Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22705.t1 | XP_013450610.1 | 92.8 | 626 | 44 | 1 | 1 | 626 | 1 | 625 | 3.70E-307 | 1063.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22705.t1 | Q9M358 | 50.5 | 659 | 267 | 12 | 6 | 626 | 4 | 641 | 5.3e-161 | 569.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22705.t1 | A0A072U659 | 92.8 | 626 | 44 | 1 | 1 | 626 | 1 | 625 | 2.7e-307 | 1063.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene22705 | 0.805398 | 1.36E-49 | -1.69E-46 |
| MS.gene04920 | MS.gene22705 | 0.818043 | 2.41E-52 | -1.69E-46 |
| MS.gene049283 | MS.gene22705 | 0.849865 | 2.46E-60 | -1.69E-46 |
| MS.gene049368 | MS.gene22705 | 0.811182 | 7.96E-51 | -1.69E-46 |
| MS.gene049452 | MS.gene22705 | 0.827185 | 1.80E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene22705 | 0.827574 | 1.45E-54 | -1.69E-46 |
| MS.gene049801 | MS.gene22705 | 0.804333 | 2.27E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene22705 | 0.868716 | 5.31E-66 | -1.69E-46 |
| MS.gene050105 | MS.gene22705 | 0.81666 | 4.93E-52 | -1.69E-46 |
| MS.gene050213 | MS.gene22705 | 0.830101 | 3.55E-55 | -1.69E-46 |
| MS.gene050414 | MS.gene22705 | 0.800263 | 1.56E-48 | -1.69E-46 |
| MS.gene050646 | MS.gene22705 | 0.809248 | 2.08E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene22705 | 0.909366 | 6.17E-82 | -1.69E-46 |
| MS.gene050737 | MS.gene22705 | 0.839148 | 1.88E-57 | -1.69E-46 |
| MS.gene050759 | MS.gene22705 | 0.813282 | 2.77E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene22705 | 0.851433 | 8.90E-61 | -1.69E-46 |
| MS.gene051066 | MS.gene22705 | 0.82167 | 3.57E-53 | -1.69E-46 |
| MS.gene051198 | MS.gene22705 | 0.819871 | 9.25E-53 | -1.69E-46 |
| MS.gene051209 | MS.gene22705 | 0.824975 | 6.03E-54 | -1.69E-46 |
| MS.gene051343 | MS.gene22705 | 0.809933 | 1.48E-50 | -1.69E-46 |
| MS.gene051368 | MS.gene22705 | 0.804763 | 1.85E-49 | -1.69E-46 |
| MS.gene051541 | MS.gene22705 | 0.8041 | 2.54E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene22705 | 0.802139 | 6.46E-49 | -1.69E-46 |
| MS.gene052118 | MS.gene22705 | 0.828752 | 7.55E-55 | -1.69E-46 |
| MS.gene052197 | MS.gene22705 | 0.807642 | 4.58E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene22705 | 0.815493 | 8.99E-52 | -1.69E-46 |
| MS.gene052342 | MS.gene22705 | 0.805702 | 1.18E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene22705 | 0.81429 | 1.66E-51 | -1.69E-46 |
| MS.gene052518 | MS.gene22705 | 0.81276 | 3.60E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene22705 | 0.825417 | 4.74E-54 | -1.69E-46 |
| MS.gene052675 | MS.gene22705 | 0.828169 | 1.04E-54 | -1.69E-46 |
| MS.gene052677 | MS.gene22705 | 0.828022 | 1.13E-54 | -1.69E-46 |
| MS.gene052775 | MS.gene22705 | 0.809186 | 2.14E-50 | -1.69E-46 |
| MS.gene052776 | MS.gene22705 | 0.811916 | 5.51E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene22705 | 0.82215 | 2.76E-53 | -1.69E-46 |
| MS.gene053726 | MS.gene22705 | 0.828299 | 9.71E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene22705 | 0.84713 | 1.41E-59 | -1.69E-46 |
| MS.gene05458 | MS.gene22705 | 0.801423 | 9.07E-49 | -1.69E-46 |
| MS.gene054641 | MS.gene22705 | 0.836089 | 1.15E-56 | -1.69E-46 |
| MS.gene054892 | MS.gene22705 | 0.826886 | 2.12E-54 | -1.69E-46 |
| MS.gene054893 | MS.gene22705 | 0.829331 | 5.47E-55 | -1.69E-46 |
| MS.gene055222 | MS.gene22705 | 0.807505 | 4.89E-50 | -1.69E-46 |
| MS.gene055327 | MS.gene22705 | 0.800224 | 1.59E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene22705 | 0.848005 | 8.07E-60 | -1.69E-46 |
| MS.gene055926 | MS.gene22705 | 0.825388 | 4.82E-54 | -1.69E-46 |
| MS.gene056045 | MS.gene22705 | 0.857441 | 1.63E-62 | -1.69E-46 |
| MS.gene056181 | MS.gene22705 | 0.832278 | 1.04E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene22705 | 0.808263 | 3.38E-50 | -1.69E-46 |
| MS.gene056480 | MS.gene22705 | 0.808398 | 3.16E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene22705 | 0.809195 | 2.13E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene22705 | 0.832871 | 7.38E-56 | -1.69E-46 |
| MS.gene056831 | MS.gene22705 | 0.869426 | 3.12E-66 | -1.69E-46 |
