Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65172.t1 | XP_003623021.2 | 73.6 | 458 | 100 | 9 | 1 | 455 | 2 | 441 | 6.60E-173 | 617.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65172.t1 | Q9SD53 | 26.3 | 429 | 262 | 13 | 42 | 450 | 61 | 455 | 9.2e-22 | 106.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65172.t1 | G7L3D3 | 73.6 | 458 | 100 | 9 | 1 | 455 | 2 | 441 | 4.8e-173 | 617.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene65172 | 0.83047 | 2.88E-55 | -1.69E-46 |
| MS.gene049159 | MS.gene65172 | 0.81781 | 2.72E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene65172 | 0.803824 | 2.90E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene65172 | 0.810678 | 1.02E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene65172 | 0.838145 | 3.42E-57 | -1.69E-46 |
| MS.gene049585 | MS.gene65172 | 0.80392 | 2.77E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene65172 | 0.814587 | 1.43E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene65172 | 0.804303 | 2.30E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene65172 | 0.836017 | 1.20E-56 | -1.69E-46 |
| MS.gene050020 | MS.gene65172 | 0.814291 | 1.66E-51 | -1.69E-46 |
| MS.gene050137 | MS.gene65172 | 0.822857 | 1.89E-53 | -1.69E-46 |
| MS.gene050253 | MS.gene65172 | 0.805518 | 1.28E-49 | -1.69E-46 |
| MS.gene05045 | MS.gene65172 | 0.809648 | 1.71E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene65172 | 0.80693 | 6.47E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene65172 | 0.864701 | 1.01E-64 | -1.69E-46 |
| MS.gene050808 | MS.gene65172 | 0.826453 | 2.69E-54 | -1.69E-46 |
| MS.gene050826 | MS.gene65172 | 0.829282 | 5.62E-55 | -1.69E-46 |
| MS.gene050901 | MS.gene65172 | 0.809663 | 1.69E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene65172 | 0.80963 | 1.72E-50 | -1.69E-46 |
| MS.gene051180 | MS.gene65172 | 0.812695 | 3.73E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene65172 | 0.806412 | 8.33E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene65172 | 0.860898 | 1.50E-63 | -1.69E-46 |
| MS.gene05125 | MS.gene65172 | 0.810004 | 1.43E-50 | -1.69E-46 |
| MS.gene051265 | MS.gene65172 | 0.844878 | 5.75E-59 | -1.69E-46 |
| MS.gene051279 | MS.gene65172 | 0.817825 | 2.70E-52 | -1.69E-46 |
| MS.gene051388 | MS.gene65172 | 0.829399 | 5.26E-55 | -1.69E-46 |
| MS.gene05155 | MS.gene65172 | 0.815816 | 7.61E-52 | -1.69E-46 |
| MS.gene05157 | MS.gene65172 | 0.821255 | 4.45E-53 | -1.69E-46 |
| MS.gene051594 | MS.gene65172 | 0.80291 | 4.48E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene65172 | 0.808702 | 2.72E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene65172 | 0.889655 | 1.99E-73 | -1.69E-46 |
| MS.gene051720 | MS.gene65172 | 0.891407 | 4.09E-74 | -1.69E-46 |
| MS.gene051744 | MS.gene65172 | 0.83211 | 1.14E-55 | -1.69E-46 |
| MS.gene051800 | MS.gene65172 | 0.806828 | 6.80E-50 | -1.69E-46 |
| MS.gene052000 | MS.gene65172 | 0.801391 | 9.20E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene65172 | 0.837309 | 5.61E-57 | -1.69E-46 |
| MS.gene052463 | MS.gene65172 | 0.80586 | 1.09E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene65172 | 0.809675 | 1.68E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene65172 | 0.802817 | 4.69E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene65172 | 0.812278 | 4.59E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene65172 | 0.806866 | 6.68E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene65172 | 0.811674 | 6.22E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene65172 | 0.822705 | 2.05E-53 | -1.69E-46 |
| MS.gene052673 | MS.gene65172 | -0.818728 | 1.69E-52 | -1.69E-46 |
| MS.gene052773 | MS.gene65172 | 0.807866 | 4.10E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene65172 | 0.823002 | 1.75E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene65172 | 0.836034 | 1.19E-56 | -1.69E-46 |
| MS.gene053144 | MS.gene65172 | 0.827914 | 1.20E-54 | -1.69E-46 |
| MS.gene053164 | MS.gene65172 | 0.858869 | 6.13E-63 | -1.69E-46 |
| MS.gene053221 | MS.gene65172 | 0.81145 | 6.96E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene65172 | 0.831078 | 2.05E-55 | -1.69E-46 |
| MS.gene053331 | MS.gene65172 | 0.801544 | 8.56E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene65172 | 0.842524 | 2.45E-58 | -1.69E-46 |
| MS.gene053592 | MS.gene65172 | 0.802382 | 5.76E-49 | -1.69E-46 |
| MS.gene053641 | MS.gene65172 | 0.803031 | 4.23E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene65172 | 0.813327 | 2.71E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene65172 | 0.81148 | 6.86E-51 | -1.69E-46 |
