Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31433.t1 | XP_013465149.1 | 64.8 | 264 | 72 | 3 | 1 | 264 | 1 | 243 | 2.00E-49 | 206.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31433.t1 | A0A072VAX8 | 64.8 | 264 | 72 | 3 | 1 | 264 | 1 | 243 | 1.5e-49 | 206.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene31433 | 0.830046 | 3.66E-55 | -1.69E-46 |
| MS.gene049254 | MS.gene31433 | 0.814218 | 1.72E-51 | -1.69E-46 |
| MS.gene049350 | MS.gene31433 | 0.831753 | 1.40E-55 | -1.69E-46 |
| MS.gene049404 | MS.gene31433 | 0.822072 | 2.88E-53 | -1.69E-46 |
| MS.gene049501 | MS.gene31433 | 0.80356 | 3.29E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene31433 | 0.859007 | 5.57E-63 | -1.69E-46 |
| MS.gene049807 | MS.gene31433 | 0.818239 | 2.17E-52 | -1.69E-46 |
| MS.gene049821 | MS.gene31433 | 0.800757 | 1.24E-48 | -1.69E-46 |
| MS.gene049824 | MS.gene31433 | 0.806352 | 8.58E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene31433 | 0.803382 | 3.58E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene31433 | 0.830405 | 2.99E-55 | -1.69E-46 |
| MS.gene050026 | MS.gene31433 | 0.811553 | 6.61E-51 | -1.69E-46 |
| MS.gene050221 | MS.gene31433 | 0.804869 | 1.76E-49 | -1.69E-46 |
| MS.gene050241 | MS.gene31433 | 0.834936 | 2.25E-56 | -1.69E-46 |
| MS.gene050273 | MS.gene31433 | 0.816876 | 4.41E-52 | -1.69E-46 |
| MS.gene050559 | MS.gene31433 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene31433 | 0.807298 | 5.41E-50 | -1.69E-46 |
| MS.gene050657 | MS.gene31433 | 0.831097 | 2.03E-55 | -1.69E-46 |
| MS.gene050807 | MS.gene31433 | 0.823163 | 1.61E-53 | -1.69E-46 |
| MS.gene050808 | MS.gene31433 | 0.807389 | 5.18E-50 | -1.69E-46 |
| MS.gene050901 | MS.gene31433 | 0.831817 | 1.35E-55 | -1.69E-46 |
| MS.gene051018 | MS.gene31433 | 0.834342 | 3.17E-56 | -1.69E-46 |
| MS.gene051021 | MS.gene31433 | 0.836744 | 7.82E-57 | -1.69E-46 |
| MS.gene051198 | MS.gene31433 | 0.803803 | 2.93E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene31433 | 0.822934 | 1.82E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene31433 | 0.852833 | 3.56E-61 | -1.69E-46 |
| MS.gene051388 | MS.gene31433 | 0.820706 | 5.95E-53 | -1.69E-46 |
| MS.gene05155 | MS.gene31433 | 0.801226 | 9.95E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene31433 | 0.832974 | 6.96E-56 | -1.69E-46 |
| MS.gene051664 | MS.gene31433 | 0.807807 | 4.22E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene31433 | 0.900569 | 6.42E-78 | -1.69E-46 |
| MS.gene051720 | MS.gene31433 | 0.898601 | 4.52E-77 | -1.69E-46 |
| MS.gene051744 | MS.gene31433 | 0.843414 | 1.42E-58 | -1.69E-46 |
| MS.gene051957 | MS.gene31433 | 0.812042 | 5.17E-51 | -1.69E-46 |
| MS.gene052037 | MS.gene31433 | 0.800377 | 1.48E-48 | -1.69E-46 |
