATCTTATCGCTTCATGTTTT+TGG + chr7.2:2911306-2911325 MS.gene050501:CDS 30.0%
! TAAACCACTAAGTTTTTGCA+AGG + chr7.2:2909483-2909502 MS.gene050501:intron 30.0%
! TTTTCCTTGCAAAAACTTAG+TGG - chr7.2:2909490-2909509 None:intergenic 30.0%
! TTTTTCGCCAAATACCATTA+AGG + chr7.2:2911175-2911194 MS.gene050501:CDS 30.0%
!! AACTCGTTTATTTTCAACGT+TGG - chr7.2:2909435-2909454 None:intergenic 30.0%
!!! GCGAAGATTTTTTTATCACA+TGG - chr7.2:2909365-2909384 None:intergenic 30.0%
AAACCTCTTCATATCTTCAG+AGG - chr7.2:2911801-2911820 None:intergenic 35.0%
AACCTCTTCATATCTTCAGA+GGG - chr7.2:2911800-2911819 None:intergenic 35.0%
AAGGTAGACATCACAAAACT+AGG - chr7.2:2911878-2911897 None:intergenic 35.0%
ACGCAATAAAAAAAAGCGGA+CGG + chr7.2:2910588-2910607 MS.gene050501:intron 35.0%
ACTGTACCAATATGCAACAT+AGG + chr7.2:2910678-2910697 MS.gene050501:intron 35.0%
AGCAGTATCTTCTTCCTTAA+TGG - chr7.2:2911192-2911211 None:intergenic 35.0%
AGCATGTGAAATATAGGGTT+TGG - chr7.2:2910705-2910724 None:intergenic 35.0%
ATGACGTAAAATTCATCGAG+AGG + chr7.2:2908986-2909005 MS.gene050501:intron 35.0%
ATTCTTATGTGGGACGATAT+AGG - chr7.2:2911738-2911757 None:intergenic 35.0%
CATGAATTGGAACCATACAA+TGG + chr7.2:2910998-2911017 MS.gene050501:CDS 35.0%
CATTGTATGGTTCCAATTCA+TGG - chr7.2:2911000-2911019 None:intergenic 35.0%
GATGTAACACTTGATCAGTT+TGG + chr7.2:2908631-2908650 MS.gene050501:CDS 35.0%
GCACATTTAAGAACCTTAAC+AGG - chr7.2:2908493-2908512 None:intergenic 35.0%
TCAAATGGAGCATGGAAATA+AGG - chr7.2:2910792-2910811 None:intergenic 35.0%
TCTGACATAGATGATCAAGA+AGG + chr7.2:2908403-2908422 MS.gene050501:CDS 35.0%
TTACCGTAATATCCAACAAG+TGG - chr7.2:2911428-2911447 None:intergenic 35.0%
TTTCTATGCACATGACTTCA+TGG - chr7.2:2909073-2909092 None:intergenic 35.0%
TTTGGACCTATGTTGCATAT+TGG - chr7.2:2910687-2910706 None:intergenic 35.0%
TTTGTAGAGACAAGCAAATG+AGG - chr7.2:2909261-2909280 None:intergenic 35.0%
! AGTTTAACTTCACAAGGAGT+GGG - chr7.2:2908379-2908398 None:intergenic 35.0%
! CTCTAAAGAAGAAAGATCGA+TGG - chr7.2:2911223-2911242 None:intergenic 35.0%
! TAGTTTAACTTCACAAGGAG+TGG - chr7.2:2908380-2908399 None:intergenic 35.0%
! TGTTTTCTTCAAATGGAGCA+TGG - chr7.2:2910800-2910819 None:intergenic 35.0%
!! GTGATGTTGATTTAGGATCT+TGG + chr7.2:2909973-2909992 MS.gene050501:intron 35.0%