| MS.gene05422 | MS.gene65172 | 0.804169 | 2.46E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene65172 | 0.828567 | 8.37E-55 | -1.69E-46 |
| MS.gene05423 | MS.gene65172 | 0.848631 | 5.42E-60 | -1.69E-46 |
| MS.gene054467 | MS.gene65172 | 0.83314 | 6.33E-56 | -1.69E-46 |
| MS.gene054584 | MS.gene65172 | 0.831761 | 1.39E-55 | -1.69E-46 |
| MS.gene05458 | MS.gene65172 | 0.833673 | 4.66E-56 | -1.69E-46 |
| MS.gene05468 | MS.gene65172 | 0.847306 | 1.26E-59 | -1.69E-46 |
| MS.gene054775 | MS.gene65172 | 0.853655 | 2.07E-61 | -1.69E-46 |
| MS.gene054801 | MS.gene65172 | 0.855188 | 7.46E-62 | -1.69E-46 |
| MS.gene054991 | MS.gene65172 | 0.80816 | 3.55E-50 | -1.69E-46 |
| MS.gene055144 | MS.gene65172 | 0.838968 | 2.10E-57 | -1.69E-46 |
| MS.gene055227 | MS.gene65172 | 0.817575 | 3.07E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene65172 | 0.818873 | 1.56E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene65172 | 0.81423 | 1.71E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene65172 | 0.805757 | 1.14E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene65172 | 0.829557 | 4.81E-55 | -1.69E-46 |
| MS.gene055465 | MS.gene65172 | 0.856909 | 2.34E-62 | -1.69E-46 |
| MS.gene055466 | MS.gene65172 | 0.859092 | 5.25E-63 | -1.69E-46 |
| MS.gene055468 | MS.gene65172 | 0.843061 | 1.77E-58 | -1.69E-46 |
| MS.gene055469 | MS.gene65172 | 0.828726 | 7.66E-55 | -1.69E-46 |
| MS.gene055537 | MS.gene65172 | 0.82698 | 2.01E-54 | -1.69E-46 |
| MS.gene055580 | MS.gene65172 | -0.80302 | 4.25E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene65172 | 0.836647 | 8.28E-57 | -1.69E-46 |
| MS.gene055778 | MS.gene65172 | 0.800336 | 1.51E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene65172 | 0.838917 | 2.16E-57 | -1.69E-46 |
| MS.gene055926 | MS.gene65172 | 0.847387 | 1.19E-59 | -1.69E-46 |
| MS.gene05604 | MS.gene65172 | 0.81992 | 9.01E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene65172 | 0.822919 | 1.83E-53 | -1.69E-46 |
| MS.gene056173 | MS.gene65172 | 0.8019 | 7.24E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene65172 | 0.800209 | 1.60E-48 | -1.69E-46 |
| MS.gene056308 | MS.gene65172 | 0.842666 | 2.25E-58 | -1.69E-46 |
| MS.gene056366 | MS.gene65172 | 0.822663 | 2.10E-53 | -1.69E-46 |
| MS.gene056545 | MS.gene65172 | 0.801025 | 1.09E-48 | -1.69E-46 |
| MS.gene056553 | MS.gene65172 | 0.835249 | 1.87E-56 | -1.69E-46 |
| MS.gene056859 | MS.gene65172 | 0.825584 | 4.33E-54 | -1.69E-46 |
| MS.gene057012 | MS.gene65172 | 0.801611 | 8.30E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene65172 | 0.805393 | 1.36E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene65172 | 0.838481 | 2.80E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene65172 | 0.838421 | 2.90E-57 | -1.69E-46 |
| MS.gene058010 | MS.gene65172 | 0.800769 | 1.23E-48 | -1.69E-46 |
| MS.gene058087 | MS.gene65172 | 0.807734 | 4.37E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene65172 | 0.822541 | 2.24E-53 | -1.69E-46 |
| MS.gene058339 | MS.gene65172 | 0.83891 | 2.17E-57 | -1.69E-46 |
| MS.gene058360 | MS.gene65172 | 0.811013 | 8.66E-51 | -1.69E-46 |
| MS.gene05847 | MS.gene65172 | 0.830713 | 2.52E-55 | -1.69E-46 |
| MS.gene058515 | MS.gene65172 | 0.810744 | 9.90E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene65172 | 0.834388 | 3.09E-56 | -1.69E-46 |
| MS.gene058647 | MS.gene65172 | 0.815352 | 9.66E-52 | -1.69E-46 |
| MS.gene058852 | MS.gene65172 | 0.809633 | 1.72E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene65172 | 0.80765 | 4.56E-50 | -1.69E-46 |
| MS.gene059272 | MS.gene65172 | 0.80711 | 5.93E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene65172 | 0.827704 | 1.35E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene65172 | 0.804771 | 1.84E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene65172 | 0.80796 | 3.92E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene65172 | 0.845788 | 3.26E-59 | -1.69E-46 |
| MS.gene059713 | MS.gene65172 | 0.811119 | 8.21E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene65172 | 0.817219 | 3.69E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene65172 | 0.803269 | 3.78E-49 | -1.69E-46 |
| MS.gene059937 | MS.gene65172 | 0.819357 | 1.21E-52 | -1.69E-46 |
| MS.gene060137 | MS.gene65172 | -0.837449 | 5.16E-57 | -1.69E-46 |
| MS.gene060167 | MS.gene65172 | 0.80552 | 1.28E-49 | -1.69E-46 |
| MS.gene060503 | MS.gene65172 | 0.804502 | 2.09E-49 | -1.69E-46 |
| MS.gene060519 | MS.gene65172 | 0.837552 | 4.86E-57 | -1.69E-46 |
| MS.gene060587 | MS.gene65172 | 0.831619 | 1.51E-55 | -1.69E-46 |
