AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35631

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35631.t1 MTR_3g073620 97.066 1977 58 0 1 1977 1 1977 0.0 3869
MS.gene35631.t1 MTR_1g100633 28.238 386 209 9 7 384 5 330 1.19e-37 154
MS.gene35631.t1 MTR_1g100633 28.238 386 209 9 7 384 5 330 1.46e-37 154
MS.gene35631.t1 MTR_1g100633 27.979 386 210 8 7 384 5 330 2.33e-37 153
MS.gene35631.t1 MTR_8g097350 39.062 192 110 3 6 191 3 193 1.12e-36 152
MS.gene35631.t1 MTR_1g062200 35.099 151 96 2 1 150 1 150 1.33e-25 116
MS.gene35631.t1 MTR_1g062200 35.099 151 96 2 1 150 1 150 2.34e-25 115
MS.gene35631.t1 MTR_1g090807 36.220 127 77 4 22 147 47 170 8.52e-16 84.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35631.t1 AT1G22060 44.033 2053 990 36 1 1962 1 1985 0.0 1439
MS.gene35631.t1 AT1G22060 44.033 2053 990 36 1 1962 1 1985 0.0 1439
MS.gene35631.t1 AT5G41140 46.429 140 73 2 1 138 1 140 2.49e-36 151
MS.gene35631.t1 AT5G41140 46.429 140 73 2 1 138 1 140 2.65e-36 150
MS.gene35631.t1 AT1G63300 43.885 139 77 1 1 138 1 139 2.31e-35 148
MS.gene35631.t1 AT1G63300 28.316 392 221 13 1586 1960 679 1027 1.30e-13 77.4
MS.gene35631.t1 AT5G52280 32.016 253 151 4 7 246 5 249 5.46e-35 146

Find 302 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAACCTCTACTTCAATTT+TGG 0.118980 3.3:-63648478 None:intergenic
TTAAATTTGCCTCTAAAATT+TGG 0.129734 3.3:-63645872 None:intergenic
TTATCTGCTCATTCATATTT+TGG 0.147127 3.3:-63645185 None:intergenic
CTGCAGAAGCAGCCCTTAAA+AGG 0.164880 3.3:+63645274 MS.gene35631:CDS
ACGTCTTGAAGATGCTTTAA+AGG 0.191930 3.3:+63647342 MS.gene35631:CDS
TTCATAATTTACAGTTTAAA+TGG 0.194292 3.3:+63644602 MS.gene35631:CDS
TTAGTACAATTCACTAGTTC+TGG 0.227614 3.3:-63645444 None:intergenic
CAAAATCATTCTGATGAAAT+TGG 0.232300 3.3:+63644388 MS.gene35631:CDS
CTTGACTAAGATCCTGATTT+CGG 0.233390 3.3:-63646610 None:intergenic
ATCTTCTTCTATTAGTTATC+TGG 0.233647 3.3:+63647366 MS.gene35631:CDS
TGCGCGATGAAAAGAATTTC+AGG 0.235805 3.3:+63646813 MS.gene35631:CDS
CCATTCAGCTGCAAATAATT+TGG 0.239363 3.3:+63644267 MS.gene35631:CDS
GAATCTAGCGATCCAATTTC+AGG 0.240103 3.3:+63644760 MS.gene35631:CDS
AGAAAATATTCGAACTTCTA+AGG 0.243989 3.3:+63644965 MS.gene35631:CDS
TAATGTGATTATTAACATTC+TGG 0.244279 3.3:-63643749 None:intergenic
TTCTGAAGATAGGCGCATTT+TGG 0.245959 3.3:+63645215 MS.gene35631:CDS
CGGAGAATTCGGAGCCATTT+TGG 0.247898 3.3:-63651194 None:intergenic
GAATGATATCCTCTCGTTAA+AGG 0.252669 3.3:+63645800 MS.gene35631:CDS
ACAACTTTAGTCCCTGAAAT+TGG 0.252818 3.3:-63644772 None:intergenic
TGTAGCAGTAGCAGTCTTAA+AGG 0.253214 3.3:+63644307 MS.gene35631:CDS
GAAGAATGTACCTCTGAAAT+TGG 0.257804 3.3:-63650139 None:intergenic
AAATGCTTATGACCTGTTAA+AGG 0.259151 3.3:+63648362 MS.gene35631:CDS
GGAATTGGAGGCTGAGTTAC+AGG 0.259330 3.3:+63648311 MS.gene35631:CDS
CCAATGAGTCACTGGTTCTT+AGG 0.263165 3.3:+63645763 MS.gene35631:CDS
TTCCTTTCATAGACAACATT+TGG 0.266977 3.3:+63645518 MS.gene35631:CDS
TTGACTAAGATCCTGATTTC+GGG 0.269466 3.3:-63646609 None:intergenic
AAGAACCTAAAATCCCTTTC+AGG 0.282665 3.3:-63644688 None:intergenic
AAGCAGTATTCAGAAGTTTC+AGG 0.283820 3.3:+63651002 MS.gene35631:CDS
AGAAGGCTTTGTACGGAAAA+TGG 0.284210 3.3:+63645014 MS.gene35631:CDS
AAAGCCTTCTCTTTCAGTTT+TGG 0.284332 3.3:-63645001 None:intergenic
TGTTAATAATCACATTAATA+AGG 0.284656 3.3:+63643755 MS.gene35631:CDS
CAGCTTCTCACTTCCAAAAC+TGG 0.285362 3.3:+63643539 MS.gene35631:CDS
CCTCTTCAGTTCCCAGAGTT+TGG 0.289302 3.3:-63649525 None:intergenic
TTGGATGCTAGACTTCTTCT+TGG 0.292834 3.3:-63650120 None:intergenic
GACTCAGCTGCTGGATTTGA+TGG 0.303288 3.3:+63644052 MS.gene35631:CDS
TTGTAGTAGTTCTGCTTGTT+TGG 0.309497 3.3:+63646214 MS.gene35631:CDS
AGATAACGAGCCATGCTTTC+GGG 0.309608 3.3:-63644880 None:intergenic
AGATATTCAGAAAGTATCTA+TGG 0.310607 3.3:+63644660 MS.gene35631:CDS
TTTGACTTTGGCTTCTTCAT+TGG 0.312444 3.3:-63647839 None:intergenic
TCTTTCATCCCTGCTGACTC+TGG 0.319816 3.3:+63642494 MS.gene35631:CDS
TGAAGCCAGTCTTAACATTC+AGG 0.322615 3.3:+63645686 MS.gene35631:CDS
TCCTACTCTTGTGTTCCTTA+AGG 0.323172 3.3:-63647702 None:intergenic
AGCACAATGTCTGGTGATTT+AGG 0.324173 3.3:+63644142 MS.gene35631:CDS
TCCATTTCTCACATTTGCTT+TGG 0.325285 3.3:-63642537 None:intergenic
TACCAGGAGGCTTTCTGAAC+AGG 0.336294 3.3:+63647966 MS.gene35631:CDS
CTGAAGTAGGTCGGAGAATT+CGG 0.342770 3.3:-63651205 None:intergenic
GAGGCAAATTTAAAAGATCT+TGG 0.346365 3.3:+63645882 MS.gene35631:CDS
AATGTACCTAAAACCAGTTT+TGG 0.346600 3.3:-63643552 None:intergenic
AGTCTTGTAGTTTCATAGAT+TGG 0.349959 3.3:-63642578 None:intergenic
