Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95562.t1 | KEH29682.1 | 99.7 | 349 | 1 | 0 | 1 | 349 | 1 | 349 | 2.00E-201 | 711.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95562.t1 | A8MRC7 | 81.2 | 340 | 64 | 0 | 10 | 349 | 68 | 407 | 4.7e-167 | 588.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95562.t1 | A0A072UJ17 | 99.7 | 349 | 1 | 0 | 1 | 349 | 1 | 349 | 1.4e-201 | 711.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene95562 | 0.895903 | 6.16E-76 | -1.69E-46 |
| MS.gene049159 | MS.gene95562 | 0.825738 | 3.98E-54 | -1.69E-46 |
| MS.gene049178 | MS.gene95562 | 0.806068 | 9.84E-50 | -1.69E-46 |
| MS.gene049208 | MS.gene95562 | 0.813254 | 2.81E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene95562 | 0.802621 | 5.14E-49 | -1.69E-46 |
| MS.gene049350 | MS.gene95562 | 0.839875 | 1.22E-57 | -1.69E-46 |
| MS.gene049368 | MS.gene95562 | 0.851546 | 8.27E-61 | -1.69E-46 |
| MS.gene049711 | MS.gene95562 | 0.800544 | 1.37E-48 | -1.69E-46 |
| MS.gene049807 | MS.gene95562 | 0.807927 | 3.98E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene95562 | 0.816952 | 4.24E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene95562 | 0.825488 | 4.56E-54 | -1.69E-46 |
| MS.gene050213 | MS.gene95562 | 0.80263 | 5.12E-49 | -1.69E-46 |
| MS.gene050224 | MS.gene95562 | 0.803286 | 3.75E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene95562 | 0.805321 | 1.41E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene95562 | 0.846435 | 2.18E-59 | -1.69E-46 |
| MS.gene050556 | MS.gene95562 | 0.823637 | 1.24E-53 | -1.69E-46 |
| MS.gene050646 | MS.gene95562 | 0.806503 | 7.97E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene95562 | 0.824037 | 1.00E-53 | -1.69E-46 |
| MS.gene050657 | MS.gene95562 | 0.817805 | 2.73E-52 | -1.69E-46 |
| MS.gene050826 | MS.gene95562 | 0.81499 | 1.16E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene95562 | 0.821304 | 4.33E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene95562 | 0.816548 | 5.23E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene95562 | 0.804112 | 2.53E-49 | -1.69E-46 |
| MS.gene051029 | MS.gene95562 | 0.808447 | 3.08E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene95562 | 0.830739 | 2.48E-55 | -1.69E-46 |
| MS.gene051234 | MS.gene95562 | 0.813368 | 2.65E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene95562 | 0.829973 | 3.81E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene95562 | 0.805158 | 1.53E-49 | -1.69E-46 |
| MS.gene051490 | MS.gene95562 | 0.826478 | 2.65E-54 | -1.69E-46 |
| MS.gene05150 | MS.gene95562 | 0.809786 | 1.59E-50 | -1.69E-46 |
| MS.gene05155 | MS.gene95562 | 0.824617 | 7.33E-54 | -1.69E-46 |
| MS.gene051700 | MS.gene95562 | 0.803625 | 3.19E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene95562 | 0.816222 | 6.18E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene95562 | 0.806384 | 8.44E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene95562 | 0.813032 | 3.14E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene95562 | 0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene95562 | 0.815615 | 8.44E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene95562 | 0.808289 | 3.33E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene95562 | 0.805189 | 1.50E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene95562 | 0.801398 | 9.18E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene95562 | 0.802998 | 4.30E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene95562 | 0.861307 | 1.12E-63 | -1.69E-46 |
| MS.gene052335 | MS.gene95562 | 0.817669 | 2.93E-52 | -1.69E-46 |
| MS.gene052342 | MS.gene95562 | 0.806602 | 7.60E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene95562 | 0.80407 | 2.58E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene95562 | 0.865243 | 6.80E-65 | -1.69E-46 |
| MS.gene052514 | MS.gene95562 | 0.810834 | 9.46E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene95562 | 0.845357 | 4.27E-59 | -1.69E-46 |
| MS.gene052518 | MS.gene95562 | 0.800259 | 1.57E-48 | -1.69E-46 |
| MS.gene052609 | MS.gene95562 | 0.868438 | 6.53E-66 | -1.69E-46 |
| MS.gene052776 | MS.gene95562 | 0.804393 | 2.21E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene95562 | 0.817295 | 3.55E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene95562 | 0.82508 | 5.70E-54 | -1.69E-46 |
| MS.gene052932 | MS.gene95562 | 0.821406 | 4.11E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene95562 | 0.835462 | 1.65E-56 | -1.69E-46 |