| MS.gene060637 | MS.gene65172 | 0.817005 | 4.13E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene65172 | 0.803238 | 3.84E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65172.t1 | MTR_7g059810 | 74.728 | 459 | 101 | 6 | 1 | 455 | 2 | 449 | 0.0 | 637 |
| MS.gene65172.t1 | MTR_0182s0060 | 62.906 | 523 | 123 | 4 | 1 | 455 | 2 | 521 | 0.0 | 614 |
| MS.gene65172.t1 | MTR_7g060220 | 73.581 | 458 | 100 | 9 | 1 | 455 | 2 | 441 | 0.0 | 610 |
| MS.gene65172.t1 | MTR_7g060320 | 69.444 | 468 | 126 | 5 | 1 | 453 | 2 | 467 | 0.0 | 603 |
| MS.gene65172.t1 | MTR_7g060310 | 62.525 | 491 | 137 | 5 | 6 | 455 | 8 | 492 | 0.0 | 586 |
| MS.gene65172.t1 | MTR_7g060370 | 67.516 | 471 | 128 | 5 | 6 | 454 | 7 | 474 | 0.0 | 582 |
| MS.gene65172.t1 | MTR_7g060115 | 64.935 | 462 | 145 | 6 | 1 | 455 | 1 | 452 | 0.0 | 573 |
| MS.gene65172.t1 | MTR_7g060840 | 60.000 | 460 | 156 | 6 | 1 | 455 | 1 | 437 | 0.0 | 526 |
| MS.gene65172.t1 | MTR_7g059540 | 59.213 | 483 | 164 | 9 | 1 | 454 | 1 | 479 | 0.0 | 520 |
| MS.gene65172.t1 | MTR_7g059540 | 61.099 | 473 | 161 | 8 | 1 | 454 | 2 | 470 | 0.0 | 517 |
| MS.gene65172.t1 | MTR_7g446270 | 61.284 | 483 | 147 | 9 | 1 | 446 | 1 | 480 | 0.0 | 514 |
| MS.gene65172.t1 | MTR_7g060260 | 62.121 | 462 | 136 | 6 | 1 | 455 | 2 | 431 | 0.0 | 512 |
| MS.gene65172.t1 | MTR_7g060020 | 58.297 | 458 | 159 | 8 | 2 | 455 | 3 | 432 | 1.01e-172 | 492 |
| MS.gene65172.t1 | MTR_7g060160 | 57.987 | 457 | 137 | 6 | 1 | 455 | 1 | 404 | 3.33e-169 | 482 |
| MS.gene65172.t1 | MTR_7g060330 | 52.174 | 506 | 176 | 11 | 1 | 455 | 2 | 492 | 1.21e-155 | 450 |
| MS.gene65172.t1 | MTR_7g059510 | 51.940 | 464 | 159 | 8 | 6 | 454 | 7 | 421 | 2.51e-146 | 424 |
| MS.gene65172.t1 | MTR_7g059525 | 56.631 | 279 | 87 | 5 | 211 | 455 | 10 | 288 | 1.92e-98 | 297 |
| MS.gene65172.t1 | MTR_7g059480 | 77.551 | 196 | 42 | 2 | 1 | 195 | 1 | 195 | 5.27e-92 | 295 |
| MS.gene65172.t1 | MTR_7g059480 | 54.348 | 276 | 84 | 3 | 222 | 455 | 503 | 778 | 3.99e-88 | 285 |
| MS.gene65172.t1 | MTR_7g059515 | 74.866 | 187 | 43 | 2 | 1 | 187 | 1 | 183 | 3.75e-89 | 270 |
| MS.gene65172.t1 | MTR_8g042170 | 36.961 | 487 | 239 | 13 | 6 | 452 | 1 | 459 | 2.01e-86 | 272 |
| MS.gene65172.t1 | MTR_8g037923 | 35.897 | 468 | 252 | 11 | 17 | 452 | 21 | 472 | 9.37e-86 | 271 |
| MS.gene65172.t1 | MTR_7g060080 | 65.285 | 193 | 66 | 1 | 264 | 455 | 4 | 196 | 1.27e-83 | 256 |
| MS.gene65172.t1 | MTR_7g060060 | 65.888 | 214 | 62 | 4 | 49 | 252 | 1 | 213 | 2.42e-81 | 250 |
| MS.gene65172.t1 | MTR_7g059475 | 55.466 | 247 | 89 | 6 | 70 | 298 | 1 | 244 | 2.02e-73 | 231 |
| MS.gene65172.t1 | MTR_8g037920 | 34.483 | 435 | 225 | 10 | 48 | 452 | 7 | 411 | 7.37e-73 | 235 |
| MS.gene65172.t1 | MTR_7g059520 | 59.783 | 184 | 65 | 2 | 273 | 455 | 2 | 177 | 1.28e-72 | 227 |
| MS.gene65172.t1 | MTR_8g042400 | 35.695 | 367 | 189 | 7 | 110 | 452 | 3 | 346 | 6.98e-64 | 210 |
| MS.gene65172.t1 | MTR_7g060200 | 63.043 | 184 | 42 | 5 | 70 | 252 | 1 | 159 | 7.23e-48 | 163 |
| MS.gene65172.t1 | MTR_7g060200 | 73.913 | 46 | 10 | 1 | 409 | 454 | 156 | 199 | 8.67e-15 | 73.6 |
| MS.gene65172.t1 | MTR_1g048070 | 48.731 | 197 | 73 | 6 | 2 | 196 | 3 | 173 | 2.60e-46 | 160 |
| MS.gene65172.t1 | MTR_8g042070 | 43.367 | 196 | 95 | 3 | 274 | 453 | 71 | 266 | 4.94e-39 | 142 |
| MS.gene65172.t1 | MTR_5g016570 | 27.991 | 468 | 295 | 13 | 5 | 451 | 81 | 527 | 9.18e-34 | 133 |
| MS.gene65172.t1 | MTR_8g042080 | 40.449 | 178 | 86 | 5 | 6 | 172 | 1 | 169 | 2.39e-30 | 115 |
| MS.gene65172.t1 | MTR_5g086340 | 26.897 | 435 | 243 | 16 | 42 | 450 | 47 | 432 | 3.25e-26 | 110 |
| MS.gene65172.t1 | MTR_8g005235 | 27.913 | 412 | 261 | 15 | 44 | 442 | 44 | 432 | 5.14e-25 | 107 |
| MS.gene65172.t1 | MTR_8g005325 | 27.896 | 423 | 248 | 12 | 44 | 442 | 73 | 462 | 8.94e-25 | 107 |
| MS.gene65172.t1 | MTR_8g005225 | 22.796 | 465 | 328 | 13 | 2 | 452 | 14 | 461 | 2.29e-24 | 105 |
| MS.gene65172.t1 | MTR_5g086260 | 35.028 | 177 | 109 | 3 | 276 | 450 | 136 | 308 | 2.41e-24 | 103 |
| MS.gene65172.t1 | MTR_8g005265 | 25.404 | 433 | 268 | 14 | 44 | 446 | 44 | 451 | 2.90e-22 | 99.4 |
| MS.gene65172.t1 | MTR_6g010920 | 25.658 | 456 | 277 | 19 | 1 | 446 | 1 | 404 | 4.09e-22 | 98.2 |
| MS.gene65172.t1 | MTR_8g006525 | 28.868 | 433 | 228 | 17 | 20 | 418 | 17 | 403 | 6.94e-22 | 97.8 |
| MS.gene65172.t1 | MTR_8g005295 | 24.138 | 464 | 280 | 15 | 44 | 445 | 53 | 506 | 1.41e-20 | 94.7 |
| MS.gene65172.t1 | MTR_5g087580 | 29.224 | 219 | 147 | 5 | 236 | 451 | 2 | 215 | 2.59e-20 | 89.7 |
| MS.gene65172.t1 | MTR_6g011050 | 26.411 | 443 | 255 | 20 | 19 | 446 | 18 | 404 | 5.87e-20 | 92.0 |
| MS.gene65172.t1 | MTR_8g042830 | 25.176 | 425 | 246 | 13 | 71 | 450 | 16 | 413 | 1.08e-19 | 91.3 |
