AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05241

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05241.t1 MTR_6g078450 84.170 518 80 2 1 516 1 518 0.0 923
MS.gene05241.t1 MTR_6g078380 85.824 522 71 3 1 519 1 522 0.0 922
MS.gene05241.t1 MTR_6g078330 75.534 515 126 0 5 519 8 522 0.0 838
MS.gene05241.t1 MTR_6g078450 84.902 457 67 2 1 455 1 457 0.0 820
MS.gene05241.t1 MTR_4g066580 67.375 518 162 3 1 512 1 517 0.0 741
MS.gene05241.t1 MTR_3g028720 66.474 519 164 3 1 512 1 516 0.0 739
MS.gene05241.t1 MTR_2g098520 70.124 482 143 1 29 510 30 510 0.0 733
MS.gene05241.t1 MTR_2g098790 66.926 514 164 3 1 509 1 513 0.0 733
MS.gene05241.t1 MTR_2g098540 68.000 500 156 2 11 510 12 507 0.0 727
MS.gene05241.t1 MTR_4g066590 67.418 488 159 0 24 511 23 510 0.0 718
MS.gene05241.t1 MTR_4g066240 65.476 504 170 1 10 509 8 511 0.0 712
MS.gene05241.t1 MTR_4g066630 67.500 480 156 0 33 512 38 517 0.0 710
MS.gene05241.t1 MTR_4g066240 65.347 505 170 2 10 509 8 512 0.0 708
MS.gene05241.t1 MTR_4g066210 67.857 476 153 0 34 509 43 518 0.0 706
MS.gene05241.t1 MTR_6g078330 77.512 418 94 0 102 519 1 418 0.0 699
MS.gene05241.t1 MTR_2g098540 69.432 458 140 0 53 510 6 463 0.0 693
MS.gene05241.t1 MTR_5g071520 64.313 524 173 2 1 510 1 524 0.0 679
MS.gene05241.t1 MTR_4g066640 61.024 508 187 4 11 510 9 513 0.0 669
MS.gene05241.t1 MTR_6g078330 75.369 406 98 1 114 519 15 418 0.0 659
MS.gene05241.t1 MTR_4g066330 62.500 512 159 5 2 511 14 494 0.0 659
MS.gene05241.t1 MTR_3g028720 66.450 462 145 3 1 455 1 459 0.0 653
MS.gene05241.t1 MTR_4g066340 68.750 432 135 0 78 509 7 438 0.0 643
MS.gene05241.t1 MTR_4g066280 60.159 502 171 4 11 509 17 492 0.0 635
MS.gene05241.t1 MTR_4g066630 68.246 422 134 0 33 454 38 459 0.0 632
MS.gene05241.t1 MTR_3g026280 61.875 480 178 2 31 510 19 493 0.0 630
MS.gene05241.t1 MTR_4g023000 58.704 494 198 3 16 509 6 493 0.0 615
MS.gene05241.t1 MTR_4g066580 68.531 429 128 3 1 423 1 428 0.0 614
MS.gene05241.t1 MTR_3g028720 67.840 426 127 3 1 419 1 423 0.0 611
MS.gene05241.t1 MTR_6g078330 75.676 370 90 0 5 374 8 377 0.0 610
MS.gene05241.t1 MTR_4g066630 70.284 387 115 0 33 419 38 424 0.0 595
MS.gene05241.t1 MTR_4g066240 65.217 414 140 1 10 419 8 421 0.0 579
MS.gene05241.t1 MTR_4g067040 69.867 375 113 0 33 407 33 407 0.0 572
MS.gene05241.t1 MTR_4g083000 54.257 505 224 4 7 509 3 502 0.0 571
MS.gene05241.t1 MTR_4g015420 56.600 500 177 7 22 509 53 524 0.0 564
MS.gene05241.t1 MTR_3g026400 55.975 477 204 4 33 508 36 507 0.0 563
MS.gene05241.t1 MTR_3g028720 67.352 389 117 3 1 382 1 386 0.0 558
MS.gene05241.t1 MTR_2g043200 57.233 477 170 5 39 509 70 518 0.0 551
MS.gene05241.t1 MTR_4g067040 71.714 350 99 0 33 382 33 382 0.0 549
MS.gene05241.t1 MTR_3g026620 53.438 509 226 4 7 508 4 508 0.0 545
MS.gene05241.t1 MTR_3g026400 55.246 467 201 5 43 508 17 476 0.0 539
MS.gene05241.t1 MTR_5g044000 51.243 523 225 7 13 508 1 520 0.0 536
MS.gene05241.t1 MTR_4g015460 54.563 504 190 8 21 513 29 504 0.0 535
MS.gene05241.t1 MTR_4g066630 71.598 338 96 0 33 370 38 375 0.0 533
MS.gene05241.t1 MTR_4g081530 51.683 505 236 5 11 512 3 502 0.0 521
MS.gene05241.t1 MTR_0110s0040 50.199 502 242 6 10 511 20 513 4.16e-177 508
MS.gene05241.t1 MTR_0110s0030 49.203 502 247 6 10 511 20 513 2.30e-174 501
MS.gene05241.t1 MTR_4g066640 60.417 384 141 4 11 386 9 389 3.44e-174 496
MS.gene05241.t1 MTR_3g033790 49.378 482 230 5 31 512 16 483 1.21e-170 491
MS.gene05241.t1 MTR_3g033810 50.000 478 226 4 32 509 19 483 1.09e-169 489
MS.gene05241.t1 MTR_4g131810 49.049 473 236 4 39 508 33 503 1.86e-166 481
MS.gene05241.t1 MTR_2g079580 47.347 490 247 6 27 512 25 507 6.89e-162 470
MS.gene05241.t1 MTR_2g079550 47.551 490 246 6 27 512 23 505 1.30e-160 467
MS.gene05241.t1 MTR_4g083000 54.390 410 183 2 102 509 1 408 2.48e-160 462
MS.gene05241.t1 MTR_2g022760 46.457 508 262 7 10 512 12 514 4.18e-160 465
MS.gene05241.t1 MTR_4g131800 48.016 504 253 9 13 512 495 993 1.06e-156 473
MS.gene05241.t1 MTR_7g068910 45.029 513 263 8 1 511 1 496 3.10e-151 442
MS.gene05241.t1 MTR_2g022710 44.737 494 262 7 24 514 29 514 4.84e-151 442
MS.gene05241.t1 MTR_7g068910 44.168 523 263 9 1 511 1 506 9.03e-148 434
MS.gene05241.t1 MTR_4g016920 45.041 484 248 7 33 513 26 494 1.64e-146 431
MS.gene05241.t1 MTR_3g026400 59.561 319 126 2 33 351 36 351 4.70e-141 411
MS.gene05241.t1 MTR_7g033860 44.444 477 246 7 36 508 50 511 5.39e-141 416
MS.gene05241.t1 MTR_5g068740 42.996 514 263 10 1 509 1 489 7.54e-141 416
MS.gene05241.t1 MTR_1g088610 42.940 517 258 10 1 509 1 488 7.94e-140 417
MS.gene05241.t1 MTR_1g088610 34.722 144 71 3 383 509 476 613 2.92e-19 91.7
MS.gene05241.t1 MTR_0108s0030 42.918 473 241 4 36 508 5 448 9.90e-137 403
MS.gene05241.t1 MTR_2g079580 48.866 397 193 5 27 419 25 415 4.01e-134 395
MS.gene05241.t1 MTR_7g051610 43.515 478 248 8 35 510 76 533 2.78e-129 387
MS.gene05241.t1 MTR_7g051510 44.561 478 239 10 35 508 76 531 1.17e-128 385
MS.gene05241.t1 MTR_2g022760 46.154 416 214 7 102 512 1 411 4.36e-128 380
MS.gene05241.t1 MTR_2g022710 44.240 434 233 5 24 455 29 455 2.14e-127 380
MS.gene05241.t1 MTR_2g022710 44.240 434 233 5 24 455 29 455 4.80e-127 379
MS.gene05241.t1 MTR_7g051650 42.531 482 254 6 35 513 76 537 1.20e-125 378
MS.gene05241.t1 MTR_0110s0040 49.441 358 176 4 10 367 20 372 2.59e-124 370
MS.gene05241.t1 MTR_7g051650 42.116 482 252 6 35 513 76 533 4.09e-124 374
MS.gene05241.t1 MTR_2g022710 45.729 398 207 5 24 419 29 419 5.46e-123 367
MS.gene05241.t1 MTR_2g022710 43.269 416 230 5 102 514 1 413 1.49e-121 363
MS.gene05241.t1 MTR_1g088630 42.151 465 215 10 53 509 14 432 7.60e-120 360
MS.gene05241.t1 MTR_7g068900 44.286 420 218 5 97 513 17 423 7.43e-119 358
MS.gene05241.t1 MTR_4g016920 43.133 415 219 6 102 513 1 401 1.95e-117 353
MS.gene05241.t1 MTR_2g022710 45.312 384 201 5 24 405 29 405 5.17e-117 351
MS.gene05241.t1 MTR_2g022710 46.260 361 185 5 24 382 29 382 5.02e-110 334
MS.gene05241.t1 MTR_7g056747 40.811 419 222 4 96 513 9 402 1.41e-104 319
MS.gene05241.t1 MTR_1g088630 46.018 339 152 6 36 372 29 338 1.38e-99 305
MS.gene05241.t1 MTR_4g016920 49.817 273 134 2 102 373 1 271 1.92e-92 285
MS.gene05241.t1 MTR_1g088630 51.504 266 123 3 36 300 29 289 4.37e-91 281
MS.gene05241.t1 MTR_0110s0020 51.867 241 112 3 34 274 43 279 6.04e-87 270
MS.gene05241.t1 MTR_5g069350 43.820 178 47 5 348 509 48 188 1.51e-32 123
MS.gene05241.t1 MTR_4g122980 25.822 426 243 12 98 517 183 541 1.48e-28 120
MS.gene05241.t1 MTR_8g038650 41.525 118 59 1 248 355 35 152 1.81e-23 97.4
MS.gene05241.t1 MTR_8g038650 57.407 54 22 1 43 96 7 59 5.93e-13 67.4