| MS.gene053143 | MS.gene95562 | 0.837994 | 3.74E-57 | -1.69E-46 |
| MS.gene053144 | MS.gene95562 | 0.829534 | 4.88E-55 | -1.69E-46 |
| MS.gene053164 | MS.gene95562 | 0.835053 | 2.10E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene95562 | 0.816927 | 4.30E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene95562 | 0.851105 | 1.10E-60 | -1.69E-46 |
| MS.gene05423 | MS.gene95562 | 0.817525 | 3.15E-52 | -1.69E-46 |
| MS.gene054472 | MS.gene95562 | 0.801664 | 8.09E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene95562 | 0.803644 | 3.16E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene95562 | 0.816489 | 5.39E-52 | -1.69E-46 |
| MS.gene05458 | MS.gene95562 | 0.84717 | 1.37E-59 | -1.69E-46 |
| MS.gene054651 | MS.gene95562 | 0.809034 | 2.31E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene95562 | 0.802306 | 5.97E-49 | -1.69E-46 |
| MS.gene054824 | MS.gene95562 | 0.80755 | 4.79E-50 | -1.69E-46 |
| MS.gene054943 | MS.gene95562 | 0.801419 | 9.08E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene95562 | 0.801852 | 7.40E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene95562 | 0.826583 | 2.51E-54 | -1.69E-46 |
| MS.gene055311 | MS.gene95562 | 0.840695 | 7.45E-58 | -1.69E-46 |
| MS.gene055313 | MS.gene95562 | 0.866167 | 3.48E-65 | -1.69E-46 |
| MS.gene055314 | MS.gene95562 | 0.820212 | 7.73E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene95562 | 0.822115 | 2.81E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene95562 | 0.821932 | 3.10E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene95562 | 0.823574 | 1.29E-53 | -1.69E-46 |
| MS.gene055469 | MS.gene95562 | 0.841698 | 4.06E-58 | -1.69E-46 |
| MS.gene055513 | MS.gene95562 | 0.87392 | 1.01E-67 | -1.69E-46 |
| MS.gene055864 | MS.gene95562 | 0.8274 | 1.60E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene95562 | 0.835866 | 1.31E-56 | -1.69E-46 |
| MS.gene056045 | MS.gene95562 | 0.824456 | 7.99E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene95562 | 0.808937 | 2.42E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene95562 | 0.852595 | 4.16E-61 | -1.69E-46 |
| MS.gene056308 | MS.gene95562 | 0.848942 | 4.44E-60 | -1.69E-46 |
| MS.gene056390 | MS.gene95562 | 0.807403 | 5.14E-50 | -1.69E-46 |
| MS.gene056507 | MS.gene95562 | 0.830063 | 3.63E-55 | -1.69E-46 |
| MS.gene056699 | MS.gene95562 | 0.82791 | 1.20E-54 | -1.69E-46 |
| MS.gene056831 | MS.gene95562 | 0.807914 | 4.00E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene95562 | 0.80741 | 5.12E-50 | -1.69E-46 |
| MS.gene05690 | MS.gene95562 | 0.800926 | 1.15E-48 | -1.69E-46 |
| MS.gene057034 | MS.gene95562 | 0.809645 | 1.71E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene95562 | 0.806953 | 6.40E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene95562 | 0.806343 | 8.62E-50 | -1.69E-46 |
| MS.gene057294 | MS.gene95562 | 0.811525 | 6.70E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene95562 | 0.826069 | 3.32E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene95562 | 0.820842 | 5.54E-53 | -1.69E-46 |
| MS.gene058289 | MS.gene95562 | 0.815284 | 1.00E-51 | -1.69E-46 |
| MS.gene058292 | MS.gene95562 | 0.804292 | 2.32E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene95562 | 0.823144 | 1.62E-53 | -1.69E-46 |
| MS.gene058360 | MS.gene95562 | 0.809681 | 1.68E-50 | -1.69E-46 |
| MS.gene058638 | MS.gene95562 | 0.816686 | 4.86E-52 | -1.69E-46 |
| MS.gene058639 | MS.gene95562 | 0.820671 | 6.06E-53 | -1.69E-46 |
| MS.gene058647 | MS.gene95562 | 0.813842 | 2.09E-51 | -1.69E-46 |
| MS.gene058649 | MS.gene95562 | 0.82002 | 8.55E-53 | -1.69E-46 |
| MS.gene058668 | MS.gene95562 | 0.804296 | 2.31E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene95562 | 0.820341 | 7.22E-53 | -1.69E-46 |
| MS.gene059144 | MS.gene95562 | 0.824859 | 6.42E-54 | -1.69E-46 |
| MS.gene059170 | MS.gene95562 | 0.848317 | 6.62E-60 | -1.69E-46 |
| MS.gene059171 | MS.gene95562 | 0.827224 | 1.76E-54 | -1.69E-46 |
| MS.gene059283 | MS.gene95562 | 0.80963 | 1.72E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene95562 | 0.838151 | 3.41E-57 | -1.69E-46 |
| MS.gene059570 | MS.gene95562 | 0.824456 | 7.99E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene95562 | 0.813035 | 3.14E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene95562 | 0.832595 | 8.64E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene95562 | 0.80997 | 1.45E-50 | -1.69E-46 |
| MS.gene060167 | MS.gene95562 | 0.803659 | 3.14E-49 | -1.69E-46 |