| MS.gene65172.t1 | MTR_0209s0060 | 27.358 | 424 | 242 | 19 | 41 | 439 | 43 | 425 | 2.10e-19 | 90.5 |
| MS.gene65172.t1 | MTR_0209s0030 | 27.358 | 424 | 242 | 19 | 41 | 439 | 43 | 425 | 2.10e-19 | 90.5 |
| MS.gene65172.t1 | MTR_2g041180 | 25.486 | 463 | 274 | 21 | 5 | 446 | 32 | 444 | 4.18e-19 | 90.1 |
| MS.gene65172.t1 | MTR_6g009590 | 26.290 | 407 | 232 | 18 | 44 | 435 | 42 | 395 | 8.12e-19 | 88.6 |
| MS.gene65172.t1 | MTR_8g005285 | 24.841 | 471 | 294 | 16 | 23 | 445 | 34 | 492 | 1.06e-18 | 89.0 |
| MS.gene65172.t1 | MTR_6g009610 | 25.280 | 447 | 270 | 18 | 1 | 435 | 1 | 395 | 1.14e-18 | 88.2 |
| MS.gene65172.t1 | MTR_2g036320 | 23.831 | 449 | 286 | 17 | 12 | 446 | 54 | 460 | 1.14e-17 | 85.9 |
| MS.gene65172.t1 | MTR_6g009170 | 24.623 | 398 | 238 | 15 | 37 | 427 | 35 | 377 | 4.11e-16 | 80.5 |
| MS.gene65172.t1 | MTR_0024s0080 | 25.500 | 400 | 239 | 17 | 44 | 435 | 42 | 390 | 7.64e-16 | 79.7 |
| MS.gene65172.t1 | MTR_8g042090 | 53.125 | 64 | 29 | 1 | 327 | 389 | 9 | 72 | 2.32e-14 | 69.3 |
| MS.gene65172.t1 | MTR_7g060105 | 66.038 | 53 | 17 | 1 | 350 | 401 | 1 | 53 | 2.43e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65172.t1 | AT3G50120 | 28.667 | 450 | 274 | 16 | 27 | 455 | 105 | 528 | 9.34e-36 | 139 |
| MS.gene65172.t1 | AT3G50180 | 27.195 | 467 | 277 | 17 | 5 | 451 | 158 | 581 | 1.43e-33 | 133 |
| MS.gene65172.t1 | AT3G50140 | 29.032 | 434 | 259 | 19 | 44 | 455 | 130 | 536 | 1.56e-31 | 127 |
| MS.gene65172.t1 | AT3G50150 | 26.386 | 451 | 274 | 16 | 27 | 455 | 92 | 506 | 1.88e-30 | 124 |
| MS.gene65172.t1 | AT3G50130 | 30.000 | 450 | 259 | 20 | 27 | 452 | 141 | 558 | 5.15e-30 | 123 |
| MS.gene65172.t1 | AT3G50170 | 26.898 | 461 | 266 | 17 | 27 | 455 | 115 | 536 | 4.10e-27 | 114 |
| MS.gene65172.t1 | AT3G44710 | 25.821 | 457 | 272 | 17 | 44 | 452 | 65 | 502 | 1.13e-26 | 112 |
| MS.gene65172.t1 | AT3G50160 | 26.147 | 436 | 262 | 16 | 27 | 450 | 106 | 493 | 1.34e-26 | 112 |
| MS.gene65172.t1 | AT5G22540 | 27.833 | 406 | 240 | 16 | 37 | 428 | 42 | 408 | 4.56e-26 | 110 |
| MS.gene65172.t1 | AT3G47200 | 25.822 | 426 | 268 | 12 | 42 | 450 | 61 | 455 | 9.42e-26 | 109 |
| MS.gene65172.t1 | AT3G47200 | 25.822 | 426 | 268 | 12 | 42 | 450 | 61 | 455 | 9.42e-26 | 109 |
| MS.gene65172.t1 | AT5G11290 | 26.667 | 435 | 258 | 14 | 27 | 450 | 35 | 419 | 1.05e-25 | 108 |
| MS.gene65172.t1 | AT3G50190 | 27.231 | 437 | 226 | 21 | 44 | 451 | 113 | 486 | 1.48e-25 | 109 |
| MS.gene65172.t1 | AT4G31980 | 26.517 | 445 | 244 | 17 | 27 | 450 | 295 | 677 | 2.16e-24 | 106 |
| MS.gene65172.t1 | AT5G22550 | 28.879 | 464 | 239 | 23 | 41 | 451 | 58 | 483 | 1.96e-23 | 103 |
| MS.gene65172.t1 | AT2G36430 | 26.977 | 430 | 252 | 16 | 42 | 453 | 60 | 445 | 1.27e-22 | 100 |
| MS.gene65172.t1 | AT3G47250 | 24.769 | 432 | 267 | 14 | 42 | 450 | 76 | 472 | 8.65e-21 | 95.1 |
| MS.gene65172.t1 | AT3G47250 | 24.769 | 432 | 267 | 14 | 42 | 450 | 76 | 472 | 8.65e-21 | 95.1 |
| MS.gene65172.t1 | AT3G47250 | 24.769 | 432 | 267 | 14 | 42 | 450 | 76 | 472 | 8.65e-21 | 95.1 |
| MS.gene65172.t1 | AT2G28580 | 25.858 | 437 | 275 | 18 | 22 | 450 | 103 | 498 | 3.69e-18 | 87.4 |
| MS.gene65172.t1 | AT2G28580 | 25.688 | 436 | 277 | 17 | 22 | 450 | 117 | 512 | 4.51e-18 | 87.0 |
| MS.gene65172.t1 | AT2G44930 | 25.714 | 455 | 262 | 17 | 27 | 450 | 86 | 495 | 6.61e-18 | 86.7 |
| MS.gene65172.t1 | AT5G11290 | 27.164 | 335 | 197 | 10 | 127 | 450 | 52 | 350 | 7.50e-18 | 85.1 |
| MS.gene65172.t1 | AT2G28580 | 26.754 | 456 | 264 | 22 | 22 | 450 | 103 | 515 | 1.07e-17 | 85.9 |
| MS.gene65172.t1 | AT2G28580 | 26.754 | 456 | 264 | 22 | 22 | 450 | 117 | 529 | 1.36e-17 | 85.9 |
| MS.gene65172.t1 | AT2G28580 | 26.638 | 458 | 262 | 22 | 22 | 450 | 35 | 447 | 1.40e-17 | 85.5 |
| MS.gene65172.t1 | AT5G22560 | 24.224 | 483 | 257 | 19 | 41 | 449 | 61 | 508 | 1.76e-15 | 79.0 |
Find 87 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTTTGGTCGTGCATTTC+GGG | 0.191804 | 7.1:+41524063 | None:intergenic |
| TCCTCTCCTGTCTTCAGATT+TGG | 0.228733 | 7.1:+41523947 | None:intergenic |
| TCTCAGAAATAGAACAAATT+TGG | 0.245313 | 7.1:-41524023 | MS.gene65172:CDS |
| TCTGCCACCCTTTGTATCTT+TGG | 0.256920 | 7.1:+41524049 | None:intergenic |
| TTTATGCCCCTGTATGTAAT+TGG | 0.271462 | 7.1:+41522687 | None:intergenic |
| ATTTCCTCATCTGGCGTGGC+TGG | 0.273866 | 7.1:-41523541 | MS.gene65172:CDS |
| CTCAGTACCTTCACATCTTC+AGG | 0.311435 | 7.1:+41522432 | None:intergenic |
| AAGCCAAGCTTGGTGAACTA+TGG | 0.326118 | 7.1:-41523700 | MS.gene65172:CDS |
| GTATCTTTGGTCGTGCATTT+CGG | 0.327768 | 7.1:+41524062 | None:intergenic |
| GCTTGGCTTTCTCCAAGATA+TGG | 0.344706 | 7.1:+41523714 | None:intergenic |
