Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05155.t1 | RHN52491.1 | 95.8 | 862 | 21 | 2 | 1 | 847 | 1 | 862 | 0.00E+00 | 1649 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05155.t1 | Q9FX32 | 71.1 | 819 | 221 | 2 | 1 | 805 | 1 | 817 | 0.0e+00 | 1191.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05155.t1 | A0A396HIZ4 | 95.8 | 862 | 21 | 2 | 1 | 847 | 1 | 862 | 0.0e+00 | 1649.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05150 | MS.gene05155 | 0.841227 | 5.40E-58 | -1.69E-46 |
MS.gene05155 | MS.gene05458 | 0.80495 | 1.69E-49 | -1.69E-46 |
MS.gene05155 | MS.gene072116 | 0.801206 | 1.00E-48 | -1.69E-46 |
MS.gene05155 | MS.gene21826 | 0.816085 | 6.63E-52 | -1.69E-46 |
MS.gene05155 | MS.gene24103 | 0.823975 | 1.04E-53 | -1.69E-46 |
MS.gene05155 | MS.gene26380 | 0.805526 | 1.28E-49 | -1.69E-46 |
MS.gene05155 | MS.gene31433 | 0.801226 | 9.95E-49 | -1.69E-46 |
MS.gene05155 | MS.gene35631 | 0.803723 | 3.04E-49 | -1.69E-46 |
MS.gene05155 | MS.gene37852 | 0.807636 | 4.59E-50 | -1.69E-46 |
MS.gene05155 | MS.gene41757 | 0.80888 | 2.49E-50 | -1.69E-46 |
MS.gene05155 | MS.gene42496 | 0.829132 | 6.11E-55 | -1.69E-46 |
MS.gene05155 | MS.gene45624 | 0.801235 | 9.91E-49 | -1.69E-46 |
MS.gene05155 | MS.gene49467 | 0.807766 | 4.31E-50 | -1.69E-46 |
MS.gene05155 | MS.gene65172 | 0.815816 | 7.61E-52 | -1.69E-46 |
MS.gene05155 | MS.gene84454 | 0.802669 | 5.03E-49 | -1.69E-46 |
MS.gene05155 | MS.gene91114 | 0.804342 | 2.26E-49 | -1.69E-46 |
MS.gene05155 | MS.gene95562 | 0.824617 | 7.33E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05155.t1 | MTR_6g478000 | 89.741 | 848 | 30 | 5 | 1 | 847 | 1 | 792 | 0.0 | 1548 |
MS.gene05155.t1 | MTR_5g076830 | 71.429 | 826 | 221 | 2 | 6 | 817 | 4 | 828 | 0.0 | 1267 |
MS.gene05155.t1 | MTR_6g478030 | 95.375 | 627 | 15 | 1 | 132 | 744 | 894 | 1520 | 0.0 | 1241 |
MS.gene05155.t1 | MTR_3g064610 | 69.639 | 830 | 234 | 3 | 5 | 816 | 3 | 832 | 0.0 | 1236 |
MS.gene05155.t1 | MTR_4g124660 | 54.467 | 806 | 347 | 5 | 5 | 795 | 2 | 802 | 0.0 | 920 |
MS.gene05155.t1 | MTR_7g108930 | 55.306 | 801 | 340 | 3 | 11 | 797 | 9 | 805 | 0.0 | 916 |
MS.gene05155.t1 | MTR_2g044070 | 53.731 | 804 | 352 | 5 | 7 | 795 | 2 | 800 | 0.0 | 915 |
MS.gene05155.t1 | MTR_1g088170 | 54.591 | 795 | 346 | 2 | 9 | 789 | 7 | 800 | 0.0 | 904 |
MS.gene05155.t1 | MTR_4g124660 | 55.378 | 753 | 316 | 5 | 5 | 742 | 2 | 749 | 0.0 | 862 |
MS.gene05155.t1 | MTR_6g478020 | 94.954 | 218 | 6 | 2 | 635 | 847 | 12 | 229 | 4.22e-137 | 439 |
MS.gene05155.t1 | MTR_0277s0020 | 77.523 | 218 | 12 | 3 | 635 | 847 | 1162 | 1347 | 1.68e-97 | 333 |
MS.gene05155.t1 | MTR_0277s0030 | 85.455 | 110 | 11 | 2 | 743 | 847 | 65 | 174 | 3.45e-54 | 187 |
MS.gene05155.t1 | MTR_0277s0030 | 96.226 | 53 | 2 | 0 | 582 | 634 | 1 | 53 | 9.92e-26 | 106 |
MS.gene05155.t1 | MTR_0419s0050 | 65.517 | 145 | 4 | 2 | 582 | 726 | 1 | 99 | 1.06e-52 | 179 |
MS.gene05155.t1 | MTR_0419s0010 | 62.136 | 103 | 4 | 1 | 687 | 789 | 2 | 69 | 1.41e-33 | 124 |
MS.gene05155.t1 | MTR_5g091340 | 26.397 | 519 | 311 | 20 | 285 | 743 | 171 | 678 | 1.53e-32 | 136 |
MS.gene05155.t1 | MTR_3g047380 | 24.811 | 528 | 305 | 18 | 285 | 743 | 167 | 671 | 4.74e-32 | 135 |
MS.gene05155.t1 | MTR_4g115620 | 25.217 | 575 | 333 | 21 | 265 | 765 | 125 | 676 | 1.00e-31 | 134 |
MS.gene05155.t1 | MTR_0419s0020 | 87.500 | 48 | 6 | 0 | 800 | 847 | 17 | 64 | 4.46e-20 | 86.3 |
MS.gene05155.t1 | MTR_6g081130 | 78.571 | 56 | 8 | 1 | 797 | 848 | 14 | 69 | 2.85e-19 | 84.7 |
MS.gene05155.t1 | MTR_0419s0060 | 80.769 | 52 | 6 | 1 | 800 | 847 | 17 | 68 | 2.12e-18 | 80.5 |
MS.gene05155.t1 | MTR_4g021160 | 35.616 | 73 | 46 | 1 | 3 | 74 | 4 | 76 | 6.63e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05155.t1 | AT1G73370 | 71.062 | 819 | 221 | 2 | 1 | 805 | 1 | 817 | 0.0 | 1242 |
MS.gene05155.t1 | AT1G73370 | 71.062 | 819 | 221 | 2 | 1 | 805 | 1 | 817 | 0.0 | 1242 |
MS.gene05155.t1 | AT1G73370 | 71.484 | 775 | 205 | 2 | 45 | 805 | 1 | 773 | 0.0 | 1178 |
MS.gene05155.t1 | AT5G37180 | 67.419 | 798 | 243 | 2 | 12 | 795 | 5 | 799 | 0.0 | 1150 |
MS.gene05155.t1 | AT5G37180 | 73.159 | 611 | 150 | 1 | 199 | 795 | 1 | 611 | 0.0 | 954 |
MS.gene05155.t1 | AT4G02280 | 55.250 | 800 | 343 | 2 | 9 | 794 | 6 | 804 | 0.0 | 932 |
MS.gene05155.t1 | AT5G49190 | 54.318 | 799 | 350 | 2 | 11 | 795 | 5 | 802 | 0.0 | 910 |
MS.gene05155.t1 | AT5G49190 | 55.412 | 776 | 331 | 2 | 34 | 795 | 18 | 792 | 0.0 | 904 |
MS.gene05155.t1 | AT5G20830 | 53.580 | 810 | 356 | 5 | 3 | 797 | 2 | 806 | 0.0 | 892 |
MS.gene05155.t1 | AT5G20830 | 53.580 | 810 | 356 | 5 | 3 | 797 | 2 | 806 | 0.0 | 892 |
MS.gene05155.t1 | AT5G20830 | 53.580 | 810 | 356 | 5 | 3 | 797 | 2 | 806 | 0.0 | 892 |
MS.gene05155.t1 | AT5G49190 | 57.143 | 735 | 300 | 2 | 75 | 795 | 3 | 736 | 0.0 | 890 |
MS.gene05155.t1 | AT3G43190 | 53.465 | 808 | 356 | 5 | 3 | 795 | 2 | 804 | 0.0 | 889 |
MS.gene05155.t1 | AT3G43190 | 53.465 | 808 | 356 | 5 | 3 | 795 | 2 | 804 | 0.0 | 889 |
MS.gene05155.t1 | AT5G37180 | 74.684 | 553 | 126 | 1 | 257 | 795 | 1 | 553 | 0.0 | 885 |
MS.gene05155.t1 | AT4G10120 | 25.472 | 530 | 300 | 19 | 285 | 755 | 23 | 516 | 2.00e-32 | 135 |
MS.gene05155.t1 | AT4G10120 | 25.472 | 530 | 300 | 19 | 285 | 755 | 197 | 690 | 2.65e-32 | 135 |
MS.gene05155.t1 | AT4G10120 | 25.472 | 530 | 300 | 19 | 285 | 755 | 197 | 690 | 2.65e-32 | 135 |
MS.gene05155.t1 | AT4G10120 | 25.472 | 530 | 300 | 19 | 285 | 755 | 197 | 690 | 2.65e-32 | 135 |
MS.gene05155.t1 | AT1G04920 | 25.830 | 542 | 314 | 21 | 281 | 753 | 168 | 690 | 2.69e-32 | 135 |
MS.gene05155.t1 | AT4G10120 | 24.951 | 509 | 289 | 17 | 304 | 755 | 17 | 489 | 6.68e-31 | 130 |
MS.gene05155.t1 | AT5G11110 | 24.581 | 537 | 323 | 19 | 285 | 769 | 177 | 683 | 1.46e-30 | 130 |
MS.gene05155.t1 | AT5G20280 | 25.047 | 535 | 326 | 17 | 281 | 764 | 166 | 676 | 2.75e-30 | 129 |
Find 164 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGAACATGGGATCAATTTA+TGG | 0.166540 | 6.4:+51530080 | MS.gene05155:CDS |
TGGGATCAATTTATGGGTTT+TGG | 0.205721 | 6.4:+51530087 | MS.gene05155:CDS |
CTTGCCATTGAGAAGATTAT+AGG | 0.209492 | 6.4:-51529293 | None:intergenic |
ACCAAGTTTAGAAGCTATTA+AGG | 0.217800 | 6.4:-51528007 | None:intergenic |
TGTTAGCTTAGATTCAATTT+TGG | 0.228497 | 6.4:-51530681 | None:intergenic |
TACAAAGATTCTTGAACTTA+TGG | 0.238387 | 6.4:+51527930 | MS.gene05155:CDS |
TTACCTCTCCTTGATGATTA+AGG | 0.239757 | 6.4:-51526068 | None:intergenic |
TTGACATTGGTTGAGGTTCT+TGG | 0.240050 | 6.4:-51530562 | None:intergenic |
TTAGGCCAAATCCTGGTTTC+TGG | 0.242074 | 6.4:+51525197 | MS.gene05155:CDS |
ACATTCTTAGAGTCCCTTTC+TGG | 0.252632 | 6.4:+51527716 | MS.gene05155:CDS |
ATGAAGATTCAGACGCTAAA+TGG | 0.259942 | 6.4:+51528402 | MS.gene05155:CDS |
GGAAAACCTGACCTCATTAT+TGG | 0.261160 | 6.4:+51527955 | MS.gene05155:CDS |