| MS.gene060380 | MS.gene95562 | 0.82743 | 1.57E-54 | -1.69E-46 |
| MS.gene060400 | MS.gene95562 | 0.817884 | 2.62E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene95562 | 0.819116 | 1.37E-52 | -1.69E-46 |
| MS.gene060637 | MS.gene95562 | 0.816353 | 5.78E-52 | -1.69E-46 |
| MS.gene060777 | MS.gene95562 | 0.828269 | 9.87E-55 | -1.69E-46 |
| MS.gene060869 | MS.gene95562 | 0.803086 | 4.12E-49 | -1.69E-46 |
| MS.gene060870 | MS.gene95562 | 0.810435 | 1.15E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene95562 | 0.829303 | 5.55E-55 | -1.69E-46 |
| MS.gene060933 | MS.gene95562 | 0.808864 | 2.51E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene95562 | 0.801543 | 8.57E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene95562 | 0.812764 | 3.60E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene95562 | 0.845596 | 3.68E-59 | -1.69E-46 |
| MS.gene061100 | MS.gene95562 | 0.851188 | 1.04E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95562.t1 | MTR_4g048320 | 99.713 | 349 | 1 | 0 | 1 | 349 | 1 | 349 | 0.0 | 727 |
| MS.gene95562.t1 | MTR_4g048320 | 99.412 | 340 | 2 | 0 | 10 | 349 | 68 | 407 | 0.0 | 707 |
| MS.gene95562.t1 | MTR_2g088270 | 81.176 | 340 | 59 | 2 | 10 | 349 | 68 | 402 | 0.0 | 576 |
| MS.gene95562.t1 | MTR_3g073370 | 66.667 | 348 | 109 | 2 | 6 | 349 | 52 | 396 | 7.01e-179 | 501 |
| MS.gene95562.t1 | MTR_3g073370 | 66.667 | 348 | 109 | 2 | 6 | 349 | 51 | 395 | 7.07e-179 | 501 |
| MS.gene95562.t1 | MTR_4g013305 | 73.592 | 284 | 75 | 0 | 66 | 349 | 95 | 378 | 3.24e-168 | 474 |
| MS.gene95562.t1 | MTR_4g035490 | 59.692 | 325 | 127 | 1 | 23 | 347 | 61 | 381 | 2.21e-153 | 436 |
| MS.gene95562.t1 | MTR_5g009700 | 46.377 | 276 | 133 | 5 | 40 | 314 | 80 | 341 | 2.47e-81 | 251 |
| MS.gene95562.t1 | MTR_5g009700 | 46.097 | 269 | 130 | 5 | 47 | 314 | 1 | 255 | 1.63e-79 | 244 |
| MS.gene95562.t1 | MTR_3g090600 | 48.846 | 260 | 125 | 4 | 40 | 298 | 80 | 332 | 2.47e-79 | 246 |
| MS.gene95562.t1 | MTR_3g090600 | 48.846 | 260 | 123 | 5 | 40 | 298 | 80 | 330 | 6.50e-78 | 243 |
| MS.gene95562.t1 | MTR_1g012800 | 43.893 | 262 | 136 | 5 | 38 | 298 | 85 | 336 | 7.53e-69 | 219 |
| MS.gene95562.t1 | MTR_3g090600 | 48.085 | 235 | 111 | 5 | 40 | 270 | 80 | 307 | 2.99e-63 | 204 |
| MS.gene95562.t1 | MTR_3g090600 | 48.085 | 235 | 109 | 6 | 40 | 270 | 80 | 305 | 8.34e-62 | 200 |
| MS.gene95562.t1 | MTR_8g463930 | 33.136 | 338 | 185 | 11 | 25 | 336 | 6 | 328 | 8.53e-51 | 172 |
| MS.gene95562.t1 | MTR_2g078030 | 35.496 | 262 | 152 | 7 | 77 | 335 | 74 | 321 | 3.48e-50 | 171 |
| MS.gene95562.t1 | MTR_2g078030 | 36.842 | 228 | 134 | 5 | 77 | 302 | 74 | 293 | 2.80e-46 | 160 |
| MS.gene95562.t1 | MTR_5g041210 | 23.077 | 260 | 176 | 6 | 46 | 292 | 343 | 591 | 6.95e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95562.t1 | AT1G05170 | 81.176 | 340 | 64 | 0 | 10 | 349 | 68 | 407 | 0.0 | 598 |
| MS.gene95562.t1 | AT2G32430 | 80.000 | 340 | 68 | 0 | 10 | 349 | 70 | 409 | 0.0 | 570 |
| MS.gene95562.t1 | AT4G26940 | 78.378 | 333 | 71 | 1 | 17 | 349 | 76 | 407 | 0.0 | 544 |
| MS.gene95562.t1 | AT1G05170 | 78.694 | 291 | 62 | 0 | 10 | 300 | 68 | 358 | 6.04e-177 | 495 |
| MS.gene95562.t1 | AT1G32930 | 65.607 | 346 | 116 | 2 | 4 | 349 | 57 | 399 | 7.83e-175 | 491 |
| MS.gene95562.t1 | AT1G11730 | 68.868 | 318 | 93 | 1 | 31 | 348 | 72 | 383 | 3.35e-171 | 481 |
| MS.gene95562.t1 | AT1G77810 | 63.112 | 347 | 111 | 3 | 4 | 347 | 50 | 382 | 1.17e-167 | 473 |
| MS.gene95562.t1 | AT1G77810 | 62.571 | 350 | 111 | 4 | 4 | 347 | 50 | 385 | 2.99e-165 | 466 |
| MS.gene95562.t1 | AT1G33430 | 63.006 | 346 | 117 | 4 | 5 | 349 | 58 | 393 | 3.18e-159 | 451 |
| MS.gene95562.t1 | AT1G33430 | 61.582 | 354 | 117 | 5 | 5 | 349 | 58 | 401 | 3.16e-156 | 444 |
| MS.gene95562.t1 | AT1G22015 | 59.312 | 349 | 135 | 2 | 4 | 349 | 51 | 395 | 2.24e-154 | 439 |
| MS.gene95562.t1 | AT1G33430 | 64.228 | 246 | 82 | 3 | 20 | 264 | 68 | 308 | 2.79e-105 | 311 |
| MS.gene95562.t1 | AT4G26940 | 73.301 | 206 | 55 | 0 | 17 | 222 | 76 | 281 | 3.03e-102 | 303 |
| MS.gene95562.t1 | AT5G53340 | 45.620 | 274 | 134 | 6 | 40 | 312 | 76 | 335 | 8.05e-79 | 245 |
| MS.gene95562.t1 | AT5G53340 | 46.899 | 258 | 129 | 4 | 40 | 296 | 76 | 326 | 1.22e-78 | 244 |
| MS.gene95562.t1 | AT4G32120 | 45.802 | 262 | 130 | 6 | 38 | 298 | 85 | 335 | 3.88e-71 | 225 |
| MS.gene95562.t1 | AT2G25300 | 43.511 | 262 | 136 | 5 | 38 | 298 | 8 | 258 | 9.56e-70 | 219 |
| MS.gene95562.t1 | AT2G25300 | 43.969 | 257 | 130 | 5 | 43 | 298 | 93 | 336 | 1.25e-68 | 219 |