| MS.gene052133 | MS.gene31433 | 0.800887 | 1.17E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene31433 | 0.825567 | 4.37E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene31433 | 0.832384 | 9.75E-56 | -1.69E-46 |
| MS.gene052519 | MS.gene31433 | 0.831634 | 1.49E-55 | -1.69E-46 |
| MS.gene052561 | MS.gene31433 | 0.825812 | 3.82E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene31433 | 0.807186 | 5.72E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene31433 | 0.815366 | 9.59E-52 | -1.69E-46 |
| MS.gene052665 | MS.gene31433 | 0.800814 | 1.21E-48 | -1.69E-46 |
| MS.gene052732 | MS.gene31433 | 0.823562 | 1.30E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene31433 | 0.805966 | 1.03E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene31433 | 0.811086 | 8.35E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene31433 | 0.810381 | 1.19E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene31433 | 0.811153 | 8.07E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene31433 | 0.884076 | 2.61E-71 | -1.69E-46 |
| MS.gene053164 | MS.gene31433 | 0.839622 | 1.42E-57 | -1.69E-46 |
| MS.gene053171 | MS.gene31433 | 0.813322 | 2.71E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene31433 | 0.83575 | 1.40E-56 | -1.69E-46 |
| MS.gene053536 | MS.gene31433 | 0.816046 | 6.77E-52 | -1.69E-46 |
| MS.gene053538 | MS.gene31433 | 0.816191 | 6.28E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene31433 | 0.866153 | 3.51E-65 | -1.69E-46 |
| MS.gene053599 | MS.gene31433 | 0.816739 | 4.73E-52 | -1.69E-46 |
| MS.gene053883 | MS.gene31433 | 0.8301 | 3.55E-55 | -1.69E-46 |
| MS.gene05422 | MS.gene31433 | 0.803285 | 3.75E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene31433 | 0.849211 | 3.74E-60 | -1.69E-46 |
| MS.gene054584 | MS.gene31433 | 0.878345 | 3.03E-69 | -1.69E-46 |
| MS.gene05458 | MS.gene31433 | 0.829412 | 5.22E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene31433 | 0.864341 | 1.30E-64 | -1.69E-46 |
| MS.gene054775 | MS.gene31433 | 0.830073 | 3.61E-55 | -1.69E-46 |
| MS.gene054801 | MS.gene31433 | 0.805828 | 1.11E-49 | -1.69E-46 |
| MS.gene054991 | MS.gene31433 | 0.821137 | 4.74E-53 | -1.69E-46 |
| MS.gene055083 | MS.gene31433 | 0.825121 | 5.57E-54 | -1.69E-46 |
| MS.gene055103 | MS.gene31433 | 0.808263 | 3.38E-50 | -1.69E-46 |
| MS.gene055144 | MS.gene31433 | 0.81696 | 4.22E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene31433 | 0.807636 | 4.59E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene31433 | 0.875685 | 2.54E-68 | -1.69E-46 |
| MS.gene055466 | MS.gene31433 | 0.879318 | 1.37E-69 | -1.69E-46 |
| MS.gene055468 | MS.gene31433 | 0.863415 | 2.53E-64 | -1.69E-46 |
| MS.gene055469 | MS.gene31433 | 0.824731 | 6.89E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene31433 | 0.813224 | 2.85E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene31433 | 0.85997 | 2.86E-63 | -1.69E-46 |