TTTGGTCAAGCTGATGTTCT+AGG | 0.267299 | 6.4:+51526746 | MS.gene05155:CDS |
TCAACCTTCCAGCAATTTCT+TGG | 0.273129 | 6.4:-51528517 | None:intergenic |
ATGGCACTTTCATCTTCTAT+TGG | 0.281086 | 6.4:+51525955 | MS.gene05155:CDS |
GACATTATGTTCCAGTGTTC+AGG | 0.284963 | 6.4:-51529782 | None:intergenic |
AGCTGGAGATCCAATTAAAA+TGG | 0.287185 | 6.4:+51526661 | MS.gene05155:CDS |
TGATGATAGGTTCAAGTTCT+TGG | 0.298390 | 6.4:-51527678 | None:intergenic |
CCAGCATTGTATGAAGCTTT+TGG | 0.302612 | 6.4:+51529590 | MS.gene05155:CDS |
TGAGCAAATCGTTCTAAATA+AGG | 0.303719 | 6.4:-51527787 | None:intergenic |
TTTCATATTGATCCTCATAA+TGG | 0.327462 | 6.4:+51529707 | MS.gene05155:CDS |
TGATCAAGTAAGAGCATTAG+AGG | 0.327584 | 6.4:+51527345 | MS.gene05155:CDS |
GAATCTGAGGCTTCACATTA+AGG | 0.333564 | 6.4:-51527399 | None:intergenic |
TTCAATGCTTTCTGAAGCTT+TGG | 0.336752 | 6.4:-51526247 | None:intergenic |
TGAGGTTCTTGGGGTACCTT+AGG | 0.341726 | 6.4:-51530551 | None:intergenic |
CGGCTTTGTTTCAAGGCATC+AGG | 0.345200 | 6.4:-51524379 | None:intergenic |
TTCTCTATTCATGGATACTT+TGG | 0.345725 | 6.4:+51526728 | MS.gene05155:CDS |
TGGCAAAGCATTTCTTCATA+TGG | 0.350848 | 6.4:-51524405 | None:intergenic |
TTGGTAAATCTTGTAATTGT+TGG | 0.358781 | 6.4:+51529383 | MS.gene05155:CDS |
TAAAGTGAATGCAGATGATT+TGG | 0.361708 | 6.4:+51525228 | MS.gene05155:CDS |
TGACATTGGTTGAGGTTCTT+GGG | 0.367456 | 6.4:-51530561 | None:intergenic |
ATAACAATGTTGAACATGTT+TGG | 0.375732 | 6.4:-51526704 | None:intergenic |
CAGAGAATGGGGATTTGATA+AGG | 0.376461 | 6.4:+51526577 | MS.gene05155:CDS |
TGAAGAATTACTTTATAGTA+AGG | 0.377629 | 6.4:+51528830 | MS.gene05155:CDS |
GGCAACCATTGCTCATGCTT+TGG | 0.379572 | 6.4:+51528367 | MS.gene05155:intron |
TGAAACAGGTTGGTTGCAAA+TGG | 0.380181 | 6.4:+51525019 | MS.gene05155:intron |
TGAACATGGGATCAATTTAT+GGG | 0.383409 | 6.4:+51530081 | MS.gene05155:CDS |
ATGGAAACGGCTTTGTTTCA+AGG | 0.384267 | 6.4:-51524386 | None:intergenic |
TCCTTAATAGCTTCTAAACT+TGG | 0.390784 | 6.4:+51528006 | MS.gene05155:CDS |
CCTTGATTTGTTGCAAAAGT+TGG | 0.402280 | 6.4:-51529647 | None:intergenic |
CTTTGCTTCTTCTCAGTGAA+AGG | 0.403582 | 6.4:-51528783 | None:intergenic |
TGATTTCACCACACCTCATA+TGG | 0.403948 | 6.4:+51525936 | MS.gene05155:CDS |
TATTCCCAGAAACCAGGATT+TGG | 0.403977 | 6.4:-51525202 | None:intergenic |
CGTCTGATACCGAATGCAAA+AGG | 0.405255 | 6.4:+51527643 | MS.gene05155:CDS |
TCTTGGGGTACCTTAGGAAT+TGG | 0.407309 | 6.4:-51530545 | None:intergenic |
AAAACCTGGCCTCCAGTGTC+TGG | 0.410753 | 6.4:-51526773 | None:intergenic |
CATTGCTTTGCAGGCAAGAA+AGG | 0.413703 | 6.4:+51530520 | MS.gene05155:intron |
ATTGATTCATCTCCATTATG+AGG | 0.417122 | 6.4:-51529719 | None:intergenic |
TAGGCCAAATCCTGGTTTCT+GGG | 0.422714 | 6.4:+51525198 | MS.gene05155:CDS |
ATCATTGTTGATGGTGTCTC+AGG | 0.423066 | 6.4:+51529683 | MS.gene05155:CDS |
CTTTCATCTTCTATTGGAAA+AGG | 0.424148 | 6.4:+51525961 | MS.gene05155:CDS |
TGGGTGGTAATGATGACAAC+TGG | 0.424364 | 6.4:-51530661 | None:intergenic |
TGTGAGCAGGTTCAGAGAAT+GGG | 0.425686 | 6.4:+51526565 | MS.gene05155:intron |
AGTGAGACTAAATAATATAA+TGG | 0.429417 | 6.4:+51525051 | MS.gene05155:CDS |
TTGTGAGCAGGTTCAGAGAA+TGG | 0.430758 | 6.4:+51526564 | MS.gene05155:intron |
AAATTATACTGATGGAAACT+TGG | 0.433245 | 6.4:+51527978 | MS.gene05155:CDS |
GCAGATGATTTGGAAGTAGA+TGG | 0.435227 | 6.4:+51525238 | MS.gene05155:CDS |
ACTATAAAGTAATTCTTCAA+TGG | 0.436376 | 6.4:-51528826 | None:intergenic |
AGAGAATGGGGATTTGATAA+GGG | 0.436493 | 6.4:+51526578 | MS.gene05155:CDS |
ATCGAAAGACAGAGAAGAAA+CGG | 0.446782 | 6.4:+51529427 | MS.gene05155:CDS |
GTAAATCTTGTAATTGTTGG+AGG | 0.448003 | 6.4:+51529386 | MS.gene05155:CDS |
AATGGGGATTTGATAAGGGG+TGG | 0.454037 | 6.4:+51526582 | MS.gene05155:CDS |
AACGACCTAGTTAGTGATTG+AGG | 0.456301 | 6.4:+51531119 | MS.gene05155:CDS |
TTTGCTGTTAGGCCAAATCC+TGG | 0.456686 | 6.4:+51525190 | MS.gene05155:CDS |
ATACTTGAAATACAAGGAAA+TGG | 0.459100 | 6.4:+51525276 | MS.gene05155:CDS |
ATTGCCAGACACTGGAGGCC+AGG | 0.463699 | 6.4:+51526769 | MS.gene05155:CDS |
GGAGCAGCAATGTTGAACTT+TGG | 0.467131 | 6.4:-51528735 | None:intergenic |
TTATTTAGAACGATTTGCTC+AGG | 0.470017 | 6.4:+51527789 | MS.gene05155:CDS |
TAAAGTAATTCTTCAATGGC+AGG | 0.470601 | 6.4:-51528822 | None:intergenic |
TAATTTCCAATAATGAGGTC+AGG | 0.474083 | 6.4:-51527961 | None:intergenic |
GGTTGGTTGCAAATGGGAAA+AGG | 0.475033 | 6.4:+51525026 | MS.gene05155:intron |
AGTACATACCAAGAAATTGC+TGG | 0.475992 | 6.4:+51528509 | MS.gene05155:CDS |
AGAAGGGAATTCTATCTCAA+TGG | 0.476149 | 6.4:+51527743 | MS.gene05155:CDS |
TAATCTTCAATTTAGGAACC+TGG | 0.478161 | 6.4:+51530166 | MS.gene05155:CDS |
AAGTTCAACATTGCTGCTCC+AGG | 0.484663 | 6.4:+51528738 | MS.gene05155:CDS |
AGCATTTCTTCATATGGAAA+CGG | 0.485069 | 6.4:-51524399 | None:intergenic |
TTTGCTTCTTCTCAGTGAAA+GGG | 0.494336 | 6.4:-51528782 | None:intergenic |
CTGCCTCCTGTGTACAACTT+AGG | 0.496308 | 6.4:-51525144 | None:intergenic |
TTCCCTTCTCTGTCCAGAAA+GGG | 0.498281 | 6.4:-51527729 | None:intergenic |
AAGGGGTGGGGAAACACTGC+AGG | 0.501630 | 6.4:+51526596 | MS.gene05155:CDS |
CACACTGCATTTACCATGCC+GGG | 0.502984 | 6.4:+51528675 | MS.gene05155:CDS |
GAAGGGAATTCTATCTCAAT+GGG | 0.503136 | 6.4:+51527744 | MS.gene05155:CDS |
CTTTCTGAGGTACTAGAAGC+TGG | 0.503695 | 6.4:+51526644 | MS.gene05155:CDS |
GGACTTTGTCGCGTAGTCTC+CGG | 0.504452 | 6.4:+51528696 | MS.gene05155:CDS |
ATTATTGGAAATTATACTGA+TGG | 0.504515 | 6.4:+51527970 | MS.gene05155:CDS |
TTGGCAGGTGTTGTTGACAT+TGG | 0.506583 | 6.4:-51530575 | None:intergenic |
TTCTAAACTTGGTGTAACTC+AGG | 0.509620 | 6.4:+51528017 | MS.gene05155:CDS |
ATATGAAGAAATGCTTTGCC+AGG | 0.509721 | 6.4:+51524407 | MS.gene05155:CDS |
ACGACCTAGTTAGTGATTGA+GGG | 0.512868 | 6.4:+51531120 | MS.gene05155:CDS |
GTCTGATACCGAATGCAAAA+GGG | 0.514506 | 6.4:+51527644 | MS.gene05155:CDS |
GAAACAGGTTGGTTGCAAAT+GGG | 0.514671 | 6.4:+51525020 | MS.gene05155:intron |
TTATTAAGCCTTAATCATCA+AGG | 0.516137 | 6.4:+51526060 | MS.gene05155:CDS |
AAGATTCTTGAACTTATGGA+TGG | 0.516719 | 6.4:+51527934 | MS.gene05155:CDS |
TAGACAGATTGATCAGCTCC+TGG | 0.517673 | 6.4:-51528756 | None:intergenic |
GTTGAACAAAGAACAAAAGT+TGG | 0.520029 | 6.4:+51530115 | MS.gene05155:CDS |
ATTCCCTTCTCTGTCCAGAA+AGG | 0.522424 | 6.4:-51527730 | None:intergenic |
CCAGCTGAAATCATTGTTGA+TGG | 0.526521 | 6.4:+51529674 | MS.gene05155:CDS |
GTGGGGAAACACTGCAGGAA+GGG | 0.527757 | 6.4:+51526601 | MS.gene05155:CDS |
TCTTCGCGAACCACTCGACT+AGG | 0.529092 | 6.4:-51529343 | None:intergenic |
TGGGGATTTGATAAGGGGTG+GGG | 0.530468 | 6.4:+51526584 | MS.gene05155:CDS |
TTGTGCTGCATCATGCCCCT+TGG | 0.530931 | 6.4:-51530615 | None:intergenic |
CCATCAACAATGATTTCAGC+TGG | 0.532974 | 6.4:-51529674 | None:intergenic |
GTCTTCAAAGAATCAATGAA+TGG | 0.533715 | 6.4:+51529813 | MS.gene05155:CDS |
GAAACCTATAATCTTCTCAA+TGG | 0.534665 | 6.4:+51529289 | MS.gene05155:CDS |