| ATGTTCTTTGCTCCATATCT+TGG | 0.377865 | 7.1:-41523726 | MS.gene65172:CDS |
| AGAAAATCTCTTGAAGGCTT+TGG | 0.379383 | 7.1:-41523791 | MS.gene65172:CDS |
| GACACATCTCATATGCTATC+AGG | 0.397592 | 7.1:+41522520 | None:intergenic |
| GTGAAGGTACTGAGATCAAA+AGG | 0.406085 | 7.1:-41522423 | MS.gene65172:CDS |
| TCAACCAGAAAATCTCTTGA+AGG | 0.407243 | 7.1:-41523797 | MS.gene65172:CDS |
| TTCACCCGGCTAGCAAATAA+AGG | 0.410801 | 7.1:-41522152 | None:intergenic |
| ACTATGGGACATGAATATTA+AGG | 0.413137 | 7.1:-41523684 | MS.gene65172:CDS |
| GCATGACGAATTTCCTCATC+TGG | 0.419369 | 7.1:-41523550 | MS.gene65172:CDS |
| GATGTGGTTCCAAACATAAA+AGG | 0.419689 | 7.1:-41523494 | MS.gene65172:CDS |
| AAGCAGCAGGAATAAAACTT+AGG | 0.425861 | 7.1:-41522656 | MS.gene65172:CDS |
| TCTGGCGTGGCTGGGCGTCA+TGG | 0.429320 | 7.1:-41523532 | MS.gene65172:CDS |
| AGCATTACTTTAATAAATAC+AGG | 0.430752 | 7.1:-41522287 | MS.gene65172:CDS |
| TCAGATTTGGATTGTCATGA+TGG | 0.442609 | 7.1:+41523960 | None:intergenic |
| TTTCCTCATCTGGCGTGGCT+GGG | 0.445116 | 7.1:-41523540 | MS.gene65172:CDS |
| AATTCAAGCCAATTACATAC+AGG | 0.446041 | 7.1:-41522695 | MS.gene65172:CDS |
| TTGTTCTTATGTAGCTCTCA+TGG | 0.446681 | 7.1:-41522472 | MS.gene65172:CDS |
| CTCTTACTTTCATTCAGACA+TGG | 0.453570 | 7.1:-41522182 | MS.gene65172:CDS |
| ATGAAGTACTCAAGCTATTG+AGG | 0.473350 | 7.1:-41523604 | MS.gene65172:CDS |
| ATTGTATTGTACCTTGGACT+TGG | 0.474271 | 7.1:+41523376 | None:intergenic |
| AACTTCCTCATCACTCCAAA+AGG | 0.479306 | 7.1:+41522389 | None:intergenic |
| GTCCCATAGTTCACCAAGCT+TGG | 0.480386 | 7.1:+41523697 | None:intergenic |
| AGCAGCAGGAATAAAACTTA+GGG | 0.482066 | 7.1:-41522655 | MS.gene65172:CDS |
| TCGTGGATGTTGTTCGTGGA+TGG | 0.483877 | 7.1:-41523749 | MS.gene65172:CDS |
| AATAGCTTGAGTACTTCATA+AGG | 0.488338 | 7.1:+41523608 | None:intergenic |
| AGGACCTATTGACACCAACT+TGG | 0.488609 | 7.1:+41523985 | None:intergenic |
| ACCACCTTTATTTGCTAGCC+GGG | 0.492856 | 7.1:+41522148 | None:intergenic |
| ATCAATTTGTTCTTGTGATG+AGG | 0.493885 | 7.1:-41523658 | MS.gene65172:CDS |
| ACTTTAATAAATACAGGACT+TGG | 0.506545 | 7.1:-41522281 | MS.gene65172:CDS |
| AACCACCTTTATTTGCTAGC+CGG | 0.507244 | 7.1:+41522147 | None:intergenic |
| TGCAGCAAGGAATGCAATAA+CGG | 0.510768 | 7.1:+41522218 | None:intergenic |
| GACAATCCAAATCTGAAGAC+AGG | 0.516356 | 7.1:-41523953 | MS.gene65172:CDS |
| ACCTATGATATTGAAAAGAC+TGG | 0.521468 | 7.1:+41522365 | None:intergenic |
| GGACCTATTGACACCAACTT+GGG | 0.521712 | 7.1:+41523986 | None:intergenic |
| CAATATCATAGGTACTGACT+TGG | 0.522571 | 7.1:-41522355 | MS.gene65172:CDS |
| ATACAGGACTTGGATAGCGC+TGG | 0.525922 | 7.1:-41522271 | MS.gene65172:CDS |
| TTTGGATTGTCATGATGGAT+AGG | 0.526326 | 7.1:+41523965 | None:intergenic |
| AATGCTCACGTAATTTCAGC+TGG | 0.528143 | 7.1:+41522304 | None:intergenic |
| ATAAAAGATCTAAAAGCAGC+AGG | 0.528200 | 7.1:-41522669 | MS.gene65172:CDS |
| ATGAAGCTAAAATCAGAGAA+TGG | 0.532341 | 7.1:-41522734 | MS.gene65172:CDS |
| TCAGAGAAAACTATGTCTGT+TGG | 0.532878 | 7.1:+41522615 | None:intergenic |
| AGCCAAGCTTGGTGAACTAT+GGG | 0.539042 | 7.1:-41523699 | MS.gene65172:CDS |
| ACGCCCAGCCACGCCAGATG+AGG | 0.543702 | 7.1:+41523537 | None:intergenic |
| TACAGGACTTGGATAGCGCT+GGG | 0.544301 | 7.1:-41522270 | MS.gene65172:CDS |
| ATCTTGGAGAAAGCCAAGCT+TGG | 0.551611 | 7.1:-41523710 | MS.gene65172:CDS |
| TGCACGACCAAAGATACAAA+GGG | 0.554648 | 7.1:-41524056 | MS.gene65172:CDS |
| CTGGGCGTCATGGTCAGAGA+TGG | 0.554832 | 7.1:-41523522 | MS.gene65172:CDS |
| TCAATTTGTTCTTGTGATGA+GGG | 0.556081 | 7.1:-41523657 | MS.gene65172:CDS |
| GAGAGGAGTACAAGCTTGTG+TGG | 0.567962 | 7.1:-41523931 | MS.gene65172:CDS |
| GTTCCAAACATAAAAGGAGA+AGG | 0.572098 | 7.1:-41523488 | MS.gene65172:CDS |
| ACGAATTTCCTCATCTGGCG+TGG | 0.573992 | 7.1:-41523545 | MS.gene65172:CDS |
| GACATGGTTTACAATTCACC+CGG | 0.582822 | 7.1:-41522166 | MS.gene65172:CDS |
| AGGAATGCAATAACGGTCCA+AGG | 0.588287 | 7.1:+41522225 | None:intergenic |
| GTCAGAGATGGAGAAGGATG+TGG | 0.590361 | 7.1:-41523510 | MS.gene65172:CDS |
| TCTGAATGAAAGTAAGAGCA+AGG | 0.592822 | 7.1:+41522187 | None:intergenic |
| TGATAACATCGATGAACTGA+AGG | 0.593398 | 7.1:-41523846 | MS.gene65172:CDS |
| ATCTTTGGTCGTGCATTTCG+GGG | 0.595449 | 7.1:+41524064 | None:intergenic |
| TGAAGGTACTGAGATCAAAA+GGG | 0.595602 | 7.1:-41522422 | MS.gene65172:CDS |
| CGACCATCCTGAAGATGTGA+AGG | 0.601241 | 7.1:-41522439 | MS.gene65172:CDS |
| ATAAGATCAAGAAGATGAGT+AGG | 0.605193 | 7.1:+41523422 | None:intergenic |
| ATGCACGACCAAAGATACAA+AGG | 0.613476 | 7.1:-41524057 | MS.gene65172:CDS |
| GACCTATTGACACCAACTTG+GGG | 0.616855 | 7.1:+41523987 | None:intergenic |
| GCTGTCGTGGATGTTGTTCG+TGG | 0.618355 | 7.1:-41523753 | MS.gene65172:CDS |