| MS.gene056834 | MS.gene22705 | 0.821904 | 3.15E-53 | -1.69E-46 |
| MS.gene056973 | MS.gene22705 | 0.848598 | 5.53E-60 | -1.69E-46 |
| MS.gene057034 | MS.gene22705 | 0.830835 | 2.35E-55 | -1.69E-46 |
| MS.gene057155 | MS.gene22705 | 0.82505 | 5.79E-54 | -1.69E-46 |
| MS.gene057208 | MS.gene22705 | 0.844664 | 6.57E-59 | -1.69E-46 |
| MS.gene057371 | MS.gene22705 | 0.808809 | 2.58E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene22705 | 0.80908 | 2.26E-50 | -1.69E-46 |
| MS.gene058223 | MS.gene22705 | -0.800397 | 1.47E-48 | -1.69E-46 |
| MS.gene058292 | MS.gene22705 | 0.822386 | 2.44E-53 | -1.69E-46 |
| MS.gene058429 | MS.gene22705 | 0.833061 | 6.62E-56 | -1.69E-46 |
| MS.gene058781 | MS.gene22705 | 0.815195 | 1.05E-51 | -1.69E-46 |
| MS.gene059439 | MS.gene22705 | 0.805056 | 1.60E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene22705 | 0.851675 | 7.60E-61 | -1.69E-46 |
| MS.gene060435 | MS.gene22705 | 0.825702 | 4.06E-54 | -1.69E-46 |
| MS.gene060527 | MS.gene22705 | 0.819297 | 1.25E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene22705 | 0.818223 | 2.19E-52 | -1.69E-46 |
| MS.gene060637 | MS.gene22705 | 0.8094 | 1.93E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene22705 | 0.819967 | 8.79E-53 | -1.69E-46 |
| MS.gene060850 | MS.gene22705 | 0.838311 | 3.10E-57 | -1.69E-46 |
| MS.gene060851 | MS.gene22705 | 0.835076 | 2.07E-56 | -1.69E-46 |
| MS.gene060852 | MS.gene22705 | 0.833492 | 5.17E-56 | -1.69E-46 |
| MS.gene060932 | MS.gene22705 | 0.855022 | 8.33E-62 | -1.69E-46 |
| MS.gene060933 | MS.gene22705 | 0.840058 | 1.09E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene22705 | 0.840574 | 8.01E-58 | -1.69E-46 |
| MS.gene060937 | MS.gene22705 | 0.854777 | 9.82E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene22705 | 0.82066 | 6.10E-53 | -1.69E-46 |
| MS.gene06121 | MS.gene22705 | 0.854105 | 1.54E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22705.t1 | MTR_7g117420 | 96.805 | 626 | 19 | 1 | 1 | 626 | 1 | 625 | 0.0 | 1232 |
| MS.gene22705.t1 | MTR_7g117420 | 96.805 | 626 | 19 | 1 | 1 | 626 | 1 | 625 | 0.0 | 1232 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22705.t1 | AT3G61800 | 51.529 | 654 | 257 | 12 | 13 | 626 | 8 | 641 | 0.0 | 610 |
| MS.gene22705.t1 | AT3G61800 | 51.529 | 654 | 257 | 12 | 13 | 626 | 8 | 641 | 0.0 | 610 |
Find 123 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTATCACTACTCATATTT+TGG | 0.084349 | 7.4:-953602 | None:intergenic |
| TGAAGAGTTCGTCAATTATT+TGG | 0.177904 | 7.4:-952717 | None:intergenic |
| ACTTGCTTCTCAAACCTTAA+TGG | 0.182401 | 7.4:+952216 | MS.gene22705:CDS |
| GCTTGAGGACTTTCGCTCTT+TGG | 0.264270 | 7.4:+953188 | MS.gene22705:CDS |
| TCAAGAATGGGTTTCTGTTC+TGG | 0.266520 | 7.4:+953341 | MS.gene22705:CDS |
| GACTCTCATTGTTGAGAGTT+TGG | 0.271333 | 7.4:+952759 | MS.gene22705:CDS |
| ACTTCAAGATCAGCCGCTTT+TGG | 0.271514 | 7.4:+954239 | MS.gene22705:CDS |
| ATGAAAATTTGTCCATTTCA+TGG | 0.272246 | 7.4:+953969 | MS.gene22705:CDS |
| ACGCTTCATGAGATCCATTA+AGG | 0.280350 | 7.4:-952230 | None:intergenic |
| TAACTGATTTAACACGGTTT+TGG | 0.295994 | 7.4:-953425 | None:intergenic |
| GGGGTTCTCACTTGGATACT+TGG | 0.305283 | 7.4:+953745 | MS.gene22705:CDS |
| GTGCAAAACTTGCTAAAATT+CGG | 0.324391 | 7.4:+954174 | MS.gene22705:CDS |
| TGTCCTTGAGTGTTGGGTTT+CGG | 0.338318 | 7.4:+952791 | MS.gene22705:CDS |
| GAAAAGAGAAATTGATAAAC+AGG | 0.344103 | 7.4:+954142 | MS.gene22705:CDS |
| GCGGGAGCTATACAAACTTT+TGG | 0.351953 | 7.4:+953296 | MS.gene22705:CDS |
| ATTCAGAGATTCTACTTTGA+AGG | 0.352140 | 7.4:+953389 | MS.gene22705:CDS |
| TCCACATTAGCTTGTATGTT+AGG | 0.356001 | 7.4:-952970 | None:intergenic |
| GATGCAACAGACGGAGGGGC+AGG | 0.359769 | 7.4:-952829 | None:intergenic |
| GGTGGTTCGTTACTCCGATT+TGG | 0.367502 | 7.4:+952186 | MS.gene22705:CDS |
| GAGAAGTGGAATGTTTCGTT+TGG | 0.373506 | 7.4:+952883 | MS.gene22705:CDS |
| TCATCATCTCGAGGAATAAT+AGG | 0.380344 | 7.4:-953993 | None:intergenic |
| CAATGGCCTTTGTACGCAAA+AGG | 0.381816 | 7.4:-952852 | None:intergenic |
| AGTTAATGTCCTTGAGTGTT+GGG | 0.381948 | 7.4:+952785 | MS.gene22705:CDS |
| TGCAAAACTTGCTAAAATTC+GGG | 0.384462 | 7.4:+954175 | MS.gene22705:CDS |