TTGTATTTCAAGTATTCTGA+AGG | 0.535677 | 6.4:-51525268 | None:intergenic |
ATGGGGATTTGATAAGGGGT+GGG | 0.535734 | 6.4:+51526583 | MS.gene05155:CDS |
CTCATCAGCAAGGATAGACC+AGG | 0.537358 | 6.4:+51528639 | MS.gene05155:intron |
GAAGATGAAAGTGCCATATG+AGG | 0.538755 | 6.4:-51525949 | None:intergenic |
AAGGACTTGACTTTACTACT+AGG | 0.539536 | 6.4:+51525980 | MS.gene05155:CDS |
TGGATCAAATACATTGATGC+CGG | 0.540309 | 6.4:-51528715 | None:intergenic |
CGATGTATAGCAGACACAAA+AGG | 0.541356 | 6.4:+51529554 | MS.gene05155:CDS |
GTTCTAGGATTGCCAGACAC+TGG | 0.541620 | 6.4:+51526761 | MS.gene05155:CDS |
CCAAAAGCTTCATACAATGC+TGG | 0.542812 | 6.4:-51529590 | None:intergenic |
AATGATGACAACTGGGTTTG+AGG | 0.543020 | 6.4:-51530653 | None:intergenic |
GGTGTTGTTGACATTGGTTG+AGG | 0.543252 | 6.4:-51530569 | None:intergenic |
GTCCCTTTCTGGACAGAGAA+GGG | 0.546251 | 6.4:+51527727 | MS.gene05155:CDS |
GACATTGGTTGAGGTTCTTG+GGG | 0.549444 | 6.4:-51530560 | None:intergenic |
ATGTCCCTCAATCACTAACT+AGG | 0.550103 | 6.4:-51531124 | None:intergenic |
GTGTGAGTTTCATATTGCCC+TGG | 0.551317 | 6.4:-51528657 | None:intergenic |
AAATAATATAATGGAAGATG+TGG | 0.551979 | 6.4:+51525060 | MS.gene05155:CDS |
AGTCCCTTTCTGGACAGAGA+AGG | 0.554342 | 6.4:+51527726 | MS.gene05155:CDS |
TCACACTGCATTTACCATGC+CGG | 0.555687 | 6.4:+51528674 | MS.gene05155:CDS |
AAAGCAGAAGCTACTTCCAA+GGG | 0.561938 | 6.4:+51530599 | MS.gene05155:CDS |
AAAAGCAGAAGCTACTTCCA+AGG | 0.562076 | 6.4:+51530598 | MS.gene05155:CDS |
TTCAATGGCAGGTTGAAAAG+TGG | 0.562146 | 6.4:-51528811 | None:intergenic |
CTTAATAAGTAATTAAGCAG+TGG | 0.562576 | 6.4:-51526045 | None:intergenic |
AAGAAAGGTACCAATTCCTA+AGG | 0.565800 | 6.4:+51530535 | MS.gene05155:CDS |
GAACAAGAGACTAAGAAGCT+TGG | 0.571888 | 6.4:+51529364 | MS.gene05155:CDS |
AAATGGTATTTGATGAGAAG+TGG | 0.572044 | 6.4:+51525293 | MS.gene05155:CDS |
CTATAATCTTCTCAATGGCA+AGG | 0.572371 | 6.4:+51529294 | MS.gene05155:CDS |
CAGTATAATTTCCAATAATG+AGG | 0.573217 | 6.4:-51527966 | None:intergenic |
TGGAACATAATGTCTAAAGC+TGG | 0.574022 | 6.4:+51529791 | MS.gene05155:CDS |
GAGACTACGCGACAAAGTCC+CGG | 0.574380 | 6.4:-51528693 | None:intergenic |
TGCAAACAAAGTGTTGAACA+TGG | 0.582568 | 6.4:+51530067 | MS.gene05155:CDS |
GTGAGCAGGTTCAGAGAATG+GGG | 0.582707 | 6.4:+51526566 | MS.gene05155:intron |
TTAACATATTCCCAGAAACC+AGG | 0.584706 | 6.4:-51525208 | None:intergenic |
GGTGGGGAAACACTGCAGGA+AGG | 0.587059 | 6.4:+51526600 | MS.gene05155:CDS |
CAAAGAACAAAAGTTGGCAA+AGG | 0.588238 | 6.4:+51530121 | MS.gene05155:CDS |
TTGAATCTAAGCTAACATCA+AGG | 0.597124 | 6.4:+51530687 | MS.gene05155:CDS |
GAGAATGGGGATTTGATAAG+GGG | 0.604476 | 6.4:+51526579 | MS.gene05155:CDS |
TTCAGAATACTTGAAATACA+AGG | 0.609609 | 6.4:+51525270 | MS.gene05155:CDS |
TGTGAAGCCTCAGATTCTTG+TGG | 0.617074 | 6.4:+51527405 | MS.gene05155:CDS |
TTTCTCCAAAGCATGAGCAA+TGG | 0.620352 | 6.4:-51528372 | None:intergenic |
TGAACTCTCACTCAATCTTG+AGG | 0.622142 | 6.4:-51526010 | None:intergenic |
CTGCAAAAGATTGAGTTGCA+AGG | 0.624139 | 6.4:+51527376 | MS.gene05155:CDS |
TAGCATACCACAAGAATCTG+AGG | 0.626563 | 6.4:-51527412 | None:intergenic |
GCAAGACTAATCCTGAACAC+TGG | 0.630017 | 6.4:+51529771 | MS.gene05155:CDS |
GTCATTGAGGCAATGAACTG+TGG | 0.630579 | 6.4:+51529620 | MS.gene05155:CDS |
AGGTCAGTTCAGATGGATTG+CGG | 0.634342 | 6.4:+51529496 | MS.gene05155:intron |
GCAAACAAAGTGTTGAACAT+GGG | 0.642748 | 6.4:+51530068 | MS.gene05155:CDS |
TACGCGACAAAGTCCCGGCA+TGG | 0.643567 | 6.4:-51528688 | None:intergenic |
ACATTAGCGGCCTAGTCGAG+TGG | 0.646877 | 6.4:+51529333 | MS.gene05155:CDS |
GACAATGAGAATGCTTTCTG+AGG | 0.650408 | 6.4:+51526631 | MS.gene05155:CDS |
CATCCTAAGTTGTACACAGG+AGG | 0.653499 | 6.4:+51525141 | MS.gene05155:CDS |
ACTAGTTATGATAAAATCAG+CGG | 0.654491 | 6.4:-51528489 | None:intergenic |
GGGTGGTAATGATGACAACT+GGG | 0.655065 | 6.4:-51530660 | None:intergenic |
AAGCCTTAATCATCAAGGAG+AGG | 0.663492 | 6.4:+51526065 | MS.gene05155:CDS |
CATACCAAGAAATTGCTGGA+AGG | 0.669178 | 6.4:+51528513 | MS.gene05155:CDS |
CTAGGATTGCCAGACACTGG+AGG | 0.672637 | 6.4:+51526764 | MS.gene05155:CDS |
ATACATCCTAAGTTGTACAC+AGG | 0.691450 | 6.4:+51525138 | MS.gene05155:CDS |
TGAAAGTGCCATATGAGGTG+TGG | 0.718654 | 6.4:-51525944 | None:intergenic |
CAAACTGATAGATATCGCAA+CGG | 0.722489 | 6.4:+51529521 | MS.gene05155:CDS |
TCATCAGCAAGGATAGACCA+GGG | 0.726103 | 6.4:+51528640 | MS.gene05155:intron |
AAGCAGAAGCTACTTCCAAG+GGG | 0.733208 | 6.4:+51530600 | MS.gene05155:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCATAATATAATATTTAG+GGG | - | chr6.4:51530845-51530864 | None:intergenic | 10.0% |
!! | ACAATCATAATATAATATTT+AGG | - | chr6.4:51530847-51530866 | None:intergenic | 10.0% |
!! | ATAATGAAAAAAAAATAGTA+AGG | - | chr6.4:51525843-51525862 | None:intergenic | 10.0% |
!! | CAATCATAATATAATATTTA+GGG | - | chr6.4:51530846-51530865 | None:intergenic | 10.0% |
!! | TAAAATATCATTATTATAGT+AGG | + | chr6.4:51524541-51524560 | MS.gene05155:intron | 10.0% |
!! | TAATGAAAAAAAAATAGTAA+GGG | - | chr6.4:51525842-51525861 | None:intergenic | 10.0% |
!! | TATTAAAACTAAAATATGTT+TGG | + | chr6.4:51529047-51529066 | MS.gene05155:intron | 10.0% |
!! | TATTATATTAACTGTTATAT+CGG | - | chr6.4:51528989-51529008 | None:intergenic | 10.0% |
!! | TTCAATTCTTATTATATTTA+AGG | - | chr6.4:51530483-51530502 | None:intergenic | 10.0% |
!! | TTTATTATTTATTTACAGAT+TGG | - | chr6.4:51524664-51524683 | None:intergenic | 10.0% |
!!! | ACATATTTTAGTTTTAATAA+TGG | - | chr6.4:51529046-51529065 | None:intergenic | 10.0% |
!!! | TGAATAATTTTTTCTTTATT+GGG | + | chr6.4:51527300-51527319 | MS.gene05155:intron | 10.0% |
!! | AAATTTAGTTATATTGAAGA+AGG | - | chr6.4:51527214-51527233 | None:intergenic | 15.0% |
!! | AATAAGAATTGAAAAGTTAT+GGG | + | chr6.4:51530490-51530509 | MS.gene05155:intron | 15.0% |
!! | AGTAGTTAGATAAATTAATA+TGG | - | chr6.4:51526825-51526844 | None:intergenic | 15.0% |
!! | ATTACACTTATTAATTATCA+AGG | + | chr6.4:51524494-51524513 | MS.gene05155:intron | 15.0% |
!! | GATAAATTAATATGGTATTT+AGG | - | chr6.4:51526817-51526836 | None:intergenic | 15.0% |
!! | TAAAAGCAAATATTCATTTA+GGG | - | chr6.4:51530774-51530793 | None:intergenic | 15.0% |
!! | TAACAAACAATATTATATGA+AGG | + | chr6.4:51524904-51524923 | MS.gene05155:intron | 15.0% |
!! | TAATAAGAATTGAAAAGTTA+TGG | + | chr6.4:51530489-51530508 | MS.gene05155:intron | 15.0% |
!! | TTAAAAGCAAATATTCATTT+AGG | - | chr6.4:51530775-51530794 | None:intergenic | 15.0% |
!! | TTTATGTAATATAATCATGA+AGG | + | chr6.4:51528594-51528613 | MS.gene05155:intron | 15.0% |
!! | TTTGAAAATGACAAATAAAT+CGG | + | chr6.4:51529898-51529917 | MS.gene05155:intron | 15.0% |
!!! | ATAAAATTTTCAAAACTGTA+CGG | + | chr6.4:51525543-51525562 | MS.gene05155:intron | 15.0% |
!!! | CTGAATAATTTTTTCTTTAT+TGG | + | chr6.4:51527299-51527318 | MS.gene05155:intron | 15.0% |