MS.gene05241.t1 MTR_6g078770 50.000 80 22 2 1 79 1 63 8.43e-13 69.7
MS.gene05241.t1 MTR_6g078770 50.000 80 22 2 1 79 1 63 1.11e-12 69.7
MS.gene05241.t1 MTR_4g061170 55.769 52 21 1 446 495 13 64 6.55e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05241.t1 AT2G44480 55.943 488 214 1 30 517 31 517 0.0 583
MS.gene05241.t1 AT2G44480 55.943 488 214 1 30 517 62 548 0.0 583
MS.gene05241.t1 AT5G44640 54.839 496 211 4 24 511 14 504 0.0 581
MS.gene05241.t1 AT5G42260 55.070 503 214 4 3 504 6 497 0.0 579
MS.gene05241.t1 AT2G44450 55.579 484 210 2 28 511 25 503 0.0 578
MS.gene05241.t1 AT3G60130 55.765 477 205 3 34 509 30 501 0.0 556
MS.gene05241.t1 AT1G26560 53.734 482 217 4 30 508 28 506 0.0 545
MS.gene05241.t1 AT2G25630 51.292 503 215 5 17 511 6 486 0.0 531
MS.gene05241.t1 AT5G54570 52.990 485 215 4 31 508 27 505 0.0 531
MS.gene05241.t1 AT3G60140 50.400 500 241 6 25 519 16 513 0.0 528
MS.gene05241.t1 AT5G24550 50.936 481 231 5 34 510 32 511 0.0 523
MS.gene05241.t1 AT1G47600 52.599 481 216 5 29 508 40 509 3.34e-180 516
MS.gene05241.t1 AT1G51470 52.807 481 215 5 29 508 40 509 1.13e-179 515
MS.gene05241.t1 AT1G47600 52.183 481 217 5 29 508 40 508 5.67e-179 513
MS.gene05241.t1 AT3G60120 51.245 482 228 6 33 510 13 491 5.09e-176 506
MS.gene05241.t1 AT5G24540 48.738 515 255 7 1 510 1 511 3.63e-175 504
MS.gene05241.t1 AT3G18080 52.301 478 220 6 34 510 39 509 1.29e-174 502
MS.gene05241.t1 AT2G44460 50.515 485 233 6 31 511 26 507 1.34e-174 504
MS.gene05241.t1 AT3G18070 50.522 479 219 8 34 510 30 492 5.21e-172 495
MS.gene05241.t1 AT3G18070 50.000 492 230 9 21 510 21 498 2.90e-171 493
MS.gene05241.t1 AT2G44480 54.327 416 189 1 102 517 1 415 1.13e-170 488
MS.gene05241.t1 AT2G44470 46.450 493 258 5 31 519 26 516 5.94e-170 493
MS.gene05241.t1 AT5G36890 49.177 486 234 4 25 509 7 480 2.28e-167 483
MS.gene05241.t1 AT2G44490 47.826 483 244 6 33 509 13 493 2.87e-167 485
MS.gene05241.t1 AT5G36890 49.177 486 234 4 25 509 7 480 3.43e-167 482
MS.gene05241.t1 AT3G60130 55.181 415 180 3 96 509 40 449 2.77e-166 479
MS.gene05241.t1 AT5G25980 46.899 516 264 8 1 512 17 526 6.61e-166 481
MS.gene05241.t1 AT5G26000 46.667 525 262 9 1 518 5 518 4.50e-161 469
MS.gene05241.t1 AT5G54570 51.740 431 196 3 31 455 27 451 1.90e-160 464
MS.gene05241.t1 AT3G21370 46.091 486 252 7 31 509 30 512 1.33e-158 462
MS.gene05241.t1 AT1G61820 47.510 482 245 6 33 510 29 506 3.03e-157 458
MS.gene05241.t1 AT3G60130 53.253 415 177 4 96 509 40 438 4.98e-157 455
MS.gene05241.t1 AT1G75940 46.215 502 256 8 18 509 21 518 5.25e-157 458
MS.gene05241.t1 AT3G03640 43.527 533 282 8 1 519 1 528 7.75e-157 457
MS.gene05241.t1 AT3G09260 45.661 484 256 6 31 510 32 512 1.25e-156 457
MS.gene05241.t1 AT2G32860 45.661 484 256 4 33 511 93 574 2.21e-156 459
MS.gene05241.t1 AT5G28510 44.466 515 273 8 3 508 9 519 2.43e-156 456
MS.gene05241.t1 AT2G32860 46.058 482 256 4 33 511 93 573 2.72e-156 459
MS.gene05241.t1 AT4G27830 45.090 499 253 7 14 508 3 484 1.58e-152 446
MS.gene05241.t1 AT1G52400 45.808 489 249 10 30 509 35 516 5.72e-152 445
MS.gene05241.t1 AT1G52400 45.808 489 249 10 30 509 35 516 5.72e-152 445
MS.gene05241.t1 AT1G61810 44.356 505 273 6 10 510 9 509 1.66e-151 443
MS.gene05241.t1 AT1G66280 45.472 508 264 8 6 508 11 510 2.10e-151 443
MS.gene05241.t1 AT4G21760 45.248 484 251 8 38 517 58 531 7.79e-151 442
MS.gene05241.t1 AT5G54570 51.691 414 187 4 102 508 1 408 1.14e-149 436
MS.gene05241.t1 AT1G02850 45.912 477 239 6 35 509 27 486 2.66e-148 434
MS.gene05241.t1 AT5G25980 46.827 457 235 6 1 455 17 467 2.40e-147 431
MS.gene05241.t1 AT5G25980 46.827 457 235 6 1 455 17 467 2.40e-147 431
MS.gene05241.t1 AT5G24540 47.380 458 233 6 1 454 1 454 3.88e-147 430
MS.gene05241.t1 AT1G66270 45.963 483 251 7 31 508 33 510 1.72e-146 431
MS.gene05241.t1 AT1G61810 44.694 490 263 6 10 495 9 494 6.89e-146 430
MS.gene05241.t1 AT4G27820 45.135 483 240 7 31 508 20 482 1.06e-144 426
MS.gene05241.t1 AT4G21760 44.421 484 245 9 38 517 58 521 5.59e-144 425
MS.gene05241.t1 AT3G60140 49.637 413 200 6 25 433 16 424 5.95e-144 422
MS.gene05241.t1 AT1G02850 44.000 500 238 7 35 509 27 509 1.12e-143 423
MS.gene05241.t1 AT5G26000 46.739 460 232 6 1 455 5 456 1.40e-143 421
MS.gene05241.t1 AT1G66270 45.756 483 250 8 31 508 33 508 1.96e-143 423
MS.gene05241.t1 AT2G44470 45.667 427 227 4 31 454 26 450 9.35e-143 419
MS.gene05241.t1 AT1G02850 44.112 501 237 8 35 509 27 510 2.62e-142 420
MS.gene05241.t1 AT2G44450 53.501 357 161 2 155 511 1 352 8.52e-141 410
MS.gene05241.t1 AT2G44480 60.000 315 124 2 30 344 62 374 1.25e-139 409
MS.gene05241.t1 AT3G62750 43.426 502 245 10 14 508 4 473 2.24e-139 412
MS.gene05241.t1 AT3G62750 43.426 502 245 10 14 508 30 499 4.68e-139 412
MS.gene05241.t1 AT1G02850 44.235 477 220 7 35 509 27 459 1.96e-137 405
MS.gene05241.t1 AT1G60090 42.376 505 266 10 13 513 4 487 2.09e-136 404
MS.gene05241.t1 AT4G22100 42.430 502 267 9 16 513 4 487 3.32e-136 404
MS.gene05241.t1 AT1G60090 41.797 512 266 10 13 513 4 494 7.71e-136 403
MS.gene05241.t1 AT3G62740 41.153 503 258 10 10 508 10 478 4.53e-133 395
MS.gene05241.t1 AT1G45191 42.827 481 253 9 35 511 30 492 3.31e-130 389
MS.gene05241.t1 AT1G45191 43.182 484 252 10 35 511 30 497 8.17e-130 388
MS.gene05241.t1 AT1G45191 42.562 484 244 10 35 511 30 486 2.34e-129 386
MS.gene05241.t1 AT1G45191 42.915 494 251 11 35 511 30 509 8.23e-129 385
MS.gene05241.t1 AT1G52400 44.804 433 224 9 30 454 35 460 1.22e-126 378
MS.gene05241.t1 AT2G44470 45.652 368 195 4 31 395 26 391 7.14e-123 366
MS.gene05241.t1 AT4G27830 44.526 411 209 6 102 508 1 396 3.57e-122 365
MS.gene05241.t1 AT1G61810 43.826 413 224 6 102 510 1 409 1.19e-121 363
MS.gene05241.t1 AT1G02850 45.721 409 187 5 35 419 27 424 2.04e-121 363
MS.gene05241.t1 AT3G62750 42.444 450 221 9 14 457 30 447 3.31e-118 356
MS.gene05241.t1 AT1G61810 43.478 414 227 5 10 419 9 419 1.79e-117 353
MS.gene05241.t1 AT4G27820 44.660 412 208 6 102 508 1 397 2.32e-117 352
MS.gene05241.t1 AT4G27820 44.660 412 208 6 102 508 1 397 2.32e-117 352
MS.gene05241.t1 AT2G44460 49.311 363 178 5 153 511 1 361 1.73e-116 351
MS.gene05241.t1 AT3G18070 49.704 338 159 6 21 358 21 347 4.51e-116 348
MS.gene05241.t1 AT3G62740 41.071 448 227 9 10 454 10 423 6.86e-115 346
MS.gene05241.t1 AT5G48375 40.605 463 198 9 20 476 24 415 4.13e-114 345
MS.gene05241.t1 AT1G51490 48.851 348 163 6 41 386 27 361 1.80e-110 335
MS.gene05241.t1 AT1G60270 46.409 362 181 6 16 373 6 358 7.26e-110 332
MS.gene05241.t1 AT3G62750 46.784 342 165 5 14 355 4 328 8.35e-109 329
MS.gene05241.t1 AT3G62750 46.784 342 165 5 14 355 4 328 8.35e-109 329