| MS.gene95562.t1 | AT2G26100 | 37.023 | 262 | 148 | 7 | 77 | 335 | 107 | 354 | 8.88e-52 | 176 |
| MS.gene95562.t1 | AT1G53290 | 34.601 | 263 | 155 | 7 | 77 | 336 | 83 | 331 | 1.89e-48 | 166 |
| MS.gene95562.t1 | AT3G14960 | 34.100 | 261 | 155 | 7 | 77 | 334 | 81 | 327 | 3.40e-48 | 166 |
| MS.gene95562.t1 | AT2G26100 | 37.607 | 234 | 136 | 5 | 77 | 308 | 107 | 332 | 7.05e-47 | 163 |
Find 75 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATAGGAGCTTGGTTTAT+TGG | 0.210268 | 4.3:-50708544 | MS.gene95562:CDS |
| TTGCCACTGCTGTGAGCTTA+TGG | 0.241789 | 4.3:-50709257 | MS.gene95562:CDS |
| CATTGGAAGTTTGGCGAGTC+TGG | 0.279395 | 4.3:-50708770 | MS.gene95562:CDS |
| TTTATGGAGTGCTTCTTTCT+AGG | 0.298948 | 4.3:-50707980 | None:intergenic |
| GAGAAGGTGAAAATGCTTTA+TGG | 0.301896 | 4.3:-50707996 | MS.gene95562:CDS |
| GAACCTGAGCATTGGAAGTT+TGG | 0.307392 | 4.3:-50708779 | MS.gene95562:CDS |
| TCCAATTTAGTTACAAGATC+TGG | 0.320538 | 4.3:-50710382 | MS.gene95562:intron |
| ATTGTCATGCGCTTTGTAAT+TGG | 0.344864 | 4.3:-50709840 | MS.gene95562:CDS |
| CTCCTGTTTCAGAAGATATA+AGG | 0.357539 | 4.3:-50710120 | MS.gene95562:CDS |
| TTGTCTTTGCTGACAATTCA+AGG | 0.362315 | 4.3:+50709289 | None:intergenic |
| TTTGTGTTGCTTCATTTGAT+TGG | 0.363073 | 4.3:-50708077 | MS.gene95562:CDS |
| GAAAAGAAGGGACTCGGTTC+GGG | 0.366676 | 4.3:-50710029 | MS.gene95562:CDS |
| TGCCACTGCTGTGAGCTTAT+GGG | 0.367282 | 4.3:-50709256 | MS.gene95562:CDS |
| TACATTGGATGCATGAAATC+TGG | 0.384729 | 4.3:-50708915 | MS.gene95562:CDS |
| GTCCTTATATCTTCTGAAAC+AGG | 0.385267 | 4.3:+50710118 | None:intergenic |
| GGAAAAGAAGGGACTCGGTT+CGG | 0.389458 | 4.3:-50710030 | MS.gene95562:CDS |
| ACTTCCAATGCTCAGGTTCA+TGG | 0.389694 | 4.3:+50708783 | None:intergenic |
| AGACCGACAGCTTCAGAAAC+TGG | 0.394152 | 4.3:-50710544 | MS.gene95562:intron |
| CTGCTTCAATAGCTCTATCT+AGG | 0.425000 | 4.3:+50709516 | None:intergenic |
| GTACATAGAAGGTGTGGAGA+AGG | 0.442264 | 4.3:-50708012 | MS.gene95562:CDS |
| GGAGCTGCAGTGGAATTTGT+AGG | 0.445573 | 4.3:-50708056 | MS.gene95562:CDS |
| TTAATACTGCCTTTAGCAGC+AGG | 0.450178 | 4.3:-50710051 | MS.gene95562:CDS |
| GATGATGTTCATGTAAATAT+AGG | 0.452270 | 4.3:-50709207 | MS.gene95562:intron |
| GGGACTCGGTTCGGGCTACT+TGG | 0.454841 | 4.3:-50710021 | MS.gene95562:CDS |
| TTTATGCAGAATCATGTTGA+AGG | 0.456059 | 4.3:-50709315 | MS.gene95562:intron |
| TCCTATTGACACATCCTCAT+TGG | 0.456204 | 4.3:+50708558 | None:intergenic |
| CTTTGCTGTGGCACTCCTCC+AGG | 0.460318 | 4.3:-50708490 | MS.gene95562:intron |
| GGATTAAAGAAGTACATAGA+AGG | 0.469286 | 4.3:-50708023 | MS.gene95562:CDS |
| GAATTTGTAGGTCCGCTGAT+AGG | 0.469957 | 4.3:-50708044 | MS.gene95562:CDS |
| CCTTTAGCAGCAGGAAAAGA+AGG | 0.471407 | 4.3:-50710042 | MS.gene95562:CDS |
| AAGTACTTCCGCCATGCCAC+AGG | 0.472843 | 4.3:-50708743 | MS.gene95562:CDS |
| GGGCAAGAGAAAGTACCTTA+TGG | 0.476193 | 4.3:-50710083 | MS.gene95562:CDS |
| CTGTATTGAATGTAGAGCTT+TGG | 0.481497 | 4.3:-50710215 | MS.gene95562:intron |
| GCATGGAGATTTCTTGAGGC+TGG | 0.488147 | 4.3:-50709483 | MS.gene95562:intron |
| TCGCCAAACTTCCAATGCTC+AGG | 0.496491 | 4.3:+50708776 | None:intergenic |
| GCCAATGAGGATGTGTCAAT+AGG | 0.497688 | 4.3:-50708559 | MS.gene95562:CDS |
| TTCAAATTTAGAGATGGACT+TGG | 0.502922 | 4.3:-50710182 | MS.gene95562:CDS |
| GAGTGCCACAGCAAAGTCTT+CGG | 0.512041 | 4.3:+50708497 | None:intergenic |
| TATTAATACCTACGACCATA+AGG | 0.514517 | 4.3:+50710068 | None:intergenic |
| GATGGACTTGGCTGCTGCGA+GGG | 0.515443 | 4.3:-50710170 | MS.gene95562:CDS |
| GACTATTTCAAATTTAGAGA+TGG | 0.518519 | 4.3:-50710188 | MS.gene95562:CDS |
| TCAAAACAACGGATATACAT+TGG | 0.538752 | 4.3:-50708930 | MS.gene95562:CDS |
| CAGCAGGAAAAGAAGGGACT+CGG | 0.538952 | 4.3:-50710035 | MS.gene95562:CDS |
| CGGGCTACTTGGTTGCCACA+AGG | 0.540034 | 4.3:-50710010 | MS.gene95562:intron |
| TGCGAATGGAAAGCGCAAGC+AGG | 0.542254 | 4.3:-50708105 | MS.gene95562:CDS |
| TATAAGGACGACTGAGTCGA+CGG | 0.542612 | 4.3:-50710104 | MS.gene95562:CDS |
| TCATTTGATTGGAGCTGCAG+TGG | 0.544715 | 4.3:-50708066 | MS.gene95562:CDS |
| AGGATGTGTCAATAGGAGCT+TGG | 0.557584 | 4.3:-50708552 | MS.gene95562:CDS |
| CGCGAAACTAGAGATATGTA+TGG | 0.560067 | 4.3:-50710351 | MS.gene95562:CDS |
| GATACCATGAACCTGAGCAT+TGG | 0.565176 | 4.3:-50708787 | MS.gene95562:CDS |
| AAGAAACTAGAGGAAGAGAA+AGG | 0.565582 | 4.3:-50709864 | MS.gene95562:CDS |
| TTACCAGTTTCTGAAGCTGT+CGG | 0.571354 | 4.3:+50710541 | None:intergenic |
| AGTTACAAGATCTGGAAATG+AGG | 0.572395 | 4.3:-50710374 | MS.gene95562:CDS |