!!! | TGTTTTATAATCTTCAATTT+AGG | + | chr6.4:51530159-51530178 | MS.gene05155:CDS | 15.0% |
!!! | TTTTACGATATATAACAAAT+AGG | + | chr6.4:51530457-51530476 | MS.gene05155:intron | 15.0% |
!! | AACAAATAATATGAGACAAA+GGG | - | chr6.4:51524437-51524456 | None:intergenic | 20.0% |
!! | AATAATGTTTAAGAAAGCAA+AGG | - | chr6.4:51529095-51529114 | None:intergenic | 20.0% |
!! | AATATAAAATATGGAAGAGA+AGG | - | chr6.4:51527843-51527862 | None:intergenic | 20.0% |
!! | ACTATAAAGTAATTCTTCAA+TGG | - | chr6.4:51528829-51528848 | None:intergenic | 20.0% |
!! | AGTGAGACTAAATAATATAA+TGG | + | chr6.4:51525051-51525070 | MS.gene05155:CDS | 20.0% |
!! | ATAAAATAGTTGAAGGATTA+AGG | + | chr6.4:51528937-51528956 | MS.gene05155:intron | 20.0% |
!! | ATAATGTTTAAGAAAGCAAA+GGG | - | chr6.4:51529094-51529113 | None:intergenic | 20.0% |
!! | ATTATATAAGCACTTAATCA+AGG | - | chr6.4:51528061-51528080 | None:intergenic | 20.0% |
!! | ATTATTGGAAATTATACTGA+TGG | + | chr6.4:51527970-51527989 | MS.gene05155:CDS | 20.0% |
!! | ATTTATTTGACTCTTTGATA+AGG | + | chr6.4:51525707-51525726 | MS.gene05155:intron | 20.0% |
!! | ATTTGTAACAAACAGATAAA+CGG | - | chr6.4:51530231-51530250 | None:intergenic | 20.0% |
!! | TAAATGTATAGAATGAAAGT+TGG | + | chr6.4:51524706-51524725 | MS.gene05155:intron | 20.0% |
!! | TAACTTGATAAGAAAGTAAT+AGG | - | chr6.4:51528886-51528905 | None:intergenic | 20.0% |
!! | TAGTTTAACAAACATTCATA+TGG | + | chr6.4:51529987-51530006 | MS.gene05155:intron | 20.0% |
!! | TGAAGAATTACTTTATAGTA+AGG | + | chr6.4:51528830-51528849 | MS.gene05155:CDS | 20.0% |
!! | TTTATGGTTATGGATATTAT+CGG | + | chr6.4:51529847-51529866 | MS.gene05155:intron | 20.0% |
!! | TTTGGACTATAAACATATTA+TGG | + | chr6.4:51529065-51529084 | MS.gene05155:intron | 20.0% |
!!! | AAAAGTGATTCCATTTTAAT+TGG | - | chr6.4:51526674-51526693 | None:intergenic | 20.0% |
!!! | AAATAATATAATGGAAGATG+TGG | + | chr6.4:51525060-51525079 | MS.gene05155:CDS | 20.0% |
!!! | AATTTGTTTTGTAAATCTGA+GGG | - | chr6.4:51525418-51525437 | None:intergenic | 20.0% |
!!! | ATATTATGATTGTGCATTTT+CGG | + | chr6.4:51530854-51530873 | MS.gene05155:intron | 20.0% |
!!! | ATTAAGCATACAATTTTCTT+TGG | + | chr6.4:51525342-51525361 | MS.gene05155:intron | 20.0% |
!!! | ATTATTTGTTGTTTAAGGTT+AGG | + | chr6.4:51524447-51524466 | MS.gene05155:intron | 20.0% |
!!! | ATTGTTATTTTCTCTATTCA+TGG | + | chr6.4:51526719-51526738 | MS.gene05155:CDS | 20.0% |
!!! | CATGCATTTTTATTATAAAC+AGG | + | chr6.4:51527900-51527919 | MS.gene05155:intron | 20.0% |
!!! | CTCATATTATTTGTTGTTTA+AGG | + | chr6.4:51524442-51524461 | MS.gene05155:intron | 20.0% |
!!! | CTTGGTAGTAATATAAAATA+TGG | - | chr6.4:51527852-51527871 | None:intergenic | 20.0% |
!!! | GTATTGATCACATTTTTAAT+AGG | - | chr6.4:51524832-51524851 | None:intergenic | 20.0% |
!!! | GTTGTTTTTTGTGTTAATTT+TGG | + | chr6.4:51524955-51524974 | MS.gene05155:intron | 20.0% |
!!! | TAATTTGTTTTGTAAATCTG+AGG | - | chr6.4:51525419-51525438 | None:intergenic | 20.0% |
!!! | TTGAGAGATTTTAAGAATAA+CGG | - | chr6.4:51530401-51530420 | None:intergenic | 20.0% |
!!! | TTTTAGTCCTTCAAATTATA+AGG | - | chr6.4:51525657-51525676 | None:intergenic | 20.0% |
! | AAAAATGCATGATTAGAAAG+AGG | - | chr6.4:51527891-51527910 | None:intergenic | 25.0% |
! | AAACTCAAATAAGTCAATCT+AGG | + | chr6.4:51528261-51528280 | MS.gene05155:intron | 25.0% |
! | AAATTATACTGATGGAAACT+TGG | + | chr6.4:51527978-51527997 | MS.gene05155:CDS | 25.0% |
! | AATGGTACATTTCTGATTTA+TGG | + | chr6.4:51529831-51529850 | MS.gene05155:intron | 25.0% |
! | ACATTTCTGATTTATGGTTA+TGG | + | chr6.4:51529837-51529856 | MS.gene05155:intron | 25.0% |
! | ACGTTAAAAATTGGAATGTT+CGG | - | chr6.4:51530949-51530968 | None:intergenic | 25.0% |
! | ACTAGTTATGATAAAATCAG+CGG | - | chr6.4:51528492-51528511 | None:intergenic | 25.0% |
! | ACTGCTTAAAATACAAAACA+CGG | - | chr6.4:51527162-51527181 | None:intergenic | 25.0% |
! | AGGTATGAAAAATATGAAAC+AGG | + | chr6.4:51525005-51525024 | MS.gene05155:intron | 25.0% |
! | ATAACAATGTTGAACATGTT+TGG | - | chr6.4:51526707-51526726 | None:intergenic | 25.0% |
! | ATACTTGAAATACAAGGAAA+TGG | + | chr6.4:51525276-51525295 | MS.gene05155:CDS | 25.0% |
! | ATGAAAAATATGAAACAGGT+TGG | + | chr6.4:51525009-51525028 | MS.gene05155:intron | 25.0% |
! | ATGAAATAATACAAACTGCA+AGG | + | chr6.4:51529476-51529495 | MS.gene05155:intron | 25.0% |
! | ATTATAGTTAACTTTGTCTC+TGG | + | chr6.4:51527241-51527260 | MS.gene05155:intron | 25.0% |
! | ATTGATTGACGTTCAAATTA+AGG | + | chr6.4:51525588-51525607 | MS.gene05155:intron | 25.0% |
! | CAACAAATAATATGAGACAA+AGG | - | chr6.4:51524438-51524457 | None:intergenic | 25.0% |
! | CAGTATAATTTCCAATAATG+AGG | - | chr6.4:51527969-51527988 | None:intergenic | 25.0% |
! | CTATTGAAGATAAAAATGAG+AGG | + | chr6.4:51525089-51525108 | MS.gene05155:CDS | 25.0% |
! | CTTAATAAGTAATTAAGCAG+TGG | - | chr6.4:51526048-51526067 | None:intergenic | 25.0% |
! | GAGTAAGGACTAATTATTAT+AGG | + | chr6.4:51524563-51524582 | MS.gene05155:intron | 25.0% |
! | TAAGGTTTATATTCTAGTGT+AGG | + | chr6.4:51528955-51528974 | MS.gene05155:intron | 25.0% |
! | TACAAAGATTCTTGAACTTA+TGG | + | chr6.4:51527930-51527949 | MS.gene05155:CDS | 25.0% |
! | TACTAACATATTTGTCTGTT+TGG | + | chr6.4:51527581-51527600 | MS.gene05155:intron | 25.0% |
! | TCATACCTTAATGTTAAAGA+AGG | - | chr6.4:51524993-51525012 | None:intergenic | 25.0% |
! | TCATTATTATAGTAGGAGTA+AGG | + | chr6.4:51524548-51524567 | MS.gene05155:intron | 25.0% |
! | TTAACAAACATTCATATGGT+TGG | + | chr6.4:51529991-51530010 | MS.gene05155:intron | 25.0% |
! | TTAATAGTATATTGACGCTT+CGG | - | chr6.4:51526508-51526527 | None:intergenic | 25.0% |
! | TTATTAAGCCTTAATCATCA+AGG | + | chr6.4:51526060-51526079 | MS.gene05155:CDS | 25.0% |
! | TTCAGAATACTTGAAATACA+AGG | + | chr6.4:51525270-51525289 | MS.gene05155:CDS | 25.0% |
! | TTGATTGACGTTCAAATTAA+GGG | + | chr6.4:51525589-51525608 | MS.gene05155:intron | 25.0% |
! | TTGGTAAATCTTGTAATTGT+TGG | + | chr6.4:51529383-51529402 | MS.gene05155:CDS | 25.0% |
! | TTTCATATTGATCCTCATAA+TGG | + | chr6.4:51529707-51529726 | MS.gene05155:CDS | 25.0% |
!! | TATACCTGTTTTCAAAATTC+TGG | - | chr6.4:51526318-51526337 | None:intergenic | 25.0% |
!! | TTGTATTTCAAGTATTCTGA+AGG | - | chr6.4:51525271-51525290 | None:intergenic | 25.0% |
!! | TTTTCTTTATTGGGAATAAC+AGG | + | chr6.4:51527309-51527328 | MS.gene05155:intron | 25.0% |
!!! | AGATATTTTGATATTGACGT+AGG | - | chr6.4:51525444-51525463 | None:intergenic | 25.0% |
!!! | AGCTATTTTCAAAACTATTC+TGG | + | chr6.4:51528153-51528172 | MS.gene05155:intron | 25.0% |
!!! | ATTTTAGTTACATTGTAGTC+TGG | - | chr6.4:51524781-51524800 | None:intergenic | 25.0% |
!!! | ATTTTTTGTTTTTTGTGAGC+AGG | + | chr6.4:51526552-51526571 | MS.gene05155:intron | 25.0% |
!!! | CAAAAGTACTATAGAGTATT+CGG | - | chr6.4:51528318-51528337 | None:intergenic | 25.0% |