MS.gene05241.t1 AT3G18070 49.249 333 162 5 180 510 94 421 1.12e-108 330
MS.gene05241.t1 AT3G18070 52.632 76 31 2 21 96 21 91 1.14e-16 82.8
MS.gene05241.t1 AT2G44480 49.839 311 155 1 207 517 2 311 2.51e-108 325
MS.gene05241.t1 AT1G61820 44.414 367 197 5 148 510 4 367 5.78e-108 327
MS.gene05241.t1 AT3G62750 46.784 342 165 5 14 355 30 354 9.74e-108 328
MS.gene05241.t1 AT3G62750 41.787 414 208 8 102 508 1 388 1.04e-107 327
MS.gene05241.t1 AT3G62750 41.787 414 208 8 102 508 1 388 1.04e-107 327
MS.gene05241.t1 AT1G45191 42.338 385 197 7 35 416 30 392 1.05e-103 317
MS.gene05241.t1 AT1G45191 42.784 388 196 8 35 416 30 397 3.41e-103 316
MS.gene05241.t1 AT3G18070 49.363 314 152 5 199 510 1 309 5.18e-102 309
MS.gene05241.t1 AT1G61810 48.136 295 149 3 10 303 9 300 4.41e-93 286
MS.gene05241.t1 AT1G60270 47.464 276 136 5 102 373 1 271 5.13e-81 254
MS.gene05241.t1 AT3G18070 45.267 243 129 3 180 420 94 334 1.59e-68 224
MS.gene05241.t1 AT3G18070 52.632 76 31 2 21 96 21 91 5.12e-17 82.8
MS.gene05241.t1 AT3G18070 44.889 225 120 3 199 421 1 223 3.02e-62 204
MS.gene05241.t1 AT5G16580 39.519 291 153 7 180 465 27 299 1.45e-51 178
MS.gene05241.t1 AT3G06510 26.498 434 232 15 97 517 159 518 9.38e-28 117
MS.gene05241.t1 AT3G06510 26.374 455 240 17 97 517 159 552 1.20e-27 117

Find 114 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTAAATGTTCTTCTTTC+TGG 0.049327 6.2:+77882303 MS.gene05241:CDS
AAATGTCAGCCATTTGGTTT+AGG 0.220462 6.2:+77887762 MS.gene05241:CDS
TTGATCTATATCACTGAAAA+TGG 0.261422 6.2:+77887133 MS.gene05241:CDS
TGTTGTGATTCTTAACTCTT+TGG 0.264243 6.2:+77882329 MS.gene05241:CDS
TTGCTTACTTGGAAGTATTC+TGG 0.267931 6.2:-77883190 None:intergenic
AATGTCAGCCATTTGGTTTA+GGG 0.290107 6.2:+77887763 MS.gene05241:CDS
GAGGAAGGTCCCAATGAAAA+AGG 0.297919 6.2:-77884103 None:intergenic
GCCACTCTATGATACAAAAT+TGG 0.298973 6.2:+77885282 MS.gene05241:CDS
AGAGCCATTGATTTCATGTT+TGG 0.306421 6.2:+77885322 MS.gene05241:CDS
TGATCAATACCATCGTTATA+AGG 0.309617 6.2:+77882926 MS.gene05241:CDS
TAACCTCATCAATGAGCTTC+TGG 0.326995 6.2:+77883984 MS.gene05241:CDS
ACATCTCAACAGGGCAAGAT+AGG 0.328217 6.2:+77885232 MS.gene05241:CDS
CATTGATTGACAACTTTGAA+TGG 0.334348 6.2:+77887669 MS.gene05241:CDS
TTATTATGAGCCGCGATATA+GGG 0.339141 6.2:-77884444 None:intergenic
CAAACTCTTGAAGAAGAATA+TGG 0.340474 6.2:+77884125 MS.gene05241:CDS
AACATCTTCATCTGCATATC+AGG 0.343664 6.2:+77882437 MS.gene05241:CDS
ATCTGTGATGTAGCTGGGTT+TGG 0.344206 6.2:-77885733 None:intergenic
GTGGCAAAGGACCAAGTATA+TGG 0.345591 6.2:+77882647 MS.gene05241:CDS
CAATCCTTTGTGTGTCTTCA+AGG 0.355425 6.2:-77887441 None:intergenic
ACATGCAGGCAGCTTCAAAA+TGG 0.356308 6.2:+77887044 MS.gene05241:intron
GACAACTTTGAATGGACTTC+AGG 0.356473 6.2:+77887677 MS.gene05241:CDS
TGTCTACAAAACTAAGTATC+AGG 0.359104 6.2:+77884494 MS.gene05241:CDS
GATTGGTGGAGGTGTAAATA+AGG 0.373123 6.2:+77883942 MS.gene05241:CDS
GAGGGATTTGCTAATATCAT+TGG 0.373239 6.2:-77882379 None:intergenic
TTTATTATGAGCCGCGATAT+AGG 0.376943 6.2:-77884445 None:intergenic
TAACTTTACAGGTAAGATAA+AGG 0.377900 6.2:+77882878 MS.gene05241:intron
TACTTCGTAGATTACAATAA+TGG 0.378278 6.2:+77887722 MS.gene05241:CDS
TTAATTGCAGAAGGAAAGAT+TGG 0.380831 6.2:+77883925 MS.gene05241:intron
GATGTGAATTACACTATATT+AGG 0.385976 6.2:-77884161 None:intergenic
TCAGGCTACACTTCAAGGTT+TGG 0.387145 6.2:+77887695 MS.gene05241:CDS
AATGATGAAGGACATCAATA+TGG 0.390972 6.2:+77883140 MS.gene05241:CDS
ACTTGATATGTAGAAAACTT+TGG 0.393184 6.2:-77885624 None:intergenic
TTTATGGATCCATTGACAAT+AGG 0.394559 6.2:+77885558 MS.gene05241:CDS
GGACTTCAGGCTACACTTCA+AGG 0.395818 6.2:+77887690 MS.gene05241:CDS
GCACATACCGTTGGGCCAAT+AGG 0.402277 6.2:-77886894 None:intergenic
GGGTGCATTAGTTGCATAAT+GGG 0.404463 6.2:-77885697 None:intergenic
AATCGACAAATTTAGTATGA+AGG 0.412084 6.2:+77882610 MS.gene05241:intron
TATCAAGTAAAGCTTGTAAG+AGG 0.412431 6.2:+77885639 MS.gene05241:CDS
GTGTACACAGACATCTCAAC+AGG 0.414741 6.2:+77885222 MS.gene05241:intron
CGGGTGCATTAGTTGCATAA+TGG 0.417931 6.2:-77885698 None:intergenic
TGGGAAATTACTTCGATTGA+GGG 0.422951 6.2:-77882397 None:intergenic
TATTCTTCTTCAAGAGTTTG+AGG 0.425331 6.2:-77884122 None:intergenic
GGGTTTGGCTTCACTTAACT+CGG 0.442075 6.2:-77885718 None:intergenic
TTTCAGTGATATAGATCAAC+GGG 0.447228 6.2:-77887129 None:intergenic
AGCTCCATGCGGTCCTTGGT+AGG 0.451981 6.2:+77885591 MS.gene05241:CDS
AATCGCAATGGAATACCTAT+TGG 0.453277 6.2:+77886879 MS.gene05241:CDS
CCCTAGCTCCATGCGGTCCT+TGG 0.454487 6.2:+77885587 MS.gene05241:CDS
GTGGGAAATTACTTCGATTG+AGG 0.468623 6.2:-77882398 None:intergenic
TCCATCAGCATAAGCATGCT+TGG 0.472004 6.2:-77884352 None:intergenic
CAAAGGATTGATTACTATCA+TGG 0.481431 6.2:+77887454 MS.gene05241:CDS
CATCAATGAGCTTCTGGCCA+AGG 0.482325 6.2:+77883990 MS.gene05241:CDS
AATCCTTTGTGTGTCTTCAA+GGG 0.484608 6.2:-77887440 None:intergenic
TGGTTATCAATTTATCCAAA+GGG 0.494731 6.2:+77887064 MS.gene05241:CDS
AAGATAAAGGACAAAAGTAA+TGG 0.495706 6.2:+77882891 MS.gene05241:CDS
TAGGAAATCCCTAAACCAAA+TGG 0.497280 6.2:-77887771 None:intergenic
TGGTCCTTTGCCACCAACAT+TGG 0.500603 6.2:-77882638 None:intergenic
AAGTGAATCTGTGATGTAGC+TGG 0.501010 6.2:-77885739 None:intergenic
GGGTAGTCTCCTATTGTCAA+TGG 0.501063 6.2:-77885567 None:intergenic
AATAGGTCATGAATTCCCTT+TGG 0.502202 6.2:-77887079 None:intergenic
GCAGCCAATGTTGGTGGCAA+AGG 0.506097 6.2:+77882634 MS.gene05241:CDS
CCATCCAAACATGAAATCAA+TGG 0.508555 6.2:-77885326 None:intergenic
ATGGTTATCAATTTATCCAA+AGG 0.512637 6.2:+77887063 MS.gene05241:CDS
GCCAAGCATGCTTATGCTGA+TGG 0.514658 6.2:+77884351 MS.gene05241:CDS
ACCAAGGACCGCATGGAGCT+AGG 0.516896 6.2:-77885588 None:intergenic
GGGATGGTGCGAATGTGAAC+GGG 0.519031 6.2:+77887633 MS.gene05241:intron
ACTTTCACACATAATTATCC+AGG 0.520794 6.2:+77882673 MS.gene05241:CDS
CCAAGGACCGCATGGAGCTA+GGG 0.523458 6.2:-77885587 None:intergenic
CCATTGATTTCATGTTTGGA+TGG 0.528755 6.2:+77885326 MS.gene05241:CDS
GCTTTCTCAAGAGGGAGTGT+TGG 0.529097 6.2:-77887418 None:intergenic
TTCAGTGGCGGAATCTCCAC+CGG 0.537381 6.2:-77884421 None:intergenic
ATTGCAGAAGGAAAGATTGG+TGG 0.538980 6.2:+77883928 MS.gene05241:intron
TTGGAGATAGAGTAAAGCAT+TGG 0.540163 6.2:+77884301 MS.gene05241:CDS
AGGGATGGTGCGAATGTGAA+CGG 0.547980 6.2:+77887632 MS.gene05241:intron
TGCCAGGGTGAACATCGACC+AGG 0.548000 6.2:-77884384 None:intergenic
CTTCTTCAAGAGTTTGAGGA+AGG 0.549021 6.2:-77884118 None:intergenic
TGGCAAAGGACCAAGTATAT+GGG 0.550285 6.2:+77882648 MS.gene05241:CDS
GCTCCATGCGGTCCTTGGTA+GGG 0.552456 6.2:+77885592 MS.gene05241:CDS
CTTCAAGGGCTTTCTCAAGA+GGG 0.553607 6.2:-77887426 None:intergenic
CATCTCAACAGGGCAAGATA+GGG 0.554782 6.2:+77885233 MS.gene05241:CDS