| MS.gene055580 | MS.gene31433 | -0.864085 | 1.57E-64 | -1.69E-46 |
| MS.gene055778 | MS.gene31433 | 0.821361 | 4.21E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene31433 | 0.815673 | 8.19E-52 | -1.69E-46 |
| MS.gene055890 | MS.gene31433 | 0.813691 | 2.25E-51 | -1.69E-46 |
| MS.gene055891 | MS.gene31433 | 0.822128 | 2.80E-53 | -1.69E-46 |
| MS.gene056005 | MS.gene31433 | 0.810382 | 1.19E-50 | -1.69E-46 |
| MS.gene056043 | MS.gene31433 | -0.837536 | 4.91E-57 | -1.69E-46 |
| MS.gene056050 | MS.gene31433 | 0.839236 | 1.79E-57 | -1.69E-46 |
| MS.gene056173 | MS.gene31433 | 0.812422 | 4.27E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene31433 | 0.816428 | 5.56E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene31433 | 0.82232 | 2.52E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene31433 | 0.832669 | 8.28E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene31433 | 0.804826 | 1.79E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene31433 | 0.823004 | 1.75E-53 | -1.69E-46 |
| MS.gene056859 | MS.gene31433 | 0.806793 | 6.92E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene31433 | 0.814718 | 1.34E-51 | -1.69E-46 |
| MS.gene057294 | MS.gene31433 | 0.852564 | 4.25E-61 | -1.69E-46 |
| MS.gene057444 | MS.gene31433 | 0.836243 | 1.05E-56 | -1.69E-46 |
| MS.gene057921 | MS.gene31433 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene31433 | 0.806918 | 6.51E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene31433 | 0.804537 | 2.06E-49 | -1.69E-46 |
| MS.gene058087 | MS.gene31433 | 0.82263 | 2.14E-53 | -1.69E-46 |
| MS.gene058339 | MS.gene31433 | 0.836645 | 8.29E-57 | -1.69E-46 |
| MS.gene05847 | MS.gene31433 | 0.801315 | 9.54E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene31433 | 0.871751 | 5.38E-67 | -1.69E-46 |
| MS.gene058649 | MS.gene31433 | 0.805625 | 1.22E-49 | -1.69E-46 |
| MS.gene058668 | MS.gene31433 | 0.805328 | 1.41E-49 | -1.69E-46 |
| MS.gene05894 | MS.gene31433 | 0.829948 | 3.87E-55 | -1.69E-46 |
| MS.gene059015 | MS.gene31433 | 0.834369 | 3.12E-56 | -1.69E-46 |
| MS.gene059084 | MS.gene31433 | 0.829751 | 4.32E-55 | -1.69E-46 |
| MS.gene059272 | MS.gene31433 | 0.829081 | 6.28E-55 | -1.69E-46 |
| MS.gene059426 | MS.gene31433 | 0.806121 | 9.59E-50 | -1.69E-46 |
| MS.gene059460 | MS.gene31433 | 0.817199 | 3.73E-52 | -1.69E-46 |
| MS.gene059570 | MS.gene31433 | 0.821844 | 3.25E-53 | -1.69E-46 |
| MS.gene059602 | MS.gene31433 | 0.810532 | 1.10E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene31433 | 0.850749 | 1.39E-60 | -1.69E-46 |
| MS.gene059863 | MS.gene31433 | 0.804593 | 2.01E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene31433 | 0.80093 | 1.14E-48 | -1.69E-46 |
| MS.gene060519 | MS.gene31433 | 0.867503 | 1.30E-65 | -1.69E-46 |
| MS.gene060587 | MS.gene31433 | 0.841416 | 4.81E-58 | -1.69E-46 |