!!! | GTTAGCTTAGATTCAATTTT+GGG | - | chr6.4:51530683-51530702 | None:intergenic | 25.0% |
!!! | GTTTTTTAGTTTGACTAATG+AGG | - | chr6.4:51530738-51530757 | None:intergenic | 25.0% |
!!! | TGTTAGCTTAGATTCAATTT+TGG | - | chr6.4:51530684-51530703 | None:intergenic | 25.0% |
AAATGGTATTTGATGAGAAG+TGG | + | chr6.4:51525293-51525312 | MS.gene05155:CDS | 30.0% | |
AAGATTCTTGAACTTATGGA+TGG | + | chr6.4:51527934-51527953 | MS.gene05155:CDS | 30.0% | |
AATAAGGAAGGATTAAAACC+TGG | - | chr6.4:51526790-51526809 | None:intergenic | 30.0% | |
AATTGAATCAGATACTGAAC+CGG | + | chr6.4:51524609-51524628 | MS.gene05155:intron | 30.0% | |
ACCAAGTTTAGAAGCTATTA+AGG | - | chr6.4:51528010-51528029 | None:intergenic | 30.0% | |
AGAGGTAATTAAAGCCATAA+GGG | + | chr6.4:51526083-51526102 | MS.gene05155:intron | 30.0% | |
AGCATTTCTTCATATGGAAA+CGG | - | chr6.4:51524402-51524421 | None:intergenic | 30.0% | |
ATCTAACTACTTCTCTCAAT+AGG | + | chr6.4:51526834-51526853 | MS.gene05155:intron | 30.0% | |
ATGGTATTTAGGAACCAATA+AGG | - | chr6.4:51526806-51526825 | None:intergenic | 30.0% | |
CACATCCTTCTTTAACATTA+AGG | + | chr6.4:51524985-51525004 | MS.gene05155:intron | 30.0% | |
CGACGATATAAAATAGTTGA+AGG | + | chr6.4:51528930-51528949 | MS.gene05155:intron | 30.0% | |
CTAAAATCACACAAATTGAC+CGG | + | chr6.4:51524794-51524813 | MS.gene05155:intron | 30.0% | |
CTAACAGCAAAAACAACATA+TGG | - | chr6.4:51525181-51525200 | None:intergenic | 30.0% | |
CTTCTATCTATAATGACTGA+AGG | + | chr6.4:51528346-51528365 | MS.gene05155:intron | 30.0% | |
CTTGATAAGAAAGTAATAGG+AGG | - | chr6.4:51528883-51528902 | None:intergenic | 30.0% | |
CTTTCATCTTCTATTGGAAA+AGG | + | chr6.4:51525961-51525980 | MS.gene05155:CDS | 30.0% | |
GAAACCTATAATCTTCTCAA+TGG | + | chr6.4:51529289-51529308 | MS.gene05155:CDS | 30.0% | |
GACAAAGTGAAAAACATTAG+CGG | + | chr6.4:51529320-51529339 | MS.gene05155:CDS | 30.0% | |
GACTGATCCTTATAATTTGA+AGG | + | chr6.4:51525647-51525666 | MS.gene05155:intron | 30.0% | |
GGAACTAAAATGCATAATCT+TGG | - | chr6.4:51527870-51527889 | None:intergenic | 30.0% | |
GTAAATCTTGTAATTGTTGG+AGG | + | chr6.4:51529386-51529405 | MS.gene05155:CDS | 30.0% | |
GTCAAATTTACAAACTTACC+AGG | - | chr6.4:51530187-51530206 | None:intergenic | 30.0% | |
GTCAATCTAGGAATATTCAT+CGG | + | chr6.4:51528273-51528292 | MS.gene05155:intron | 30.0% | |
GTCCAAAATTCCAATAATGA+CGG | + | chr6.4:51526916-51526935 | MS.gene05155:intron | 30.0% | |
GTCTTCAAAGAATCAATGAA+TGG | + | chr6.4:51529813-51529832 | MS.gene05155:CDS | 30.0% | |
GTTGAACAAAGAACAAAAGT+TGG | + | chr6.4:51530115-51530134 | MS.gene05155:CDS | 30.0% | |
TAAAGTAATTCTTCAATGGC+AGG | - | chr6.4:51528825-51528844 | None:intergenic | 30.0% | |
TAAAGTGAATGCAGATGATT+TGG | + | chr6.4:51525228-51525247 | MS.gene05155:CDS | 30.0% | |
TAACCATTTGTGAGAGTTTA+TGG | - | chr6.4:51528230-51528249 | None:intergenic | 30.0% | |
TAATCTTCAATTTAGGAACC+TGG | + | chr6.4:51530166-51530185 | MS.gene05155:CDS | 30.0% | |
TAATTTCCAATAATGAGGTC+AGG | - | chr6.4:51527964-51527983 | None:intergenic | 30.0% | |
TATTTAGGAACCAATAAGGA+AGG | - | chr6.4:51526802-51526821 | None:intergenic | 30.0% | |
TCCACGAAATTGTAAACATA+GGG | + | chr6.4:51525383-51525402 | MS.gene05155:intron | 30.0% | |
TCCTTAATAGCTTCTAAACT+TGG | + | chr6.4:51528006-51528025 | MS.gene05155:CDS | 30.0% | |
TCGTCGAATTAAAATGTGTT+TGG | + | chr6.4:51529240-51529259 | MS.gene05155:intron | 30.0% | |
TCTAACTACTTCTCTCAATA+GGG | + | chr6.4:51526835-51526854 | MS.gene05155:intron | 30.0% | |
TGAACATGGGATCAATTTAT+GGG | + | chr6.4:51530081-51530100 | MS.gene05155:CDS | 30.0% | |
TTCAATACTTGATACCCTTA+TGG | - | chr6.4:51526100-51526119 | None:intergenic | 30.0% | |
TTCTCTATTCATGGATACTT+TGG | + | chr6.4:51526728-51526747 | MS.gene05155:CDS | 30.0% | |
TTGAACATGGGATCAATTTA+TGG | + | chr6.4:51530080-51530099 | MS.gene05155:CDS | 30.0% | |
TTGAATCTAAGCTAACATCA+AGG | + | chr6.4:51530687-51530706 | MS.gene05155:CDS | 30.0% | |
! | AAATGAGAGGAAAAAGCTTT+TGG | + | chr6.4:51525102-51525121 | MS.gene05155:CDS | 30.0% |
! | ATTGATTCATCTCCATTATG+AGG | - | chr6.4:51529722-51529741 | None:intergenic | 30.0% |
! | CTGTTTTCAAAATTCTGGTA+TGG | - | chr6.4:51526313-51526332 | None:intergenic | 30.0% |
! | GGATTTCAAATATTGGTCTA+CGG | - | chr6.4:51526896-51526915 | None:intergenic | 30.0% |
! | GTCATTATTGGAATTTTGGA+CGG | - | chr6.4:51526917-51526936 | None:intergenic | 30.0% |
! | GTTTTCTTTGTAGCTATACA+TGG | + | chr6.4:51530036-51530055 | MS.gene05155:intron | 30.0% |
! | TAACATGAGTTGAATTTGCA+GGG | + | chr6.4:51525873-51525892 | MS.gene05155:intron | 30.0% |
! | TGAGCAAATCGTTCTAAATA+AGG | - | chr6.4:51527790-51527809 | None:intergenic | 30.0% |
! | TTAAAATGTGTTTGGAACAG+TGG | + | chr6.4:51529248-51529267 | MS.gene05155:intron | 30.0% |
! | TTAACATGAGTTGAATTTGC+AGG | + | chr6.4:51525872-51525891 | MS.gene05155:intron | 30.0% |
! | TTATTTAGAACGATTTGCTC+AGG | + | chr6.4:51527789-51527808 | MS.gene05155:CDS | 30.0% |
! | TTTGGACGGATTTCAAATAT+TGG | - | chr6.4:51526903-51526922 | None:intergenic | 30.0% |
!! | AGGTTTTAATCCTTCCTTAT+TGG | + | chr6.4:51526789-51526808 | MS.gene05155:intron | 30.0% |
!! | CATACCAGAATTTTGAAAAC+AGG | + | chr6.4:51526311-51526330 | MS.gene05155:CDS | 30.0% |
!! | TACGAAAGTACCAGTTAAAA+AGG | + | chr6.4:51529940-51529959 | MS.gene05155:intron | 30.0% |
!! | TTCTCATGTTTTTGCCAAAT+TGG | - | chr6.4:51527014-51527033 | None:intergenic | 30.0% |
!!! | CATATGTTGTTTTTGCTGTT+AGG | + | chr6.4:51525179-51525198 | MS.gene05155:CDS | 30.0% |
!!! | GAATGCTTAGTTTTGATGAT+AGG | - | chr6.4:51527694-51527713 | None:intergenic | 30.0% |
!!! | TGCTTTAGAGATAGATTTTG+AGG | + | chr6.4:51525909-51525928 | MS.gene05155:CDS | 30.0% |
AAGGACTTGACTTTACTACT+AGG | + | chr6.4:51525980-51525999 | MS.gene05155:CDS | 35.0% | |
AATTTGAACTTCAGCCCTTA+CGG | - | chr6.4:51525774-51525793 | None:intergenic | 35.0% | |
ACAGCAAAAACAACATATGG+TGG | - | chr6.4:51525178-51525197 | None:intergenic | 35.0% | |
ACCAGTTAAAAAGGAACAGA+GGG | + | chr6.4:51529949-51529968 | MS.gene05155:intron | 35.0% | |
AGAAGGGAATTCTATCTCAA+TGG | + | chr6.4:51527743-51527762 | MS.gene05155:CDS | 35.0% | |
AGAGAATGGGGATTTGATAA+GGG | + | chr6.4:51526578-51526597 | MS.gene05155:CDS | 35.0% | |
AGCTGGAGATCCAATTAAAA+TGG | + | chr6.4:51526661-51526680 | MS.gene05155:CDS | 35.0% | |
AGGCTAGTGACGTTAAAAAT+TGG | - | chr6.4:51530958-51530977 | None:intergenic | 35.0% | |
AGTACATACCAAGAAATTGC+TGG | + | chr6.4:51528509-51528528 | MS.gene05155:CDS | 35.0% | |
ATACATCCTAAGTTGTACAC+AGG | + | chr6.4:51525138-51525157 | MS.gene05155:CDS | 35.0% | |
ATATGAAGAAATGCTTTGCC+AGG | + | chr6.4:51524407-51524426 | MS.gene05155:CDS | 35.0% | |
ATCCGACAAAGTGACATAAT+CGG | + | chr6.4:51526986-51527005 | MS.gene05155:intron | 35.0% | |