TCTTCAAGGGCTTTCTCAAG+AGG 0.557439 6.2:-77887427 None:intergenic
GCAGAAGGAAAGATTGGTGG+AGG 0.557751 6.2:+77883931 MS.gene05241:intron
AAGTATTCTGGACCAAGAGA+TGG 0.559511 6.2:-77883178 None:intergenic
ATCAATGAGCTTCTGGCCAA+GGG 0.562187 6.2:+77883991 MS.gene05241:CDS
GGTTTGGCTTCACTTAACTC+GGG 0.563688 6.2:-77885717 None:intergenic
GGTGGAGGTGTAAATAAGGA+AGG 0.565682 6.2:+77883946 MS.gene05241:CDS
TGGCAAAACTTGAATTGCAC+CGG 0.571341 6.2:+77884402 MS.gene05241:CDS
GTGAAAGTATCCCATATACT+TGG 0.571422 6.2:-77882658 None:intergenic
GTTTAATCCAATAAAATCAA+AGG 0.577644 6.2:-77885664 None:intergenic
ATGTGAACGGGTACTTTGCA+TGG 0.582215 6.2:+77887645 MS.gene05241:CDS
GCATGCTTGGCAAAGCTCCA+TGG 0.583054 6.2:-77884339 None:intergenic
AACATTAATGTGTCAGTGGA+TGG 0.588696 6.2:+77885258 MS.gene05241:CDS
GGAAGATGTTGAAATGATGA+AGG 0.589403 6.2:+77883128 MS.gene05241:intron
CACCTGGTCGATGTTCACCC+TGG 0.589434 6.2:+77884382 MS.gene05241:CDS
ACTCCCTACCAAGGACCGCA+TGG 0.607116 6.2:-77885595 None:intergenic
AATCGAAGTAATTTCCCACA+AGG 0.607295 6.2:+77882402 MS.gene05241:CDS
GAAGGTGCAGCCAATGTTGG+TGG 0.614271 6.2:+77882628 MS.gene05241:CDS
TGGAATACCTATTGGCCCAA+CGG 0.614932 6.2:+77886887 MS.gene05241:CDS
GGTATTGAACCTTATAACGA+TGG 0.616056 6.2:-77882935 None:intergenic
TATGAAGGTGCAGCCAATGT+TGG 0.618565 6.2:+77882625 MS.gene05241:CDS
CAAAACTTGAATTGCACCGG+TGG 0.620786 6.2:+77884405 MS.gene05241:CDS
TGGCCAGAAGCTCATTGATG+AGG 0.621990 6.2:-77883987 None:intergenic
ATCAAGTAAAGCTTGTAAGA+GGG 0.625020 6.2:+77885640 MS.gene05241:CDS
GGATAACATTAATGTGTCAG+TGG 0.627418 6.2:+77885254 MS.gene05241:CDS
GCTGATGGAAAGTTAGCACC+TGG 0.627941 6.2:+77884366 MS.gene05241:CDS
AGTGAATCTGTGATGTAGCT+GGG 0.637641 6.2:-77885738 None:intergenic
ACTCTTGAAGAAGAATATGG+TGG 0.648422 6.2:+77884128 MS.gene05241:CDS
GGATCACATTGAATGAACCA+TGG 0.651187 6.2:+77884322 MS.gene05241:CDS
CGCGATATAGGGTTCAGTGG+CGG 0.664027 6.2:-77884433 None:intergenic
TGGTAATCGACTCCCTACCA+AGG 0.679691 6.2:-77885604 None:intergenic
AGCCGCGATATAGGGTTCAG+TGG 0.679947 6.2:-77884436 None:intergenic
AAGCCCTTGAAGACACACAA+AGG 0.680808 6.2:+77887437 MS.gene05241:CDS
CGCCACTGAACCCTATATCG+CGG 0.707233 6.2:+77884434 MS.gene05241:CDS
TGTACACAGACATCTCAACA+GGG 0.744686 6.2:+77885223 MS.gene05241:intron
GAGACTACCCTAGCTCCATG+CGG 0.758435 6.2:+77885580 MS.gene05241:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATATTATAAATTTAT+AGG - chr6.2:77883886-77883905 None:intergenic 0.0%
!! ATTAATATTATAAATTTATA+GGG - chr6.2:77883885-77883904 None:intergenic 0.0%
!! AATTAAAATGTAAAAACATT+AGG - chr6.2:77886939-77886958 None:intergenic 10.0%
!! ATAATAATTGTTCAAAAAAA+AGG + chr6.2:77883043-77883062 MS.gene05241:intron 10.0%
!! TAAAAGAATATTGAAATATT+TGG - chr6.2:77882467-77882486 None:intergenic 10.0%
!! TACTGTATTATTAATATTAA+TGG - chr6.2:77885803-77885822 None:intergenic 10.0%
!! TATATTGTGAATTTATATAT+AGG + chr6.2:77887376-77887395 MS.gene05241:intron 10.0%
!!! ACTTTTTTTTAAAAATAGTA+AGG - chr6.2:77883833-77883852 None:intergenic 10.0%
!!! GTTTTCATTTTATATTTTTT+TGG + chr6.2:77886990-77887009 MS.gene05241:intron 10.0%
!!! TATCGTTAATTTAATTTTTT+CGG - chr6.2:77887539-77887558 None:intergenic 10.0%
!! ATATAATGCTTATTTCAATT+AGG + chr6.2:77886968-77886987 MS.gene05241:intron 15.0%
!! ATCAACAAAAAATAAAAAAG+AGG - chr6.2:77882706-77882725 None:intergenic 15.0%
!! TACATAAATGAAAAAAGTAA+TGG - chr6.2:77882800-77882819 None:intergenic 15.0%
!! TATATATGATAGTATATGAT+AGG + chr6.2:77884671-77884690 MS.gene05241:intron 15.0%
!! TCACTATTAATATTAACTTA+AGG + chr6.2:77883761-77883780 MS.gene05241:intron 15.0%
!!! AATTTTATCCAAATTTTACA+AGG + chr6.2:77887612-77887631 MS.gene05241:intron 15.0%
!!! ATTTTATCCAAATTTTACAA+GGG + chr6.2:77887613-77887632 MS.gene05241:intron 15.0%
!!! ATTTTTTAAGGAGTTTATTT+TGG - chr6.2:77885060-77885079 None:intergenic 15.0%
!!! CTTTTTAAAAAATGTATTGT+AGG + chr6.2:77885535-77885554 MS.gene05241:intron 15.0%
!!! TAGCATTTTCTTTTTTTTTT+AGG - chr6.2:77883304-77883323 None:intergenic 15.0%
!!! TTATTTTAATGTATAGCAAT+AGG - chr6.2:77887099-77887118 None:intergenic 15.0%
!!! TTTGTCGTTTTTTTTAATAT+TGG - chr6.2:77886645-77886664 None:intergenic 15.0%
!!! TTTTTTAAGGAGTTTATTTT+GGG - chr6.2:77885059-77885078 None:intergenic 15.0%
!!! TTTTTTTTATTACAATTGCA+TGG + chr6.2:77883397-77883416 MS.gene05241:intron 15.0%
!! AAAAATGTATTGTAGGTTTA+TGG + chr6.2:77885542-77885561 MS.gene05241:intron 20.0%
!! AAAGTACAATAAAAGAATCT+AGG + chr6.2:77886244-77886263 MS.gene05241:intron 20.0%
!! AACGATATCTTTGTAATTTA+TGG + chr6.2:77887552-77887571 MS.gene05241:intron 20.0%
!! AAGTACAATAAAAGAATCTA+GGG + chr6.2:77886245-77886264 MS.gene05241:intron 20.0%
!! AATTAACAAAACCACAAAAA+TGG - chr6.2:77886134-77886153 None:intergenic 20.0%
!! ATAATTATTAACTAGCTAGT+AGG + chr6.2:77886722-77886741 MS.gene05241:intron 20.0%
!! GTTTAATCCAATAAAATCAA+AGG - chr6.2:77885667-77885686 None:intergenic 20.0%
!! GTTTATACTCAAATTTAGAT+AGG + chr6.2:77887222-77887241 MS.gene05241:intron 20.0%
!! TAATCAAATATCATGAAGTT+AGG + chr6.2:77884199-77884218 MS.gene05241:intron 20.0%
!! TACACAAAGTAAAGAAAATA+AGG - chr6.2:77885207-77885226 None:intergenic 20.0%
!! TATAAACTAATGCTTAACTT+TGG - chr6.2:77887209-77887228 None:intergenic 20.0%
!! TCATGATATTTGATTATCTT+TGG - chr6.2:77884195-77884214 None:intergenic 20.0%
!! TGAAGAAATACATATAGTAT+TGG - chr6.2:77885155-77885174 None:intergenic 20.0%
!! TGAGTTTCACATATAATTTA+TGG - chr6.2:77885371-77885390 None:intergenic 20.0%
!!! AACATTAACCACTTATTTTA+TGG - chr6.2:77886008-77886027 None:intergenic 20.0%
!!! AAGACATTAAACTCTTTTAA+AGG + chr6.2:77885414-77885433 MS.gene05241:intron 20.0%
!!! ACATTAACCACTTATTTTAT+GGG - chr6.2:77886007-77886026 None:intergenic 20.0%
!!! AGCATTTTCCATTAATAAAT+TGG + chr6.2:77883654-77883673 MS.gene05241:intron 20.0%
!!! AGTTACATTATTTTATGTTG+AGG - chr6.2:77885445-77885464 None:intergenic 20.0%
!!! GAACTTTGTTTTAAAGAATT+TGG + chr6.2:77884282-77884301 MS.gene05241:CDS 20.0%
!!! GTATATGTTTTATGTTTTCA+TGG + chr6.2:77886050-77886069 MS.gene05241:intron 20.0%
!!! GTTAATGTTTTAAGTTTTGA+TGG + chr6.2:77886019-77886038 MS.gene05241:intron 20.0%
!!! TCTTCAATGGTTATTTTTTA+AGG - chr6.2:77885072-77885091 None:intergenic 20.0%
!!! TCTTTCAATCTATTTCTTTA+AGG + chr6.2:77887181-77887200 MS.gene05241:intron 20.0%
!!! TTTTGCAAGTACAAAAATAA+TGG - chr6.2:77886227-77886246 None:intergenic 20.0%
! AAATGAAGAAGAAGTTCATA+TGG - chr6.2:77884022-77884041 None:intergenic 25.0%
! AACATGCTCCAATTTATTAA+TGG - chr6.2:77883665-77883684 None:intergenic 25.0%
! AAGATAAAGGACAAAAGTAA+TGG + chr6.2:77882891-77882910 MS.gene05241:CDS 25.0%
! AATAACAAAAACAATGATGC+TGG + chr6.2:77883074-77883093 MS.gene05241:intron 25.0%