!! TGATCTGGTGATGTTGATTT+AGG + chr7.2:2909966-2909985 MS.gene050501:intron 35.0%
AAACCCATTTGGTTATGCAG+TGG + chr7.2:2911496-2911515 MS.gene050501:CDS 40.0%
AAAGAGTTGGATGAGATGCT+TGG + chr7.2:2911824-2911843 MS.gene050501:CDS 40.0%
AACTCCACTGCATAACCAAA+TGG - chr7.2:2911503-2911522 None:intergenic 40.0%
AATGAACATGACACCTTCAC+CGG - chr7.2:2908599-2908618 None:intergenic 40.0%
ACTCCACTGCATAACCAAAT+GGG - chr7.2:2911502-2911521 None:intergenic 40.0%
AGAGGAATACATGCATTCTG+TGG + chr7.2:2911550-2911569 MS.gene050501:intron 40.0%
AGGCTCTCAGAAGTGAATTT+CGG + chr7.2:2911650-2911669 MS.gene050501:CDS 40.0%
AGTACGTATGCTTCAGAGTT+TGG - chr7.2:2910073-2910092 None:intergenic 40.0%
ATCCATTTGCGGGAAGAATT+AGG + chr7.2:2908539-2908558 MS.gene050501:CDS 40.0%
ATTTGGTTATGCAGTGGAGT+TGG + chr7.2:2911502-2911521 MS.gene050501:CDS 40.0%
CAATAAAAAAAAGCGGACGG+TGG + chr7.2:2910591-2910610 MS.gene050501:intron 40.0%
CATTCAACCTGTGTGGAATA+GGG + chr7.2:2911091-2911110 MS.gene050501:CDS 40.0%
CTCAGAAGTGAATTTCGGAT+GGG + chr7.2:2911655-2911674 MS.gene050501:CDS 40.0%
GAACATCGTATAGGAGTTGA+TGG - chr7.2:2908687-2908706 None:intergenic 40.0%
GAAGAGGTTTGCAAAAGAGT+TGG + chr7.2:2911811-2911830 MS.gene050501:CDS 40.0%
GAGACAATTCATGACTGCAT+GGG + chr7.2:2911037-2911056 MS.gene050501:CDS 40.0%
GGCCGATCTTATGGTTATTA+AGG + chr7.2:2911571-2911590 MS.gene050501:intron 40.0%
GGGCGTGATGTTACATAATT+TGG - chr7.2:2909344-2909363 None:intergenic 40.0%
GTGGAATAGGGAGATTCTAA+TGG + chr7.2:2911103-2911122 MS.gene050501:CDS 40.0%
GTTAACAATTCGCCACTTGT+TGG + chr7.2:2911413-2911432 MS.gene050501:intron 40.0%
TATTGTATGAGCATCCGGTA+CGG - chr7.2:2910114-2910133 None:intergenic 40.0%
TCAGAAGTGAATTTCGGATG+GGG + chr7.2:2911656-2911675 MS.gene050501:CDS 40.0%
TCCATTTGCGGGAAGAATTA+GGG + chr7.2:2908540-2908559 MS.gene050501:CDS 40.0%
TCTCAGAAGTGAATTTCGGA+TGG + chr7.2:2911654-2911673 MS.gene050501:CDS 40.0%
TCTTCAGAGGGCAAACAAAT+TGG - chr7.2:2911788-2911807 None:intergenic 40.0%
TGAACCTGTATCTGTCGAAT+GGG - chr7.2:2908736-2908755 None:intergenic 40.0%
TGAAGCGATAAGATCGAATG+TGG - chr7.2:2911300-2911319 None:intergenic 40.0%
TGAATTTCGGATGGGGTAAA+GGG + chr7.2:2911663-2911682 MS.gene050501:CDS 40.0%
TGAGACAATTCATGACTGCA+TGG + chr7.2:2911036-2911055 MS.gene050501:CDS 40.0%