| GCCTTGAAGAAAAGCTGTCG+TGG | 0.621035 | 7.1:-41523766 | MS.gene65172:CDS |
| ATTCAAGCCAATTACATACA+GGG | 0.622285 | 7.1:-41522694 | MS.gene65172:CDS |
| CGTCACTACATCCAAGTCCA+AGG | 0.633357 | 7.1:-41523387 | MS.gene65172:intron |
| TTCAAGCCAATTACATACAG+GGG | 0.647249 | 7.1:-41522693 | MS.gene65172:CDS |
| TATCAGGTTGAGTAAAGTAG+AGG | 0.648563 | 7.1:+41522536 | None:intergenic |
| CTGAATGAAAGTAAGAGCAA+GGG | 0.649353 | 7.1:+41522188 | None:intergenic |
| AGAGGAGTACAAGCTTGTGT+GGG | 0.651809 | 7.1:-41523930 | MS.gene65172:CDS |
| ACCTATTGACACCAACTTGG+GGG | 0.654484 | 7.1:+41523988 | None:intergenic |
| CAAGGGCAATAAATGCAGCA+AGG | 0.656895 | 7.1:+41522205 | None:intergenic |
| AAATACATAGAAGAAAACAC+TGG | 0.656917 | 7.1:-41523902 | MS.gene65172:CDS |
| GTACCTTCACATCTTCAGGA+TGG | 0.667216 | 7.1:+41522436 | None:intergenic |
| GTCATGGTCAGAGATGGAGA+AGG | 0.697983 | 7.1:-41523516 | MS.gene65172:CDS |
| TCCAAATCTGAAGACAGGAG+AGG | 0.711316 | 7.1:-41523948 | MS.gene65172:CDS |
| AAACACTGGACTTATTCCAG+AGG | 0.712051 | 7.1:-41523888 | MS.gene65172:CDS |
| ACGACCAAAGATACAAAGGG+TGG | 0.740873 | 7.1:-41524053 | MS.gene65172:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTTTTTATTTTTT+TGG | - | chr7.1:41523320-41523339 | MS.gene65172:intron | 0.0% |
| !!! | TTTTTATTATTATTATTATA+AGG | - | chr7.1:41523475-41523494 | MS.gene65172:CDS | 0.0% |
| !! | AAATATTAAAGAAAAATTTG+TGG | - | chr7.1:41522166-41522185 | MS.gene65172:CDS | 10.0% |
| !!! | AAATTTTTCTTTAATATTTG+GGG | + | chr7.1:41522165-41522184 | None:intergenic | 10.0% |
| !!! | ACAAATTTTTCTTTAATATT+TGG | + | chr7.1:41522167-41522186 | None:intergenic | 10.0% |
| !!! | CAAATTTTTCTTTAATATTT+GGG | + | chr7.1:41522166-41522185 | None:intergenic | 10.0% |
| !!! | ATAGAAGTGATTTTTATTAT+TGG | - | chr7.1:41523267-41523286 | MS.gene65172:intron | 15.0% |
| !! | AGCATTACTTTAATAAATAC+AGG | - | chr7.1:41523989-41524008 | MS.gene65172:CDS | 20.0% |
| !! | TTCTGATGAAAATATAGAAA+CGG | + | chr7.1:41523050-41523069 | None:intergenic | 20.0% |
| !!! | TGATTTTTATTATTGGACAA+AGG | - | chr7.1:41523274-41523293 | MS.gene65172:intron | 20.0% |
| ! | AAATACATAGAAGAAAACAC+TGG | - | chr7.1:41522374-41522393 | MS.gene65172:CDS | 25.0% |
| ! | AAGATAATCCAATTCATTTC+TGG | - | chr7.1:41523498-41523517 | MS.gene65172:CDS | 25.0% |
| ! | ACTTTAATAAATACAGGACT+TGG | - | chr7.1:41523995-41524014 | MS.gene65172:CDS | 25.0% |
| ! | TCTCAGAAATAGAACAAATT+TGG | - | chr7.1:41522253-41522272 | MS.gene65172:CDS | 25.0% |
| ! | TTGTTAATTGTATTGTACCT+TGG | + | chr7.1:41522909-41522928 | None:intergenic | 25.0% |
| !!! | AAGTTGTTCACATTGATTTT+AGG | + | chr7.1:41523715-41523734 | None:intergenic | 25.0% |
| !!! | TGTTTTAACCAGAAATGAAT+TGG | + | chr7.1:41523509-41523528 | None:intergenic | 25.0% |
| AATAGCTTGAGTACTTCATA+AGG | + | chr7.1:41522671-41522690 | None:intergenic | 30.0% | |
| AATTCAAGCCAATTACATAC+AGG | - | chr7.1:41523581-41523600 | MS.gene65172:CDS | 30.0% | |
| ACCTATGATATTGAAAAGAC+TGG | + | chr7.1:41523914-41523933 | None:intergenic | 30.0% | |
| ACTATGGGACATGAATATTA+AGG | - | chr7.1:41522592-41522611 | MS.gene65172:CDS | 30.0% | |
| ATAAAAGATCTAAAAGCAGC+AGG | - | chr7.1:41523607-41523626 | MS.gene65172:CDS | 30.0% | |
| ATAAGATCAAGAAGATGAGT+AGG | + | chr7.1:41522857-41522876 | None:intergenic | 30.0% | |
| ATGAAGCTAAAATCAGAGAA+TGG | - | chr7.1:41523542-41523561 | MS.gene65172:CDS | 30.0% | |
| ATTCAAGCCAATTACATACA+GGG | - | chr7.1:41523582-41523601 | MS.gene65172:CDS | 30.0% | |
| ! | AATTTTGTCTCTAACACTTG+AGG | - | chr7.1:41522995-41523014 | MS.gene65172:intron | 30.0% |
| ! | ATCAATTTGTTCTTGTGATG+AGG | - | chr7.1:41522618-41522637 | MS.gene65172:CDS | 30.0% |
| ! | ATTTTGTCTCTAACACTTGA+GGG | - | chr7.1:41522996-41523015 | MS.gene65172:intron | 30.0% |
| ! | TCAATTTGTTCTTGTGATGA+GGG | - | chr7.1:41522619-41522638 | MS.gene65172:CDS | 30.0% |
| !!! | TTTTTTGGTCTTAGATGAAG+TGG | - | chr7.1:41523335-41523354 | MS.gene65172:intron | 30.0% |
| AAATACCGAAATTGCAAGGT+CGG | + | chr7.1:41523426-41523445 | None:intergenic | 35.0% | |
| AAGCAGCAGGAATAAAACTT+AGG | - | chr7.1:41523620-41523639 | MS.gene65172:CDS | 35.0% | |
| AGAAAATCTCTTGAAGGCTT+TGG | - | chr7.1:41522485-41522504 | MS.gene65172:CDS | 35.0% | |
| AGCAGCAGGAATAAAACTTA+GGG | - | chr7.1:41523621-41523640 | MS.gene65172:CDS | 35.0% | |
| ATGTTCTTTGCTCCATATCT+TGG | - | chr7.1:41522550-41522569 | MS.gene65172:CDS | 35.0% | |
| ATTGTATTGTACCTTGGACT+TGG | + | chr7.1:41522903-41522922 | None:intergenic | 35.0% | |
| CTCTTACTTTCATTCAGACA+TGG | - | chr7.1:41524094-41524113 | MS.gene65172:CDS | 35.0% | |