! AATCGACAAATTTAGTATGA+AGG + chr6.2:77882610-77882629 MS.gene05241:intron 25.0%
! ACTTGATATGTAGAAAACTT+TGG - chr6.2:77885627-77885646 None:intergenic 25.0%
! AGACATTTCTGATATAATGT+AGG + chr6.2:77883107-77883126 MS.gene05241:intron 25.0%
! AGATTGAAAGAAAAACTAGT+TGG - chr6.2:77887172-77887191 None:intergenic 25.0%
! AGTTAAGGAACAAAATTTGT+TGG - chr6.2:77882863-77882882 None:intergenic 25.0%
! ATAATTATGTGAGTTAGATC+CGG - chr6.2:77882777-77882796 None:intergenic 25.0%
! ATAGTGTTTAGATATAGAGA+CGG + chr6.2:77887325-77887344 MS.gene05241:intron 25.0%
! ATGGTTATCAATTTATCCAA+AGG + chr6.2:77887063-77887082 MS.gene05241:CDS 25.0%
! ATTCCTTTATTAATTGCAGA+AGG + chr6.2:77883916-77883935 MS.gene05241:intron 25.0%
! GATGTGAATTACACTATATT+AGG - chr6.2:77884164-77884183 None:intergenic 25.0%
! TAAAAAAGAGGAAAAATACC+TGG - chr6.2:77882694-77882713 None:intergenic 25.0%
! TAACTTTACAGGTAAGATAA+AGG + chr6.2:77882878-77882897 MS.gene05241:intron 25.0%
! TACTTCGTAGATTACAATAA+TGG + chr6.2:77887722-77887741 MS.gene05241:CDS 25.0%
! TGGTTATCAATTTATCCAAA+GGG + chr6.2:77887064-77887083 MS.gene05241:CDS 25.0%
! TGTGAATTTATATATAGGCA+TGG + chr6.2:77887381-77887400 MS.gene05241:intron 25.0%
! TTATCTTACCTGTAAAGTTA+AGG - chr6.2:77882878-77882897 None:intergenic 25.0%
! TTCCAAAAATAAAACCTTGT+GGG - chr6.2:77882419-77882438 None:intergenic 25.0%
! TTGATCTATATCACTGAAAA+TGG + chr6.2:77887133-77887152 MS.gene05241:CDS 25.0%
! TTGATTATCTTTGGTCATAT+GGG - chr6.2:77884186-77884205 None:intergenic 25.0%
! TTTCCTTCTGCAATTAATAA+AGG - chr6.2:77883922-77883941 None:intergenic 25.0%
! TTTGATTATCTTTGGTCATA+TGG - chr6.2:77884187-77884206 None:intergenic 25.0%
!! AAAGAATAGCCTTAATTAAG+TGG - chr6.2:77885113-77885132 None:intergenic 25.0%
!! AATTTATAGGGTGTCTAATA+TGG - chr6.2:77883873-77883892 None:intergenic 25.0%
!! AATTTTTATGCTAACCACTT+TGG - chr6.2:77884833-77884852 None:intergenic 25.0%
!! ACTATTTTATTAGCTGCAAA+TGG - chr6.2:77887310-77887329 None:intergenic 25.0%
!! ATTTTGTTCCTTAACTTTAC+AGG + chr6.2:77882867-77882886 MS.gene05241:intron 25.0%
!! TAAAAATTGTTTCTTAGTCC+TGG - chr6.2:77883223-77883242 None:intergenic 25.0%
!! TAAGGTATCAATAGTGAATA+TGG - chr6.2:77885189-77885208 None:intergenic 25.0%
!! TTAATTTTCCAATCCATTGA+AGG + chr6.2:77884796-77884815 MS.gene05241:intron 25.0%
!! TTGTAACTGTTTTATGTTGT+AGG - chr6.2:77887793-77887812 None:intergenic 25.0%
!! TTTATGTTTTCATGGTTAGT+GGG + chr6.2:77886058-77886077 MS.gene05241:intron 25.0%
!! TTTTATGTTTTCATGGTTAG+TGG + chr6.2:77886057-77886076 MS.gene05241:intron 25.0%
!! TTTTCAGTGATATAGATCAA+CGG - chr6.2:77887133-77887152 None:intergenic 25.0%
!!! ACATTTTTGGATATCTTTTG+AGG - chr6.2:77887748-77887767 None:intergenic 25.0%
!!! CCTTGAGAATTTTTTTGAAT+CGG + chr6.2:77886288-77886307 MS.gene05241:intron 25.0%
!!! GTTAATATCATCCATTTTTG+TGG + chr6.2:77886120-77886139 MS.gene05241:intron 25.0%
!!! TTAAGTTTTGATGGTTAGTA+GGG + chr6.2:77886028-77886047 MS.gene05241:intron 25.0%
!!! TTTAAGTTTTGATGGTTAGT+AGG + chr6.2:77886027-77886046 MS.gene05241:intron 25.0%
AAATATGTATGAGTTGCATC+AGG + chr6.2:77884991-77885010 MS.gene05241:intron 30.0%
AATGATGAAGGACATCAATA+TGG + chr6.2:77883140-77883159 MS.gene05241:CDS 30.0%
ACACACAAGTTATAACATCA+TGG - chr6.2:77882977-77882996 None:intergenic 30.0%
ACTTTCACACATAATTATCC+AGG + chr6.2:77882673-77882692 MS.gene05241:CDS 30.0%
ATCAAGTAAAGCTTGTAAGA+GGG + chr6.2:77885640-77885659 MS.gene05241:CDS 30.0%
ATCAATTGCTATGTCAATGT+AGG + chr6.2:77884062-77884081 MS.gene05241:intron 30.0%
ATTAAACTCCTTCAATGGAT+TGG - chr6.2:77884807-77884826 None:intergenic 30.0%
ATTATTAACTAGCTAGTAGG+AGG + chr6.2:77886725-77886744 MS.gene05241:intron 30.0%
CAAACTCTTGAAGAAGAATA+TGG + chr6.2:77884125-77884144 MS.gene05241:CDS 30.0%
CAAAGGATTGATTACTATCA+TGG + chr6.2:77887454-77887473 MS.gene05241:CDS 30.0%
CATGGTAACATATTAGATCT+TGG - chr6.2:77882959-77882978 None:intergenic 30.0%
CCGATTCAAAAAAATTCTCA+AGG - chr6.2:77886291-77886310 None:intergenic 30.0%
CTCTAACTATGATTATATCC+AGG + chr6.2:77884238-77884257 MS.gene05241:intron 30.0%
CTGGATATAATCATAGTTAG+AGG - chr6.2:77884240-77884259 None:intergenic 30.0%
GTGAGTAATAAGTCTTACAT+TGG + chr6.2:77885940-77885959 MS.gene05241:intron 30.0%
GTTCCAAAAATAAAACCTTG+TGG - chr6.2:77882420-77882439 None:intergenic 30.0%
TACACCATTAACCACAAAAA+TGG - chr6.2:77886188-77886207 None:intergenic 30.0%
TATCAAGTAAAGCTTGTAAG+AGG + chr6.2:77885639-77885658 MS.gene05241:CDS 30.0%
TATTCTTCTTCAAGAGTTTG+AGG - chr6.2:77884125-77884144 None:intergenic 30.0%
TCTTACATTGGATAGAAAAG+TGG + chr6.2:77885952-77885971 MS.gene05241:intron 30.0%
TGATCAATACCATCGTTATA+AGG + chr6.2:77882926-77882945 MS.gene05241:CDS 30.0%
TGTCTACAAAACTAAGTATC+AGG + chr6.2:77884494-77884513 MS.gene05241:CDS 30.0%
TGTTGTGATTCTTAACTCTT+TGG + chr6.2:77882329-77882348 MS.gene05241:CDS 30.0%
TTAATTGCAGAAGGAAAGAT+TGG + chr6.2:77883925-77883944 MS.gene05241:intron 30.0%
TTTATGGATCCATTGACAAT+AGG + chr6.2:77885558-77885577 MS.gene05241:CDS 30.0%
TTTCAGTGATATAGATCAAC+GGG - chr6.2:77887132-77887151 None:intergenic 30.0%
! CATTGATTGACAACTTTGAA+TGG + chr6.2:77887669-77887688 MS.gene05241:CDS 30.0%
! TATCCAAATTTTACAAGGGA+TGG + chr6.2:77887617-77887636 MS.gene05241:intron 30.0%
! TCCAATTTTGTATCATAGAG+TGG - chr6.2:77885286-77885305 None:intergenic 30.0%
! TTATGTTTTCATGGTTAGTG+GGG + chr6.2:77886059-77886078 MS.gene05241:intron 30.0%
!! ATTGACTTCTAGAAGCTTTT+AGG + chr6.2:77886473-77886492 MS.gene05241:intron 30.0%
!! TCATCCATTTTTGTGGTTAA+TGG + chr6.2:77886181-77886200 MS.gene05241:intron 30.0%
!!! AGAATTTTTCAAGACACATG+TGG - chr6.2:77883611-77883630 None:intergenic 30.0%
!!! GTGCAAAGTTTTTAGTTTGA+GGG - chr6.2:77887517-77887536 None:intergenic 30.0%
!!! TTCCCACAAGGTTTTATTTT+TGG + chr6.2:77882414-77882433 MS.gene05241:CDS 30.0%
!!! TTTTTTACAGACAATCGCAA+TGG + chr6.2:77886867-77886886 MS.gene05241:intron 30.0%
AACATCTTCATCTGCATATC+AGG + chr6.2:77882437-77882456 MS.gene05241:CDS 35.0%
AACATTAATGTGTCAGTGGA+TGG + chr6.2:77885258-77885277 MS.gene05241:CDS 35.0%
AACCATTGAAGATGCTCTAA+GGG + chr6.2:77885080-77885099 MS.gene05241:intron 35.0%
AATACTTCCAAGTAAGCAAC+GGG + chr6.2:77883194-77883213 MS.gene05241:intron 35.0%
AATAGCTAGCCAAAGCATAA+AGG - chr6.2:77884640-77884659 None:intergenic 35.0%
AATAGGTCATGAATTCCCTT+TGG - chr6.2:77887082-77887101 None:intergenic 35.0%
AATCCTTTGTGTGTCTTCAA+GGG - chr6.2:77887443-77887462 None:intergenic 35.0%
AATCGAAGTAATTTCCCACA+AGG + chr6.2:77882402-77882421 MS.gene05241:CDS 35.0%
AATCGCAATGGAATACCTAT+TGG + chr6.2:77886879-77886898 MS.gene05241:CDS 35.0%