| AGAAGTGGAATGTTTCGTTT+GGG | 0.387150 | 7.4:+952884 | MS.gene22705:CDS |
| AATTTCTGAATTGAGTGTTC+CGG | 0.389243 | 7.4:+953863 | MS.gene22705:CDS |
| GGGTTCTCACTTGGATACTT+GGG | 0.398806 | 7.4:+953746 | MS.gene22705:CDS |
| CATTACAGACAGCTTAGATT+AGG | 0.400928 | 7.4:+952910 | MS.gene22705:CDS |
| GATTGGATCTTGAAAGTCAT+TGG | 0.404975 | 7.4:+953802 | MS.gene22705:CDS |
| CCATCTTACCACAGGAGCTT+TGG | 0.407101 | 7.4:-953724 | None:intergenic |
| GCCGTGCTCCTTTGAGAAAA+GGG | 0.408275 | 7.4:+953925 | MS.gene22705:CDS |
| ACAGACGGAGGGGCAGGGAG+CGG | 0.413891 | 7.4:-952823 | None:intergenic |
| TGCCGTGCTCCTTTGAGAAA+AGG | 0.415320 | 7.4:+953924 | MS.gene22705:CDS |
| CTTGGTTTCCATTCAAGAAT+GGG | 0.416261 | 7.4:+953329 | MS.gene22705:CDS |
| AAGCTAATGTGGAGAGGATT+CGG | 0.418840 | 7.4:+952980 | MS.gene22705:CDS |
| AACACTGACAGCCTACTTCA+TGG | 0.429399 | 7.4:+953657 | MS.gene22705:CDS |
| CCAAAGCTCCTGTGGTAAGA+TGG | 0.429788 | 7.4:+953724 | MS.gene22705:CDS |
| TAAACTCATCAAAACTTGAC+GGG | 0.431421 | 7.4:+953481 | MS.gene22705:CDS |
| ACTTGGTTTCCATTCAAGAA+TGG | 0.435377 | 7.4:+953328 | MS.gene22705:CDS |
| TATGGCCAACCAGCGGGGAT+TGG | 0.436674 | 7.4:+953785 | MS.gene22705:CDS |
| ATTGGATCTTGAAAGTCATT+GGG | 0.440525 | 7.4:+953803 | MS.gene22705:CDS |
| TGGGAAGTTGATGCCACGTC+AGG | 0.445034 | 7.4:-953582 | None:intergenic |
| ATGGAAAAGGAGCGAAGGTT+AGG | 0.446317 | 7.4:+952092 | MS.gene22705:CDS |
| CTAAACTCATCAAAACTTGA+CGG | 0.453308 | 7.4:+953480 | MS.gene22705:CDS |
| CACACCAGATGGGGTTTCAA+TGG | 0.456189 | 7.4:-953538 | None:intergenic |
| GGAATAATAGGTCCATGAAA+TGG | 0.457015 | 7.4:-953981 | None:intergenic |
| GAAGAAGGCGAAAGAGAAGA+AGG | 0.458533 | 7.4:+952067 | MS.gene22705:CDS |
| CAGTTAATGTCCTTGAGTGT+TGG | 0.460515 | 7.4:+952784 | MS.gene22705:CDS |
| ATGCAACAGACGGAGGGGCA+GGG | 0.465331 | 7.4:-952828 | None:intergenic |
| CAAAGCTCCTGTGGTAAGAT+GGG | 0.471408 | 7.4:+953725 | MS.gene22705:CDS |
| TCAAAGGAGCACGGCATGGT+TGG | 0.482748 | 7.4:-953917 | None:intergenic |
| AAAGGGATGCAACAGACGGA+GGG | 0.483326 | 7.4:-952834 | None:intergenic |
| AATTCAGAAATTATATCTGA+TGG | 0.490481 | 7.4:-953852 | None:intergenic |
| ACACTGACAGCCTACTTCAT+GGG | 0.496310 | 7.4:+953658 | MS.gene22705:CDS |
| AGAGAAGAAGGGAATGGAAA+AGG | 0.500826 | 7.4:+952079 | MS.gene22705:CDS |
| GGCGAAAGAGAAGAAGGGAA+TGG | 0.503524 | 7.4:+952073 | MS.gene22705:CDS |
| AACAGAAACCCATTCTTGAA+TGG | 0.505019 | 7.4:-953337 | None:intergenic |
| AGCAAGTCGGAGCTCCAAAT+CGG | 0.507757 | 7.4:-952200 | None:intergenic |
| AATGGCCTTTGTACGCAAAA+GGG | 0.509485 | 7.4:-952851 | None:intergenic |
| ATTATTCCTCGAGATGATGA+AGG | 0.512319 | 7.4:+953996 | MS.gene22705:CDS |
| AGAGGATTCGGCAAGAGAGA+AGG | 0.518182 | 7.4:+952992 | MS.gene22705:CDS |
| GGTAAGATGGGGTTCTCACT+TGG | 0.521435 | 7.4:+953737 | MS.gene22705:CDS |
| GTCAAAAGTTTACTCCTCAG+AGG | 0.527239 | 7.4:-953702 | None:intergenic |
| CGTCAATTATTTGGAGTGCA+AGG | 0.528658 | 7.4:-952708 | None:intergenic |
| GTCGTGAAGCATTGAATGAA+AGG | 0.529243 | 7.4:+953226 | MS.gene22705:CDS |
| TCTACGATGGAGGAGATTGA+TGG | 0.530605 | 7.4:+953102 | MS.gene22705:CDS |
| TATTATCAGGCACACCAGAT+GGG | 0.532703 | 7.4:-953548 | None:intergenic |
| AGGAGGCGGTGATCGACATC+CGG | 0.540708 | 7.4:-952148 | None:intergenic |
| CTCATCATCTTCTCCAAAAG+CGG | 0.546653 | 7.4:-954252 | None:intergenic |
| GAGGATTCGGCAAGAGAGAA+GGG | 0.547375 | 7.4:+952993 | MS.gene22705:CDS |
| TTAACATTCATGTCTTCTGA+AGG | 0.550553 | 7.4:-954038 | None:intergenic |
| TTATTATCAGGCACACCAGA+TGG | 0.551120 | 7.4:-953549 | None:intergenic |
| AAGAAGGCGAAAGAGAAGAA+GGG | 0.554761 | 7.4:+952068 | MS.gene22705:CDS |
| TCGTGAAGCATTGAATGAAA+GGG | 0.558449 | 7.4:+953227 | MS.gene22705:CDS |
| AGAGAAGGGAGAGGGAGATG+AGG | 0.558791 | 7.4:+953007 | MS.gene22705:CDS |
| AAAAGGGATGCAACAGACGG+AGG | 0.562638 | 7.4:-952835 | None:intergenic |
| GGTTCTCACTTGGATACTTG+GGG | 0.562903 | 7.4:+953747 | MS.gene22705:CDS |
| CTTAGACGATGAAGAGCTTG+AGG | 0.566022 | 7.4:+953173 | MS.gene22705:CDS |
| TCAAAAGTTTACTCCTCAGA+GGG | 0.569727 | 7.4:-953701 | None:intergenic |
| CACTGACAGCCTACTTCATG+GGG | 0.569874 | 7.4:+953659 | MS.gene22705:CDS |
| GTATCCATTGAAACCCCATC+TGG | 0.569924 | 7.4:+953534 | MS.gene22705:CDS |