| CTGAATGAAAGTAAGAGCAA+GGG | + | chr7.1:41524091-41524110 | None:intergenic | 35.0% | |
| GATGTGGTTCCAAACATAAA+AGG | - | chr7.1:41522782-41522801 | MS.gene65172:intron | 35.0% | |
| GCACTTACTTCAAAAATCCT+TGG | - | chr7.1:41524034-41524053 | MS.gene65172:CDS | 35.0% | |
| GTTCCAAACATAAAAGGAGA+AGG | - | chr7.1:41522788-41522807 | MS.gene65172:intron | 35.0% | |
| TCAACCAGAAAATCTCTTGA+AGG | - | chr7.1:41522479-41522498 | MS.gene65172:CDS | 35.0% | |
| TCAGAGAAAACTATGTCTGT+TGG | + | chr7.1:41523664-41523683 | None:intergenic | 35.0% | |
| TCAGATTTGGATTGTCATGA+TGG | + | chr7.1:41522319-41522338 | None:intergenic | 35.0% | |
| TCTGAATGAAAGTAAGAGCA+AGG | + | chr7.1:41524092-41524111 | None:intergenic | 35.0% | |
| TGATAACATCGATGAACTGA+AGG | - | chr7.1:41522430-41522449 | MS.gene65172:CDS | 35.0% | |
| TGGAAAATACCGAAATTGCA+AGG | + | chr7.1:41523430-41523449 | None:intergenic | 35.0% | |
| TTCAAGCCAATTACATACAG+GGG | - | chr7.1:41523583-41523602 | MS.gene65172:CDS | 35.0% | |
| TTGTTCTTATGTAGCTCTCA+TGG | - | chr7.1:41523804-41523823 | MS.gene65172:CDS | 35.0% | |
| TTTATGCCCCTGTATGTAAT+TGG | + | chr7.1:41523592-41523611 | None:intergenic | 35.0% | |
| ! | AAAGCCTTCAAGAGATTTTC+TGG | + | chr7.1:41522486-41522505 | None:intergenic | 35.0% |
| ! | AATTTTGAATCCTAAACCCC+CGG | - | chr7.1:41523204-41523223 | MS.gene65172:intron | 35.0% |
| ! | ACAGACATAGTTTTCTCTGA+AGG | - | chr7.1:41523664-41523683 | MS.gene65172:CDS | 35.0% |
| ! | ATCTTTTTGTGTAGTTCCTC+TGG | + | chr7.1:41522407-41522426 | None:intergenic | 35.0% |
| ! | ATGAAGTACTCAAGCTATTG+AGG | - | chr7.1:41522672-41522691 | MS.gene65172:CDS | 35.0% |
| ! | GCCAGTCTTTTCAATATCAT+AGG | - | chr7.1:41523910-41523929 | MS.gene65172:CDS | 35.0% |
| ! | TCTCCTTCTCCTTTTATGTT+TGG | + | chr7.1:41522794-41522813 | None:intergenic | 35.0% |
| !! | ACATAGTTTTCTCTGAAGGA+TGG | - | chr7.1:41523668-41523687 | MS.gene65172:CDS | 35.0% |
| !! | CAATATCATAGGTACTGACT+TGG | - | chr7.1:41523921-41523940 | MS.gene65172:CDS | 35.0% |
| !! | GTGTGTGAGTTTATTTTCAG+TGG | + | chr7.1:41523365-41523384 | None:intergenic | 35.0% |
| !! | TATCAGGTTGAGTAAAGTAG+AGG | + | chr7.1:41523743-41523762 | None:intergenic | 35.0% |
| !! | TGAAGGTACTGAGATCAAAA+GGG | - | chr7.1:41523854-41523873 | MS.gene65172:CDS | 35.0% |
| !! | TTTGGATTGTCATGATGGAT+AGG | + | chr7.1:41522314-41522333 | None:intergenic | 35.0% |
| AAACACTGGACTTATTCCAG+AGG | - | chr7.1:41522388-41522407 | MS.gene65172:CDS | 40.0% | |
| AACTTCCTCATCACTCCAAA+AGG | + | chr7.1:41523890-41523909 | None:intergenic | 40.0% | |
| AATGCTCACGTAATTTCAGC+TGG | + | chr7.1:41523975-41523994 | None:intergenic | 40.0% | |
| ATGCACGACCAAAGATACAA+AGG | - | chr7.1:41522219-41522238 | MS.gene65172:CDS | 40.0% | |
| GACAATCCAAATCTGAAGAC+AGG | - | chr7.1:41522323-41522342 | MS.gene65172:CDS | 40.0% | |
| GACACATCTCATATGCTATC+AGG | + | chr7.1:41523759-41523778 | None:intergenic | 40.0% | |
| GACATGGTTTACAATTCACC+CGG | - | chr7.1:41524110-41524129 | MS.gene65172:CDS | 40.0% | |
| GTATCTTTGGTCGTGCATTT+CGG | + | chr7.1:41522217-41522236 | None:intergenic | 40.0% | |
| TAAACTCACACACAACTGTG+AGG | - | chr7.1:41523372-41523391 | MS.gene65172:intron | 40.0% | |
| TATCTTTGGTCGTGCATTTC+GGG | + | chr7.1:41522216-41522235 | None:intergenic | 40.0% | |
| TCTAGAAATCCTAGCTCAAC+TGG | + | chr7.1:41523450-41523469 | None:intergenic | 40.0% | |
| TGCACGACCAAAGATACAAA+GGG | - | chr7.1:41522220-41522239 | MS.gene65172:CDS | 40.0% | |
| TGCAGCAAGGAATGCAATAA+CGG | + | chr7.1:41524061-41524080 | None:intergenic | 40.0% | |
| TTGTTATCTCCGAGTGATAC+CGG | + | chr7.1:41523226-41523245 | None:intergenic | 40.0% | |
| ! | AAGGGATTTTGTGCACCTTT+TGG | - | chr7.1:41523872-41523891 | MS.gene65172:CDS | 40.0% |
| !! | GTGAAGGTACTGAGATCAAA+AGG | - | chr7.1:41523853-41523872 | MS.gene65172:CDS | 40.0% |
| ACCTATTGACACCAACTTGG+GGG | + | chr7.1:41522291-41522310 | None:intergenic | 45.0% | |
| ACGACCAAAGATACAAAGGG+TGG | - | chr7.1:41522223-41522242 | MS.gene65172:CDS | 45.0% | |
| AGGAATGCAATAACGGTCCA+AGG | + | chr7.1:41524054-41524073 | None:intergenic | 45.0% | |
| AGGACCTATTGACACCAACT+TGG | + | chr7.1:41522294-41522313 | None:intergenic | 45.0% | |
| ATCTTGGAGAAAGCCAAGCT+TGG | - | chr7.1:41522566-41522585 | MS.gene65172:CDS | 45.0% | |
| ATCTTTGGTCGTGCATTTCG+GGG | + | chr7.1:41522215-41522234 | None:intergenic | 45.0% | |
| CAAGGGCAATAAATGCAGCA+AGG | + | chr7.1:41524074-41524093 | None:intergenic | 45.0% | |
| CTCAGTACCTTCACATCTTC+AGG | + | chr7.1:41523847-41523866 | None:intergenic | 45.0% | |
| GACCTATTGACACCAACTTG+GGG | + | chr7.1:41522292-41522311 | None:intergenic | 45.0% | |
| GCATGACGAATTTCCTCATC+TGG | - | chr7.1:41522726-41522745 | MS.gene65172:CDS | 45.0% | |