| TTAACTAGTGCTACATCAGG+AGG | 0.577145 | 4.3:-50709542 | MS.gene95562:intron |
| AGATAGAGCTATTGAAGCAG+AGG | 0.580020 | 4.3:-50709513 | MS.gene95562:CDS |
| CATACAACTGCCCTGTGGCA+TGG | 0.582197 | 4.3:+50708732 | None:intergenic |
| CTTTAGCAGCAGGAAAAGAA+GGG | 0.584908 | 4.3:-50710041 | MS.gene95562:CDS |
| AAAGAAGTACATAGAAGGTG+TGG | 0.587665 | 4.3:-50708018 | MS.gene95562:CDS |
| GAAGCAGAGGACAGAAAGCA+TGG | 0.588213 | 4.3:-50709500 | MS.gene95562:CDS |
| TACTTCTTTAATCCTATCAG+CGG | 0.588432 | 4.3:+50708032 | None:intergenic |
| AGAAAGTACCTTATGGTCGT+AGG | 0.607267 | 4.3:-50710076 | MS.gene95562:CDS |
| ATCCCATAAGCTCACAGCAG+TGG | 0.610258 | 4.3:+50709254 | None:intergenic |
| GAAAGCATGGAGATTTCTTG+AGG | 0.614966 | 4.3:-50709487 | MS.gene95562:CDS |
| TTGGTTTATTGGACTTGACG+TGG | 0.621784 | 4.3:-50708533 | MS.gene95562:CDS |
| AGATGGACTTGGCTGCTGCG+AGG | 0.622009 | 4.3:-50710171 | MS.gene95562:CDS |
| TGCGCTTTGTAATTGGACAC+AGG | 0.622431 | 4.3:-50709833 | MS.gene95562:intron |
| ATAAGGACGACTGAGTCGAC+GGG | 0.634555 | 4.3:-50710103 | MS.gene95562:CDS |
| AGTACTTCCGCCATGCCACA+GGG | 0.639704 | 4.3:-50708742 | MS.gene95562:CDS |
| TCTTCATAAGTATGCCAATG+AGG | 0.642056 | 4.3:-50708572 | MS.gene95562:CDS |
| TGACAAAAGAAAGAAACTAG+AGG | 0.651999 | 4.3:-50709874 | MS.gene95562:CDS |
| GTTCAAGAGTCAGTACGAAG+TGG | 0.682952 | 4.3:-50710145 | MS.gene95562:CDS |
| TTAGACACCGATCAAAACAA+CGG | 0.706941 | 4.3:-50708941 | MS.gene95562:CDS |
| ACAACTGCCCTGTGGCATGG+CGG | 0.712956 | 4.3:+50708735 | None:intergenic |
| GATGACCGAAGACTTTGCTG+TGG | 0.746568 | 4.3:-50708502 | MS.gene95562:CDS |
| AATAGCATACAACTGCCCTG+TGG | 0.783392 | 4.3:+50708727 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAATATTATTATATTGTT+AGG | + | chr4.3:50709462-50709481 | None:intergenic | 10.0% |
| !! | CATACAAAAATAATAATAAT+TGG | + | chr4.3:50708282-50708301 | None:intergenic | 10.0% |
| !!! | TAATTTTTTTTTTTGAAGAA+CGG | - | chr4.3:50708923-50708942 | MS.gene95562:CDS | 10.0% |
| !!! | AAATTATTCTTTGATTTAGT+AGG | + | chr4.3:50709876-50709895 | None:intergenic | 15.0% |
| !!! | AAATTTTTTGTAATGAATCA+AGG | - | chr4.3:50709667-50709686 | MS.gene95562:intron | 15.0% |
| !!! | AAGTATACATTTTTTAAAAC+TGG | + | chr4.3:50709199-50709218 | None:intergenic | 15.0% |
| !! | AGTTAACACTTTCAAATTAT+TGG | - | chr4.3:50710389-50710408 | MS.gene95562:intron | 20.0% |
| !! | ATAAGTTCAAATAAGTCAAT+CGG | + | chr4.3:50710136-50710155 | None:intergenic | 20.0% |
| !! | ATACAAACCTAAAAAGATAA+TGG | + | chr4.3:50710359-50710378 | None:intergenic | 20.0% |
| !! | ATCAAACTAAATCAAATCAA+TGG | - | chr4.3:50709896-50709915 | MS.gene95562:intron | 20.0% |
| !! | GATTCAAAATGCTTTAATAA+AGG | - | chr4.3:50708798-50708817 | MS.gene95562:CDS | 20.0% |
| !! | GTTAACACTTTCAAATTATT+GGG | - | chr4.3:50710390-50710409 | MS.gene95562:intron | 20.0% |
| !! | TACAAACCTAAAAAGATAAT+GGG | + | chr4.3:50710358-50710377 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTTTTATCAAGCA+AGG | + | chr4.3:50708078-50708097 | None:intergenic | 20.0% |
| !!! | CTATTTTATTACTAGTGTTA+CGG | - | chr4.3:50708600-50708619 | MS.gene95562:intron | 20.0% |
| !!! | TATACATTTTTTAAAACTGG+TGG | + | chr4.3:50709196-50709215 | None:intergenic | 20.0% |
| ! | AAAGATGAGAAAAGGAAAAT+CGG | + | chr4.3:50709123-50709142 | None:intergenic | 25.0% |
| ! | AAGTCATAACTCAACTATAT+TGG | - | chr4.3:50708891-50708910 | MS.gene95562:intron | 25.0% |
| ! | AATTAAGCTGTTTATCCAAA+CGG | - | chr4.3:50710331-50710350 | MS.gene95562:CDS | 25.0% |
| ! | ACTTATGACTGATAAATAGA+TGG | + | chr4.3:50708875-50708894 | None:intergenic | 25.0% |
| ! | ATACATATCTATAAACCAGT+AGG | - | chr4.3:50709849-50709868 | MS.gene95562:CDS | 25.0% |
| ! | GAAAAAACGTATAATTGATC+TGG | - | chr4.3:50708960-50708979 | MS.gene95562:CDS | 25.0% |
| ! | GACTATTTCAAATTTAGAGA+TGG | - | chr4.3:50708348-50708367 | MS.gene95562:intron | 25.0% |
| ! | GATGATGTTCATGTAAATAT+AGG | - | chr4.3:50709329-50709348 | MS.gene95562:intron | 25.0% |
| ! | GTATTACAAAAGATGAGAAA+AGG | + | chr4.3:50709131-50709150 | None:intergenic | 25.0% |
| ! | TGTTTGTATATGTTCATATC+AGG | - | chr4.3:50709936-50709955 | MS.gene95562:intron | 25.0% |
| !! | ATGTATGGTGAAGATTTTAA+GGG | - | chr4.3:50708200-50708219 | MS.gene95562:intron | 25.0% |
| !! | TATGTATGGTGAAGATTTTA+AGG | - | chr4.3:50708199-50708218 | MS.gene95562:intron | 25.0% |
| !!! | CTTTTGATAACATGGATAAT+AGG | - | chr4.3:50708639-50708658 | MS.gene95562:intron | 25.0% |
| !!! | GATTTGTTCTTTTGATAACA+TGG | - | chr4.3:50708631-50708650 | MS.gene95562:intron | 25.0% |