ATCGAAAGACAGAGAAGAAA+CGG | + | chr6.4:51529427-51529446 | MS.gene05155:CDS | 35.0% | |
ATGAAGATTCAGACGCTAAA+TGG | + | chr6.4:51528402-51528421 | MS.gene05155:CDS | 35.0% | |
ATGGCACTTTCATCTTCTAT+TGG | + | chr6.4:51525955-51525974 | MS.gene05155:CDS | 35.0% | |
CAAACTGATAGATATCGCAA+CGG | + | chr6.4:51529521-51529540 | MS.gene05155:CDS | 35.0% | |
CAAAGAACAAAAGTTGGCAA+AGG | + | chr6.4:51530121-51530140 | MS.gene05155:CDS | 35.0% | |
CTATAATCTTCTCAATGGCA+AGG | + | chr6.4:51529294-51529313 | MS.gene05155:CDS | 35.0% | |
CTTGCCATTGAGAAGATTAT+AGG | - | chr6.4:51529296-51529315 | None:intergenic | 35.0% | |
GAAGGGAATTCTATCTCAAT+GGG | + | chr6.4:51527744-51527763 | MS.gene05155:CDS | 35.0% | |
GAGAGGTAATTAAAGCCATA+AGG | + | chr6.4:51526082-51526101 | MS.gene05155:intron | 35.0% | |
GGAAAATTTCATTGCTTTGC+AGG | + | chr6.4:51530511-51530530 | MS.gene05155:intron | 35.0% | |
GGTTCAACTATAGTTCAATC+AGG | + | chr6.4:51524750-51524769 | MS.gene05155:intron | 35.0% | |
GTCCACGAAATTGTAAACAT+AGG | + | chr6.4:51525382-51525401 | MS.gene05155:intron | 35.0% | |
GTTCCATAAACTCTCACAAA+TGG | + | chr6.4:51528224-51528243 | MS.gene05155:intron | 35.0% | |
TACCAGTTAAAAAGGAACAG+AGG | + | chr6.4:51529948-51529967 | MS.gene05155:intron | 35.0% | |
TATAGTTGAACCAGTTCAAC+CGG | - | chr6.4:51524742-51524761 | None:intergenic | 35.0% | |
TCCATGAAATGTTAGTTCCA+TGG | + | chr6.4:51525737-51525756 | MS.gene05155:intron | 35.0% | |
TCGTTACTATAATATGCGAG+TGG | - | chr6.4:51528913-51528932 | None:intergenic | 35.0% | |
TCTTTATTGGGAATAACAGG+TGG | + | chr6.4:51527312-51527331 | MS.gene05155:intron | 35.0% | |
TGACTCTTTGATAAGGCAAA+TGG | + | chr6.4:51525714-51525733 | MS.gene05155:intron | 35.0% | |
TGGATCAAATACATTGATGC+CGG | - | chr6.4:51528718-51528737 | None:intergenic | 35.0% | |
TTAACATATTCCCAGAAACC+AGG | - | chr6.4:51525211-51525230 | None:intergenic | 35.0% | |
TTCCTCTCTATATAATGCCT+TGG | + | chr6.4:51527529-51527548 | MS.gene05155:intron | 35.0% | |
TTTGCTTCTTCTCAGTGAAA+GGG | - | chr6.4:51528785-51528804 | None:intergenic | 35.0% | |
! | ACTTTTGCAACAAATCAAGG+CGG | + | chr6.4:51529650-51529669 | MS.gene05155:CDS | 35.0% |
! | AGCTTAGATTCAATTTTGGG+TGG | - | chr6.4:51530680-51530699 | None:intergenic | 35.0% |
! | CCAACTTTTGCAACAAATCA+AGG | + | chr6.4:51529647-51529666 | MS.gene05155:CDS | 35.0% |
! | CTCTCAATAGGGACATTTTA+TGG | + | chr6.4:51526846-51526865 | MS.gene05155:intron | 35.0% |
! | CTTTTGTGTCTGCTATACAT+CGG | - | chr6.4:51529556-51529575 | None:intergenic | 35.0% |
! | GTCCGTCATTATTGGAATTT+TGG | - | chr6.4:51526921-51526940 | None:intergenic | 35.0% |
! | TAATAGGTTGAATCGACAAC+CGG | - | chr6.4:51524816-51524835 | None:intergenic | 35.0% |
! | TCTCTGTCTTTCGATTTTGA+TGG | - | chr6.4:51529422-51529441 | None:intergenic | 35.0% |
! | TGATGATAGGTTCAAGTTCT+TGG | - | chr6.4:51527681-51527700 | None:intergenic | 35.0% |
! | TGGAACATAATGTCTAAAGC+TGG | + | chr6.4:51529791-51529810 | MS.gene05155:CDS | 35.0% |
! | TGGCAAAGCATTTCTTCATA+TGG | - | chr6.4:51524408-51524427 | None:intergenic | 35.0% |
! | TGGGATCAATTTATGGGTTT+TGG | + | chr6.4:51530087-51530106 | MS.gene05155:CDS | 35.0% |
! | TTACCTCTCCTTGATGATTA+AGG | - | chr6.4:51526071-51526090 | None:intergenic | 35.0% |
! | TTTCAAATATTGGTCTACGG+TGG | - | chr6.4:51526893-51526912 | None:intergenic | 35.0% |
! | TTTTGGTCTAACAGTCATTG+AGG | + | chr6.4:51529607-51529626 | MS.gene05155:CDS | 35.0% |
!! | AAATGGAATCACTTTTCAGC+AGG | + | chr6.4:51526678-51526697 | MS.gene05155:CDS | 35.0% |
!! | AAGAAAGGTACCAATTCCTA+AGG | + | chr6.4:51530535-51530554 | MS.gene05155:CDS | 35.0% |
!! | CCTTGATTTGTTGCAAAAGT+TGG | - | chr6.4:51529650-51529669 | None:intergenic | 35.0% |
!! | GCAAACAAAGTGTTGAACAT+GGG | + | chr6.4:51530068-51530087 | MS.gene05155:CDS | 35.0% |
!! | TGATCAAGTAAGAGCATTAG+AGG | + | chr6.4:51527345-51527364 | MS.gene05155:CDS | 35.0% |
!! | TGCAAACAAAGTGTTGAACA+TGG | + | chr6.4:51530067-51530086 | MS.gene05155:CDS | 35.0% |
!! | TGTTTGGAACAGTGGATTTT+TGG | + | chr6.4:51529256-51529275 | MS.gene05155:intron | 35.0% |
!! | TTCAATGCTTTCTGAAGCTT+TGG | - | chr6.4:51526250-51526269 | None:intergenic | 35.0% |
!! | TTCTAAACTTGGTGTAACTC+AGG | + | chr6.4:51528017-51528036 | MS.gene05155:CDS | 35.0% |
!!! | TGTTTTTTGTCTCATCAGCA+AGG | + | chr6.4:51528629-51528648 | MS.gene05155:intron | 35.0% |
AAAACGTCGTCCGTCATTAT+TGG | - | chr6.4:51526929-51526948 | None:intergenic | 40.0% | |
AAAAGCAGAAGCTACTTCCA+AGG | + | chr6.4:51530598-51530617 | MS.gene05155:CDS | 40.0% | |
AAAAGGAACAGAGGGAGTAA+CGG | + | chr6.4:51529957-51529976 | MS.gene05155:intron | 40.0% | |
AAAGCAGAAGCTACTTCCAA+GGG | + | chr6.4:51530599-51530618 | MS.gene05155:CDS | 40.0% | |
AAGATCCATGTGTGTCATGT+AGG | + | chr6.4:51531078-51531097 | MS.gene05155:intron | 40.0% | |
AAGCCTTAATCATCAAGGAG+AGG | + | chr6.4:51526065-51526084 | MS.gene05155:CDS | 40.0% | |
AATAGCCTACATGACACACA+TGG | - | chr6.4:51531086-51531105 | None:intergenic | 40.0% | |
AATGATGACAACTGGGTTTG+AGG | - | chr6.4:51530656-51530675 | None:intergenic | 40.0% | |
ACATTCTTAGAGTCCCTTTC+TGG | + | chr6.4:51527716-51527735 | MS.gene05155:CDS | 40.0% | |
ATAGTTGAACCAGTTCAACC+GGG | - | chr6.4:51524741-51524760 | None:intergenic | 40.0% | |
CAGAGAATGGGGATTTGATA+AGG | + | chr6.4:51526577-51526596 | MS.gene05155:CDS | 40.0% | |
CATACCAAGAAATTGCTGGA+AGG | + | chr6.4:51528513-51528532 | MS.gene05155:CDS | 40.0% | |
CCAAAAGCTTCATACAATGC+TGG | - | chr6.4:51529593-51529612 | None:intergenic | 40.0% | |
CCAGCTGAAATCATTGTTGA+TGG | + | chr6.4:51529674-51529693 | MS.gene05155:CDS | 40.0% | |
CCATCAACAATGATTTCAGC+TGG | - | chr6.4:51529677-51529696 | None:intergenic | 40.0% | |
CGACTGAGACTTTGATTGAT+TGG | - | chr6.4:51527100-51527119 | None:intergenic | 40.0% | |
CGATGTATAGCAGACACAAA+AGG | + | chr6.4:51529554-51529573 | MS.gene05155:CDS | 40.0% | |
CTTTGCTTCTTCTCAGTGAA+AGG | - | chr6.4:51528786-51528805 | None:intergenic | 40.0% | |
CTTTGTCGGATGTTACAACA+AGG | - | chr6.4:51526977-51526996 | None:intergenic | 40.0% | |
GAACAAGAGACTAAGAAGCT+TGG | + | chr6.4:51529364-51529383 | MS.gene05155:CDS | 40.0% | |
GACAATGAGAATGCTTTCTG+AGG | + | chr6.4:51526631-51526650 | MS.gene05155:CDS | 40.0% | |
GACATTATGTTCCAGTGTTC+AGG | - | chr6.4:51529785-51529804 | None:intergenic | 40.0% | |
GAGAATGGGGATTTGATAAG+GGG | + | chr6.4:51526579-51526598 | MS.gene05155:CDS | 40.0% | |
GCCATGGAACTAACATTTCA+TGG | - | chr6.4:51525741-51525760 | None:intergenic | 40.0% | |
GCCCTATGTTTACAATTTCG+TGG | - | chr6.4:51525387-51525406 | None:intergenic | 40.0% | |
GCTTAAGACATGTCATAAGC+TGG | + | chr6.4:51528202-51528221 | MS.gene05155:intron | 40.0% | |
GGAAAACCTGACCTCATTAT+TGG | + | chr6.4:51527955-51527974 | MS.gene05155:CDS | 40.0% | |
GGCTGAAGTTCAAATTTCTC+TGG | + | chr6.4:51525778-51525797 | MS.gene05155:intron | 40.0% | |