| MS.gene060603 | MS.gene31433 | 0.833891 | 4.11E-56 | -1.69E-46 |
| MS.gene060884 | MS.gene31433 | 0.81115 | 8.08E-51 | -1.69E-46 |
| MS.gene060886 | MS.gene31433 | 0.804007 | 2.66E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene31433 | 0.816715 | 4.79E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31433.t1 | MTR_2g090660 | 87.879 | 264 | 11 | 3 | 1 | 264 | 1 | 243 | 6.68e-131 | 370 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31433.t1 | AT1G03820 | 27.719 | 285 | 122 | 7 | 1 | 264 | 1 | 222 | 1.24e-12 | 65.9 |
Find 38 sgRNAs with CRISPR-Local
Find 52 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAGTGACACAAGATTTC+TGG | 0.224853 | 2.4:+9861921 | MS.gene31433:CDS |
| GAGAAGTATAACAACGTTAA+TGG | 0.257730 | 2.4:+9861982 | MS.gene31433:CDS |
| TTTCCTTGGTTGGAGAATAT+TGG | 0.318029 | 2.4:-9861645 | None:intergenic |
| AACGTTAATGGATATGAATC+AGG | 0.326674 | 2.4:+9861994 | MS.gene31433:CDS |
| TCAAAATGAGTTTGAGACTA+TGG | 0.340281 | 2.4:+9862062 | MS.gene31433:CDS |
| ACCGGTGCTGGTGCCGGTGC+TGG | 0.371432 | 2.4:-9861490 | None:intergenic |
| GCAGCTGCAGGTTCTTGTGC+TGG | 0.400119 | 2.4:-9861520 | None:intergenic |
| GTCGAAACAGGAAACGGTTA+CGG | 0.431424 | 2.4:+9861601 | MS.gene31433:CDS |
| GGAAACGGTTACGGTCTCTA+TGG | 0.434656 | 2.4:+9861610 | MS.gene31433:CDS |
| ACAATCTCTGGTGCAGCTGC+AGG | 0.454852 | 2.4:-9861532 | None:intergenic |
| TCTTGTGCTGGTGCTGATAC+CGG | 0.463050 | 2.4:-9861508 | None:intergenic |
| TTGAGGGTCTTCAACATTGT+GGG | 0.464139 | 2.4:-9861455 | None:intergenic |
| GACACAAGATTTCTGGAGAA+TGG | 0.469127 | 2.4:+9861928 | MS.gene31433:CDS |
| GTATCAACTACTCTACCTTC+AGG | 0.472495 | 2.4:+9861553 | MS.gene31433:CDS |
| GCTGGTGCTGATACCGGTGC+TGG | 0.477279 | 2.4:-9861502 | None:intergenic |
| GCTGATACCGGTGCTGGTGC+CGG | 0.484693 | 2.4:-9861496 | None:intergenic |
| AGAGTAGTTGATACAATCTC+TGG | 0.485770 | 2.4:-9861544 | None:intergenic |
| AACAATTACAACAGCTACAA+TGG | 0.499851 | 2.4:+9861847 | MS.gene31433:CDS |
| CTGGAGATTGAGGTAATTGA+GGG | 0.513332 | 2.4:-9861471 | None:intergenic |
| TCCAGCACCGGCACCAGCAC+CGG | 0.523732 | 2.4:+9861489 | MS.gene31433:CDS |
| GCTGGAGATTGAGGTAATTG+AGG | 0.526485 | 2.4:-9861472 | None:intergenic |
| GGTTCTGGTGCTGGTCCTGA+AGG | 0.535734 | 2.4:-9861568 | None:intergenic |
| TTGTTGCGGAAGTTTGTTTG+AGG | 0.543740 | 2.4:-9861781 | None:intergenic |
| ATTGAGGGTCTTCAACATTG+TGG | 0.549263 | 2.4:-9861456 | None:intergenic |
| AGGGTCTTCAACATTGTGGG+TGG | 0.554411 | 2.4:-9861452 | None:intergenic |
| TAGCTTGAATTTGGGGTGAG+AGG | 0.561749 | 2.4:-9861390 | None:intergenic |
| TAGCCAATATTCTCCAACCA+AGG | 0.580385 | 2.4:+9861642 | MS.gene31433:CDS |
| AACAACAATTATGAGAGGAA+AGG | 0.589017 | 2.4:+9861892 | MS.gene31433:CDS |
| AATTATGAGAGGAAAGGAGA+AGG | 0.592187 | 2.4:+9861898 | MS.gene31433:CDS |
| AATGGATATGAATCAGGGAG+AGG | 0.596788 | 2.4:+9862000 | MS.gene31433:CDS |