| !!! | GTTGTTTTTATAAGTTTTGC+TGG | + | chr4.3:50710244-50710263 | None:intergenic | 25.0% |
| !!! | TATTAAAGCATTTTGAATCG+TGG | + | chr4.3:50708797-50708816 | None:intergenic | 25.0% |
| AAACAGTAAGTTATATGCAG+TGG | - | chr4.3:50708233-50708252 | MS.gene95562:intron | 30.0% | |
| AAACCATAGAAGCAGATATA+TGG | + | chr4.3:50708566-50708585 | None:intergenic | 30.0% | |
| AAATTGAATGTAGTTTCCGA+GGG | - | chr4.3:50708016-50708035 | MS.gene95562:CDS | 30.0% | |
| AACCATAGAAGCAGATATAT+GGG | + | chr4.3:50708565-50708584 | None:intergenic | 30.0% | |
| AACCTAAATCATGGTTTGAA+CGG | + | chr4.3:50710108-50710127 | None:intergenic | 30.0% | |
| AAGATGAGAAAAGGAAAATC+GGG | + | chr4.3:50709122-50709141 | None:intergenic | 30.0% | |
| AATTCGAAAATTGTAAGCGT+CGG | - | chr4.3:50708043-50708062 | MS.gene95562:CDS | 30.0% | |
| ACACTTTCAAATTATTGGGT+TGG | - | chr4.3:50710394-50710413 | MS.gene95562:intron | 30.0% | |
| ACATTTGCAAGAATGCTTAT+TGG | - | chr4.3:50710168-50710187 | MS.gene95562:CDS | 30.0% | |
| AGATCTTGTAACTAAATTGG+AGG | + | chr4.3:50708155-50708174 | None:intergenic | 30.0% | |
| ATTAAGCTGTTTATCCAAAC+GGG | - | chr4.3:50710332-50710351 | MS.gene95562:CDS | 30.0% | |
| TAAATTGAATGTAGTTTCCG+AGG | - | chr4.3:50708015-50708034 | MS.gene95562:CDS | 30.0% | |
| TACTTCTTTAATCCTATCAG+CGG | + | chr4.3:50710507-50710526 | None:intergenic | 30.0% | |
| TATGCATAAGCATAACAACT+TGG | - | chr4.3:50709389-50709408 | MS.gene95562:intron | 30.0% | |
| TATTAATACCTACGACCATA+AGG | + | chr4.3:50708471-50708490 | None:intergenic | 30.0% | |
| TCAAAACAACGGATATACAT+TGG | - | chr4.3:50709606-50709625 | MS.gene95562:intron | 30.0% | |
| TCCAATTTAGTTACAAGATC+TGG | - | chr4.3:50708154-50708173 | MS.gene95562:intron | 30.0% | |
| TCCAGATCTTGTAACTAAAT+TGG | + | chr4.3:50708158-50708177 | None:intergenic | 30.0% | |
| TGACAAAAGAAAGAAACTAG+AGG | - | chr4.3:50708662-50708681 | MS.gene95562:intron | 30.0% | |
| TTCAAGAACAAATATTCACC+TGG | + | chr4.3:50710067-50710086 | None:intergenic | 30.0% | |
| TTGGACTTACAATTACATCA+TGG | + | chr4.3:50708263-50708282 | None:intergenic | 30.0% | |
| TTTATGCAGAATCATGTTGA+AGG | - | chr4.3:50709221-50709240 | MS.gene95562:CDS | 30.0% | |
| ! | AATTTTCGAATTACAACCCT+CGG | + | chr4.3:50708035-50708054 | None:intergenic | 30.0% |
| ! | CAACGATTTTGTTGCATAAT+TGG | - | chr4.3:50708744-50708763 | MS.gene95562:CDS | 30.0% |
| ! | GGAAGTAAGTTGAAAACTTA+TGG | + | chr4.3:50710212-50710231 | None:intergenic | 30.0% |
| ! | GGATTAAAGAAGTACATAGA+AGG | - | chr4.3:50710513-50710532 | MS.gene95562:intron | 30.0% |
| ! | TTATGTTTTCAGATTGCGAA+TGG | - | chr4.3:50710417-50710436 | MS.gene95562:intron | 30.0% |
| ! | TTCAAATTTAGAGATGGACT+TGG | - | chr4.3:50708354-50708373 | MS.gene95562:intron | 30.0% |
| !! | TTTGTGTTGCTTCATTTGAT+TGG | - | chr4.3:50710459-50710478 | MS.gene95562:intron | 30.0% |
| !! | TTTTTAACTAGTGCTACATC+AGG | - | chr4.3:50708991-50709010 | MS.gene95562:intron | 30.0% |
| !!! | AAATTTCTCACTTTTGAGAC+AGG | + | chr4.3:50709653-50709672 | None:intergenic | 30.0% |
| !!! | CAATCTTTTTCAGCAACATT+GGG | - | chr4.3:50709561-50709580 | MS.gene95562:intron | 30.0% |
| !!! | TCAATCTTTTTCAGCAACAT+TGG | - | chr4.3:50709560-50709579 | MS.gene95562:intron | 30.0% |
| !!! | TGTATATCCGTTGTTTTGAT+CGG | + | chr4.3:50709605-50709624 | None:intergenic | 30.0% |
| AAGAAACTAGAGGAAGAGAA+AGG | - | chr4.3:50708672-50708691 | MS.gene95562:intron | 35.0% | |
| AAGAACAAATATTCACCTGG+AGG | + | chr4.3:50710064-50710083 | None:intergenic | 35.0% | |
| ACAGCACATTTGCATTAGTT+TGG | + | chr4.3:50708305-50708324 | None:intergenic | 35.0% | |
| ACCTAAATCATGGTTTGAAC+GGG | + | chr4.3:50710107-50710126 | None:intergenic | 35.0% | |
| AGTTACAAGATCTGGAAATG+AGG | - | chr4.3:50708162-50708181 | MS.gene95562:intron | 35.0% | |
| ATCCCATATATCTGCTTCTA+TGG | - | chr4.3:50708560-50708579 | MS.gene95562:CDS | 35.0% | |
| ATTGTCATGCGCTTTGTAAT+TGG | - | chr4.3:50708696-50708715 | MS.gene95562:CDS | 35.0% | |
| CTCCTGTTTCAGAAGATATA+AGG | - | chr4.3:50708416-50708435 | MS.gene95562:intron | 35.0% | |
| CTGTATTGAATGTAGAGCTT+TGG | - | chr4.3:50708321-50708340 | MS.gene95562:intron | 35.0% | |
| GAGAAGGTGAAAATGCTTTA+TGG | - | chr4.3:50710540-50710559 | MS.gene95562:intron | 35.0% | |
| GAGCAGGATATTAAGACAAA+AGG | + | chr4.3:50709542-50709561 | None:intergenic | 35.0% | |
| GGATCAAATTATGAACCTTG+TGG | + | chr4.3:50708544-50708563 | None:intergenic | 35.0% | |
| TACATTGGATGCATGAAATC+TGG | - | chr4.3:50709621-50709640 | MS.gene95562:intron | 35.0% | |