CTGATTCAAGTTTCTGCAAC+TGG 0.350652 3.3:-63646463 None:intergenic
TTGCCTCTAAAATTTGGTTC+TGG 0.351436 3.3:-63645866 None:intergenic
TATAGTTCTCCAGGGAAAAC+TGG 0.355210 3.3:+63647864 MS.gene35631:CDS
CTTGTCATGAAACAGAAGTT+TGG 0.362017 3.3:+63646395 MS.gene35631:CDS
TTTACAGTTTAAATGGCATA+AGG 0.366049 3.3:+63644609 MS.gene35631:CDS
AGGATTGAATTTGCACTCTC+TGG 0.368256 3.3:-63648624 None:intergenic
GATCAGGCCAATCAAGAGTT+AGG 0.371338 3.3:+63650002 MS.gene35631:intron
TAGCATTGAGCACCTGAATA+AGG 0.372993 3.3:+63649603 MS.gene35631:CDS
TTACAGTTTAAATGGCATAA+GGG 0.382590 3.3:+63644610 MS.gene35631:CDS
GCTGTTGCTTTGCCTCTTAA+CGG 0.383729 3.3:+63643258 MS.gene35631:CDS
GAGATAACGAGCCATGCTTT+CGG 0.383823 3.3:-63644881 None:intergenic
TACAGAGGAGAAGAAAGCTT+TGG 0.392239 3.3:+63646697 MS.gene35631:CDS
GCAACTGAATTCCCGAAATC+AGG 0.394944 3.3:+63646598 MS.gene35631:CDS
CATGCTTCCTAACTCTTGAT+TGG 0.395198 3.3:-63650009 None:intergenic
CAGTTCTTGTCTGTTCATAT+CGG 0.399307 3.3:-63647242 None:intergenic
TTGTCATGAAACAGAAGTTT+GGG 0.401598 3.3:+63646396 MS.gene35631:CDS
TGCAAGGCTGGAGCAATTGC+TGG 0.406540 3.3:+63647780 MS.gene35631:CDS
ACCAAAGCAAATGTGAGAAA+TGG 0.406973 3.3:+63642536 MS.gene35631:CDS
CAGAACTAAATTTGATGTGC+TGG 0.407090 3.3:+63646091 MS.gene35631:CDS
GGGAATGAAGATCTTGGAAT+TGG 0.409774 3.3:+63648296 MS.gene35631:CDS
TCTTGAACTTCTTTCTTGCC+AGG 0.415122 3.3:+63645341 MS.gene35631:CDS
TAGTACAATTCACTAGTTCT+GGG 0.417739 3.3:-63645443 None:intergenic
ATTCAAGAGGGAAATTGAAA+AGG 0.418804 3.3:+63643963 MS.gene35631:CDS
GAATTTGTCTACTCATTTGA+AGG 0.419500 3.3:+63648011 MS.gene35631:CDS
ATTAATCTCAGATGAAATCT+TGG 0.420944 3.3:-63646753 None:intergenic
GAATACTCGAGCATCCAAAA+TGG 0.422813 3.3:+63651180 MS.gene35631:CDS
CCTCTTAACGGAAGTGAGCC+TGG 0.422879 3.3:+63643270 MS.gene35631:CDS
CCAAATTATTTGCAGCTGAA+TGG 0.423020 3.3:-63644267 None:intergenic
ATTAGAAAGGGTGCTTGCTT+TGG 0.424943 3.3:+63650070 MS.gene35631:CDS
TCAATTAAGCCTTCAGTTCG+CGG 0.427124 3.3:+63651117 MS.gene35631:CDS
TTTCTTGCTTGCAACATTCA+AGG 0.427481 3.3:-63648410 None:intergenic
CTGGAAAGTGTCAGCAGAGA+TGG 0.431057 3.3:+63647799 MS.gene35631:CDS
TTCTTGAGCATTTAATAAAG+AGG 0.433551 3.3:-63648568 None:intergenic
GGTGCCCTAGTGTGGGGATA+AGG 0.439675 3.3:-63651236 None:intergenic
CAGGACAATGCTTGGGCTCA+TGG 0.440647 3.3:+63644232 MS.gene35631:CDS
GTCAGTTCTCTTTGCAGACC+TGG 0.441745 3.3:-63649895 None:intergenic
AATAAAAGTAAATGAAGAGC+TGG 0.442603 3.3:+63648275 MS.gene35631:CDS
CCTAAGAACCAGTGACTCAT+TGG 0.442948 3.3:-63645763 None:intergenic
AGAGCTGGGAATGAAGATCT+TGG 0.443285 3.3:+63648290 MS.gene35631:CDS
TACTTCTATAATCTGTCAAA+AGG 0.443583 3.3:-63645950 None:intergenic
CTCCTTTAGTTCTGTCTCCA+TGG 0.443636 3.3:-63651077 None:intergenic
AGTCAAATGTATAGTTCTCC+AGG 0.447255 3.3:+63647855 MS.gene35631:CDS
AGGACCACCGGTTGCTATGC+AGG 0.447478 3.3:+63648092 MS.gene35631:CDS
TACGAATGGATGCCAAACTC+TGG 0.447858 3.3:+63649513 MS.gene35631:CDS
GCAAGAGGGGTTATACAAAC+AGG 0.448418 3.3:+63645584 MS.gene35631:CDS
GGTCTCTAGATTCCACAATC+TGG 0.448705 3.3:+63642452 MS.gene35631:intron
CAAAGTCCTCAGCGAGAGAA+AGG 0.449526 3.3:+63644181 MS.gene35631:CDS
ACTGCTACTGCTACAGTCTT+CGG 0.449630 3.3:-63644299 None:intergenic
CGATATGAACAGACAAGAAC+TGG 0.449895 3.3:+63647243 MS.gene35631:CDS
TGAAATTAGGTCCATTCAAG+AGG 0.450379 3.3:+63643950 MS.gene35631:intron
TGCGAAGATGGAGTTACAAA+TGG 0.450901 3.3:+63644810 MS.gene35631:CDS
GAGAACTATACATTTGACTT+TGG 0.451719 3.3:-63647851 None:intergenic
AGTCTTAAAAGCACAATGTC+TGG 0.451884 3.3:+63644133 MS.gene35631:CDS
TGAGCTTGAGGTTGCAAGGC+TGG 0.453023 3.3:+63647768 MS.gene35631:CDS
AATCAGATAATGAGTTGATA+AGG 0.454672 3.3:+63647920 MS.gene35631:CDS
AGATCCCACCCTTGCTATGA+AGG 0.454736 3.3:+63644942 MS.gene35631:CDS
TTACCTCTGGCTGCATATTG+AGG 0.455671 3.3:-63648644 None:intergenic
CTCCTCTGTAATTGCTGCTA+AGG 0.455840 3.3:-63646684 None:intergenic
TCAAACTTTGAGCTAAAGCC+AGG 0.457883 3.3:-63649576 None:intergenic
TGCATATATGCAATTTCTGC+TGG 0.459105 3.3:+63645138 MS.gene35631:CDS
TGACCTGTTAAAGGCTGAAA+AGG 0.459813 3.3:+63648371 MS.gene35631:CDS
TGACTACTTAAAATCTGAGT+TGG 0.460204 3.3:+63647621 MS.gene35631:CDS
TCCTTTCATAGACAACATTT+GGG 0.460769 3.3:+63645519 MS.gene35631:CDS
AGCTTTGGAGTTGTCTCTCC+AGG 0.461208 3.3:+63646712 MS.gene35631:CDS
TTCTGCTGGTAAGAACGAAA+TGG 0.461357 3.3:+63645152 MS.gene35631:CDS
TGTGGCAACATCAGACCTTA+AGG 0.462236 3.3:+63647687 MS.gene35631:CDS
CCAGGCTCACTTCCGTTAAG+AGG 0.463458 3.3:-63643270 None:intergenic
ATCTATGGGATTACCTGAAA+GGG 0.463662 3.3:+63644675 MS.gene35631:CDS