| GGTGCCGGTGCTGGAGATTG+AGG | 0.597375 | 2.4:-9861481 | None:intergenic |
| ATTACCTCAATCTCCAGCAC+CGG | 0.607846 | 2.4:+9861477 | MS.gene31433:CDS |
| AGAGGAAGCACTGAAAATGA+AGG | 0.608381 | 2.4:+9862018 | MS.gene31433:CDS |
| TGTACACTTCATTGTTGTTG+CGG | 0.612560 | 2.4:-9861795 | None:intergenic |
| TTACAACAGCTACAATGGAA+AGG | 0.631436 | 2.4:+9861852 | MS.gene31433:CDS |
| ACGTTAATGGATATGAATCA+GGG | 0.631473 | 2.4:+9861995 | MS.gene31433:CDS |
| ACAATAACAACAATTATGAG+AGG | 0.640620 | 2.4:+9861887 | MS.gene31433:CDS |
| GAGAAGCAGCAAGAAGCACA+AGG | 0.650203 | 2.4:+9862093 | MS.gene31433:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATAAAAGCTACAAAAA+AGG | + | chr2.4:9861754-9861773 | MS.gene31433:CDS | 20.0% |
| !!! | AAATCTGTTAATGTTGTTTT+TGG | - | chr2.4:9861673-9861692 | None:intergenic | 20.0% |
| ! | ACAATAACAACAATTATGAG+AGG | + | chr2.4:9861887-9861906 | MS.gene31433:CDS | 25.0% |
| AACAACAATTATGAGAGGAA+AGG | + | chr2.4:9861892-9861911 | MS.gene31433:CDS | 30.0% | |
| AACAATTACAACAGCTACAA+TGG | + | chr2.4:9861847-9861866 | MS.gene31433:CDS | 30.0% | |
| ACAAGAAAAAGAAAGAGACT+TGG | - | chr2.4:9861360-9861379 | None:intergenic | 30.0% | |
| ! | AACGTTAATGGATATGAATC+AGG | + | chr2.4:9861994-9862013 | MS.gene31433:CDS | 30.0% |
| ! | ACGTTAATGGATATGAATCA+GGG | + | chr2.4:9861995-9862014 | MS.gene31433:CDS | 30.0% |
| ! | AGTCTCTTTCTTTTTCTTGT+TGG | + | chr2.4:9861360-9861379 | MS.gene31433:CDS | 30.0% |
| ! | GAGAAGTATAACAACGTTAA+TGG | + | chr2.4:9861982-9862001 | MS.gene31433:CDS | 30.0% |
| ! | TCAAAATGAGTTTGAGACTA+TGG | + | chr2.4:9862062-9862081 | MS.gene31433:CDS | 30.0% |
| !! | GTTTTGTCTAGCTTGAATTT+GGG | - | chr2.4:9861401-9861420 | None:intergenic | 30.0% |
| !! | TGTTTTGTCTAGCTTGAATT+TGG | - | chr2.4:9861402-9861421 | None:intergenic | 30.0% |
| !! | TTTTGTCTAGCTTGAATTTG+GGG | - | chr2.4:9861400-9861419 | None:intergenic | 30.0% |
| !! | TTTTTAGTCGAAACAGGAAA+CGG | + | chr2.4:9861595-9861614 | MS.gene31433:CDS | 30.0% |
| AATGAGTGACACAAGATTTC+TGG | + | chr2.4:9861921-9861940 | MS.gene31433:CDS | 35.0% | |
| AATTATGAGAGGAAAGGAGA+AGG | + | chr2.4:9861898-9861917 | MS.gene31433:CDS | 35.0% | |
| CCTGTTTCGACTAAAAATTG+AGG | - | chr2.4:9861592-9861611 | None:intergenic | 35.0% | |
| TCGACTAAAAATTGAGGTTC+TGG | - | chr2.4:9861586-9861605 | None:intergenic | 35.0% | |
| TTACAACAGCTACAATGGAA+AGG | + | chr2.4:9861852-9861871 | MS.gene31433:CDS | 35.0% | |
| TTTCCTTGGTTGGAGAATAT+TGG | - | chr2.4:9861648-9861667 | None:intergenic | 35.0% | |
| ! | AGAGTAGTTGATACAATCTC+TGG | - | chr2.4:9861547-9861566 | None:intergenic | 35.0% |
| ! | TGTACACTTCATTGTTGTTG+CGG | - | chr2.4:9861798-9861817 | None:intergenic | 35.0% |
| !!! | CCTCAATTTTTAGTCGAAAC+AGG | + | chr2.4:9861589-9861608 | MS.gene31433:CDS | 35.0% |