TTGAACCTGTATCTGTCGAA+TGG - chr7.2:2908737-2908756 None:intergenic 40.0%
! AAGCTTTGTGGAAACCCATT+TGG + chr7.2:2911485-2911504 MS.gene050501:CDS 40.0%
! ACGAGTATTGTATGAGCATC+CGG - chr7.2:2910119-2910138 None:intergenic 40.0%
! CAAGAAGGTATGCGTTTCAA+TGG + chr7.2:2908418-2908437 MS.gene050501:CDS 40.0%
! CTTTCTCTACCATTGATGGT+TGG - chr7.2:2908468-2908487 None:intergenic 40.0%
! GTACTGATGTGATTGAAGCT+TGG - chr7.2:2909602-2909621 None:intergenic 40.0%
! TCGCCACTTGTTGGATATTA+CGG + chr7.2:2911422-2911441 MS.gene050501:intron 40.0%
!! AAGTTGATGGTGGATTGTAC+CGG + chr7.2:2908577-2908596 MS.gene050501:CDS 40.0%
!! AGTTGATGGAAGCAATGGAA+TGG - chr7.2:2908673-2908692 None:intergenic 40.0%
!! ATAGGAGTTGATGGAAGCAA+TGG - chr7.2:2908678-2908697 None:intergenic 40.0%
!! ATCACAAAACTAGGAGCACT+CGG - chr7.2:2911869-2911888 None:intergenic 40.0%
!! CACAAAAGCATTGCAGTTAG+AGG + chr7.2:2911337-2911356 MS.gene050501:CDS 40.0%
!! GGGATCTATTGACTTTGAGT+TGG - chr7.2:2909390-2909409 None:intergenic 40.0%
!! TCGATAATTTGTTCTGAGCC+TGG - chr7.2:2908709-2908728 None:intergenic 40.0%
!!! CACTCGGTGTAAGATGATTT+TGG - chr7.2:2911853-2911872 None:intergenic 40.0%
AGAATCTCCCTATTCCACAC+AGG - chr7.2:2911101-2911120 None:intergenic 45.0%
AGATGGTTGCATGTAATGCG+TGG - chr7.2:2911140-2911159 None:intergenic 45.0%
AGTGCTCCTCTTCATGTCTT+AGG + chr7.2:2910001-2910020 MS.gene050501:intron 45.0%
ATTGTATGAGCATCCGGTAC+GGG - chr7.2:2910113-2910132 None:intergenic 45.0%
ATTTGCGGGAAGAATTAGGG+AGG + chr7.2:2908543-2908562 MS.gene050501:CDS 45.0%
CAACTCCTATACGATGTTCC+AGG + chr7.2:2908688-2908707 MS.gene050501:CDS 45.0%
CCATTCAACCTGTGTGGAAT+AGG + chr7.2:2911090-2911109 MS.gene050501:CDS 45.0%
CTATCGTCACCAACCATCAA+TGG + chr7.2:2908456-2908475 MS.gene050501:CDS 45.0%
CTCACTCCTAAGACATGAAG+AGG - chr7.2:2910010-2910029 None:intergenic 45.0%
GAAGAATTAGGGAGGGTGAT+GGG + chr7.2:2908551-2908570 MS.gene050501:CDS 45.0%
GAATTTCGGATGGGGTAAAG+GGG + chr7.2:2911664-2911683 MS.gene050501:CDS 45.0%
GGGTCTTTCTCTACCATTGA+TGG - chr7.2:2908472-2908491 None:intergenic 45.0%
GGTAGAGAAAGACCCTGTTA+AGG + chr7.2:2908477-2908496 MS.gene050501:CDS 45.0%
GGTTCATAGTGGCCATGAAT+TGG + chr7.2:2910985-2911004 MS.gene050501:CDS 45.0%
GTACCGTATCCACTACGTTA+CGG - chr7.2:2910660-2910679 None:intergenic 45.0%