TGTGGTGGAAACTGATTGTC+AGG 0.463680 3.3:-63644211 None:intergenic
GATTCTCCTTCGAGTGAAGA+AGG 0.464471 3.3:-63644007 None:intergenic
TTCCACCACAGGACAATGCT+TGG 0.465320 3.3:+63644224 MS.gene35631:CDS
TCTGAGAATTGCATTTATCA+AGG 0.465435 3.3:+63648119 MS.gene35631:CDS
AACTCATGAGCCACAAGGCC+AGG 0.467284 3.3:-63644910 None:intergenic
CTACTTAAAATCTGAGTTGG+AGG 0.468304 3.3:+63647624 MS.gene35631:CDS
CAAGCAACTGGTGACAGACT+TGG 0.473421 3.3:+63647273 MS.gene35631:CDS
CATGTGTAGCATGGAATTGA+AGG 0.473685 3.3:-63640699 None:intergenic
AAAGTTTACAAACTTGTTGT+GGG 0.473879 3.3:+63642635 MS.gene35631:CDS
GAAAGTTTACAAACTTGTTG+TGG 0.473944 3.3:+63642634 MS.gene35631:CDS
TATTAAAACAAGACAATATG+AGG 0.476752 3.3:+63642610 MS.gene35631:CDS
GTGAAGAATCAGAAAGGGTC+TGG 0.477459 3.3:-63645401 None:intergenic
AGCAGTATTCAGAAGTTTCA+GGG 0.477610 3.3:+63651003 MS.gene35631:CDS
ACTGGTCCATCTCAAGCAAC+TGG 0.478257 3.3:+63647261 MS.gene35631:CDS
CGGAAGAGAAAATGCGAAGA+TGG 0.479460 3.3:+63644798 MS.gene35631:CDS
CTTCAGTTCGCGGAAGTTGA+AGG 0.479720 3.3:+63651127 MS.gene35631:CDS
CTGCTACAGTCTTCGGAAGC+AGG 0.479959 3.3:-63644292 None:intergenic
TTCAAGAGGGAAATTGAAAA+GGG 0.481533 3.3:+63643964 MS.gene35631:CDS
AAACAACTTGTCTTCTCTAC+AGG 0.482208 3.3:+63646784 MS.gene35631:CDS
CTGTACCAGAGCTCAGTTTG+AGG 0.482262 3.3:+63647444 MS.gene35631:CDS
CTTGTTGAAAAGATGAGTGC+TGG 0.482367 3.3:+63646497 MS.gene35631:CDS
CTTTCATCCCTGCTGACTCT+GGG 0.482522 3.3:+63642495 MS.gene35631:CDS
TAATAAGTTGCAGAAATTAG+TGG 0.483743 3.3:+63646157 MS.gene35631:CDS
CCTCTCGTTAAAGGAGTACA+AGG 0.489406 3.3:+63645809 MS.gene35631:CDS
TGATTATTAACATTCTGGTC+AGG 0.490727 3.3:-63643744 None:intergenic
TCCACCACAGGACAATGCTT+GGG 0.492022 3.3:+63644225 MS.gene35631:CDS
TTACAAACTTGTTGTGGGGA+TGG 0.493629 3.3:+63642640 MS.gene35631:CDS
CCATTCCTTATCCCCACACT+AGG 0.494528 3.3:+63651231 MS.gene35631:CDS
AAATCAATCCAATGAGTCAC+TGG 0.494627 3.3:+63645755 MS.gene35631:CDS
TCTTCAAGATCTAGCATCCT+TGG 0.496067 3.3:+63643186 MS.gene35631:CDS
TTCTCTGTTTGCAGTTGGAA+AGG 0.499779 3.3:+63649815 MS.gene35631:intron
ATTTCAACTCTCTAGGCAGC+TGG 0.500743 3.3:+63645725 MS.gene35631:CDS
GATTGAGAAAACTAAAGTTA+AGG 0.501725 3.3:+63640666 MS.gene35631:CDS
GATTATGCTGACTCAGCTGC+TGG 0.502092 3.3:+63644043 MS.gene35631:CDS
AGAGACTCCTGCATAGCAAC+CGG 0.505010 3.3:-63648099 None:intergenic
TATTATTTCTTTCTGCAAAG+TGG 0.506980 3.3:-63646063 None:intergenic
TTCCATGGAGACAGAACTAA+AGG 0.507603 3.3:+63651075 MS.gene35631:CDS
CTTGCATTTAAAGTTACGAA+TGG 0.508607 3.3:+63649499 MS.gene35631:CDS
TGGGCATGATTTACAGCAGA+TGG 0.508877 3.3:+63646415 MS.gene35631:CDS
CTTCAACTTCCGCGAACTGA+AGG 0.508892 3.3:-63651126 None:intergenic
AGTCAAGAAATTATAAAGCT+AGG 0.510279 3.3:+63646626 MS.gene35631:CDS
AATCTAGCGATCCAATTTCA+GGG 0.510512 3.3:+63644761 MS.gene35631:CDS
TCTTACTCATAAAATTAATG+AGG 0.511404 3.3:+63645920 MS.gene35631:CDS
TGAGAAAACTAAAGTTAAGG+TGG 0.513271 3.3:+63640669 MS.gene35631:CDS
TGGATATTTCATCATGAAGA+TGG 0.514716 3.3:-63646043 None:intergenic
GTAACCTTCCCAGAGTCAGC+AGG 0.515165 3.3:-63642503 None:intergenic
ATATATTTACAAAATGCATC+TGG 0.515525 3.3:-63645623 None:intergenic
AGTTTATCCCATCCAGATTG+TGG 0.515836 3.3:-63642464 None:intergenic
TACAGTTTAAATGGCATAAG+GGG 0.517234 3.3:+63644611 MS.gene35631:CDS
ATTGCTGCTGAGATATCATC+AGG 0.520128 3.3:+63644439 MS.gene35631:CDS
TCAGTGGCAATGCATTAGAA+AGG 0.520779 3.3:+63650057 MS.gene35631:CDS
TTCGTAACTTTAAATGCAAG+AGG 0.522939 3.3:-63649496 None:intergenic
TTCTCCTTCATAGCAAGGGT+GGG 0.522952 3.3:-63644946 None:intergenic
TAATGTCTAGAGTTACCAAA+TGG 0.524122 3.3:+63640641 None:intergenic
TTCTTGCTTGCAACATTCAA+GGG 0.524750 3.3:-63648409 None:intergenic
TATCTATGGGATTACCTGAA+AGG 0.525221 3.3:+63644674 MS.gene35631:CDS
TGGAAAGTGTCAGCAGAGAT+GGG 0.525309 3.3:+63647800 MS.gene35631:CDS
TGTGGCCTGAATGTTAAGAC+TGG 0.526859 3.3:-63645691 None:intergenic
TACTCATAAAATTAATGAGG+TGG 0.527249 3.3:+63645923 MS.gene35631:CDS
CTTCACTCGAAGGAGAATCA+AGG 0.527969 3.3:+63644011 MS.gene35631:CDS
TTCTAGAGAATTGAATTGCA+TGG 0.529381 3.3:+63647570 MS.gene35631:CDS
TCTTCACTCTCAAACACTGA+TGG 0.530801 3.3:+63645417 MS.gene35631:CDS
CTCACATGTAGTGTGACTCC+AGG 0.532505 3.3:-63643288 None:intergenic
ACAATGCTTGGGCTCATGGT+TGG 0.533143 3.3:+63644236 MS.gene35631:CDS
AAGATGGAGTTACAAATGGA+TGG 0.533782 3.3:+63644814 MS.gene35631:CDS
ACCCAAATGTTGTCTATGAA+AGG 0.535118 3.3:-63645520 None:intergenic
TGCAGAAGCAGCCCTTAAAA+GGG 0.535333 3.3:+63645275 MS.gene35631:CDS
AGCTCAGTTTGAGGGTCATG+TGG 0.536763 3.3:+63647453 MS.gene35631:CDS