| GGCAACAAATTCCACCGCAC+CGG | 0.571423 | 7.4:+952129 | MS.gene22705:CDS |
| GTGATCGACATCCGGTGCGG+TGG | 0.573761 | 7.4:-952140 | None:intergenic |
| ATCTTGAAAGTCATTGGGGT+AGG | 0.574477 | 7.4:+953808 | MS.gene22705:CDS |
| TGAGCTTTAGTGTATTCTTG+AGG | 0.574810 | 7.4:-952942 | None:intergenic |
| TTCGGCAAGAGAGAAGGGAG+AGG | 0.578002 | 7.4:+952998 | MS.gene22705:CDS |
| TTTCAAGATCCAATCCCCGC+TGG | 0.583117 | 7.4:-953794 | None:intergenic |
| AAGATCCAATCCCCGCTGGT+TGG | 0.583660 | 7.4:-953790 | None:intergenic |
| GGATACTTGGGGTTCAAACA+AGG | 0.586225 | 7.4:+953758 | MS.gene22705:CDS |
| TCGCCGAAACCCAACACTCA+AGG | 0.592782 | 7.4:-952794 | None:intergenic |
| CGCAAAAGGGATGCAACAGA+CGG | 0.595656 | 7.4:-952838 | None:intergenic |
| AGGGAATGGAAAAGGAGCGA+AGG | 0.595700 | 7.4:+952087 | MS.gene22705:CDS |
| TCCTAACATACAAGCTAATG+TGG | 0.595760 | 7.4:+952969 | MS.gene22705:CDS |
| TTATGAAAGCAGTGATAACA+AGG | 0.597508 | 7.4:+953257 | MS.gene22705:CDS |
| TCTTGAAAGTCATTGGGGTA+GGG | 0.598282 | 7.4:+953809 | MS.gene22705:CDS |
| GATTGGATAGGTATGGAAGA+AGG | 0.598556 | 7.4:+952052 | None:intergenic |
| ATTATCAGGCACACCAGATG+GGG | 0.602798 | 7.4:-953547 | None:intergenic |
| CATGAAGCGTGATCACTCCC+AGG | 0.603510 | 7.4:+952243 | MS.gene22705:CDS |
| CCTCCTCAAAGCAATCAAAA+CGG | 0.603835 | 7.4:+952165 | MS.gene22705:CDS |
| TTTCTCAAAGGAGCACGGCA+TGG | 0.606475 | 7.4:-953921 | None:intergenic |
| TGTTCGTGAAACAGACAAGA+AGG | 0.608437 | 7.4:+954112 | MS.gene22705:CDS |
| CCGTGCTCCTTTGAGAAAAG+GGG | 0.616217 | 7.4:+953926 | MS.gene22705:CDS |
| AGCTTCCCTTCATCATCTCG+AGG | 0.617559 | 7.4:-954002 | None:intergenic |
| TTATTCCTCGAGATGATGAA+GGG | 0.619534 | 7.4:+953997 | MS.gene22705:CDS |
| GAAGTGGAATGTTTCGTTTG+GGG | 0.626587 | 7.4:+952885 | MS.gene22705:CDS |
| TGAGAACCCCATCTTACCAC+AGG | 0.626927 | 7.4:-953732 | None:intergenic |
| AGAGATACTGTCTACGATGG+AGG | 0.627724 | 7.4:+953092 | MS.gene22705:CDS |
| TCGGCAAGAGAGAAGGGAGA+GGG | 0.636680 | 7.4:+952999 | MS.gene22705:CDS |
| GGGAGAGATACTGTCTACGA+TGG | 0.642323 | 7.4:+953089 | MS.gene22705:CDS |
| CGTGCTCCTTTGAGAAAAGG+GGG | 0.646992 | 7.4:+953927 | MS.gene22705:CDS |
| CTACGATGGAGGAGATTGAT+GGG | 0.647781 | 7.4:+953103 | MS.gene22705:CDS |
| TTAAGGTTTGAGAAGCAAGT+CGG | 0.651226 | 7.4:-952213 | None:intergenic |
| AAAGCTCCTGTGGTAAGATG+GGG | 0.652782 | 7.4:+953726 | MS.gene22705:CDS |
| AAGGGATGCAACAGACGGAG+GGG | 0.656411 | 7.4:-952833 | None:intergenic |
| AATCAGAGTCAAACCCTCTG+AGG | 0.661720 | 7.4:+953688 | MS.gene22705:CDS |
| AATATGAGTAGTGATAAACT+TGG | 0.665201 | 7.4:+953606 | MS.gene22705:CDS |
| ACATACAAGCTAATGTGGAG+AGG | 0.665961 | 7.4:+952974 | MS.gene22705:CDS |
| TTGGATCTTGAAAGTCATTG+GGG | 0.668632 | 7.4:+953804 | MS.gene22705:CDS |
| AAACTCATCAAAACTTGACG+GGG | 0.674187 | 7.4:+953482 | MS.gene22705:CDS |
| CCTCAAAGCAATCAAAACGG+TGG | 0.690187 | 7.4:+952168 | MS.gene22705:CDS |
| GCGGTGATCGACATCCGGTG+CGG | 0.720821 | 7.4:-952143 | None:intergenic |
| TCGTGAAACAGACAAGAAGG+TGG | 0.730580 | 7.4:+954115 | MS.gene22705:CDS |
| ACTGACAGCCTACTTCATGG+GGG | 0.785079 | 7.4:+953660 | MS.gene22705:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAACTGATTTAACA+CGG | - | chr7.4:953434-953453 | None:intergenic | 15.0% |
| !! | AAAACTATATCAAAGGTAAT+AGG | + | chr7.4:952548-952567 | MS.gene22705:intron | 20.0% |
| !! | AATTCAGAAATTATATCTGA+TGG | - | chr7.4:953855-953874 | None:intergenic | 20.0% |
| !! | AGGAATTAAATAAAATACCT+GGG | - | chr7.4:952263-952282 | None:intergenic | 20.0% |
| !! | AGTTGATTATATCTACAATA+AGG | - | chr7.4:952601-952620 | None:intergenic | 20.0% |
| !!! | AGAGAAATTTTCTTCAATAA+AGG | + | chr7.4:953068-953087 | MS.gene22705:CDS | 20.0% |
| !!! | ATCAAAAAATTGCTTTTGTT+TGG | + | chr7.4:952407-952426 | MS.gene22705:intron | 20.0% |
| !!! | GAGAAATTTTCTTCAATAAA+GGG | + | chr7.4:953069-953088 | MS.gene22705:CDS | 20.0% |
| !!! | TAACAAAAGCAATTTTATGA+TGG | - | chr7.4:952438-952457 | None:intergenic | 20.0% |
| !!! | TTTATCAATTTCTCTTTTCT+TGG | - | chr7.4:954141-954160 | None:intergenic | 20.0% |
| !!! | TTTATCACTACTCATATTTT+GGG | - | chr7.4:953604-953623 | None:intergenic | 20.0% |
| ! | AATATGAGTAGTGATAAACT+TGG | + | chr7.4:953606-953625 | MS.gene22705:CDS | 25.0% |