| TCAATAGGAGCTTGGTTTAT+TGG | - | chr4.3:50709992-50710011 | MS.gene95562:intron | 35.0% | |
| TCTTCATAAGTATGCCAATG+AGG | - | chr4.3:50709964-50709983 | MS.gene95562:intron | 35.0% | |
| TTAGACACCGATCAAAACAA+CGG | - | chr4.3:50709595-50709614 | MS.gene95562:intron | 35.0% | |
| TTGTCTTTGCTGACAATTCA+AGG | + | chr4.3:50709250-50709269 | None:intergenic | 35.0% | |
| ! | AAAGAAGTACATAGAAGGTG+TGG | - | chr4.3:50710518-50710537 | MS.gene95562:intron | 35.0% |
| ! | TGTTCTTTTCTTGTGTCTGT+TGG | - | chr4.3:50708129-50708148 | MS.gene95562:intron | 35.0% |
| ! | TTTGATTTAGTAGGACCTAC+TGG | + | chr4.3:50709867-50709886 | None:intergenic | 35.0% |
| !! | GACACTGTCATTGCTTTTAA+AGG | - | chr4.3:50709154-50709173 | MS.gene95562:intron | 35.0% |
| !! | GTCCTTATATCTTCTGAAAC+AGG | + | chr4.3:50708421-50708440 | None:intergenic | 35.0% |
| !! | GTTTCTACATCGTGTTTTTG+AGG | - | chr4.3:50708766-50708785 | MS.gene95562:CDS | 35.0% |
| ACCCGTTCAAACCATGATTT+AGG | - | chr4.3:50710103-50710122 | MS.gene95562:CDS | 40.0% | |
| AGATAGAGCTATTGAAGCAG+AGG | - | chr4.3:50709023-50709042 | MS.gene95562:intron | 40.0% | |
| CGCGAAACTAGAGATATGTA+TGG | - | chr4.3:50708185-50708204 | MS.gene95562:intron | 40.0% | |
| CTTTAGCAGCAGGAAAAGAA+GGG | - | chr4.3:50708495-50708514 | MS.gene95562:CDS | 40.0% | |
| GTTGCTGAAAAAGATTGAGC+AGG | + | chr4.3:50709558-50709577 | None:intergenic | 40.0% | |
| TCCTATTGACACATCCTCAT+TGG | + | chr4.3:50709981-50710000 | None:intergenic | 40.0% | |
| TCGGAACAGAACCTAAATCA+TGG | + | chr4.3:50710117-50710136 | None:intergenic | 40.0% | |
| TGAGAAAAGGAAAATCGGGT+AGG | + | chr4.3:50709118-50709137 | None:intergenic | 40.0% | |
| TTAACTAGTGCTACATCAGG+AGG | - | chr4.3:50708994-50709013 | MS.gene95562:intron | 40.0% | |
| TTAATACTGCCTTTAGCAGC+AGG | - | chr4.3:50708485-50708504 | MS.gene95562:intron | 40.0% | |
| TTCTTACCTTGTTGCACAGA+GGG | - | chr4.3:50709722-50709741 | MS.gene95562:intron | 40.0% | |
| TTGGTTTATTGGACTTGACG+TGG | - | chr4.3:50710003-50710022 | MS.gene95562:intron | 40.0% | |
| ! | AACGGGCCCATTATCTTTTT+AGG | - | chr4.3:50710349-50710368 | MS.gene95562:CDS | 40.0% |
| ! | AAGTTTTGCTGGAGAGCTAA+TGG | + | chr4.3:50710233-50710252 | None:intergenic | 40.0% |
| ! | CTGCTTCAATAGCTCTATCT+AGG | + | chr4.3:50709023-50709042 | None:intergenic | 40.0% |
| ! | GAAAGCATGGAGATTTCTTG+AGG | - | chr4.3:50709049-50709068 | MS.gene95562:intron | 40.0% |
| !! | AAAAAGATAATGGGCCCGTT+TGG | + | chr4.3:50710349-50710368 | None:intergenic | 40.0% |
| !! | AGAAAGTACCTTATGGTCGT+AGG | - | chr4.3:50708460-50708479 | MS.gene95562:intron | 40.0% |
| !! | TTACCAGTTTCTGAAGCTGT+CGG | + | chr4.3:50707998-50708017 | None:intergenic | 40.0% |
| AATAGCATACAACTGCCCTG+TGG | + | chr4.3:50709812-50709831 | None:intergenic | 45.0% | |
| ACTTCCAATGCTCAGGTTCA+TGG | + | chr4.3:50709756-50709775 | None:intergenic | 45.0% | |
| AGGATGTGTCAATAGGAGCT+TGG | - | chr4.3:50709984-50710003 | MS.gene95562:intron | 45.0% | |
| CCTTTAGCAGCAGGAAAAGA+AGG | - | chr4.3:50708494-50708513 | MS.gene95562:CDS | 45.0% | |
| CTCTGTGCAACAAGGTAAGA+AGG | + | chr4.3:50709723-50709742 | None:intergenic | 45.0% | |
| CTTCTTACCTTGTTGCACAG+AGG | - | chr4.3:50709721-50709740 | MS.gene95562:intron | 45.0% | |
| GAATTTGTAGGTCCGCTGAT+AGG | - | chr4.3:50710492-50710511 | MS.gene95562:intron | 45.0% | |
| GATACCATGAACCTGAGCAT+TGG | - | chr4.3:50709749-50709768 | MS.gene95562:intron | 45.0% | |
| GCCAATGAGGATGTGTCAAT+AGG | - | chr4.3:50709977-50709996 | MS.gene95562:intron | 45.0% | |
| GTTCAAGAGTCAGTACGAAG+TGG | - | chr4.3:50708391-50708410 | MS.gene95562:intron | 45.0% | |
| TATAAGGACGACTGAGTCGA+CGG | - | chr4.3:50708432-50708451 | MS.gene95562:intron | 45.0% | |
| TCATTTGATTGGAGCTGCAG+TGG | - | chr4.3:50710470-50710489 | MS.gene95562:intron | 45.0% | |
| TCTTACCTTGTTGCACAGAG+GGG | - | chr4.3:50709723-50709742 | MS.gene95562:intron | 45.0% | |
| TGCGCTTTGTAATTGGACAC+AGG | - | chr4.3:50708703-50708722 | MS.gene95562:CDS | 45.0% | |
| ! | CCTTCTTTTCCTGCTGCTAA+AGG | + | chr4.3:50708497-50708516 | None:intergenic | 45.0% |
| ! | GTACATAGAAGGTGTGGAGA+AGG | - | chr4.3:50710524-50710543 | MS.gene95562:intron | 45.0% |
| !! | GAACCTGAGCATTGGAAGTT+TGG | - | chr4.3:50709757-50709776 | MS.gene95562:intron | 45.0% |
| !! | GGGCAAGAGAAAGTACCTTA+TGG | - | chr4.3:50708453-50708472 | MS.gene95562:intron | 45.0% |
| !!! | TCTCACTTTTGAGACAGGAC+AGG | + | chr4.3:50709648-50709667 | None:intergenic | 45.0% |
| AGACCGACAGCTTCAGAAAC+TGG | - | chr4.3:50707992-50708011 | MS.gene95562:CDS | 50.0% | |