CTTCATAGTAGCACTCCATC+TGG 0.537752 3.3:-63645038 None:intergenic
AGAGCTAGCAAAAGCGGTTG+CGG 0.540671 3.3:+63644465 MS.gene35631:CDS
CATCCCTGCTGACTCTGGGA+AGG 0.541648 3.3:+63642499 MS.gene35631:CDS
GCTCGTTATCTCACTGCACC+TGG 0.541669 3.3:+63644892 MS.gene35631:CDS
TGGTTGAGTTGCAGAACCTC+AGG 0.541852 3.3:+63645100 MS.gene35631:CDS
AATGAAGATCTTGGAATTGG+AGG 0.542268 3.3:+63648299 MS.gene35631:CDS
CAGAGGGAACTCAGAGAGAA+GGG 0.542428 3.3:+63643660 MS.gene35631:CDS
GCGCGATGAAAAGAATTTCA+GGG 0.542636 3.3:+63646814 MS.gene35631:CDS
TAACGTGAATGTTCTGAATG+AGG 0.544088 3.3:+63648533 MS.gene35631:CDS
GAAAATATTCGAACTTCTAA+GGG 0.544490 3.3:+63644966 MS.gene35631:CDS
TCATTCTGCGCGCAGACAAG+TGG 0.544526 3.3:+63647495 MS.gene35631:CDS
CTCAAACTGAGCTCTGGTAC+AGG 0.544563 3.3:-63647443 None:intergenic
TAAGGAATGGTCTCTGAAGT+AGG 0.545171 3.3:-63651218 None:intergenic
CTTAATGCTCGTGACAAAAG+AGG 0.546535 3.3:+63648063 MS.gene35631:CDS
CTGAAAGAGAAGGCTTTGTA+CGG 0.547568 3.3:+63645007 MS.gene35631:CDS
AATTATAAAGCTAGGTACTT+CGG 0.548166 3.3:+63646634 MS.gene35631:CDS
GATTTAGGTGTACTATCTCT+CGG 0.549935 3.3:+63644157 MS.gene35631:CDS
ATGACCCTCAAACTGAGCTC+TGG 0.550504 3.3:-63647449 None:intergenic
AAGAACTTGAGCAGAATCAA+AGG 0.550634 3.3:+63645070 MS.gene35631:CDS
AAAGTCCAAAATTGAAGTAG+AGG 0.550949 3.3:+63648473 MS.gene35631:CDS
TCTCACTGCACCTGGCCTTG+TGG 0.552439 3.3:+63644900 MS.gene35631:CDS
CTGTCACCAGTTGCTTGAGA+TGG 0.552492 3.3:-63647267 None:intergenic
TGTACCAGAGCTCAGTTTGA+GGG 0.552554 3.3:+63647445 MS.gene35631:CDS
GCAGAGGGAACTCAGAGAGA+AGG 0.554862 3.3:+63643659 MS.gene35631:CDS
TGGCTTTGACAATCTTCAGT+AGG 0.555393 3.3:-63649859 None:intergenic
TCTAGATTCCACAATCTGGA+TGG 0.556461 3.3:+63642456 MS.gene35631:intron
TAGAGAATTCGAACAGCAGA+GGG 0.557302 3.3:+63643644 MS.gene35631:intron
AACGTGAATGTTCTGAATGA+GGG 0.557807 3.3:+63648534 MS.gene35631:CDS
CTAGATTCCACAATCTGGAT+GGG 0.558043 3.3:+63642457 MS.gene35631:intron
TGAAAAGCAACACCAGCTGC+AGG 0.558469 3.3:+63647048 MS.gene35631:CDS
TCCTGGTAAGCTCATTACAT+TGG 0.559484 3.3:-63647951 None:intergenic
ACCAATGTAATGAGCTTACC+AGG 0.559675 3.3:+63647950 MS.gene35631:CDS
GCAGAATCAAAGGCAGATGA+TGG 0.559944 3.3:+63645080 MS.gene35631:CDS
TGAGAGTGAAGAATCAGAAA+GGG 0.561238 3.3:-63645406 None:intergenic
TGAAAAGCAACACAAGCTGC+AGG 0.561618 3.3:+63647216 MS.gene35631:CDS
AACCTGTTCAGAAAGCCTCC+TGG 0.561619 3.3:-63647968 None:intergenic
AAAATTAGAGACAACAGTCA+TGG 0.562002 3.3:+63647006 MS.gene35631:CDS
TTGAACTATTCTATTGCTGT+CGG 0.563784 3.3:+63645303 MS.gene35631:CDS
TTTATTTCAACCCGAAAGCA+TGG 0.565809 3.3:+63644870 MS.gene35631:CDS
TTGAGAGTGAAGAATCAGAA+AGG 0.567409 3.3:-63645407 None:intergenic
TTCAATAAAATCTCTGTCAG+TGG 0.568804 3.3:+63650041 MS.gene35631:CDS
CTATCCCTCTCCGTCTCAGT+AGG 0.570057 3.3:-63644574 None:intergenic
TATTCTTGATCTAAAACTGA+AGG 0.571425 3.3:+63644354 MS.gene35631:CDS
CAGTGGCAATGCATTAGAAA+GGG 0.572623 3.3:+63650058 MS.gene35631:CDS
CCAAACTCTGGGAACTGAAG+AGG 0.572864 3.3:+63649525 MS.gene35631:CDS
AAAATCAGCGAGATCTATGT+TGG 0.573024 3.3:-63643214 None:intergenic
GACCTGGAAAACTTGTCTCA+TGG 0.573341 3.3:-63649879 None:intergenic
CGAACTTCTAAGGGAGCTAG+AGG 0.574403 3.3:+63644975 MS.gene35631:CDS
CCTCGTCCTTCTTCACTCGA+AGG 0.576039 3.3:+63644001 MS.gene35631:CDS
GATCACTTCGATTGCAAGAG+GGG 0.576870 3.3:+63645571 MS.gene35631:CDS
CCTTCGAGTGAAGAAGGACG+AGG 0.579406 3.3:-63644001 None:intergenic
GAAGCATGATACGCATGAAG+TGG 0.580690 3.3:+63644108 MS.gene35631:CDS
AAATGAAGAAAGCAAGCACC+TGG 0.582066 3.3:+63649558 MS.gene35631:CDS
AGAGGCAAAGCAACAGCTGT+AGG 0.583683 3.3:-63643252 None:intergenic
ATGAACCTACTGAGACGGAG+AGG 0.583987 3.3:+63644569 MS.gene35631:CDS
CCTAGTGTGGGGATAAGGAA+TGG 0.585065 3.3:-63651231 None:intergenic
AATTGTACTAAAAGTTCAGA+AGG 0.586528 3.3:+63645456 MS.gene35631:CDS
CAGATTCATCATGACTACCT+TGG 0.586731 3.3:-63643701 None:intergenic
TTTCTCCTTCATAGCAAGGG+TGG 0.587879 3.3:-63644947 None:intergenic
ATAAAAGTAAATGAAGAGCT+GGG 0.588013 3.3:+63648276 MS.gene35631:CDS
GATATTCAGAAAGTATCTAT+GGG 0.588634 3.3:+63644661 MS.gene35631:CDS
ACGAATGGATGCCAAACTCT+GGG 0.589028 3.3:+63649514 MS.gene35631:CDS
GAAACTTGAATCAGATCTTG+AGG 0.589785 3.3:+63646472 MS.gene35631:CDS
TCAGGGACTAAAGTTGTGAA+CGG 0.594505 3.3:+63644778 MS.gene35631:CDS
AGATGGAGTTACAAATGGAT+GGG 0.596537 3.3:+63644815 MS.gene35631:CDS
GGGTTGAAATAAAGCAGCAT+CGG 0.599968 3.3:-63644860 None:intergenic
TGACAATCAGTTTCCACCAC+AGG 0.600238 3.3:+63644213 MS.gene35631:CDS
GAGTCCAAAACTGAAAGAGA+AGG 0.600288 3.3:+63644997 MS.gene35631:CDS
AGGAGAAGAGCTAGCAAAAG+CGG 0.603087 3.3:+63644459 MS.gene35631:CDS