GTCTGATACCGAATGCAAAA+GGG | + | chr6.4:51527644-51527663 | MS.gene05155:CDS | 40.0% | |
TAGCATACCACAAGAATCTG+AGG | - | chr6.4:51527415-51527434 | None:intergenic | 40.0% | |
TATTCCCAGAAACCAGGATT+TGG | - | chr6.4:51525205-51525224 | None:intergenic | 40.0% | |
TCAACCTTCCAGCAATTTCT+TGG | - | chr6.4:51528520-51528539 | None:intergenic | 40.0% | |
TGAACTCTCACTCAATCTTG+AGG | - | chr6.4:51526013-51526032 | None:intergenic | 40.0% | |
TGATTTCACCACACCTCATA+TGG | + | chr6.4:51525936-51525955 | MS.gene05155:CDS | 40.0% | |
TTTCTCCAAAGCATGAGCAA+TGG | - | chr6.4:51528375-51528394 | None:intergenic | 40.0% | |
TTTGGTCAAGCTGATGTTCT+AGG | + | chr6.4:51526746-51526765 | MS.gene05155:CDS | 40.0% | |
! | AGCCAAGGCATTATATAGAG+AGG | - | chr6.4:51527534-51527553 | None:intergenic | 40.0% |
! | ATTGTGCATTTTCGGACTCA+AGG | + | chr6.4:51530862-51530881 | MS.gene05155:intron | 40.0% |
! | CATGTTGTCCCTTTTGCATT+CGG | - | chr6.4:51527655-51527674 | None:intergenic | 40.0% |
! | CCAGCATTGTATGAAGCTTT+TGG | + | chr6.4:51529590-51529609 | MS.gene05155:CDS | 40.0% |
! | CTGCAAAAGATTGAGTTGCA+AGG | + | chr6.4:51527376-51527395 | MS.gene05155:CDS | 40.0% |
! | GAATCTGAGGCTTCACATTA+AGG | - | chr6.4:51527402-51527421 | None:intergenic | 40.0% |
! | GAGAGGAAAAAGCTTTTGGA+GGG | + | chr6.4:51525106-51525125 | MS.gene05155:CDS | 40.0% |
! | GCAGATGATTTGGAAGTAGA+TGG | + | chr6.4:51525238-51525257 | MS.gene05155:CDS | 40.0% |
! | GGACTGTGAACTTCTACTTT+TGG | + | chr6.4:51527132-51527151 | MS.gene05155:intron | 40.0% |
! | TCCCTCTGTTCCTTTTTAAC+TGG | - | chr6.4:51529953-51529972 | None:intergenic | 40.0% |
! | TGACATTGGTTGAGGTTCTT+GGG | - | chr6.4:51530564-51530583 | None:intergenic | 40.0% |
! | TGAGAGGAAAAAGCTTTTGG+AGG | + | chr6.4:51525105-51525124 | MS.gene05155:CDS | 40.0% |
! | TTCAATGGCAGGTTGAAAAG+TGG | - | chr6.4:51528814-51528833 | None:intergenic | 40.0% |
! | TTGACATTGGTTGAGGTTCT+TGG | - | chr6.4:51530565-51530584 | None:intergenic | 40.0% |
!! | AAGCTTTTGGAGGGCTTATT+CGG | + | chr6.4:51525115-51525134 | MS.gene05155:CDS | 40.0% |
!! | ATCATTGTTGATGGTGTCTC+AGG | + | chr6.4:51529683-51529702 | MS.gene05155:CDS | 40.0% |
!! | ATGGAAACGGCTTTGTTTCA+AGG | - | chr6.4:51524389-51524408 | None:intergenic | 40.0% |
!! | GAAACAGGTTGGTTGCAAAT+GGG | + | chr6.4:51525020-51525039 | MS.gene05155:intron | 40.0% |
!! | GAAGATGAAAGTGCCATATG+AGG | - | chr6.4:51525952-51525971 | None:intergenic | 40.0% |
!! | GTGTAACTCAGGTTAGCTTA+TGG | + | chr6.4:51528028-51528047 | MS.gene05155:intron | 40.0% |
!! | TGAAACAGGTTGGTTGCAAA+TGG | + | chr6.4:51525019-51525038 | MS.gene05155:intron | 40.0% |
!!! | GGAAGTAGCTTCTGCTTTTT+TGG | - | chr6.4:51530597-51530616 | None:intergenic | 40.0% |
AACTGCAAGGTCAGTTCAGA+TGG | + | chr6.4:51529489-51529508 | MS.gene05155:intron | 45.0% | |
AAGCAGAAGCTACTTCCAAG+GGG | + | chr6.4:51530600-51530619 | MS.gene05155:CDS | 45.0% | |
AAGTTCAACATTGCTGCTCC+AGG | + | chr6.4:51528738-51528757 | MS.gene05155:CDS | 45.0% | |
AATGGGGATTTGATAAGGGG+TGG | + | chr6.4:51526582-51526601 | MS.gene05155:CDS | 45.0% | |
ATGGGGATTTGATAAGGGGT+GGG | + | chr6.4:51526583-51526602 | MS.gene05155:CDS | 45.0% | |
ATTCCCTTCTCTGTCCAGAA+AGG | - | chr6.4:51527733-51527752 | None:intergenic | 45.0% | |
CAATCAAAGTCTCAGTCGTG+AGG | + | chr6.4:51527102-51527121 | MS.gene05155:intron | 45.0% | |
CATCCTAAGTTGTACACAGG+AGG | + | chr6.4:51525141-51525160 | MS.gene05155:CDS | 45.0% | |
CATTGCTTTGCAGGCAAGAA+AGG | + | chr6.4:51530520-51530539 | MS.gene05155:intron | 45.0% | |
CCAGTGAAACATATGAGCCA+AGG | - | chr6.4:51527549-51527568 | None:intergenic | 45.0% | |
CCTTGGCTCATATGTTTCAC+TGG | + | chr6.4:51527546-51527565 | MS.gene05155:intron | 45.0% | |
CGTCTGATACCGAATGCAAA+AGG | + | chr6.4:51527643-51527662 | MS.gene05155:CDS | 45.0% | |
GATCATTGTCAGTGTCAACG+TGG | - | chr6.4:51526415-51526434 | None:intergenic | 45.0% | |
GCAAGACTAATCCTGAACAC+TGG | + | chr6.4:51529771-51529790 | MS.gene05155:CDS | 45.0% | |
GGAGCAGCAATGTTGAACTT+TGG | - | chr6.4:51528738-51528757 | None:intergenic | 45.0% | |
GTCATTGAGGCAATGAACTG+TGG | + | chr6.4:51529620-51529639 | MS.gene05155:CDS | 45.0% | |
GTGTGAGTTTCATATTGCCC+TGG | - | chr6.4:51528660-51528679 | None:intergenic | 45.0% | |
TAGACAGATTGATCAGCTCC+TGG | - | chr6.4:51528759-51528778 | None:intergenic | 45.0% | |
TAGGCCAAATCCTGGTTTCT+GGG | + | chr6.4:51525198-51525217 | MS.gene05155:CDS | 45.0% | |
TCACACTGCATTTACCATGC+CGG | + | chr6.4:51528674-51528693 | MS.gene05155:CDS | 45.0% | |
TCATCAGCAAGGATAGACCA+GGG | + | chr6.4:51528640-51528659 | MS.gene05155:intron | 45.0% | |
TGACACGACACGGAAACATT+TGG | - | chr6.4:51526464-51526483 | None:intergenic | 45.0% | |
TGACATAATCGGCGCCAATT+TGG | + | chr6.4:51526997-51527016 | MS.gene05155:intron | 45.0% | |
TGTCGGATGTTACAACAAGG+AGG | - | chr6.4:51526974-51526993 | None:intergenic | 45.0% | |
TGTGAAGCCTCAGATTCTTG+TGG | + | chr6.4:51527405-51527424 | MS.gene05155:CDS | 45.0% | |
TGTGAGCAGGTTCAGAGAAT+GGG | + | chr6.4:51526565-51526584 | MS.gene05155:intron | 45.0% | |
TTAGGCCAAATCCTGGTTTC+TGG | + | chr6.4:51525197-51525216 | MS.gene05155:CDS | 45.0% | |
TTCCCTTCTCTGTCCAGAAA+GGG | - | chr6.4:51527732-51527751 | None:intergenic | 45.0% | |
TTGTGAGCAGGTTCAGAGAA+TGG | + | chr6.4:51526564-51526583 | MS.gene05155:intron | 45.0% | |
! | ACTAGCCTAAACGTCCAATG+TGG | + | chr6.4:51530970-51530989 | MS.gene05155:intron | 45.0% |
! | GACATTGGTTGAGGTTCTTG+GGG | - | chr6.4:51530563-51530582 | None:intergenic | 45.0% |
! | GGGTGGTAATGATGACAACT+GGG | - | chr6.4:51530663-51530682 | None:intergenic | 45.0% |
! | GGTTGGTTGCAAATGGGAAA+AGG | + | chr6.4:51525026-51525045 | MS.gene05155:intron | 45.0% |
! | TCTTGGGGTACCTTAGGAAT+TGG | - | chr6.4:51530548-51530567 | None:intergenic | 45.0% |
! | TGGGTGGTAATGATGACAAC+TGG | - | chr6.4:51530664-51530683 | None:intergenic | 45.0% |
!! | AGGTCAGTTCAGATGGATTG+CGG | + | chr6.4:51529496-51529515 | MS.gene05155:intron | 45.0% |
!! | CGCCGATTATGTCACTTTGT+CGG | - | chr6.4:51526991-51527010 | None:intergenic | 45.0% |
!! | CTTTCTGAGGTACTAGAAGC+TGG | + | chr6.4:51526644-51526663 | MS.gene05155:CDS | 45.0% |
!! | GGTGTTGTTGACATTGGTTG+AGG | - | chr6.4:51530572-51530591 | None:intergenic | 45.0% |
!! | TATGAGACAAAGGGAGTACC+TGG | - | chr6.4:51524428-51524447 | None:intergenic | 45.0% |
!! | TGAAAGTGCCATATGAGGTG+TGG | - | chr6.4:51525947-51525966 | None:intergenic | 45.0% |
!! | TTGGCAGGTGTTGTTGACAT+TGG | - | chr6.4:51530578-51530597 | None:intergenic | 45.0% |
!! | TTTGCTGTTAGGCCAAATCC+TGG | + | chr6.4:51525190-51525209 | MS.gene05155:CDS | 45.0% |
!!! | GTAGCTTCTGCTTTTTTGGC+AGG | - | chr6.4:51530593-51530612 | None:intergenic | 45.0% |
!!! | TTTTTTTTCATTATAAAAAA+TGG | + | chr6.4:51525849-51525868 | MS.gene05155:intron | 5.0% |
AGTCCCTTTCTGGACAGAGA+AGG | + | chr6.4:51527726-51527745 | MS.gene05155:CDS | 50.0% | |