| ! | ATCAGTTAAAAAAAGATGTG+AGG | + | chr7.4:953440-953459 | MS.gene22705:CDS | 25.0% |
| ! | ATGAAAATTTGTCCATTTCA+TGG | + | chr7.4:953969-953988 | MS.gene22705:CDS | 25.0% |
| ! | GAAAAGAGAAATTGATAAAC+AGG | + | chr7.4:954142-954161 | MS.gene22705:CDS | 25.0% |
| ! | GAATCAATTTAGACTATCTA+AGG | + | chr7.4:952525-952544 | MS.gene22705:intron | 25.0% |
| ! | GAGGAATTAAATAAAATACC+TGG | - | chr7.4:952264-952283 | None:intergenic | 25.0% |
| ! | TCTAAGGAAAACTATATCAA+AGG | + | chr7.4:952541-952560 | MS.gene22705:intron | 25.0% |
| ! | TTTGATTCTTATAATTGCCA+CGG | + | chr7.4:952313-952332 | MS.gene22705:intron | 25.0% |
| !! | ATGTTGAATTCTTTGGATTT+TGG | + | chr7.4:952339-952358 | MS.gene22705:intron | 25.0% |
| !! | GTTTATCACTACTCATATTT+TGG | - | chr7.4:953605-953624 | None:intergenic | 25.0% |
| !!! | GGATGTTTGTTTTTATTATC+AGG | - | chr7.4:953564-953583 | None:intergenic | 25.0% |
| !!! | TCAATTTGCTTTTCTTCATA+AGG | - | chr7.4:953894-953913 | None:intergenic | 25.0% |
| AATTTCTGAATTGAGTGTTC+CGG | + | chr7.4:953863-953882 | MS.gene22705:CDS | 30.0% | |
| AGTTAAAAAAAGATGTGAGG+AGG | + | chr7.4:953443-953462 | MS.gene22705:CDS | 30.0% | |
| ATATCAATCCATGTCAACAA+GGG | - | chr7.4:952671-952690 | None:intergenic | 30.0% | |
| ATCATGAAACTATACAAGAG+AGG | + | chr7.4:952380-952399 | MS.gene22705:intron | 30.0% | |
| ATTCAGAGATTCTACTTTGA+AGG | + | chr7.4:953389-953408 | MS.gene22705:CDS | 30.0% | |
| ATTGGATCTTGAAAGTCATT+GGG | + | chr7.4:953803-953822 | MS.gene22705:CDS | 30.0% | |
| CTAAAAGCGATTTCAACAAT+AGG | + | chr7.4:952458-952477 | MS.gene22705:intron | 30.0% | |
| CTAAACTCATCAAAACTTGA+CGG | + | chr7.4:953480-953499 | MS.gene22705:CDS | 30.0% | |
| TAAACTCATCAAAACTTGAC+GGG | + | chr7.4:953481-953500 | MS.gene22705:CDS | 30.0% | |
| TAGGATGAGAGAATAAATGA+TGG | + | chr7.4:952567-952586 | MS.gene22705:intron | 30.0% | |
| TCATGAAACTATACAAGAGA+GGG | + | chr7.4:952381-952400 | MS.gene22705:intron | 30.0% | |
| TGAAGAGTTCGTCAATTATT+TGG | - | chr7.4:952720-952739 | None:intergenic | 30.0% | |
| TTAACATTCATGTCTTCTGA+AGG | - | chr7.4:954041-954060 | None:intergenic | 30.0% | |
| TTATGAAAGCAGTGATAACA+AGG | + | chr7.4:953257-953276 | MS.gene22705:CDS | 30.0% | |
| ! | AACACAATGATGCAGTTTTA+CGG | + | chr7.4:954198-954217 | MS.gene22705:CDS | 30.0% |
| ! | AGACATTTTGCATTCAAAAC+AGG | + | chr7.4:953131-953150 | MS.gene22705:CDS | 30.0% |
| ! | TACAAAGGCCATTGAATTTT+TGG | + | chr7.4:952861-952880 | MS.gene22705:CDS | 30.0% |
| !! | ATTGATATGTGTTTCAGGTT+AGG | + | chr7.4:952683-952702 | MS.gene22705:intron | 30.0% |
| !! | GGTTAGGTTTTTGATTGAAA+AGG | + | chr7.4:952108-952127 | MS.gene22705:CDS | 30.0% |
| !! | GTGCAAAACTTGCTAAAATT+CGG | + | chr7.4:954174-954193 | MS.gene22705:CDS | 30.0% |
| !! | TAACTGATTTAACACGGTTT+TGG | - | chr7.4:953428-953447 | None:intergenic | 30.0% |
| !! | TGCAAAACTTGCTAAAATTC+GGG | + | chr7.4:954175-954194 | MS.gene22705:CDS | 30.0% |
| AAACTCATCAAAACTTGACG+GGG | + | chr7.4:953482-953501 | MS.gene22705:CDS | 35.0% | |
| AACAGAAACCCATTCTTGAA+TGG | - | chr7.4:953340-953359 | None:intergenic | 35.0% | |
| ACTTGCTTCTCAAACCTTAA+TGG | + | chr7.4:952216-952235 | MS.gene22705:CDS | 35.0% | |
| ACTTGGTTTCCATTCAAGAA+TGG | + | chr7.4:953328-953347 | MS.gene22705:CDS | 35.0% | |
| AGAAGTGGAATGTTTCGTTT+GGG | + | chr7.4:952884-952903 | MS.gene22705:CDS | 35.0% | |
| AGTTAATGTCCTTGAGTGTT+GGG | + | chr7.4:952785-952804 | MS.gene22705:CDS | 35.0% | |
| ATTATTCCTCGAGATGATGA+AGG | + | chr7.4:953996-954015 | MS.gene22705:CDS | 35.0% | |
| CATATCAATCCATGTCAACA+AGG | - | chr7.4:952672-952691 | None:intergenic | 35.0% | |
| CATTACAGACAGCTTAGATT+AGG | + | chr7.4:952910-952929 | MS.gene22705:CDS | 35.0% | |
| CCACTTCTCCAAAAATTCAA+TGG | - | chr7.4:952872-952891 | None:intergenic | 35.0% | |
| CTTGGTTTCCATTCAAGAAT+GGG | + | chr7.4:953329-953348 | MS.gene22705:CDS | 35.0% | |
| GATTGGATCTTGAAAGTCAT+TGG | + | chr7.4:953802-953821 | MS.gene22705:CDS | 35.0% | |
| GGAATAATAGGTCCATGAAA+TGG | - | chr7.4:953984-954003 | None:intergenic | 35.0% | |
| TAAAAACAAACATCCTGACG+TGG | + | chr7.4:953569-953588 | MS.gene22705:CDS | 35.0% | |