TTAGAGAATTCGAACAGCAG+AGG 0.605412 3.3:+63643643 MS.gene35631:intron
ACCTTAAGGAACACAAGAGT+AGG 0.606768 3.3:+63647701 MS.gene35631:CDS
AAGTAGAATGTTCATTCCTG+AGG 0.607414 3.3:-63645116 None:intergenic
AAGATCTAGCATCCTTGGTG+AGG 0.608701 3.3:+63643191 MS.gene35631:CDS
GAAATTAGGTCCATTCAAGA+GGG 0.609965 3.3:+63643951 MS.gene35631:intron
AAAGACAAGACATTCTTCCA+TGG 0.611002 3.3:+63651060 MS.gene35631:CDS
CCTTGTACTCCTTTAACGAG+AGG 0.611316 3.3:-63645809 None:intergenic
CTACAAACAACCTCTGACCA+AGG 0.613390 3.3:+63643684 MS.gene35631:CDS
AAGATCACTTCGATTGCAAG+AGG 0.613447 3.3:+63645569 MS.gene35631:CDS
TGAACAGGTTCTTAAGACAG+AGG 0.614044 3.3:+63647981 MS.gene35631:CDS
AGATCACTTCGATTGCAAGA+GGG 0.616277 3.3:+63645570 MS.gene35631:CDS
TCTCATGCATAGAAAGAACC+TGG 0.618986 3.3:-63645359 None:intergenic
ATCATGACTACCTTGGTCAG+AGG 0.620746 3.3:-63643694 None:intergenic
AAGTTTACAAACTTGTTGTG+GGG 0.621362 3.3:+63642636 MS.gene35631:CDS
AGTGTGAGCTTGAGGTTGCA+AGG 0.623156 3.3:+63647764 MS.gene35631:CDS
TGTACGGAAAATGGACCAGA+TGG 0.623403 3.3:+63645023 MS.gene35631:CDS
GTCAAATGTATAGTTCTCCA+GGG 0.624594 3.3:+63647856 MS.gene35631:CDS
GCTTCTCCTTTCTCTCGCTG+AGG 0.625158 3.3:-63644187 None:intergenic
GAATGGTCTCTGAAGTAGGT+CGG 0.625729 3.3:-63651214 None:intergenic
AAGAGGACATGAAGGACCAC+CGG 0.626032 3.3:+63648080 MS.gene35631:CDS
ACTAATTGATCAAAATAGTG+TGG 0.631760 3.3:+63647669 MS.gene35631:CDS
AGCATAGTGAGGAAATGCTG+TGG 0.633202 3.3:+63648196 MS.gene35631:CDS
TCGCAATGAACCTACTGAGA+CGG 0.634825 3.3:+63644564 MS.gene35631:CDS
TGAAAGAGAGTGTGAGCTTG+AGG 0.637715 3.3:+63647756 MS.gene35631:CDS
TAACCTTCCCAGAGTCAGCA+GGG 0.638289 3.3:-63642502 None:intergenic
CATTCCTTATCCCCACACTA+GGG 0.638859 3.3:+63651232 MS.gene35631:CDS
AAACAAGCAGAACTACTACA+AGG 0.642243 3.3:-63646212 None:intergenic
CATTGAGCACCTGAATAAGG+AGG 0.642782 3.3:+63649606 MS.gene35631:CDS
GCCCAAGCATTGTCCTGTGG+TGG 0.642974 3.3:-63644226 None:intergenic
GGAAAGTGTCAGCAGAGATG+GGG 0.643881 3.3:+63647801 MS.gene35631:CDS
AGTCTAGCATCCAATTTCAG+AGG 0.647883 3.3:+63650129 MS.gene35631:CDS
TGAACCTACTGAGACGGAGA+GGG 0.651520 3.3:+63644570 MS.gene35631:CDS
CGTGACAAAAGAGGACATGA+AGG 0.653825 3.3:+63648072 MS.gene35631:CDS
TCAGTTTGAGGGTCATGTGG+AGG 0.655134 3.3:+63647456 MS.gene35631:CDS
GACTCCTGCATAGCAACCGG+TGG 0.665256 3.3:-63648096 None:intergenic
AATCAAACTCATGAGCCACA+AGG 0.666174 3.3:-63644915 None:intergenic
AGTGTCAGCAGAGATGGGGA+AGG 0.671101 3.3:+63647805 MS.gene35631:CDS
CTTCGAGTGAAGAAGGACGA+GGG 0.677778 3.3:-63644000 None:intergenic
AATCCTCAATATGCAGCCAG+AGG 0.679292 3.3:+63648641 MS.gene35631:CDS
AATGTTCTGAATGAGGGCAA+TGG 0.682995 3.3:+63648540 MS.gene35631:CDS
AGAACTGACACAGTTACATG+AGG 0.687924 3.3:+63649909 MS.gene35631:CDS
GACCTTAGCAGCAATTACAG+AGG 0.691473 3.3:+63646682 MS.gene35631:CDS
GAAGGCTTAATTGAGAGTAA+CGG 0.692155 3.3:-63651108 None:intergenic
GATCTATGTTGGCCTCACCA+AGG 0.695108 3.3:-63643203 None:intergenic
TTCTCTTCAGAAATGCAGTG+AGG 0.704213 3.3:+63648449 MS.gene35631:CDS
TGAGAAATGGAACTTGCAAG+TGG 0.722510 3.3:+63642549 MS.gene35631:CDS
TGAGCCCAAGCATTGTCCTG+TGG 0.724262 3.3:-63644229 None:intergenic
AATGTAATGAGCTTACCAGG+AGG 0.794125 3.3:+63647953 MS.gene35631:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.3 gene 63640643 63651252 63640643 ID=MS.gene35631
chr3.3 mRNA 63640643 63651252 63640643 ID=MS.gene35631.t1;Parent=MS.gene35631
chr3.3 exon 63640643 63640720 63640643 ID=MS.gene35631.t1.exon1;Parent=MS.gene35631.t1
chr3.3 CDS 63640643 63640720 63640643 ID=cds.MS.gene35631.t1;Parent=MS.gene35631.t1
chr3.3 exon 63642461 63642661 63642461 ID=MS.gene35631.t1.exon2;Parent=MS.gene35631.t1
chr3.3 CDS 63642461 63642661 63642461 ID=cds.MS.gene35631.t1;Parent=MS.gene35631.t1
chr3.3 exon 63643183 63643305 63643183 ID=MS.gene35631.t1.exon3;Parent=MS.gene35631.t1
chr3.3 CDS 63643183 63643305 63643183 ID=cds.MS.gene35631.t1;Parent=MS.gene35631.t1
chr3.3 exon 63643530 63643567 63643530 ID=MS.gene35631.t1.exon4;Parent=MS.gene35631.t1
chr3.3 CDS 63643530 63643567 63643530 ID=cds.MS.gene35631.t1;Parent=MS.gene35631.t1
chr3.3 exon 63643647 63643776 63643647 ID=MS.gene35631.t1.exon5;Parent=MS.gene35631.t1
chr3.3 CDS 63643647 63643776 63643647 ID=cds.MS.gene35631.t1;Parent=MS.gene35631.t1
chr3.3 exon 63643959 63648662 63643959 ID=MS.gene35631.t1.exon6;Parent=MS.gene35631.t1
chr3.3 CDS 63643959 63648662 63643959 ID=cds.MS.gene35631.t1;Parent=MS.gene35631.t1
chr3.3 exon 63649493 63649627 63649493 ID=MS.gene35631.t1.exon7;Parent=MS.gene35631.t1