GTGAATTTCGGATGGGGTAA+AGG + chr7.2:2911662-2911681 MS.gene050501:CDS 45.0%
TACCGTATCCACTACGTTAC+GGG - chr7.2:2910659-2910678 None:intergenic 45.0%
TCCCTAATTCTTCCCGCAAA+TGG - chr7.2:2908544-2908563 None:intergenic 45.0%
TGATGGAAGCAATGGAATGG+AGG - chr7.2:2908670-2908689 None:intergenic 45.0%
TTTGCGGGAAGAATTAGGGA+GGG + chr7.2:2908544-2908563 MS.gene050501:CDS 45.0%
! AAACGATAAAGCACCCGTAC+CGG + chr7.2:2910097-2910116 MS.gene050501:intron 45.0%
! AACTGTTTTGCTTACCCAGC+TGG + chr7.2:2911446-2911465 MS.gene050501:intron 45.0%
! ATGGTGGAGTTGCAAAAGGT+GGG + chr7.2:2911690-2911709 MS.gene050501:CDS 45.0%
! CCTATTCCACACAGGTTGAA+TGG - chr7.2:2911093-2911112 None:intergenic 45.0%
! GTGCATTGACGAAGGTGAAA+TGG - chr7.2:2911278-2911297 None:intergenic 45.0%
! GTGTATGGTGGAGTTGCAAA+AGG + chr7.2:2911686-2911705 MS.gene050501:CDS 45.0%
! TATGGTGGAGTTGCAAAAGG+TGG + chr7.2:2911689-2911708 MS.gene050501:CDS 45.0%
! TCTCAGATTTGACTCGTGCT+AGG + chr7.2:2911630-2911649 MS.gene050501:CDS 45.0%
! TGCCCTCTGAAGATATGAAG+AGG + chr7.2:2911795-2911814 MS.gene050501:CDS 45.0%
! TTCCACACAGGTTGAATGGA+AGG - chr7.2:2911089-2911108 None:intergenic 45.0%
!! TACCCGTAACGTAGTGGATA+CGG + chr7.2:2910654-2910673 MS.gene050501:intron 45.0%
CAGCTGCATCACCCATTGTA+TGG - chr7.2:2911013-2911032 None:intergenic 50.0%
CATACAATGGGTGATGCAGC+TGG + chr7.2:2911011-2911030 MS.gene050501:CDS 50.0%
CATAGCTGCTCTTCGTCTCT+TGG + chr7.2:2911250-2911269 MS.gene050501:CDS 50.0%
CATGACTGCATGGGCAGAAA+TGG + chr7.2:2911046-2911065 MS.gene050501:CDS 50.0%
CCTGTATCTGTCGAATGGGA+CGG - chr7.2:2908732-2908751 None:intergenic 50.0%
CTGAGCCTGGAACATCGTAT+AGG - chr7.2:2908696-2908715 None:intergenic 50.0%
GCAGTTAGAGGCAGATGAAG+AGG + chr7.2:2911349-2911368 MS.gene050501:CDS 50.0%
GCATTCTGTGGCCGATCTTA+TGG + chr7.2:2911562-2911581 MS.gene050501:intron 50.0%
GGAAGAATTAGGGAGGGTGA+TGG + chr7.2:2908550-2908569 MS.gene050501:CDS 50.0%
GGTTGCATGTAATGCGTGGA+GGG - chr7.2:2911136-2911155 None:intergenic 50.0%
GTCCTTCCATTCAACCTGTG+TGG + chr7.2:2911084-2911103 MS.gene050501:CDS 50.0%
TCACACGTCTCAAGTGTGGT+GGG + chr7.2:2910964-2910983 MS.gene050501:CDS 50.0%
TGGTGGAGTTGCAAAAGGTG+GGG + chr7.2:2911691-2911710 MS.gene050501:CDS 50.0%
TGGTTGCATGTAATGCGTGG+AGG - chr7.2:2911137-2911156 None:intergenic 50.0%