| TATCAATCCATGTCAACAAG+GGG | - | chr7.4:952670-952689 | None:intergenic | 35.0% | |
| TCAAAAGTTTACTCCTCAGA+GGG | - | chr7.4:953704-953723 | None:intergenic | 35.0% | |
| TCATCATCTCGAGGAATAAT+AGG | - | chr7.4:953996-954015 | None:intergenic | 35.0% | |
| TCCTAACATACAAGCTAATG+TGG | + | chr7.4:952969-952988 | MS.gene22705:CDS | 35.0% | |
| TTAAGGTTTGAGAAGCAAGT+CGG | - | chr7.4:952216-952235 | None:intergenic | 35.0% | |
| TTATTCCTCGAGATGATGAA+GGG | + | chr7.4:953997-954016 | MS.gene22705:CDS | 35.0% | |
| TTGGATCTTGAAAGTCATTG+GGG | + | chr7.4:953804-953823 | MS.gene22705:CDS | 35.0% | |
| ! | ACACAATGATGCAGTTTTAC+GGG | + | chr7.4:954199-954218 | MS.gene22705:CDS | 35.0% |
| ! | AGGTAGTTTTTGATGCATTG+CGG | + | chr7.4:953277-953296 | MS.gene22705:CDS | 35.0% |
| ! | CATGGATTGATATGTGTTTC+AGG | + | chr7.4:952678-952697 | MS.gene22705:intron | 35.0% |
| ! | GGGTTCAAACAAGGTTTTTA+TGG | + | chr7.4:953767-953786 | MS.gene22705:CDS | 35.0% |
| ! | TCATGCGATCAAAGCTTTTT+AGG | + | chr7.4:952737-952756 | MS.gene22705:CDS | 35.0% |
| ! | TGAGCTTTAGTGTATTCTTG+AGG | - | chr7.4:952945-952964 | None:intergenic | 35.0% |
| !! | CCATTGAATTTTTGGAGAAG+TGG | + | chr7.4:952869-952888 | MS.gene22705:CDS | 35.0% |
| !! | TCAACAAGGGGGTTTTATAT+TGG | - | chr7.4:952658-952677 | None:intergenic | 35.0% |
| !! | TCCACATTAGCTTGTATGTT+AGG | - | chr7.4:952973-952992 | None:intergenic | 35.0% |
| !! | TCGTGAAGCATTGAATGAAA+GGG | + | chr7.4:953227-953246 | MS.gene22705:CDS | 35.0% |
| !!! | CGTTACTTTCTTTTTCAGCA+TGG | - | chr7.4:954312-954331 | None:intergenic | 35.0% |
| !!! | TTTTCTTCATAAGGCATTGC+CGG | - | chr7.4:953885-953904 | None:intergenic | 35.0% |
| AAAAAAAGATGTGAGGAGGC+AGG | + | chr7.4:953447-953466 | MS.gene22705:CDS | 40.0% | |
| AAAGAATTCAACATCGACCG+TGG | - | chr7.4:952333-952352 | None:intergenic | 40.0% | |
| AAGAAGGCGAAAGAGAAGAA+GGG | + | chr7.4:952068-952087 | MS.gene22705:CDS | 40.0% | |
| AAGCTAATGTGGAGAGGATT+CGG | + | chr7.4:952980-952999 | MS.gene22705:CDS | 40.0% | |
| AATGGCCTTTGTACGCAAAA+GGG | - | chr7.4:952854-952873 | None:intergenic | 40.0% | |
| ACATACAAGCTAATGTGGAG+AGG | + | chr7.4:952974-952993 | MS.gene22705:CDS | 40.0% | |
| ACGCTTCATGAGATCCATTA+AGG | - | chr7.4:952233-952252 | None:intergenic | 40.0% | |
| ACGGTCGATGTTGAATTCTT+TGG | + | chr7.4:952332-952351 | MS.gene22705:intron | 40.0% | |
| AGAGAAGAAGGGAATGGAAA+AGG | + | chr7.4:952079-952098 | MS.gene22705:CDS | 40.0% | |
| ATAAAACCCCCTTGTTGACA+TGG | + | chr7.4:952660-952679 | MS.gene22705:intron | 40.0% | |
| ATCAATCCATGTCAACAAGG+GGG | - | chr7.4:952669-952688 | None:intergenic | 40.0% | |
| ATCTTGAAAGTCATTGGGGT+AGG | + | chr7.4:953808-953827 | MS.gene22705:CDS | 40.0% | |
| ATTCCTCTCGCTCTCTAATT+AGG | + | chr7.4:952277-952296 | MS.gene22705:intron | 40.0% | |
| CAGTTAATGTCCTTGAGTGT+TGG | + | chr7.4:952784-952803 | MS.gene22705:CDS | 40.0% | |
| CCTCCTCAAAGCAATCAAAA+CGG | + | chr7.4:952165-952184 | MS.gene22705:CDS | 40.0% | |
| CTCATCATCTTCTCCAAAAG+CGG | - | chr7.4:954255-954274 | None:intergenic | 40.0% | |
| GAAGTGGAATGTTTCGTTTG+GGG | + | chr7.4:952885-952904 | MS.gene22705:CDS | 40.0% | |
| GACTCTCATTGTTGAGAGTT+TGG | + | chr7.4:952759-952778 | MS.gene22705:CDS | 40.0% | |
| GAGAAGTGGAATGTTTCGTT+TGG | + | chr7.4:952883-952902 | MS.gene22705:CDS | 40.0% | |
| GTCAAAAGTTTACTCCTCAG+AGG | - | chr7.4:953705-953724 | None:intergenic | 40.0% | |
| TATTATCAGGCACACCAGAT+GGG | - | chr7.4:953551-953570 | None:intergenic | 40.0% | |
| TCTTGAAAGTCATTGGGGTA+GGG | + | chr7.4:953809-953828 | MS.gene22705:CDS | 40.0% | |
| TGTTCGTGAAACAGACAAGA+AGG | + | chr7.4:954112-954131 | MS.gene22705:CDS | 40.0% | |
| TTATTATCAGGCACACCAGA+TGG | - | chr7.4:953552-953571 | None:intergenic | 40.0% | |
| TTCCTCTCGCTCTCTAATTA+GGG | + | chr7.4:952278-952297 | MS.gene22705:intron | 40.0% | |
| ! | ATTGATTTCCCCCATGAAGT+AGG | - | chr7.4:953671-953690 | None:intergenic | 40.0% |
| ! | CGTCAATTATTTGGAGTGCA+AGG | - | chr7.4:952711-952730 | None:intergenic | 40.0% |
| ! | GGTAGTTTTTGATGCATTGC+GGG | + | chr7.4:953278-953297 | MS.gene22705:CDS | 40.0% |
| ! | TCAAGAATGGGTTTCTGTTC+TGG | + | chr7.4:953341-953360 | MS.gene22705:CDS | 40.0% |