ACTCTTGAAGAAGAATATGG+TGG + chr6.2:77884128-77884147 MS.gene05241:CDS 35.0%
AGCTAGTAGGAGGAAAATTT+GGG + chr6.2:77886735-77886754 MS.gene05241:intron 35.0%
AGGGTTATAAATACCACTGT+TGG - chr6.2:77886395-77886414 None:intergenic 35.0%
AGTTCATATGGTATTACCCT+TGG - chr6.2:77884010-77884029 None:intergenic 35.0%
ATAGCTAGCCAAAGCATAAA+GGG - chr6.2:77884639-77884658 None:intergenic 35.0%
ATCCAAAAATGTCAGCCATT+TGG + chr6.2:77887756-77887775 MS.gene05241:CDS 35.0%
CAAAAACAAATGGCAAGGTA+GGG + chr6.2:77884590-77884609 MS.gene05241:intron 35.0%
CAATGAAAAAGGGTCACAAA+GGG - chr6.2:77884095-77884114 None:intergenic 35.0%
CCATCCAAACATGAAATCAA+TGG - chr6.2:77885329-77885348 None:intergenic 35.0%
CTCAACCTTGCAAAAACAAA+TGG + chr6.2:77884580-77884599 MS.gene05241:intron 35.0%
GAAATGTTAATCGATACCTC+CGG - chr6.2:77885516-77885535 None:intergenic 35.0%
GAACACTTTATAAGTGAGAG+AGG + chr6.2:77885980-77885999 MS.gene05241:intron 35.0%
GAATACTTCCAAGTAAGCAA+CGG + chr6.2:77883193-77883212 MS.gene05241:intron 35.0%
GCACTAAATGTTCTTCTTTC+TGG + chr6.2:77882303-77882322 MS.gene05241:CDS 35.0%
GCCACTCTATGATACAAAAT+TGG + chr6.2:77885282-77885301 MS.gene05241:CDS 35.0%
GGAAGATGTTGAAATGATGA+AGG + chr6.2:77883128-77883147 MS.gene05241:intron 35.0%
GGATAACATTAATGTGTCAG+TGG + chr6.2:77885254-77885273 MS.gene05241:CDS 35.0%
GGGTTATAAATACCACTGTT+GGG - chr6.2:77886394-77886413 None:intergenic 35.0%
TAACCATTGAAGATGCTCTA+AGG + chr6.2:77885079-77885098 MS.gene05241:intron 35.0%
TAACGCGAAAACCTTTATCA+CGG - chr6.2:77883703-77883722 None:intergenic 35.0%
TACATTGGATAGAAAAGTGG+AGG + chr6.2:77885955-77885974 MS.gene05241:intron 35.0%
TAGCTAGTAGGAGGAAAATT+TGG + chr6.2:77886734-77886753 MS.gene05241:intron 35.0%
TAGGAAATCCCTAAACCAAA+TGG - chr6.2:77887774-77887793 None:intergenic 35.0%
TGCTTACATACAGGAACATA+GGG - chr6.2:77887287-77887306 None:intergenic 35.0%
TGGGAAATTACTTCGATTGA+GGG - chr6.2:77882400-77882419 None:intergenic 35.0%
TGTTTAGATATAGAGACGGA+GGG + chr6.2:77887329-77887348 MS.gene05241:intron 35.0%
TTATTATGAGCCGCGATATA+GGG - chr6.2:77884447-77884466 None:intergenic 35.0%
TTGGACTTCGTTGACATAAA+AGG + chr6.2:77887009-77887028 MS.gene05241:intron 35.0%
TTGGAGATAGAGTAAAGCAT+TGG + chr6.2:77884301-77884320 MS.gene05241:CDS 35.0%
TTTATTATGAGCCGCGATAT+AGG - chr6.2:77884448-77884467 None:intergenic 35.0%
TTTCATTTATGATGAGCCAC+CGG + chr6.2:77882755-77882774 MS.gene05241:intron 35.0%
TTTGGGTGAACATATGAGTA+CGG + chr6.2:77886752-77886771 MS.gene05241:intron 35.0%
! AAATGTCAGCCATTTGGTTT+AGG + chr6.2:77887762-77887781 MS.gene05241:CDS 35.0%
! AACCAAATGGCTGACATTTT+TGG - chr6.2:77887761-77887780 None:intergenic 35.0%
! AATAGCCTTAATTAAGTGGC+TGG - chr6.2:77885109-77885128 None:intergenic 35.0%
! AATGTCAGCCATTTGGTTTA+GGG + chr6.2:77887763-77887782 MS.gene05241:CDS 35.0%
! ACTTAAAGCACAACTTGCTT+AGG - chr6.2:77886447-77886466 None:intergenic 35.0%
! CGTATAGATTTTCCATCTCT+TGG + chr6.2:77883166-77883185 MS.gene05241:CDS 35.0%
! CTTAAAGCACAACTTGCTTA+GGG - chr6.2:77886446-77886465 None:intergenic 35.0%
! GCTAGCATTTATTGATTGCA+TGG + chr6.2:77883368-77883387 MS.gene05241:intron 35.0%
! GGTATTGAACCTTATAACGA+TGG - chr6.2:77882938-77882957 None:intergenic 35.0%
! TCTTGCTGTGTGTTAAACTA+AGG - chr6.2:77885833-77885852 None:intergenic 35.0%
!! AGAGCCATTGATTTCATGTT+TGG + chr6.2:77885322-77885341 MS.gene05241:CDS 35.0%
!! AGAGGGTCCTTTGATTTTAT+TGG + chr6.2:77885657-77885676 MS.gene05241:CDS 35.0%
!! CCATTGATTTCATGTTTGGA+TGG + chr6.2:77885326-77885345 MS.gene05241:CDS 35.0%
!! CTTTGTGACCCTTTTTCATT+GGG + chr6.2:77884094-77884113 MS.gene05241:CDS 35.0%
!! GAGGGATTTGCTAATATCAT+TGG - chr6.2:77882382-77882401 None:intergenic 35.0%
!! GTGAAAGTATCCCATATACT+TGG - chr6.2:77882661-77882680 None:intergenic 35.0%
!! TTGCTTACTTGGAAGTATTC+TGG - chr6.2:77883193-77883212 None:intergenic 35.0%
!!! GGTGCAAAGTTTTTAGTTTG+AGG - chr6.2:77887518-77887537 None:intergenic 35.0%
AAGCAAAAACAAGTCCACAG+AGG - chr6.2:77886415-77886434 None:intergenic 40.0%
AAGTATTCTGGACCAAGAGA+TGG - chr6.2:77883181-77883200 None:intergenic 40.0%
AAGTGAATCTGTGATGTAGC+TGG - chr6.2:77885742-77885761 None:intergenic 40.0%
AATACGTCCCCTTTATGCTT+TGG + chr6.2:77884628-77884647 MS.gene05241:intron 40.0%
AATTATCACGCACATACCGT+TGG - chr6.2:77886906-77886925 None:intergenic 40.0%
AGCAAAAACAAGTCCACAGA+GGG - chr6.2:77886414-77886433 None:intergenic 40.0%
AGCTGTGTCAAGAAATGCTA+GGG + chr6.2:77883249-77883268 MS.gene05241:intron 40.0%
AGGAAGGTCCCAATGAAAAA+GGG - chr6.2:77884105-77884124 None:intergenic 40.0%
AGGAGTTTAATGTGCCAAAG+TGG + chr6.2:77884816-77884835 MS.gene05241:intron 40.0%
AGTGAATCTGTGATGTAGCT+GGG - chr6.2:77885741-77885760 None:intergenic 40.0%
ATTATCACGCACATACCGTT+GGG - chr6.2:77886905-77886924 None:intergenic 40.0%
ATTATGTGAGTTAGATCCGG+TGG - chr6.2:77882774-77882793 None:intergenic 40.0%
ATTGCAGAAGGAAAGATTGG+TGG + chr6.2:77883928-77883947 MS.gene05241:intron 40.0%
CAATCCTTTGTGTGTCTTCA+AGG - chr6.2:77887444-77887463 None:intergenic 40.0%
CCAATGAAAAAGGGTCACAA+AGG - chr6.2:77884096-77884115 None:intergenic 40.0%
CCTTGCAAAAACAAATGGCA+AGG + chr6.2:77884585-77884604 MS.gene05241:intron 40.0%
CTTATTACTCACACTTGCAG+AGG - chr6.2:77885932-77885951 None:intergenic 40.0%
CTTCTTCAAGAGTTTGAGGA+AGG - chr6.2:77884121-77884140 None:intergenic 40.0%
GAGAGGACCCATAAAATAAG+TGG + chr6.2:77885997-77886016 MS.gene05241:intron 40.0%
GCAAAAACAAATGGCAAGGT+AGG + chr6.2:77884589-77884608 MS.gene05241:intron 40.0%
GCACCATCCCTTGTAAAATT+TGG - chr6.2:77887623-77887642 None:intergenic 40.0%
GGAACCTATATTACACATGC+AGG + chr6.2:77887030-77887049 MS.gene05241:intron 40.0%
GGATCACATTGAATGAACCA+TGG + chr6.2:77884322-77884341 MS.gene05241:CDS 40.0%
GGCACATTAAACTCCTTCAA+TGG - chr6.2:77884812-77884831 None:intergenic 40.0%
GGGTGCATTAGTTGCATAAT+GGG - chr6.2:77885700-77885719 None:intergenic 40.0%
GTGCTTACATACAGGAACAT+AGG - chr6.2:77887288-77887307 None:intergenic 40.0%
GTGGGAAATTACTTCGATTG+AGG - chr6.2:77882401-77882420 None:intergenic 40.0%
GTGGTATTTATAACCCTCTG+TGG + chr6.2:77886398-77886417 MS.gene05241:intron 40.0%
GTGTTTAGATATAGAGACGG+AGG + chr6.2:77887328-77887347 MS.gene05241:intron 40.0%
GTTGCGTCTTTCATGTGTTT+CGG - chr6.2:77886330-77886349 None:intergenic 40.0%
TAACCTCATCAATGAGCTTC+TGG + chr6.2:77883984-77884003 MS.gene05241:CDS 40.0%
TAGCTAGCCAAAGCATAAAG+GGG - chr6.2:77884638-77884657 None:intergenic 40.0%
TGCAAATGGTGCTTACATAC+AGG - chr6.2:77887296-77887315 None:intergenic 40.0%
TGGCAAAACTTGAATTGCAC+CGG + chr6.2:77884402-77884421 MS.gene05241:CDS 40.0%
TGGCAAAGGACCAAGTATAT+GGG + chr6.2:77882648-77882667 MS.gene05241:CDS 40.0%
TGTACACAGACATCTCAACA+GGG + chr6.2:77885223-77885242 MS.gene05241:intron 40.0%