! CGAATGTGGTGCATTGACGA+AGG - chr7.2:2911286-2911305 None:intergenic 50.0%
!! ATGGTGGATTGTACCGGTGA+AGG + chr7.2:2908583-2908602 MS.gene050501:CDS 50.0%
!! CAAGTGTGGTGGGTTCATAG+TGG + chr7.2:2910974-2910993 MS.gene050501:CDS 50.0%
!! GGGACGATATAGGTTGATCC+AGG - chr7.2:2911728-2911747 None:intergenic 50.0%
ACCACTGCAGCGAAGCTTTG+TGG + chr7.2:2911473-2911492 MS.gene050501:CDS 55.0%
CAGGTCACACGTCTCAAGTG+TGG + chr7.2:2910960-2910979 MS.gene050501:intron 55.0%
CCGTCCCATTCGACAGATAC+AGG + chr7.2:2908729-2908748 MS.gene050501:CDS 55.0%
GTACGGTACCCGTAACGTAG+TGG + chr7.2:2910648-2910667 MS.gene050501:intron 55.0%
GTCACACGTCTCAAGTGTGG+TGG + chr7.2:2910963-2910982 MS.gene050501:CDS 55.0%
TCCACAAAGCTTCGCTGCAG+TGG - chr7.2:2911477-2911496 None:intergenic 55.0%
! GGATGGGGTAAAGGGGTGTA+TGG + chr7.2:2911671-2911690 MS.gene050501:CDS 55.0%
! TGGGGTAAAGGGGTGTATGG+TGG + chr7.2:2911674-2911693 MS.gene050501:CDS 55.0%
!! TGATGGGCGCAAGTTGATGG+TGG + chr7.2:2908567-2908586 MS.gene050501:CDS 55.0%
CTGGTGGCACCAACTCTGGT+TGG - chr7.2:2908351-2908370 None:intergenic 60.0%
GAGTCGTCAATGCACGCTCG+AGG + chr7.2:2911384-2911403 MS.gene050501:intron 60.0%
GCATGGGCAGAAATGGCTCG+AGG + chr7.2:2911053-2911072 MS.gene050501:CDS 60.0%
GGAGTTGCAAAAGGTGGGGC+TGG + chr7.2:2911695-2911714 MS.gene050501:CDS 60.0%
TCACAAGGAGTGGGTGCAGC+TGG - chr7.2:2908370-2908389 None:intergenic 60.0%
! GGTGGGGCTGGAACTTTTCC+TGG + chr7.2:2911707-2911726 MS.gene050501:CDS 60.0%
!! GGGTGATGGGCGCAAGTTGA+TGG + chr7.2:2908564-2908583 MS.gene050501:CDS 60.0%
CAAGGAGTGGGTGCAGCTGG+TGG - chr7.2:2908367-2908386 None:intergenic 65.0%
GCAGCTGGTGGCACCAACTC+TGG - chr7.2:2908355-2908374 None:intergenic 65.0%
! CTGCAGTGGTGACGCCAGCT+GGG - chr7.2:2911463-2911482 None:intergenic 65.0%
!! GCGGAGGTGCCAACCAGAGT+TGG + chr7.2:2908339-2908358 MS.gene050501:CDS 65.0%
! GCTGCAGTGGTGACGCCAGC+TGG - chr7.2:2911464-2911483 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 2908328 2911901 2908328 ID=MS.gene050501
chr7.2 mRNA 2908328 2911901 2908328 ID=MS.gene050501.t1;Parent=MS.gene050501
chr7.2 exon 2908328 2908750 2908328 ID=MS.gene050501.t1.exon1;Parent=MS.gene050501.t1
chr7.2 CDS 2908328 2908750 2908328 ID=cds.MS.gene050501.t1;Parent=MS.gene050501.t1
chr7.2 exon 2910963 2911370 2910963 ID=MS.gene050501.t1.exon2;Parent=MS.gene050501.t1