| ! | TGACGGGGAAGAAGATTTTT+GGG | + | chr7.4:953497-953516 | MS.gene22705:CDS | 40.0% |
| ! | TTGACGGGGAAGAAGATTTT+TGG | + | chr7.4:953496-953515 | MS.gene22705:CDS | 40.0% |
| !! | AAGAAGATTTTTGGGAGGAG+GGG | + | chr7.4:953505-953524 | MS.gene22705:CDS | 40.0% |
| !! | ACTTTTGGTGACAAAGCACT+TGG | + | chr7.4:953311-953330 | MS.gene22705:CDS | 40.0% |
| !! | AGGGGGTTTTATATTGGACA+TGG | - | chr7.4:952652-952671 | None:intergenic | 40.0% |
| !! | GAAGAAGATTTTTGGGAGGA+GGG | + | chr7.4:953504-953523 | MS.gene22705:CDS | 40.0% |
| !! | GTCGTGAAGCATTGAATGAA+AGG | + | chr7.4:953226-953245 | MS.gene22705:CDS | 40.0% |
| !!! | CTCAGAAGCTTTTGAGTTCA+CGG | + | chr7.4:954348-954367 | MS.gene22705:CDS | 40.0% |
| !!! | TCAGAAGCTTTTGAGTTCAC+GGG | + | chr7.4:954349-954368 | MS.gene22705:CDS | 40.0% |
| !!! | TTTTGATTGCTTTGAGGAGG+CGG | - | chr7.4:952165-952184 | None:intergenic | 40.0% |
| AAAGCTCCTGTGGTAAGATG+GGG | + | chr7.4:953726-953745 | MS.gene22705:CDS | 45.0% | |
| AACACTGACAGCCTACTTCA+TGG | + | chr7.4:953657-953676 | MS.gene22705:CDS | 45.0% | |
| AACCCTAATTAGAGAGCGAG+AGG | - | chr7.4:952283-952302 | None:intergenic | 45.0% | |
| AATCAGAGTCAAACCCTCTG+AGG | + | chr7.4:953688-953707 | MS.gene22705:CDS | 45.0% | |
| ACACTGACAGCCTACTTCAT+GGG | + | chr7.4:953658-953677 | MS.gene22705:CDS | 45.0% | |
| AGAGATACTGTCTACGATGG+AGG | + | chr7.4:953092-953111 | MS.gene22705:CDS | 45.0% | |
| ATGGAAAAGGAGCGAAGGTT+AGG | + | chr7.4:952092-952111 | MS.gene22705:CDS | 45.0% | |
| ATTATCAGGCACACCAGATG+GGG | - | chr7.4:953550-953569 | None:intergenic | 45.0% | |
| CAAAGCTCCTGTGGTAAGAT+GGG | + | chr7.4:953725-953744 | MS.gene22705:CDS | 45.0% | |
| CAATGGCCTTTGTACGCAAA+AGG | - | chr7.4:952855-952874 | None:intergenic | 45.0% | |
| CCTCAAAGCAATCAAAACGG+TGG | + | chr7.4:952168-952187 | MS.gene22705:CDS | 45.0% | |
| CTACGATGGAGGAGATTGAT+GGG | + | chr7.4:953103-953122 | MS.gene22705:CDS | 45.0% | |
| CTTAGACGATGAAGAGCTTG+AGG | + | chr7.4:953173-953192 | MS.gene22705:CDS | 45.0% | |
| GAAGAAGGCGAAAGAGAAGA+AGG | + | chr7.4:952067-952086 | MS.gene22705:CDS | 45.0% | |
| GGATACTTGGGGTTCAAACA+AGG | + | chr7.4:953758-953777 | MS.gene22705:CDS | 45.0% | |
| GGGTTCTCACTTGGATACTT+GGG | + | chr7.4:953746-953765 | MS.gene22705:CDS | 45.0% | |
| GGTTCTCACTTGGATACTTG+GGG | + | chr7.4:953747-953766 | MS.gene22705:CDS | 45.0% | |
| GTATCCATTGAAACCCCATC+TGG | + | chr7.4:953534-953553 | MS.gene22705:CDS | 45.0% | |
| TCGTGAAACAGACAAGAAGG+TGG | + | chr7.4:954115-954134 | MS.gene22705:CDS | 45.0% | |
| TCTACGATGGAGGAGATTGA+TGG | + | chr7.4:953102-953121 | MS.gene22705:CDS | 45.0% | |
| ! | ACTTTTGACCAAAGCTCCTG+TGG | + | chr7.4:953716-953735 | MS.gene22705:CDS | 45.0% |
| ! | AGGTTTTTATGGCCAACCAG+CGG | + | chr7.4:953778-953797 | MS.gene22705:CDS | 45.0% |
| ! | AGTTTTACGGGATGCTGCAT+TGG | + | chr7.4:954211-954230 | MS.gene22705:CDS | 45.0% |
| ! | GCGGGAGCTATACAAACTTT+TGG | + | chr7.4:953296-953315 | MS.gene22705:CDS | 45.0% |
| ! | TGCATCCCTTTTGCGTACAA+AGG | + | chr7.4:952846-952865 | MS.gene22705:CDS | 45.0% |
| !! | ACTTCAAGATCAGCCGCTTT+TGG | + | chr7.4:954239-954258 | MS.gene22705:CDS | 45.0% |
| !! | CGCTTTTGGAGAAGATGATG+AGG | + | chr7.4:954253-954272 | MS.gene22705:CDS | 45.0% |
| !! | GGAAGAAGATTTTTGGGAGG+AGG | + | chr7.4:953503-953522 | MS.gene22705:CDS | 45.0% |
| !! | TGTCCTTGAGTGTTGGGTTT+CGG | + | chr7.4:952791-952810 | MS.gene22705:CDS | 45.0% |
| !!! | CCACCGTTTTGATTGCTTTG+AGG | - | chr7.4:952171-952190 | None:intergenic | 45.0% |
| !!! | CCGTTTTGATTGCTTTGAGG+AGG | - | chr7.4:952168-952187 | None:intergenic | 45.0% |
| AAAAGGGATGCAACAGACGG+AGG | - | chr7.4:952838-952857 | None:intergenic | 50.0% | |
| AAAGGGATGCAACAGACGGA+GGG | - | chr7.4:952837-952856 | None:intergenic | 50.0% | |
| ACTGACAGCCTACTTCATGG+GGG | + | chr7.4:953660-953679 | MS.gene22705:CDS | 50.0% | |
| AGAGGATTCGGCAAGAGAGA+AGG | + | chr7.4:952992-953011 | MS.gene22705:CDS | 50.0% | |
| AGCAAGTCGGAGCTCCAAAT+CGG | - | chr7.4:952203-952222 | None:intergenic | 50.0% | |
| AGCTTCCCTTCATCATCTCG+AGG | - | chr7.4:954005-954024 | None:intergenic | 50.0% | |
| AGGGAATGGAAAAGGAGCGA+AGG | + | chr7.4:952087-952106 | MS.gene22705:CDS | 50.0% | |