| ATAAGGACGACTGAGTCGAC+GGG | - | chr4.3:50708433-50708452 | MS.gene95562:intron | 50.0% | |
| ATCCCATAAGCTCACAGCAG+TGG | + | chr4.3:50709285-50709304 | None:intergenic | 50.0% | |
| CAGCAGGAAAAGAAGGGACT+CGG | - | chr4.3:50708501-50708520 | MS.gene95562:CDS | 50.0% | |
| CATTGGAAGTTTGGCGAGTC+TGG | - | chr4.3:50709766-50709785 | MS.gene95562:intron | 50.0% | |
| GAAGCAGAGGACAGAAAGCA+TGG | - | chr4.3:50709036-50709055 | MS.gene95562:intron | 50.0% | |
| GAGTGCCACAGCAAAGTCTT+CGG | + | chr4.3:50710042-50710061 | None:intergenic | 50.0% | |
| GATGACCGAAGACTTTGCTG+TGG | - | chr4.3:50710034-50710053 | MS.gene95562:CDS | 50.0% | |
| GCATGGAGATTTCTTGAGGC+TGG | - | chr4.3:50709053-50709072 | MS.gene95562:intron | 50.0% | |
| GGAGCTGCAGTGGAATTTGT+AGG | - | chr4.3:50710480-50710499 | MS.gene95562:intron | 50.0% | |
| TCGCCAAACTTCCAATGCTC+AGG | + | chr4.3:50709763-50709782 | None:intergenic | 50.0% | |
| TCTTACCCCTCTGTGCAACA+AGG | + | chr4.3:50709731-50709750 | None:intergenic | 50.0% | |
| TGCCACTGCTGTGAGCTTAT+GGG | - | chr4.3:50709280-50709299 | MS.gene95562:CDS | 50.0% | |
| TTGCCACTGCTGTGAGCTTA+TGG | - | chr4.3:50709279-50709298 | MS.gene95562:CDS | 50.0% | |
| ! | GAAAAGAAGGGACTCGGTTC+GGG | - | chr4.3:50708507-50708526 | MS.gene95562:CDS | 50.0% |
| ! | GGAAAAGAAGGGACTCGGTT+CGG | - | chr4.3:50708506-50708525 | MS.gene95562:CDS | 50.0% |
| AAGTACTTCCGCCATGCCAC+AGG | - | chr4.3:50709793-50709812 | MS.gene95562:intron | 55.0% | |
| AGTACTTCCGCCATGCCACA+GGG | - | chr4.3:50709794-50709813 | MS.gene95562:intron | 55.0% | |
| CATACAACTGCCCTGTGGCA+TGG | + | chr4.3:50709807-50709826 | None:intergenic | 55.0% | |
| ! | TGCGAATGGAAAGCGCAAGC+AGG | - | chr4.3:50710431-50710450 | MS.gene95562:intron | 55.0% |
| ACAACTGCCCTGTGGCATGG+CGG | + | chr4.3:50709804-50709823 | None:intergenic | 60.0% | |
| CGGGCTACTTGGTTGCCACA+AGG | - | chr4.3:50708526-50708545 | MS.gene95562:CDS | 60.0% | |
| ! | AGATGGACTTGGCTGCTGCG+AGG | - | chr4.3:50708365-50708384 | MS.gene95562:intron | 60.0% |
| ! | CTTTGCTGTGGCACTCCTCC+AGG | - | chr4.3:50710046-50710065 | MS.gene95562:CDS | 60.0% |
| ! | GATGGACTTGGCTGCTGCGA+GGG | - | chr4.3:50708366-50708385 | MS.gene95562:intron | 60.0% |
| !! | GGGACTCGGTTCGGGCTACT+TGG | - | chr4.3:50708515-50708534 | MS.gene95562:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 50707981 | 50710577 | 50707981 | ID=MS.gene95562 |
| chr4.3 | mRNA | 50707981 | 50710577 | 50707981 | ID=MS.gene95562.t1;Parent=MS.gene95562 |
| chr4.3 | exon | 50710545 | 50710577 | 50710545 | ID=MS.gene95562.t1.exon1;Parent=MS.gene95562.t1 |
| chr4.3 | CDS | 50710545 | 50710577 | 50710545 | ID=cds.MS.gene95562.t1;Parent=MS.gene95562.t1 |
| chr4.3 | exon | 50710321 | 50710394 | 50710321 | ID=MS.gene95562.t1.exon2;Parent=MS.gene95562.t1 |
| chr4.3 | CDS | 50710321 | 50710394 | 50710321 | ID=cds.MS.gene95562.t1;Parent=MS.gene95562.t1 |
| chr4.3 | exon | 50710011 | 50710222 | 50710011 | ID=MS.gene95562.t1.exon3;Parent=MS.gene95562.t1 |
| chr4.3 | CDS | 50710011 | 50710222 | 50710011 | ID=cds.MS.gene95562.t1;Parent=MS.gene95562.t1 |
| chr4.3 | exon | 50709834 | 50709897 | 50709834 | ID=MS.gene95562.t1.exon4;Parent=MS.gene95562.t1 |
| chr4.3 | CDS | 50709834 | 50709897 | 50709834 | ID=cds.MS.gene95562.t1;Parent=MS.gene95562.t1 |
| chr4.3 | exon | 50709484 | 50709556 | 50709484 | ID=MS.gene95562.t1.exon5;Parent=MS.gene95562.t1 |
| chr4.3 | CDS | 50709484 | 50709556 | 50709484 | ID=cds.MS.gene95562.t1;Parent=MS.gene95562.t1 |
| chr4.3 | exon | 50709208 | 50709328 | 50709208 | ID=MS.gene95562.t1.exon6;Parent=MS.gene95562.t1 |
| chr4.3 | CDS | 50709208 | 50709328 | 50709208 | ID=cds.MS.gene95562.t1;Parent=MS.gene95562.t1 |
| chr4.3 | exon | 50708897 | 50708984 | 50708897 | ID=MS.gene95562.t1.exon7;Parent=MS.gene95562.t1 |
| chr4.3 | CDS | 50708897 | 50708984 | 50708897 | ID=cds.MS.gene95562.t1;Parent=MS.gene95562.t1 |
| chr4.3 | exon | 50708692 | 50708817 | 50708692 | ID=MS.gene95562.t1.exon8;Parent=MS.gene95562.t1 |
| chr4.3 | CDS | 50708692 | 50708817 | 50708692 | ID=cds.MS.gene95562.t1;Parent=MS.gene95562.t1 |
| chr4.3 | exon | 50708491 | 50708600 | 50708491 | ID=MS.gene95562.t1.exon9;Parent=MS.gene95562.t1 |
| chr4.3 | CDS | 50708491 | 50708600 | 50708491 | ID=cds.MS.gene95562.t1;Parent=MS.gene95562.t1 |
| chr4.3 | exon | 50707981 | 50708129 | 50707981 | ID=MS.gene95562.t1.exon10;Parent=MS.gene95562.t1 |
| chr4.3 | CDS | 50707981 | 50708129 | 50707981 | ID=cds.MS.gene95562.t1;Parent=MS.gene95562.t1 |
| Gene Sequence |
| Protein sequence |