chr7.2 CDS 2910963 2911370 2910963 ID=cds.MS.gene050501.t1;Parent=MS.gene050501.t1
chr7.2 exon 2911465 2911523 2911465 ID=MS.gene050501.t1.exon3;Parent=MS.gene050501.t1
chr7.2 CDS 2911465 2911523 2911465 ID=cds.MS.gene050501.t1;Parent=MS.gene050501.t1
chr7.2 exon 2911619 2911901 2911619 ID=MS.gene050501.t1.exon4;Parent=MS.gene050501.t1
chr7.2 CDS 2911619 2911901 2911619 ID=cds.MS.gene050501.t1;Parent=MS.gene050501.t1
Gene Sequence

>MS.gene050501

ATGTTCACAGTGCGGAGGTGCCAACCAGAGTTGGTGCCACCAGCTGCACCCACTCCTTGTGAAGTTAAACTATTATCTGACATAGATGATCAAGAAGGTATGCGTTTCAATGGTCCTGTCATATTTATCTATCGTCACCAACCATCAATGGTAGAGAAAGACCCTGTTAAGGTTCTTAAATGTGCACTCTCAAAAACACTTGTTTATTACTATCCATTTGCGGGAAGAATTAGGGAGGGTGATGGGCGCAAGTTGATGGTGGATTGTACCGGTGAAGGTGTCATGTTCATTGAAGCTGAAGCTGATGTAACACTTGATCAGTTTGGTGATGCTCTACATCCTCCATTCCATTGCTTCCATCAACTCCTATACGATGTTCCAGGCTCAGAACAAATTATCGACCGTCCCATTCGACAGATACAGGTTCAATTATATTAATTATAAGTTTTTTTTTCACAAAAATAAACAATATTCATTCATTCATAATTAACGACAGAGTACGTCGATACAATATAAATCAAAAGTTGCTAAAAACAAAAAAGAGGAATCTGCGAACAAACTCACGATATCTATGTTAATAGCATAAAATGACAGAGTACATATGCCTACAAATATGACTATATTTAAGAATATTCATGTTTTCAAATCTGCAACGTAGATGACGTAAAATTCATCGAGAGGTTTTACATATCAACCTCGATTTTTACTATTTTTTTCCATATATATTTTTTTAGAGTTTTTTCCATGAAGTCATGTGCATAGAAAAAAAAAATCCAAAGTTATCTATATGATTGAAAAGATTCCATCATTTTTTTTTAGAGAAACATACTTATAACTTTTCATTCAAGATGTATTCAATACAATTTGGTATTTTAACCAAAATCTAAAAATTAGCTAATAATGAGGTTGCTGTATCTAAATGATGAACAACCTCATTTGCTTGTCTCTACAAACTCAACACTTGAGTTTCATAAAATTTCTTGAAGAGAGTTTTACAATTTTGAATAATAATTCCAAATTATGTAACATCACGCCCATGTGATAAAAAAATCTTCGCATCCAACTCAAAGTCAATAGATCCCAAATTAAGCTCATGAACTCATTCCAACGTTGAAAATAAACGAGTTTCTTCAATATGTACTTCACAAATTGGACTAAACCACTAAGTTTTTGCAAGGAAAAAAACACTATGTTTGTCTCTAATACACATACATATTCTAACCTTATTAAATTGTTTTGAAAAGGAAGCATCAATGTTGCATTTGTATCATCCAAGCTTCAATCACATCAGTACAATATTATGAGAAAGTTGAAAAATATTTTTTGACAAGGACTTAAAACATATATACTCAAAAAAAAAAGGACTTAAAACATATAAACTCTTAAAAACAAATTGATATCCAATTTTATGGTATTTGAATAAAAAAAAAGAGCTTTTGTATAATCATTTTTTCTACTAATTTTAATTTACTCTCCATTAACGTTTTTATATTTACAGTTGTTATTCTTTATCTAATCAAATTATAGGAAAAAACGGGAATGTATTATGAAAAATATTAACATTAGACAAATATATGCACTAAAATAATATACACGTACGAGAGTTTGAGAAAAACAAACACACAAACATTAACTTATTGATCTGGTGATGTTGATTTAGGATCTTGGAGTGAAGTGCTCCTCTTCATGTCTTAGGAGTGAGTTAAAAACCTCTTTTATAATTAGGGTTCGAATTTTAATGTCCAAACTCTGAAGCATACGTACTTCTAAAACGATAAAGCACCCGTACCGGATGCTCATACAATACTCGTGATACTGTTTTTGCTCAGTATTGTATTGTGAGTGAAATTTGTGACATTCTCTTATATAATAATATGATAATATAATATTATTTGTGAATTTGAGTTTCTTTGTCGTTGTAACCAACTCTAATCTTATCTTTTATTGTGATTTTGTTATTGTGAATTGAAGAATATATATTTTCATGTTATCTATACTATATATAAAGAAAATATATGGTTTTTGGTTGACTTTTTCATTTCCAATTATGCTATTAAACTTTGATTATAAGAATAATGTTATTTTGGTGCTGTTATTCAAAAAATAAGATTTGTTATATTGTTGTTATCATTGAAAAATATAAGTATAGTTTGTTAGGATACAAGTGCAAAATATATTACTATACCTATAATTTAATCAAAATCAAAATAATTTTAATCAAAATTTTATTAAAAACATTTTTCATAATTTATACGCATTAACGCAATAAAAAAAAGCGGACGGTGGATACCTTACTTTTTTTAAAAATTGACGTATTTTCGTACGGTACCCGTAACGTAGTGGATACGGTACTGTACCAATATGCAACATAGGTCCAAACCCTATATTTCACATGCTTTAAACACCAATATATTATAATCAGATTGACCCATTTAAAAAGTTTTGCCCTTATATGCACTTACCTTATTTCCATGCTCCATTTGAAGAAAACATATGAATTCTTACAGTTTCAAACAATTACTTGAATTTTGTACATGTTAGTGTTAATTACATATGCCAAACCGAATTGATTACAAGTTTACAACATGCATAGATAGATATATCTTTACTTAATATTATATTTATATTATGACAGGTCACACGTCTCAAGTGTGGTGGGTTCATAGTGGCCATGAATTGGAACCATACAATGGGTGATGCAGCTGGTTTGAGACAATTCATGACTGCATGGGCAGAAATGGCTCGAGGAGCACATCGTCCTTCCATTCAACCTGTGTGGAATAGGGAGATTCTAATGGCAAGAGACCCTCCACGCATTACATGCAACCATCTTGAATACGAACAATTTTTTTCGCCAAATACCATTAAGGAAGAAGATACTGCTTCTCTAGTCCATCGATCTTTCTTCTTTAGAGCTTCTGACATAGCTGCTCTTCGTCTCTTGGTTCCATTTCACCTTCGTCAATGCACCACATTCGATCTTATCGCTTCATGTTTTTGGTGTTGTCGCACAAAAGCATTGCAGTTAGAGGCAGATGAAGAGGTACGAATGATGTGAGTCGTCAATGCACGCTCGAGGTTTAACGTTAACAATTCGCCACTTGTTGGATATTACGGTAACTGTTTTGCTTACCCAGCTGGCGTCACCACTGCAGCGAAGCTTTGTGGAAACCCATTTGGTTATGCAGTGGAGTTGGTAAGAAAATTAAAAGCTGAAGTTACAGAGGAATACATGCATTCTGTGGCCGATCTTATGGTTATTAAGGAACGGTGTTTATTTACAACTGTAAGGTCTTGTGTTATCTCAGATTTGACTCGTGCTAGGCTCTCAGAAGTGAATTTCGGATGGGGTAAAGGGGTGTATGGTGGAGTTGCAAAAGGTGGGGCTGGAACTTTTCCTGGATCAACCTATATCGTCCCACATAAGAATATAAATGGAGAAGAAACTTTGATGTTACCAATTTGTTTGCCCTCTGAAGATATGAAGAGGTTTGCAAAAGAGTTGGATGAGATGCTTGGTAACCAAAATCATCTTACACCGAGTGCTCCTAGTTTTGTGATGTCTACCTTATAG
Protein sequence

>MS.gene050501.t1

MFTVRRCQPELVPPAAPTPCEVKLLSDIDDQEGMRFNGPVIFIYRHQPSMVEKDPVKVLKCALSKTLVYYYPFAGRIREGDGRKLMVDCTGEGVMFIEAEADVTLDQFGDALHPPFHCFHQLLYDVPGSEQIIDRPIRQIQVTRLKCGGFIVAMNWNHTMGDAAGLRQFMTAWAEMARGAHRPSIQPVWNREILMARDPPRITCNHLEYEQFFSPNTIKEEDTASLVHRSFFFRASDIAALRLLVPFHLRQCTTFDLIASCFWCCRTKALQLEADEELASPLQRSFVETHLVMQWSWSCVISDLTRARLSEVNFGWGKGVYGGVAKGGAGTFPGSTYIVPHKNINGEETLMLPICLPSEDMKRFAKELDEMLGNQNHLTPSAPSFVMSTL