chr3.3 CDS 63649493 63649627 63649493 ID=cds.MS.gene35631.t1;Parent=MS.gene35631.t1
chr3.3 exon 63649829 63649930 63649829 ID=MS.gene35631.t1.exon8;Parent=MS.gene35631.t1
chr3.3 CDS 63649829 63649930 63649829 ID=cds.MS.gene35631.t1;Parent=MS.gene35631.t1
chr3.3 exon 63650008 63650150 63650008 ID=MS.gene35631.t1.exon9;Parent=MS.gene35631.t1
chr3.3 CDS 63650008 63650150 63650008 ID=cds.MS.gene35631.t1;Parent=MS.gene35631.t1
chr3.3 exon 63650973 63651252 63650973 ID=MS.gene35631.t1.exon10;Parent=MS.gene35631.t1
chr3.3 CDS 63650973 63651252 63650973 ID=cds.MS.gene35631.t1;Parent=MS.gene35631.t1
Gene Sequence

>MS.gene35631

ATGTCTAGAGTTACCAAATGGAAGATTGAGAAAACTAAAGTTAAGGTGGTTTTTCGCCTTCAATTCCATGCTACACATGTAAGTTTTTTATATTCTACAATTTTTTTACTTCGTTTTTTGGTTTGGTAATTTAAATTTTTCAAGTAGATAAGGAATTTAGTTTCACGCGTAACTTGACTTGTTATATGAACTAGAGAAATTCAATCTGCAACTCAAACATGACCAGTGTGCACTGCACAATTCATCAAAGTTGCCATTTAAGCTTAAATCTGAGAATTTATTCAAAATCCAGTTGGCATTATGTTATACTCTGCATATTTGTTATCAATCTTATGTTCCAACCGATTTGTAAACTTCTTTTCTTCAGTATAGTATTTAATTATCAATTTCTATAGAATTTTCAATTTTTATATTGCATTCATTAGACATAAGTGGGTCAATTAACCTATAACCTACTTTTCAAATATATTCGTGAAAAGAAAAACTAAACAAGAGAAGCAGAGGGTCAAGCAAGCTGTTTAAAAGTAAAGTGACAAACTTTTCAGTGGCTGTGGCCCCTAACAATATATAAAAAGTGAAATTAATGGCTCATATTCTATACTAATCATGTGATGGCTCAATCTTCTGTGTTTGACACTGGTTCTAAACTTCTATGTTAAGACCAAAATGATTTTCTGTAACATTTCTAGGTTTATACAAACATAGAATAAGATTTAAAATTCTTGACCAAATTTAGCAGACCGAAGCAGTTATTAGGTTCAACTTTCTCCTGACTTGCTGAAAAGTTAATCAAGCTCTAGATAACACAGAATAAAGGGAAATTGGAATAGCTAGTTTGGAACTGGTAGGATATATAGAATAAAGGGAAATTGGAATAGCTAAAGTAAAGTATTTAAGAGTTGTTAGAGTAGTTAGTTAATTGACTAGTTAGAGAGTATTTGTATAAATATCAGAATACAAGGATAGAGATCATTATTGAGTATTTTAGACATTGTGAATAGAGTAGGGACTCTATTGTGAAGGGGGAAAGCCTTGGAGGATAGATTTCTCTCATATTCGCTCTTATCCTTTCTCAATCTTTCAATAAAACTGAACCTCATGCTCAGTCACCAACTAAAACCAATTCATCTTTGTCGCCAGTGTTTGAATGGTGGAAACAGAAGCCAAGAACGATGGCGAGTCTAGTAGAGCCTTGGAGGAAAAAGAATTCGAGTCTAAGAAGGAATGAGAATCTGATACCCTAGTTAGAGATGGTTCTATTCACAATAATGATCTCTATCCGTGTATTCTCCTATTTATACAAATACCCCCTTAACTGATTCGTTAGCTAATTAAATAACTACTCTAACAACTCTTAACTACTCTAATCTCCCTTTATTCTATATATTCTATCTGGAACTCATTTGTATTAGTTATTTCAAAAAATTTCCAACCTCTTTCTTGATTATGTGCCATTCGAAAATGTCATCTTGAGAATGTAACATGACTGAAGTAACTTCAAGTTCAATATATGCTGACATGGCCCATAATATTGTCAGCACTCAACATTAAACTTATTGGCCCTTTTTTGGGTGATACCTTGGAGAATTATTTTATTTGAGCAGTCACCATGATTAATTAATTTATTTAAGTAGTTTATATTAAATCAAGGCAATGGATTGTGGAAATACAACTTTGCCGAATCTTCATGACATAAGTCTATGTTTAATCAACTTTACTTTTTTACAGAGTTATTGTTATTACTGACATTTACATAGTTGTAGACCTATCTTTTTATGCAATTAATGACGGTAAATTTTGTTTTTGCATGGTCTCTAGATTCCACAATCTGGATGGGATAAACTGTTTATCTCTTTCATCCCTGCTGACTCTGGGAAGGTTACATCAAAAACAACCAAAGCAAATGTGAGAAATGGAACTTGCAAGTGGTCAGATCCAATCTATGAAACTACAAGACTCCTTCAAGATATTAAAACAAGACAATATGAGGAGAAAGTTTACAAACTTGTTGTGGGGATGGTAACGTTCTTTTCTGACTTTTAAATGTGTACAAACTATTCTGCCGTAGCATTTATAGAAGTTTAACATGTGAAAACAGAATCGCAGCTCAACAATACTAATCACATTGTTTACAGCTTTATGCAAAATCCTCCATTATATTGCTTATATTCATGGTGTATATTGAATAAGCCTTATTTCTGGGTCTTTTACAGTATCTATACTTTGAGGTCTTGATTATATTCTCTAGAAGTGAGATGCAATAATCAGTGATACTTCTGATTCATTCTTTTTTATGTATTAAGTTTATTGTTCAAAATAACTAGATTTTGACTGTTAATAATAAAATATCGTTTATAATGTAAAGAACAACAGCTTCATAGTATTTGTAAAATTGAAGTTTCATAACAACTTTGTTGCTGCCGGCCACCATTAGAAATGCCTAAGAATTGTCTGTGTTTTCATTTAAGAGATTCTAGTAGCTATTAGTCTTGAGAGAGGTTAGAACTTTTCTAACTTTATTTTTTCCTTAACCAATTCAGGGCTCTTCAAGATCTAGCATCCTTGGTGAGGCCAACATAGATCTCGCTGATTTTGTTGATGCGTTGAAGCCTACAGCTGTTGCTTTGCCTCTTAACGGAAGTGAGCCTGGAGTCACACTACATGTGAGGATCTCTGAACTTCATTTTCTCTGAAGTGGTTTTCCTGTGTTTACCCTTTCATTCCTTATGTAATTATACAAATGTGTTTCGGCACAACTACTAGATGCATTTCTGTTTCCTTGGCATTAATATATCACACAGGCCTAATTGTTAAGAGTTCTTTAGCTGCTTAAGATATCATTGGTGTCATATTTAATGTTTTTTTTCTTCTCATTGTTTGAAGCCAGGTTGCAGTGCAGCTTCTCACTTCCAAAACTGGTTTTAGGTACATTACTGTGAATTATGACATTTAAGGATTTGCTTTAGCTGGACACTATACTTATTTAAGTTATTTTTGCTTTTAGAGAATTCGAACAGCAGAGGGAACTCAGAGAGAAGGGTCTACAAACAACCTCTGACCAAGGTAGTCATGATGAATCTGCTGATAGCAAAGATTCATCTCCTGACCAGAATGTTAATAATCACATTAATAAGGTTTCTTACCTTCTCTCCTCACAAGCGTACTCTATATATAAATATATTATACATATCTGTTGTTTAAATTTCATTTTCTTCTCTTATTCTCTGTTAGGATATAGAATAAAGGAGAATTAGTCATGGATGTTGGTTAGTTATTGGATTCCTAACATTCTCCTTTGTTTATTTAATGAAATTAGGTCCATTCAAGAGGGAAATTGAAAAGGGAATCAAAATATCTCCCTCGTCCTTCTTCACTCGAAGGAGAATCAAGGTTAAATGAAGATTATGCTGACTCAGCTGCTGGATTTGATGGCTCTTCTACTACTTCTGAAAGTGTGTATACTGAGAAGCATGATACGCATGAAGTGGAAAGTCTTAAAAGCACAATGTCTGGTGATTTAGGTGTACTATCTCTCGGACAAAGTCCTCAGCGAGAGAAAGGAGAAGCACCTGACAATCAGTTTCCACCACAGGACAATGCTTGGGCTCATGGTTGGAGCATAGACCATTCAGCTGCAAATAATTTGGCTCCTGCTTCCGAAGACTGTAGCAGTAGCAGTCTTAAAGGAAATTTAGAAGCAGTTGAGTCATCTATTCTTGATCTAAAACTGAAGGTGAGCTGTTTGCAAAATCATTCTGATGAAATTGGTGTTGAAACAAAACTTTTTTCTGAGCAAATTGCTGCTGAGATATCATCAGGAGAAGAGCTAGCAAAAGCGGTTGCGGTACTAAAATCAGAATGTTCAAAGTTTAAAGATGAATTTGAGCAGCTTAAAAGTTCTAAGTTAAGCTTAGCATTTGCTCGCAATGAACCTACTGAGACGGAGAGGGATAGATTATTTCATAATTTACAGTTTAAATGGCATAAGGGGCTTTTGCTCATGGAAGATAAGTTAAGAGATATTCAGAAAGTATCTATGGGATTACCTGAAAGGGATTTTAGGTTCTTTAACTTGGAGTTAGAGAGAGTAGTTGAGATTTTGCAGGATCTCAAACAAGAATCTAGCGATCCAATTTCAGGGACTAAAGTTGTGAACGGAAGAGAAAATGCGAAGATGGAGTTACAAATGGATGGGCAATTTTTAACAGATATTGGGTCCGATGCTGCTTTATTTCAACCCGAAAGCATGGCTCGTTATCTCACTGCACCTGGCCTTGTGGCTCATGAGTTTGATTCTGTAGATCCCACCCTTGCTATGAAGGAGAAAATATTCGAACTTCTAAGGGAGCTAGAGGAGTCCAAAACTGAAAGAGAAGGCTTTGTACGGAAAATGGACCAGATGGAGTGCTACTATGAAGCTCTTATTCAAGAACTTGAGCAGAATCAAAGGCAGATGATGGTTGAGTTGCAGAACCTCAGGAATGAACATTCTACTTGCATATATGCAATTTCTGCTGGTAAGAACGAAATGGAGAAAATGCACCAAAATATGAATGAGCAGATAATGAAATTTTCTGAAGATAGGCGCATTTTGGAATCTCTCAACAGCGAGTTTGAAAAAAGGGCTACTTCTGCAGAAGCAGCCCTTAAAAGGGCTAGATTGAACTATTCTATTGCTGTCGGTCAATTGCAAAAAGATCTTGAACTTCTTTCTTGCCAGGTTCTTTCTATGCATGAGACAAATGAGAATCTCATAAACCAGACCCTTTCTGATTCTTCACTCTCAAACACTGATGGTTTCCCAGAACTAGTGAATTGTACTAAAAGTTCAGAAGGTCATGCTTCTAATCAATTGCTACGACAAAATCACAGTTCTTCCTTTCATAGACAACATTTGGGTGAAGACGTTTTACTAAGCGATTTGAAAAGATCACTTCGATTGCAAGAGGGGTTATACAAACAGGTTGAAGAAGAAATCTGCCAGATGCATTTTGTAAATATATACTCAGATGTGTTTTCTAAGGCTCTGCAAGAAACATTGCTTGAAGCCAGTCTTAACATTCAGGCCACAGAACGTGAAAAATTTCAACTCTCTAGGCAGCTGGAGCTTTCAAATCAATCCAATGAGTCACTGGTTCTTAGGTTGCAGAACGCTATGAATGATATCCTCTCGTTAAAGGAGTACAAGGAGATTTGCATAGCAAAGAGCAATGATCTTACTCACCAGAACCAAATTTTAGAGGCAAATTTAAAAGATCTTGGTCATGAAAACAATCTTCTTACTCATAAAATTAATGAGGTGGAAGTCCTTTTGACAGATTATAGAAGTAAATACGTTGCATGCAGTGCAGAGAACTCAGAGTTGAATAACTTATTGAAAAAAGAGAGCCTAGAAAATGACCATCTTCATGATGAAATATCCACTTTGCAGAAAGAAATAATATCTTTCAGAACTAAATTTGATGTGCTGGACTCCATGAATAATGATCTGCAAAATAAAGCCATGTTTTTGTCTAATAAGTTGCAGAAATTAGTGGCATCATATGATGATAGATGCACTGAACTTTCTCCTTGTAGTAGTTCTGCTTGTTTGGATTCAGAATGCAAAGACTTAGAAATTTTGTTATTGCAACTAGAAGAGCAGCAACGTAATGCTTTTGATAGGATCTTGGTACTCGTTGAAGAGAAGAAAACTTTAGTGCACGAAAAACAAATGGCTCAAGTATCTTTAAGCACAGCAGAATCAGATGCTCTTGTCATGAAACAGAAGTTTGGGCATGATTTACAGCAGATGGCAAGCAACATAAGTGTGTCTAGTATCCAGTTGCAGAAACTTGAATCAGATCTTGAGGTGCTTGTTGAAAAGATGAGTGCTGGTTTTAAATCTGAAGAAAGATATTCTCAGCAACAGTATGAATTGTTGTCTAGTTTTAATCATTTGGAGGCTGAACTTCAGCAACTGAATTCCCGAAATCAGGATCTTAGTCAAGAAATTATAAAGCTAGGTACTTCGGCTAGTGATCTTGAAATGTGTAAGCTGACCTTAGCAGCAATTACAGAGGAGAAGAAAGCTTTGGAGTTGTCTCTCCAGGACAAAACAGAAGAATCTGCCAAGATTTCATCTGAGATTAATTTTTTGAAAAACAACTTGTCTTCTCTACAGGATGAGTTGCGCGATGAAAAGAATTTCAGGGAAAAATCGGAGAAAACAGTCTTAGATCTTACAACAGAATTGAATGAAAAACAACAGCAGCTGCAGGACAAAACAGAAGAATCTGCAAAGATTTCATCTGAGATTAATTTTTTGAAAAACAACTTGTGTTCTCTGCAGAATGAGTTGTGTGATGAAAAAATCTTCAGAGAAAAATTAGAGACAACAGTCATGGATCTTACAACCGAATTGAATGAAAAGCAACACCAGCTGCAGGACAAAACAGAAGAATCTGCAAAGATCTCATCTGAGCTTATTTTTTTGAAAAACAACTTGTGTTCTCTGCAGAATGAGTTGTGTGATGAAAAAATCTTCAGGGAAAAATCGGAGAAAACAGTTATAGATCTTACAGCAGAATTGAATGAAAAGCAACACAAGCTGCAGGATTCCGATATGAACAGACAAGAACTGGTCCATCTCAAGCAACTGGTGACAGACTTGGAATCTGAGAGATCGAGAATCGTAGATCTTCTGCAGATATCTGAGAAACGTCTTGAAGATGCTTTAAAGGAATCTTCTTCTATTAGTTATCTGGAAACACACTTATCTGAAATGCATGAATGTTCAATAGCTACTGATGTCGTTATGACCTGTACCAGAGCTCAGTTTGAGGGTCATGTGGAGGAACTTGCTGAGAAACTTCATTCTGCGCGCAGACAAGTGGATGTGCTATGTGAGAAGAATCTTGATTTAGAATCTGAATTGAATGCTTGTCTTTCTAGAGAATTGAATTGCATGGAAGAAAATATGACACTGTCGACAAGTCTTGACTACTTAAAATCTGAGTTGGAGGTCTATACTGCTCAGTGTAGAGCACTAATTGATCAAAATAGTGTGGCAACATCAGACCTTAAGGAACACAAGAGTAGGACAGAAAATGTCAGCAATTCTTCTTACTTGCGTGAAAGAGAGTGTGAGCTTGAGGTTGCAAGGCTGGAGCAATTGCTGGAAAGTGTCAGCAGAGATGGGGAAGGACTGTTTTTGTCCAATGAAGAAGCCAAAGTCAAATGTATAGTTCTCCAGGGAAAACTGGATGAACTGAAAACTGCAATTACTTCACTGCAACAATCAGATAATGAGTTGATAAGGCTGCAGAACCAATGTAATGAGCTTACCAGGAGGCTTTCTGAACAGGTTCTTAAGACAGAGGAGTTCAAGAATTTGTCTACTCATTTGAAGGAACTGAAAGACAAAGCTGAAACTGAGTGTCTTAATGCTCGTGACAAAAGAGGACATGAAGGACCACCGGTTGCTATGCAGGAGTCTCTGAGAATTGCATTTATCAAGGAACAGTATGAAACTAAGTTGCAAGAAATAAAACAACAACTGTCTTTGTCAAAAAAGCATAGTGAGGAAATGCTGTGGAAACTACAACATGCAAGTGAAGAAACTGAGAATAGAAAAAAGTCTGAAGATGCTCAAATAAAAGTAAATGAAGAGCTGGGAATGAAGATCTTGGAATTGGAGGCTGAGTTACAGGCTGTAATTTCTGACAAACGCAATTTGTTAAATGCTTATGACCTGTTAAAGGCTGAAAAGGAGTGCTCAGTGATATCCCTTGAATGTTGCAAGCAAGAAAAACAAGAACTTGAAGCTTCTCTTCAGAAATGCAGTGAGGAAAAGTCCAAAATTGAAGTAGAGGTTACTGTTTTGAAGGAATCAATTGAGACTTTGAAATCTAACGTGAATGTTCTGAATGAGGGCAATGGCACATCCTCTTTATTAAATGCTCAAGAAAAATCAAAGTCTGCAGTTTGCAGCAGTCATGAACCAGAGAGTGCAAATTCAATCCTCAATATGCAGCCAGAGGTAACTGACTGTTTTATTTTGGCTTAATAGCAGTTTTCGCCCCCTAACTTTCACGAAGTTGCGATTTTGGCCCCATAAGAAAAAAAACTACAAAACCGCCCCCTAAGTTTTGCAACTGTAGCAGTTTTGGCCCCCCAAGGCAAAAAAAAAAAAAAAAACACGTGGCACCACACTTAGGTGCCACGTCAGCGTAGACGAGTCAAAATTGGCTTTGGGGGCCAAAACTGCCACATGTGCAAAACTTAGGGGGCGGTTTTGTAGTTTTTTTTCTTAGGGGGCCAAAATCGCAACTTCGTGAAAGTTAGGGGGCTAAAACTGCTATTAAGCCTATTTATTTTTATAAAACATTTTTAATTATCAATTATTATCGAAATCACATGTTTTCTAGGATGATTAAATTTATCGCTTCGTACGACATTCTCTAGAGGAAGAATGGGGAATCTATGTGTGTGTGTGTATACACACAAACACACAAATGTAAATAAAGTAGTTGTTATACTCACACACACACAAATGTAAATAAAGTAGTTGTTATGTAAGTTTTTAGAGTTCGAACCCTGGACCTTTTAGCTAGAACTTCTACTTCAGCCCACTAACTCAGCTGTTTGCTAGGAACATGTGATGAAGTTTTGGAACCAGTTATCATTTCTTCCTTGTTTTCTTTACCATTTGCCTTTATTTCCCATTTGTTCTCAAACCTAGTCTTACATTAACTCTGAGGAAAAGGTTATGTGCATTCTCTTAATGAAATATCAAAAGTACGCCTTCCTTTATTAATCCTGAGTGGCAAGCCTTGACAATTTATTTACATAACTGTTTGATAGGATCAGGATCCTCTTGCATTTAAAGTTACGAATGGATGCCAAACTCTGGGAACTGAAGAGGACTTGCAGCAAAATGAAGAAAGCAAGCACCTGGCTTTAGCTCAAAGTTTGAAATCTAGCATTGAGCACCTGAATAAGGAGGTAATTTTTTAAGATGCGCAAACATGTTACGTTTCAGTGTTTGTCCATTTTCACCTATTCTAGTTACCATTACTCTTTCCTTTATTTCTGATTTCAATTTTCATGCTTGCTCTTTATTTCTGATAACCTGGTCCTTCAGTTGCTACTATTATATTATGTCTGATGTAAATATGATATTTATGTTTTGTTCTCTGTTTGCAGTTGGAAAGGATGAAAAACGATAATATGCTTCCTACTGAAGATTGTCAAAGCCATGAGACAAGTTTTCCAGGTCTGCAAAGAGAACTGACACAGTTACATGAGGTAAATAACTTTTGTTGCCTTGTTTACTATGAAAGATTCCTTCGTCTAGATTCTTATTAATTCTGTACTTTGATCAGGCCAATCAAGAGTTAGGAAGCATGTTCCCTGTGTTCAATAAAATCTCTGTCAGTGGCAATGCATTAGAAAGGGTGCTTGCTTTGGAGATTGAGCTTGCTGAAGCATTGCAAGCCAAGAAGAAGTCTAGCATCCAATTTCAGAGGTACATTCTTCTTTACAAAAGTAATATCTGATAAATACTGTTGCATTTCTAAGCACTTCACCTTAAGATTTTATTAGTTAGTTAGTTTCATAATTGTTAGCTATAAATCTATTATTCTGTTTTAGGAAAGTTGTTAGTGGAGAATTTTTGCTGATAACATATTGGACTTGAATCAGAAAGAATGATTTGTATTAATTGAATGGAACTAAAATGAGAGTTGGTATAAATAACCAACCAACTGACTAAAACATAATAACAGATTTATGACTAACTAACTAACAATTATGCAACTAACTAATACCACCTTTTATTTTTATAAAATTAAAATGTGATAAATAGTACAATACTTACTTTAATCAGCAAAAGCTTCCCCCACTTCAGTTTCATGCTGAAAATGTGTGGAACACCAAAACCAATTGGTTCCAAATACTAAAATTTGAATGCAACAAGTTGGAGTAATTGTTCGGTTCTAGAGCTTAGAGAATCCCAATTATAGCAAGTTTCAATAAGAATGGATGTAATACGGTGGAATATACAAGAATCTGTATATTACTTATTTACTCAAAATAAAACCATAGACATGACAAATACCTACTCATTGTTTTGGAGTGTTTCTTTCTGACTGGTTCTACTATCAAATATTTACTTTAAGGAAAATTCTATCATTAATGTTAAATTTTAAGTTTACCACTTATTTGTTAATGGATAAATGCAATATTGTTGACTTTGTTACATGTTCACATGCATGCACATGTAATATAAAATTGCACTAAGACCATTCAACCACAATGTTTGAGACATTTTTTTTTTCCAATGTTCCAGTTCTTTCACGAAGCAACACAGCGATGAAGAAGCAGTATTCAGAAGTTTCAGGGATATCAATGAGCTAATCAAAGATATGTTAGAACTAAAGACAAGACATTCTTCCATGGAGACAGAACTAAAGGAGATGCACGACCGTTACTCTCAATTAAGCCTTCAGTTCGCGGAAGTTGAAGGTGAGAGACAAAAACTGATGATGACTCTTAAGAATACTCGAGCATCCAAAATGGCTCCGAATTCTCCGACCTACTTCAGAGACCATTCCTTATCCCCACACTAG
Protein sequence

>MS.gene35631.t1

MSRVTKWKIEKTKVKVVFRLQFHATHIPQSGWDKLFISFIPADSGKVTSKTTKANVRNGTCKWSDPIYETTRLLQDIKTRQYEEKVYKLVVGMGSSRSSILGEANIDLADFVDALKPTAVALPLNGSEPGVTLHVAVQLLTSKTGFREFEQQRELREKGLQTTSDQGSHDESADSKDSSPDQNVNNHINKVHSRGKLKRESKYLPRPSSLEGESRLNEDYADSAAGFDGSSTTSESVYTEKHDTHEVESLKSTMSGDLGVLSLGQSPQREKGEAPDNQFPPQDNAWAHGWSIDHSAANNLAPASEDCSSSSLKGNLEAVESSILDLKLKVSCLQNHSDEIGVETKLFSEQIAAEISSGEELAKAVAVLKSECSKFKDEFEQLKSSKLSLAFARNEPTETERDRLFHNLQFKWHKGLLLMEDKLRDIQKVSMGLPERDFRFFNLELERVVEILQDLKQESSDPISGTKVVNGRENAKMELQMDGQFLTDIGSDAALFQPESMARYLTAPGLVAHEFDSVDPTLAMKEKIFELLRELEESKTEREGFVRKMDQMECYYEALIQELEQNQRQMMVELQNLRNEHSTCIYAISAGKNEMEKMHQNMNEQIMKFSEDRRILESLNSEFEKRATSAEAALKRARLNYSIAVGQLQKDLELLSCQVLSMHETNENLINQTLSDSSLSNTDGFPELVNCTKSSEGHASNQLLRQNHSSSFHRQHLGEDVLLSDLKRSLRLQEGLYKQVEEEICQMHFVNIYSDVFSKALQETLLEASLNIQATEREKFQLSRQLELSNQSNESLVLRLQNAMNDILSLKEYKEICIAKSNDLTHQNQILEANLKDLGHENNLLTHKINEVEVLLTDYRSKYVACSAENSELNNLLKKESLENDHLHDEISTLQKEIISFRTKFDVLDSMNNDLQNKAMFLSNKLQKLVASYDDRCTELSPCSSSACLDSECKDLEILLLQLEEQQRNAFDRILVLVEEKKTLVHEKQMAQVSLSTAESDALVMKQKFGHDLQQMASNISVSSIQLQKLESDLEVLVEKMSAGFKSEERYSQQQYELLSSFNHLEAELQQLNSRNQDLSQEIIKLGTSASDLEMCKLTLAAITEEKKALELSLQDKTEESAKISSEINFLKNNLSSLQDELRDEKNFREKSEKTVLDLTTELNEKQQQLQDKTEESAKISSEINFLKNNLCSLQNELCDEKIFREKLETTVMDLTTELNEKQHQLQDKTEESAKISSELIFLKNNLCSLQNELCDEKIFREKSEKTVIDLTAELNEKQHKLQDSDMNRQELVHLKQLVTDLESERSRIVDLLQISEKRLEDALKESSSISYLETHLSEMHECSIATDVVMTCTRAQFEGHVEELAEKLHSARRQVDVLCEKNLDLESELNACLSRELNCMEENMTLSTSLDYLKSELEVYTAQCRALIDQNSVATSDLKEHKSRTENVSNSSYLRERECELEVARLEQLLESVSRDGEGLFLSNEEAKVKCIVLQGKLDELKTAITSLQQSDNELIRLQNQCNELTRRLSEQVLKTEEFKNLSTHLKELKDKAETECLNARDKRGHEGPPVAMQESLRIAFIKEQYETKLQEIKQQLSLSKKHSEEMLWKLQHASEETENRKKSEDAQIKVNEELGMKILELEAELQAVISDKRNLLNAYDLLKAEKECSVISLECCKQEKQELEASLQKCSEEKSKIEVEVTVLKESIETLKSNVNVLNEGNGTSSLLNAQEKSKSAVCSSHEPESANSILNMQPEDPLAFKVTNGCQTLGTEEDLQQNEESKHLALAQSLKSSIEHLNKELERMKNDNMLPTEDCQSHETSFPGLQRELTQLHEANQELGSMFPVFNKISVSGNALERVLALEIELAEALQAKKKSSIQFQSSFTKQHSDEEAVFRSFRDINELIKDMLELKTRHSSMETELKEMHDRYSQLSLQFAEVEGERQKLMMTLKNTRASKMAPNSPTYFRDHSLSPH