| !!! | TGTTGTTTTTGGAGTTTCCT+TGG | - | chr2.4:9861662-9861681 | None:intergenic | 35.0% |
| AATGGATATGAATCAGGGAG+AGG | + | chr2.4:9862000-9862019 | MS.gene31433:CDS | 40.0% | |
| ATTGAGGGTCTTCAACATTG+TGG | - | chr2.4:9861459-9861478 | None:intergenic | 40.0% | |
| CTGGAGATTGAGGTAATTGA+GGG | - | chr2.4:9861474-9861493 | None:intergenic | 40.0% | |
| GTATCAACTACTCTACCTTC+AGG | + | chr2.4:9861553-9861572 | MS.gene31433:CDS | 40.0% | |
| TAGCCAATATTCTCCAACCA+AGG | + | chr2.4:9861642-9861661 | MS.gene31433:CDS | 40.0% | |
| TTGAGGGTCTTCAACATTGT+GGG | - | chr2.4:9861458-9861477 | None:intergenic | 40.0% | |
| ! | AAAAATTGAGGTTCTGGTGC+TGG | - | chr2.4:9861580-9861599 | None:intergenic | 40.0% |
| ! | GACACAAGATTTCTGGAGAA+TGG | + | chr2.4:9861928-9861947 | MS.gene31433:CDS | 40.0% |
| ! | TTGTTGCGGAAGTTTGTTTG+AGG | - | chr2.4:9861784-9861803 | None:intergenic | 40.0% |
| !! | AGAGGAAGCACTGAAAATGA+AGG | + | chr2.4:9862018-9862037 | MS.gene31433:CDS | 40.0% |
| !!! | GTTTTTGGAGTTTCCTTGGT+TGG | - | chr2.4:9861658-9861677 | None:intergenic | 40.0% |
| ATTACCTCAATCTCCAGCAC+CGG | + | chr2.4:9861477-9861496 | MS.gene31433:CDS | 45.0% | |
| GCTGGAGATTGAGGTAATTG+AGG | - | chr2.4:9861475-9861494 | None:intergenic | 45.0% | |
| GTCGAAACAGGAAACGGTTA+CGG | + | chr2.4:9861601-9861620 | MS.gene31433:CDS | 45.0% | |
| ! | TAGCTTGAATTTGGGGTGAG+AGG | - | chr2.4:9861393-9861412 | None:intergenic | 45.0% |
| AGGGTCTTCAACATTGTGGG+TGG | - | chr2.4:9861455-9861474 | None:intergenic | 50.0% | |
| GGAAACGGTTACGGTCTCTA+TGG | + | chr2.4:9861610-9861629 | MS.gene31433:CDS | 50.0% | |
| ! | GAGAAGCAGCAAGAAGCACA+AGG | + | chr2.4:9862093-9862112 | MS.gene31433:CDS | 50.0% |
| !! | TCTTGTGCTGGTGCTGATAC+CGG | - | chr2.4:9861511-9861530 | None:intergenic | 50.0% |
| ACAATCTCTGGTGCAGCTGC+AGG | - | chr2.4:9861535-9861554 | None:intergenic | 55.0% | |
| GCAGCTGCAGGTTCTTGTGC+TGG | - | chr2.4:9861523-9861542 | None:intergenic | 60.0% | |
| !! | GGTTCTGGTGCTGGTCCTGA+AGG | - | chr2.4:9861571-9861590 | None:intergenic | 60.0% |
| !! | GCTGATACCGGTGCTGGTGC+CGG | - | chr2.4:9861499-9861518 | None:intergenic | 65.0% |
| !! | GCTGGTGCTGATACCGGTGC+TGG | - | chr2.4:9861505-9861524 | None:intergenic | 65.0% |
| !! | GGTGCCGGTGCTGGAGATTG+AGG | - | chr2.4:9861484-9861503 | None:intergenic | 65.0% |
| !! | TCCAGCACCGGCACCAGCAC+CGG | + | chr2.4:9861489-9861508 | MS.gene31433:CDS | 70.0% |
| !! | ACCGGTGCTGGTGCCGGTGC+TGG | - | chr2.4:9861493-9861512 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 9861340 | 9862134 | 9861340 | ID=MS.gene31433 |
| chr2.4 | mRNA | 9861340 | 9862134 | 9861340 | ID=MS.gene31433.t1;Parent=MS.gene31433 |
| chr2.4 | exon | 9861340 | 9862134 | 9861340 | ID=MS.gene31433.t1.exon1;Parent=MS.gene31433.t1 |
| chr2.4 | CDS | 9861340 | 9862134 | 9861340 | ID=cds.MS.gene31433.t1;Parent=MS.gene31433.t1 |
| Gene Sequence |
| Protein sequence |