| GGACCTATTGACACCAACTT+GGG | + | chr7.1:41522293-41522312 | None:intergenic | 45.0% | |
| GTACCTTCACATCTTCAGGA+TGG | + | chr7.1:41523843-41523862 | None:intergenic | 45.0% | |
| TCCAAATCTGAAGACAGGAG+AGG | - | chr7.1:41522328-41522347 | MS.gene65172:CDS | 45.0% | |
| TCCTCTCCTGTCTTCAGATT+TGG | + | chr7.1:41522332-41522351 | None:intergenic | 45.0% | |
| TCTGCCACCCTTTGTATCTT+TGG | + | chr7.1:41522230-41522249 | None:intergenic | 45.0% | |
| TGTTATCTCCGAGTGATACC+GGG | + | chr7.1:41523225-41523244 | None:intergenic | 45.0% | |
| ! | AAGCCAAGCTTGGTGAACTA+TGG | - | chr7.1:41522576-41522595 | MS.gene65172:CDS | 45.0% |
| ! | AGAGGAGTACAAGCTTGTGT+GGG | - | chr7.1:41522346-41522365 | MS.gene65172:CDS | 45.0% |
| ! | AGCCAAGCTTGGTGAACTAT+GGG | - | chr7.1:41522577-41522596 | MS.gene65172:CDS | 45.0% |
| ! | CGGTATTTTCCAGTTGAGCT+AGG | - | chr7.1:41523438-41523457 | MS.gene65172:CDS | 45.0% |
| ! | GATGAGGGATGTGCTTTTGT+TGG | - | chr7.1:41522634-41522653 | MS.gene65172:CDS | 45.0% |
| ! | GCTTGGCTTTCTCCAAGATA+TGG | + | chr7.1:41522565-41522584 | None:intergenic | 45.0% |
| ! | TCCACGACAGCTTTTCTTCA+AGG | + | chr7.1:41522514-41522533 | None:intergenic | 45.0% |
| ACACACAACTGTGAGGTCCA+GGG | - | chr7.1:41523379-41523398 | MS.gene65172:intron | 50.0% | |
| ACGAATTTCCTCATCTGGCG+TGG | - | chr7.1:41522731-41522750 | MS.gene65172:CDS | 50.0% | |
| ATACAGGACTTGGATAGCGC+TGG | - | chr7.1:41524005-41524024 | MS.gene65172:CDS | 50.0% | |
| CAAGCATTACACCCCCAAGT+TGG | - | chr7.1:41522277-41522296 | MS.gene65172:CDS | 50.0% | |
| CGACCATCCTGAAGATGTGA+AGG | - | chr7.1:41523837-41523856 | MS.gene65172:CDS | 50.0% | |
| CGTCACTACATCCAAGTCCA+AGG | - | chr7.1:41522889-41522908 | MS.gene65172:intron | 50.0% | |
| GACGTCCGACCTTGCAATTT+CGG | - | chr7.1:41523418-41523437 | MS.gene65172:CDS | 50.0% | |
| GCCTTGAAGAAAAGCTGTCG+TGG | - | chr7.1:41522510-41522529 | MS.gene65172:CDS | 50.0% | |
| GTCAGAGATGGAGAAGGATG+TGG | - | chr7.1:41522766-41522785 | MS.gene65172:intron | 50.0% | |
| GTCATGGTCAGAGATGGAGA+AGG | - | chr7.1:41522760-41522779 | MS.gene65172:intron | 50.0% | |
| GTCCCATAGTTCACCAAGCT+TGG | + | chr7.1:41522582-41522601 | None:intergenic | 50.0% | |
| GTTATCTCCGAGTGATACCG+GGG | + | chr7.1:41523224-41523243 | None:intergenic | 50.0% | |
| TACAGGACTTGGATAGCGCT+GGG | - | chr7.1:41524006-41524025 | MS.gene65172:CDS | 50.0% | |
| TCGTGGATGTTGTTCGTGGA+TGG | - | chr7.1:41522527-41522546 | MS.gene65172:CDS | 50.0% | |
| TTATCTCCGAGTGATACCGG+GGG | + | chr7.1:41523223-41523242 | None:intergenic | 50.0% | |
| ! | GAGAGGAGTACAAGCTTGTG+TGG | - | chr7.1:41522345-41522364 | MS.gene65172:CDS | 50.0% |
| !! | ACCCCCAAGTTGGTGTCAAT+AGG | - | chr7.1:41522287-41522306 | MS.gene65172:CDS | 50.0% |
| !!! | GTGCACCTTTTGGAGTGATG+AGG | - | chr7.1:41523882-41523901 | MS.gene65172:CDS | 50.0% |
| ATTTCCTCATCTGGCGTGGC+TGG | - | chr7.1:41522735-41522754 | MS.gene65172:CDS | 55.0% | |
| CACACACAACTGTGAGGTCC+AGG | - | chr7.1:41523378-41523397 | MS.gene65172:intron | 55.0% | |
| CCTAAACCCCCGGTATCACT+CGG | - | chr7.1:41523214-41523233 | MS.gene65172:intron | 55.0% | |
| GCTGTCGTGGATGTTGTTCG+TGG | - | chr7.1:41522523-41522542 | MS.gene65172:CDS | 55.0% | |
| TTTCCTCATCTGGCGTGGCT+GGG | - | chr7.1:41522736-41522755 | MS.gene65172:CDS | 55.0% | |
| AAGGTCGGACGTCGTGACCT+GGG | + | chr7.1:41523411-41523430 | None:intergenic | 60.0% | |
| CCGAGTGATACCGGGGGTTT+AGG | + | chr7.1:41523217-41523236 | None:intergenic | 60.0% | |
| CTGGGCGTCATGGTCAGAGA+TGG | - | chr7.1:41522754-41522773 | MS.gene65172:intron | 60.0% | |
| CAAGGTCGGACGTCGTGACC+TGG | + | chr7.1:41523412-41523431 | None:intergenic | 65.0% | |
| CGTGACCTGGGTTCGAACCC+TGG | + | chr7.1:41523399-41523418 | None:intergenic | 65.0% | |
| GAGGTCCAGGGTTCGAACCC+AGG | - | chr7.1:41523391-41523410 | MS.gene65172:CDS | 65.0% | |
| ACGCCCAGCCACGCCAGATG+AGG | + | chr7.1:41522742-41522761 | None:intergenic | 70.0% | |
| TCTGGCGTGGCTGGGCGTCA+TGG | - | chr7.1:41522744-41522763 | MS.gene65172:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 41522155 | 41524143 | 41522155 | ID=MS.gene65172 |
| chr7.1 | mRNA | 41522155 | 41524143 | 41522155 | ID=MS.gene65172.t1;Parent=MS.gene65172 |
| chr7.1 | exon | 41523388 | 41524143 | 41523388 | ID=MS.gene65172.t1.exon1;Parent=MS.gene65172.t1 |
| chr7.1 | CDS | 41523388 | 41524143 | 41523388 | ID=cds.MS.gene65172.t1;Parent=MS.gene65172.t1 |
| chr7.1 | exon | 41522155 | 41522766 | 41522155 | ID=MS.gene65172.t1.exon2;Parent=MS.gene65172.t1 |
| chr7.1 | CDS | 41522155 | 41522766 | 41522155 | ID=cds.MS.gene65172.t1;Parent=MS.gene65172.t1 |
| Gene Sequence |
| Protein sequence |