CACACTGCATTTACCATGCC+GGG | + | chr6.4:51528675-51528694 | MS.gene05155:CDS | 50.0% | |
CTATGACCCAAAAGTCTCGC+CGG | - | chr6.4:51524631-51524650 | None:intergenic | 50.0% | |
CTCATCAGCAAGGATAGACC+AGG | + | chr6.4:51528639-51528658 | MS.gene05155:intron | 50.0% | |
CTGCCTCCTGTGTACAACTT+AGG | - | chr6.4:51525147-51525166 | None:intergenic | 50.0% | |
GGCAACCATTGCTCATGCTT+TGG | + | chr6.4:51528367-51528386 | MS.gene05155:intron | 50.0% | |
GTCCCTTTCTGGACAGAGAA+GGG | + | chr6.4:51527727-51527746 | MS.gene05155:CDS | 50.0% | |
GTGAGCAGGTTCAGAGAATG+GGG | + | chr6.4:51526566-51526585 | MS.gene05155:intron | 50.0% | |
GTTCGCCACATTGGACGTTT+AGG | - | chr6.4:51530978-51530997 | None:intergenic | 50.0% | |
TCTCAGTCGTGAGGACAAAG+AGG | + | chr6.4:51527111-51527130 | MS.gene05155:intron | 50.0% | |
TGGGGATTTGATAAGGGGTG+GGG | + | chr6.4:51526584-51526603 | MS.gene05155:CDS | 50.0% | |
TTGAACCAGTTCAACCGGGT+CGG | - | chr6.4:51524737-51524756 | None:intergenic | 50.0% | |
! | ACTGAACCGGCGAGACTTTT+GGG | + | chr6.4:51524622-51524641 | MS.gene05155:intron | 50.0% |
! | GAAAGTTGGTTGAACCGACC+CGG | + | chr6.4:51524720-51524739 | MS.gene05155:intron | 50.0% |
! | TACTGAACCGGCGAGACTTT+TGG | + | chr6.4:51524621-51524640 | MS.gene05155:intron | 50.0% |
! | TGAGGTTCTTGGGGTACCTT+AGG | - | chr6.4:51530554-51530573 | None:intergenic | 50.0% |
!! | CGGCTTTGTTTCAAGGCATC+AGG | - | chr6.4:51524382-51524401 | None:intergenic | 50.0% |
!! | GTTCTAGGATTGCCAGACAC+TGG | + | chr6.4:51526761-51526780 | MS.gene05155:CDS | 50.0% |
AAAACCTGGCCTCCAGTGTC+TGG | - | chr6.4:51526776-51526795 | None:intergenic | 55.0% | |
ACATTAGCGGCCTAGTCGAG+TGG | + | chr6.4:51529333-51529352 | MS.gene05155:CDS | 55.0% | |
CGCTAACGTGTTCCATGCAC+AGG | + | chr6.4:51527615-51527634 | MS.gene05155:intron | 55.0% | |
CTAGGATTGCCAGACACTGG+AGG | + | chr6.4:51526764-51526783 | MS.gene05155:CDS | 55.0% | |
GAGACTACGCGACAAAGTCC+CGG | - | chr6.4:51528696-51528715 | None:intergenic | 55.0% | |
GCAACACTCGTTCGCCACAT+TGG | - | chr6.4:51530987-51531006 | None:intergenic | 55.0% | |
GGACTTTGTCGCGTAGTCTC+CGG | + | chr6.4:51528696-51528715 | MS.gene05155:CDS | 55.0% | |
GTGGGGAAACACTGCAGGAA+GGG | + | chr6.4:51526601-51526620 | MS.gene05155:CDS | 55.0% | |
TCAGACGCGTAACCTGTGCA+TGG | - | chr6.4:51527630-51527649 | None:intergenic | 55.0% | |
TCTTCGCGAACCACTCGACT+AGG | - | chr6.4:51529346-51529365 | None:intergenic | 55.0% | |
TGGTGTACCGTCTCGACATG+TGG | + | chr6.4:51526866-51526885 | MS.gene05155:intron | 55.0% | |
TTACGGTCACGCTCTTGCCA+TGG | - | chr6.4:51525757-51525776 | None:intergenic | 55.0% | |
TTGAACCGACCCGGTTGAAC+TGG | + | chr6.4:51524729-51524748 | MS.gene05155:intron | 55.0% | |
TTGTGCTGCATCATGCCCCT+TGG | - | chr6.4:51530618-51530637 | None:intergenic | 55.0% | |
! | ATGGCAAGAGCGTGACCGTA+AGG | + | chr6.4:51525756-51525775 | MS.gene05155:intron | 55.0% |
! | TGGCAAGAGCGTGACCGTAA+GGG | + | chr6.4:51525757-51525776 | MS.gene05155:intron | 55.0% |
! | TTCCGTGTCGTGTCACTGTG+CGG | + | chr6.4:51526469-51526488 | MS.gene05155:intron | 55.0% |
AAGGGGTGGGGAAACACTGC+AGG | + | chr6.4:51526596-51526615 | MS.gene05155:CDS | 60.0% | |
ATTGCCAGACACTGGAGGCC+AGG | + | chr6.4:51526769-51526788 | MS.gene05155:CDS | 60.0% | |
CGGTGGACCACATGTCGAGA+CGG | - | chr6.4:51526876-51526895 | None:intergenic | 60.0% | |
GGTGGGGAAACACTGCAGGA+AGG | + | chr6.4:51526600-51526619 | MS.gene05155:CDS | 60.0% | |
GTCCGCACAGTGACACGACA+CGG | - | chr6.4:51526474-51526493 | None:intergenic | 60.0% | |
TACGCGACAAAGTCCCGGCA+TGG | - | chr6.4:51528691-51528710 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 51524322 | 51531139 | 51524322 | ID=MS.gene05155 |
chr6.4 | mRNA | 51524322 | 51531139 | 51524322 | ID=MS.gene05155.t1;Parent=MS.gene05155 |
chr6.4 | exon | 51524322 | 51524428 | 51524322 | ID=MS.gene05155.t1.exon1;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51524322 | 51524428 | 51524322 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51525027 | 51525314 | 51525027 | ID=MS.gene05155.t1.exon2;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51525027 | 51525314 | 51525027 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51525894 | 51526086 | 51525894 | ID=MS.gene05155.t1.exon3;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51525894 | 51526086 | 51525894 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51526214 | 51526332 | 51526214 | ID=MS.gene05155.t1.exon4;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51526214 | 51526332 | 51526214 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51526574 | 51526790 | 51526574 | ID=MS.gene05155.t1.exon5;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51526574 | 51526790 | 51526574 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51527331 | 51527426 | 51527331 | ID=MS.gene05155.t1.exon6;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51527331 | 51527426 | 51527331 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51527637 | 51527810 | 51527637 | ID=MS.gene05155.t1.exon7;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51527637 | 51527810 | 51527637 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51527922 | 51528038 | 51527922 | ID=MS.gene05155.t1.exon8;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51527922 | 51528038 | 51527922 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51528368 | 51528534 | 51528368 | ID=MS.gene05155.t1.exon9;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51528368 | 51528534 | 51528368 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51528647 | 51528871 | 51528647 | ID=MS.gene05155.t1.exon10;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51528647 | 51528871 | 51528647 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51529268 | 51529465 | 51529268 | ID=MS.gene05155.t1.exon11;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51529268 | 51529465 | 51529268 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51529508 | 51529834 | 51529508 | ID=MS.gene05155.t1.exon12;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51529508 | 51529834 | 51529508 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51530049 | 51530187 | 51530049 | ID=MS.gene05155.t1.exon13;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51530049 | 51530187 | 51530049 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51530533 | 51530708 | 51530533 | ID=MS.gene05155.t1.exon14;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51530533 | 51530708 | 51530533 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
chr6.4 | exon | 51531100 | 51531139 | 51531100 | ID=MS.gene05155.t1.exon15;Parent=MS.gene05155.t1 |
chr6.4 | CDS | 51531100 | 51531139 | 51531100 | ID=cds.MS.gene05155.t1;Parent=MS.gene05155.t1 |
Gene Sequence |
Protein sequence |