TGTGGCTGAAAAATAGGAAG+TGG + chr6.2:77883558-77883577 MS.gene05241:intron 40.0%
TTGGGTGAACATATGAGTAC+GGG + chr6.2:77886753-77886772 MS.gene05241:intron 40.0%
! AACCCTTAGAGCATCTTCAA+TGG - chr6.2:77885085-77885104 None:intergenic 40.0%
! ATAGTCTTGAAAGTCGTTCC+TGG - chr6.2:77884259-77884278 None:intergenic 40.0%
! GACAACTTTGAATGGACTTC+AGG + chr6.2:77887677-77887696 MS.gene05241:CDS 40.0%
! GATTGGTGGAGGTGTAAATA+AGG + chr6.2:77883942-77883961 MS.gene05241:CDS 40.0%
!! AAGCTTTTAGGAGACTGTTG+AGG + chr6.2:77886485-77886504 MS.gene05241:intron 40.0%
!! CCTTTGTGACCCTTTTTCAT+TGG + chr6.2:77884093-77884112 MS.gene05241:CDS 40.0%
!! GTGCAATTCAAGTTTTGCCA+GGG - chr6.2:77884402-77884421 None:intergenic 40.0%
!!! CCTTGCCATTTGTTTTTGCA+AGG - chr6.2:77884588-77884607 None:intergenic 40.0%
AACACATGAAAGACGCAACG+AGG + chr6.2:77886331-77886350 MS.gene05241:intron 45.0%
AAGCCCTTGAAGACACACAA+AGG + chr6.2:77887437-77887456 MS.gene05241:CDS 45.0%
ACATCTCAACAGGGCAAGAT+AGG + chr6.2:77885232-77885251 MS.gene05241:CDS 45.0%
ACATGCAGGCAGCTTCAAAA+TGG + chr6.2:77887044-77887063 MS.gene05241:intron 45.0%
ATCAATGAGCTTCTGGCCAA+GGG + chr6.2:77883991-77884010 MS.gene05241:CDS 45.0%
ATCTGTGATGTAGCTGGGTT+TGG - chr6.2:77885736-77885755 None:intergenic 45.0%
ATGTGAACGGGTACTTTGCA+TGG + chr6.2:77887645-77887664 MS.gene05241:CDS 45.0%
CAAAACTTGAATTGCACCGG+TGG + chr6.2:77884405-77884424 MS.gene05241:CDS 45.0%
CACTGTTGGGATCATTCTCA+AGG - chr6.2:77886381-77886400 None:intergenic 45.0%
CAGCTGTGTCAAGAAATGCT+AGG + chr6.2:77883248-77883267 MS.gene05241:intron 45.0%
CATCTCAACAGGGCAAGATA+GGG + chr6.2:77885233-77885252 MS.gene05241:CDS 45.0%
CCATTTGCCACAATTCAAGG+AGG + chr6.2:77883535-77883554 MS.gene05241:intron 45.0%
CCTCCTTGAATTGTGGCAAA+TGG - chr6.2:77883538-77883557 None:intergenic 45.0%
CGGGTGCATTAGTTGCATAA+TGG - chr6.2:77885701-77885720 None:intergenic 45.0%
CTAGCATTTCTTGACACAGC+TGG - chr6.2:77883250-77883269 None:intergenic 45.0%
CTTCAAGGGCTTTCTCAAGA+GGG - chr6.2:77887429-77887448 None:intergenic 45.0%
CTTGAGAATGATCCCAACAG+TGG + chr6.2:77886379-77886398 MS.gene05241:intron 45.0%
GAGGAAGGTCCCAATGAAAA+AGG - chr6.2:77884106-77884125 None:intergenic 45.0%
GCACCATTTGCCACAATTCA+AGG + chr6.2:77883532-77883551 MS.gene05241:intron 45.0%
GCTGCCTGCATGTGTAATAT+AGG - chr6.2:77887037-77887056 None:intergenic 45.0%
GGCAAATGGTGCATTGTGAT+TGG - chr6.2:77883524-77883543 None:intergenic 45.0%
GGGTAGTCTCCTATTGTCAA+TGG - chr6.2:77885570-77885589 None:intergenic 45.0%
GGTTGCCAGCCACTTAATTA+AGG + chr6.2:77885101-77885120 MS.gene05241:intron 45.0%
GTGGCAAAGGACCAAGTATA+TGG + chr6.2:77882647-77882666 MS.gene05241:CDS 45.0%
GTGTACACAGACATCTCAAC+AGG + chr6.2:77885222-77885241 MS.gene05241:intron 45.0%
TCAGGCTACACTTCAAGGTT+TGG + chr6.2:77887695-77887714 MS.gene05241:CDS 45.0%
TCCATCAGCATAAGCATGCT+TGG - chr6.2:77884355-77884374 None:intergenic 45.0%
TCTTCAAGGGCTTTCTCAAG+AGG - chr6.2:77887430-77887449 None:intergenic 45.0%
TGGAATACCTATTGGCCCAA+CGG + chr6.2:77886887-77886906 MS.gene05241:CDS 45.0%
TGTTTCCTTAACCAGTGCTC+CGG + chr6.2:77885494-77885513 MS.gene05241:intron 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG + chr6.2:77883552-77883571 MS.gene05241:intron 45.0%
! GGGTTTGGCTTCACTTAACT+CGG - chr6.2:77885721-77885740 None:intergenic 45.0%
! GGTGGAGGTGTAAATAAGGA+AGG + chr6.2:77883946-77883965 MS.gene05241:CDS 45.0%
! GGTTTGGCTTCACTTAACTC+GGG - chr6.2:77885720-77885739 None:intergenic 45.0%
! TATGAAGGTGCAGCCAATGT+TGG + chr6.2:77882625-77882644 MS.gene05241:CDS 45.0%
!! CTTTTAGGAGACTGTTGAGG+CGG + chr6.2:77886488-77886507 MS.gene05241:intron 45.0%
!! GGTGCAATTCAAGTTTTGCC+AGG - chr6.2:77884403-77884422 None:intergenic 45.0%
!!! TTATATATAACTTTTTTTAA+GGG - chr6.2:77883802-77883821 None:intergenic 5.0%
!!! TTTATATATAACTTTTTTTA+AGG - chr6.2:77883803-77883822 None:intergenic 5.0%
ACATGAAAGACGCAACGAGG+CGG + chr6.2:77886334-77886353 MS.gene05241:intron 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr6.2:77883545-77883564 None:intergenic 50.0%
AGGGATGGTGCGAATGTGAA+CGG + chr6.2:77887632-77887651 MS.gene05241:intron 50.0%
ATCAGGATGACGTGGCATTG+TGG + chr6.2:77885008-77885027 MS.gene05241:intron 50.0%
CAAGTAAGCAACGGGAAACC+AGG + chr6.2:77883202-77883221 MS.gene05241:intron 50.0%
CATCAATGAGCTTCTGGCCA+AGG + chr6.2:77883990-77884009 MS.gene05241:CDS 50.0%
CTGGTTTCCCGTTGCTTACT+TGG - chr6.2:77883204-77883223 None:intergenic 50.0%
GCAGAAGGAAAGATTGGTGG+AGG + chr6.2:77883931-77883950 MS.gene05241:intron 50.0%
GCCAAGCATGCTTATGCTGA+TGG + chr6.2:77884351-77884370 MS.gene05241:CDS 50.0%
GCTGATGGAAAGTTAGCACC+TGG + chr6.2:77884366-77884385 MS.gene05241:CDS 50.0%
GGACTTCAGGCTACACTTCA+AGG + chr6.2:77887690-77887709 MS.gene05241:CDS 50.0%
TCAGGATGACGTGGCATTGT+GGG + chr6.2:77885009-77885028 MS.gene05241:intron 50.0%
TCGCGAGACAACCGTGATAA+AGG + chr6.2:77883689-77883708 MS.gene05241:intron 50.0%
TGAGTTGCATCAGGATGACG+TGG + chr6.2:77885000-77885019 MS.gene05241:intron 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr6.2:77883540-77883559 MS.gene05241:intron 50.0%
TGGCCAGAAGCTCATTGATG+AGG - chr6.2:77883990-77884009 None:intergenic 50.0%
TGGTCCTTTGCCACCAACAT+TGG - chr6.2:77882641-77882660 None:intergenic 50.0%
! GCTTTCTCAAGAGGGAGTGT+TGG - chr6.2:77887421-77887440 None:intergenic 50.0%
! TGGTAATCGACTCCCTACCA+AGG - chr6.2:77885607-77885626 None:intergenic 50.0%
AATCGATACCTCCGGAGCAC+TGG - chr6.2:77885508-77885527 None:intergenic 55.0%
AGCCGCGATATAGGGTTCAG+TGG - chr6.2:77884439-77884458 None:intergenic 55.0%
CGCCACTGAACCCTATATCG+CGG + chr6.2:77884434-77884453 MS.gene05241:CDS 55.0%
CGCGATATAGGGTTCAGTGG+CGG - chr6.2:77884436-77884455 None:intergenic 55.0%
GAGACTACCCTAGCTCCATG+CGG + chr6.2:77885580-77885599 MS.gene05241:CDS 55.0%
GCACATACCGTTGGGCCAAT+AGG - chr6.2:77886897-77886916 None:intergenic 55.0%
GCATGCTTGGCAAAGCTCCA+TGG - chr6.2:77884342-77884361 None:intergenic 55.0%
GGGATGGTGCGAATGTGAAC+GGG + chr6.2:77887633-77887652 MS.gene05241:intron 55.0%
TTCCTTAACCAGTGCTCCGG+AGG + chr6.2:77885497-77885516 MS.gene05241:intron 55.0%
! GAAGGTGCAGCCAATGTTGG+TGG + chr6.2:77882628-77882647 MS.gene05241:CDS 55.0%
! TTCAGTGGCGGAATCTCCAC+CGG - chr6.2:77884424-77884443 None:intergenic 55.0%
!! GCAGCCAATGTTGGTGGCAA+AGG + chr6.2:77882634-77882653 MS.gene05241:CDS 55.0%
!! TACCTCCGGAGCACTGGTTA+AGG - chr6.2:77885502-77885521 None:intergenic 55.0%
ACCAAGGACCGCATGGAGCT+AGG - chr6.2:77885591-77885610 None:intergenic 60.0%
ACTCCCTACCAAGGACCGCA+TGG - chr6.2:77885598-77885617 None:intergenic 60.0%
AGCTCCATGCGGTCCTTGGT+AGG + chr6.2:77885591-77885610 MS.gene05241:CDS 60.0%