| CACACCAGATGGGGTTTCAA+TGG | - | chr7.4:953541-953560 | None:intergenic | 50.0% | |
| CACTGACAGCCTACTTCATG+GGG | + | chr7.4:953659-953678 | MS.gene22705:CDS | 50.0% | |
| CCAAAGCTCCTGTGGTAAGA+TGG | + | chr7.4:953724-953743 | MS.gene22705:CDS | 50.0% | |
| CCATCTTACCACAGGAGCTT+TGG | - | chr7.4:953727-953746 | None:intergenic | 50.0% | |
| CGCAAAAGGGATGCAACAGA+CGG | - | chr7.4:952841-952860 | None:intergenic | 50.0% | |
| GAGGATTCGGCAAGAGAGAA+GGG | + | chr7.4:952993-953012 | MS.gene22705:CDS | 50.0% | |
| GCTTGAGGACTTTCGCTCTT+TGG | + | chr7.4:953188-953207 | MS.gene22705:CDS | 50.0% | |
| GGCGAAAGAGAAGAAGGGAA+TGG | + | chr7.4:952073-952092 | MS.gene22705:CDS | 50.0% | |
| GGGAGAGATACTGTCTACGA+TGG | + | chr7.4:953089-953108 | MS.gene22705:CDS | 50.0% | |
| GGGGTTCTCACTTGGATACT+TGG | + | chr7.4:953745-953764 | MS.gene22705:CDS | 50.0% | |
| GGTAAGATGGGGTTCTCACT+TGG | + | chr7.4:953737-953756 | MS.gene22705:CDS | 50.0% | |
| GGTGGTTCGTTACTCCGATT+TGG | + | chr7.4:952186-952205 | MS.gene22705:CDS | 50.0% | |
| TGAGAAAAGGGGGACTCTGT+CGG | + | chr7.4:953937-953956 | MS.gene22705:CDS | 50.0% | |
| TGAGAACCCCATCTTACCAC+AGG | - | chr7.4:953735-953754 | None:intergenic | 50.0% | |
| TTTCAAGATCCAATCCCCGC+TGG | - | chr7.4:953797-953816 | None:intergenic | 50.0% | |
| ! | CAGAGTCCCCCTTTTCTCAA+AGG | - | chr7.4:953936-953955 | None:intergenic | 50.0% |
| ! | CCCCTTTTCTCAAAGGAGCA+CGG | - | chr7.4:953929-953948 | None:intergenic | 50.0% |
| ! | CCGTGCTCCTTTGAGAAAAG+GGG | + | chr7.4:953926-953945 | MS.gene22705:CDS | 50.0% |
| ! | CGTGCTCCTTTGAGAAAAGG+GGG | + | chr7.4:953927-953946 | MS.gene22705:CDS | 50.0% |
| ! | GCCGTGCTCCTTTGAGAAAA+GGG | + | chr7.4:953925-953944 | MS.gene22705:CDS | 50.0% |
| ! | GGTTTTTATGGCCAACCAGC+GGG | + | chr7.4:953779-953798 | MS.gene22705:CDS | 50.0% |
| ! | GTTTTTATGGCCAACCAGCG+GGG | + | chr7.4:953780-953799 | MS.gene22705:CDS | 50.0% |
| ! | TGCCGTGCTCCTTTGAGAAA+AGG | + | chr7.4:953924-953943 | MS.gene22705:CDS | 50.0% |
| ! | TTTCTCAAAGGAGCACGGCA+TGG | - | chr7.4:953924-953943 | None:intergenic | 50.0% |
| !! | CGGGGAAGAAGATTTTTGGG+AGG | + | chr7.4:953500-953519 | MS.gene22705:CDS | 50.0% |
| AAGATCCAATCCCCGCTGGT+TGG | - | chr7.4:953793-953812 | None:intergenic | 55.0% | |
| AAGGGATGCAACAGACGGAG+GGG | - | chr7.4:952836-952855 | None:intergenic | 55.0% | |
| AGAGAAGGGAGAGGGAGATG+AGG | + | chr7.4:953007-953026 | MS.gene22705:CDS | 55.0% | |
| CATGAAGCGTGATCACTCCC+AGG | + | chr7.4:952243-952262 | MS.gene22705:CDS | 55.0% | |
| GGCAACAAATTCCACCGCAC+CGG | + | chr7.4:952129-952148 | MS.gene22705:CDS | 55.0% | |
| TCGCCGAAACCCAACACTCA+AGG | - | chr7.4:952797-952816 | None:intergenic | 55.0% | |
| TCGGCAAGAGAGAAGGGAGA+GGG | + | chr7.4:952999-953018 | MS.gene22705:CDS | 55.0% | |
| TTCGGCAAGAGAGAAGGGAG+AGG | + | chr7.4:952998-953017 | MS.gene22705:CDS | 55.0% | |
| ! | TCAAAGGAGCACGGCATGGT+TGG | - | chr7.4:953920-953939 | None:intergenic | 55.0% |
| !! | TGGGAAGTTGATGCCACGTC+AGG | - | chr7.4:953585-953604 | None:intergenic | 55.0% |
| AGGAGGCGGTGATCGACATC+CGG | - | chr7.4:952151-952170 | None:intergenic | 60.0% | |
| ATGCAACAGACGGAGGGGCA+GGG | - | chr7.4:952831-952850 | None:intergenic | 60.0% | |
| TATGGCCAACCAGCGGGGAT+TGG | + | chr7.4:953785-953804 | MS.gene22705:CDS | 60.0% | |
| GATGCAACAGACGGAGGGGC+AGG | - | chr7.4:952832-952851 | None:intergenic | 65.0% | |
| GCGGTGATCGACATCCGGTG+CGG | - | chr7.4:952146-952165 | None:intergenic | 65.0% | |
| GTGATCGACATCCGGTGCGG+TGG | - | chr7.4:952143-952162 | None:intergenic | 65.0% | |
| ACAGACGGAGGGGCAGGGAG+CGG | - | chr7.4:952826-952845 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 952064 | 954379 | 952064 | ID=MS.gene22705 |
| chr7.4 | mRNA | 952064 | 954379 | 952064 | ID=MS.gene22705.t1;Parent=MS.gene22705 |
| chr7.4 | exon | 952064 | 952264 | 952064 | ID=MS.gene22705.t1.exon1;Parent=MS.gene22705.t1 |
| chr7.4 | CDS | 952064 | 952264 | 952064 | ID=cds.MS.gene22705.t1;Parent=MS.gene22705.t1 |
| chr7.4 | exon | 952700 | 954379 | 952700 | ID=MS.gene22705.t1.exon2;Parent=MS.gene22705.t1 |
| chr7.4 | CDS | 952700 | 954379 | 952700 | ID=cds.MS.gene22705.t1;Parent=MS.gene22705.t1 |
| Gene Sequence |
| Protein sequence |