CACCTGGTCGATGTTCACCC+TGG + chr6.2:77884382-77884401 MS.gene05241:CDS 60.0%
CCAAGGACCGCATGGAGCTA+GGG - chr6.2:77885590-77885609 None:intergenic 60.0%
GCTCCATGCGGTCCTTGGTA+GGG + chr6.2:77885592-77885611 MS.gene05241:CDS 60.0%
GGCGTCTAGGCTCTTCTGGA+GGG + chr6.2:77886538-77886557 MS.gene05241:intron 60.0%
TGCCAGGGTGAACATCGACC+AGG - chr6.2:77884387-77884406 None:intergenic 60.0%
! GGCCTAGGCGCTCTCTAGAA+GGG - chr6.2:77886572-77886591 None:intergenic 60.0%
!! TAGAGAGCGCCTAGGCCCTT+AGG + chr6.2:77886575-77886594 MS.gene05241:intron 60.0%
AGACTGTTGAGGCGGCGCCT+AGG + chr6.2:77886496-77886515 MS.gene05241:intron 65.0%
CCCTAGCTCCATGCGGTCCT+TGG + chr6.2:77885587-77885606 MS.gene05241:CDS 65.0%
CCTAGGCCTCAAGGGCCTTC+GGG + chr6.2:77886513-77886532 MS.gene05241:intron 65.0%
GCCTAGGCCTCAAGGGCCTT+CGG + chr6.2:77886512-77886531 MS.gene05241:intron 65.0%
GGGCCTAGGCGCTCTCTAGA+AGG - chr6.2:77886573-77886592 None:intergenic 65.0%
GGGCGTCTAGGCTCTTCTGG+AGG + chr6.2:77886537-77886556 MS.gene05241:intron 65.0%
! GGCGCTCTCTAGAAGGGCCT+AGG - chr6.2:77886566-77886585 None:intergenic 65.0%
!! GGAGGGCGTCTAGGCTCTTC+TGG + chr6.2:77886534-77886553 MS.gene05241:intron 65.0%
!! GGCCCTTCTAGAGAGCGCCT+AGG + chr6.2:77886567-77886586 MS.gene05241:intron 65.0%
AGGCCTCAAGGGCCTTCGGG+AGG + chr6.2:77886516-77886535 MS.gene05241:intron 70.0%
AGGCGGCGCCTAGGCCTCAA+GGG + chr6.2:77886505-77886524 MS.gene05241:intron 70.0%
CCCGAAGGCCCTTGAGGCCT+AGG - chr6.2:77886516-77886535 None:intergenic 70.0%
GAGCCTAGACGCCCTCCCGA+AGG - chr6.2:77886531-77886550 None:intergenic 70.0%
GGCCTCAAGGGCCTTCGGGA+GGG + chr6.2:77886517-77886536 MS.gene05241:intron 70.0%
!! GGCTCTTCTGGAGGGCGCCT+AGG + chr6.2:77886546-77886565 MS.gene05241:intron 70.0%
CGCCCTCCCGAAGGCCCTTG+AGG - chr6.2:77886522-77886541 None:intergenic 75.0%
GAGGCGGCGCCTAGGCCTCA+AGG + chr6.2:77886504-77886523 MS.gene05241:intron 75.0%
!! GGGCCTTCGGGAGGGCGTCT+AGG + chr6.2:77886525-77886544 MS.gene05241:intron 75.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 77882300 77887829 77882300 ID=MS.gene05241
chr6.2 mRNA 77882300 77887829 77882300 ID=MS.gene05241.t1;Parent=MS.gene05241
chr6.2 exon 77882300 77882458 77882300 ID=MS.gene05241.t1.exon1;Parent=MS.gene05241.t1
chr6.2 CDS 77882300 77882458 77882300 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77882625 77882694 77882625 ID=MS.gene05241.t1.exon2;Parent=MS.gene05241.t1
chr6.2 CDS 77882625 77882694 77882625 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77882889 77882947 77882889 ID=MS.gene05241.t1.exon3;Parent=MS.gene05241.t1
chr6.2 CDS 77882889 77882947 77882889 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77883129 77883204 77883129 ID=MS.gene05241.t1.exon4;Parent=MS.gene05241.t1
chr6.2 CDS 77883129 77883204 77883129 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77883935 77884012 77883935 ID=MS.gene05241.t1.exon5;Parent=MS.gene05241.t1
chr6.2 CDS 77883935 77884012 77883935 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77884084 77884171 77884084 ID=MS.gene05241.t1.exon6;Parent=MS.gene05241.t1
chr6.2 CDS 77884084 77884171 77884084 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77884260 77884515 77884260 ID=MS.gene05241.t1.exon7;Parent=MS.gene05241.t1
chr6.2 CDS 77884260 77884515 77884260 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77885232 77885347 77885232 ID=MS.gene05241.t1.exon8;Parent=MS.gene05241.t1
chr6.2 CDS 77885232 77885347 77885232 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77885557 77885774 77885557 ID=MS.gene05241.t1.exon9;Parent=MS.gene05241.t1
chr6.2 CDS 77885557 77885774 77885557 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77886877 77886908 77886877 ID=MS.gene05241.t1.exon10;Parent=MS.gene05241.t1
chr6.2 CDS 77886877 77886908 77886877 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77887052 77887154 77887052 ID=MS.gene05241.t1.exon11;Parent=MS.gene05241.t1
chr6.2 CDS 77887052 77887154 77887052 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77887398 77887506 77887398 ID=MS.gene05241.t1.exon12;Parent=MS.gene05241.t1
chr6.2 CDS 77887398 77887506 77887398 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
chr6.2 exon 77887634 77887829 77887634 ID=MS.gene05241.t1.exon13;Parent=MS.gene05241.t1
chr6.2 CDS 77887634 77887829 77887634 ID=cds.MS.gene05241.t1;Parent=MS.gene05241.t1
Gene Sequence

>MS.gene05241

ATGGCACTAAATGTTCTTCTTTCTGGAATTGTTGTGATTCTTAACTCTTTGGCTATAATTGATGCTACAATATTGTTAACCAATGATATTAGCAAATCCCTCAATCGAAGTAATTTCCCACAAGGTTTTATTTTTGGAACATCTTCATCTGCATATCAGGTATTCCAAATATTTCAATATTCTTTTACTAGAAAGAGTCAAATCAATAAAAAAAAAAATGAAATTCATCTCTTATTTAGTGTTAGAAACATTATAAAAAGTCAACTATACATTTTCTATCTCTAATTTATGTTTCTACTGCTATTAATTTAATCGACAAATTTAGTATGAAGGTGCAGCCAATGTTGGTGGCAAAGGACCAAGTATATGGGATACTTTCACACATAATTATCCAGGTATTTTTCCTCTTTTTTATTTTTTGTTGATGAAGTCTTATGTTTTTTTTTTTTTTTTTTTTTCATTTATGATGAGCCACCGGATCTAACTCACATAATTATCCATTACTTTTTTCATTTATGTATTAATTCTACATTCATACTATGTATGTTTTGCTGAAAACACCAACAAATTTTGTTCCTTAACTTTACAGGTAAGATAAAGGACAAAAGTAATGGAGATATAGCTATTGATCAATACCATCGTTATAAGGTTCAATACCAAGATCTAATATGTTACCATGATGTTATAACTTGTGTGTTATAAATTCTCTAAAAAAAAAAAAAACTTGTGTTATTAAGATTATTATAATAATTGTTCAAAAAAAAGGATTATTATAATAACAAAAACAATGATGCTGGATCATAGTTAAGACATTTCTGATATAATGTAGGAAGATGTTGAAATGATGAAGGACATCAATATGGATGCGTATAGATTTTCCATCTCTTGGTCCAGAATACTTCCAAGTAAGCAACGGGAAACCAGGACTAAGAAACAATTTTTAAATGCCAGCTGTGTCAAGAAATGCTAGGGAAACATATTCTCGCTTGATGTAGCATTTTCCTAAAAAAAAAAGAAAATGCTACTTCAAGCGAGAATATGTTTCACGAGCATTTTCAGACATATATAGCTAGCATTTATTGATTGCATGGTTAATTTTTTTTTTATTACAATTGCATGGTTAATTAATTTTTTTTATTACAATTGCATGGTTAATTAATAAAGAGCAATGCTATATCTCTAGAAAAAAAACATCAAGAATTCTTCAAGAATAAAAAGCAACCAATCACAATGCACCATTTGCCACAATTCAAGGAGGTGTGGCTGAAAAATAGGAAGTGGACAAATAAATCATGCAATTAAAACTTGCCACATGTGTCTTGAAAAATTCTTGATGCTATTTTTCTAGATAAATAGCATTTTCCATTAATAAATTGGAGCATGTTTAATTCGCGAGACAACCGTGATAAAGGTTTTCGCGTTATTTAGCATTGCTCTTTTTTTTTTTTTTTTTTTTATGTATCACTATTAATATTAACTTAAGGTGTGTTTAATGTTTACCCTTAAAAAAAGTTATATATAAAGATGTATCCTTACTATTTTTAAAAAAAAGTTCATCTTTAAATCAAGTCCATATTAGACACCCTATAAATTTATAATATTAATTTACATGTTAAATTCCTTTATTAATTGCAGAAGGAAAGATTGGTGGAGGTGTAAATAAGGAAGGAATCAACTATTACAATAACCTCATCAATGAGCTTCTGGCCAAGGGTAATACCATATGAACTTCTTCTTCATTTAATGATTTTGTCTAAAATACATCAATTGCTATGTCAATGTAGGTCTTCAACCCTTTGTGACCCTTTTTCATTGGGACCTTCCTCAAACTCTTGAAGAAGAATATGGTGGATTTTTAAGTCCTAATATAGTGTAATTCACATCCCATATGACCAAAGATAATCAAATATCATGAAGTTAGGTATATAGTGTTTTTTCCTCTAACTATGATTATATCCAGGAACGACTTTCAAGACTATTCAGAACTTTGTTTTAAAGAATTTGGAGATAGAGTAAAGCATTGGATCACATTGAATGAACCATGGAGCTTTGCCAAGCATGCTTATGCTGATGGAAAGTTAGCACCTGGTCGATGTTCACCCTGGCAAAACTTGAATTGCACCGGTGGAGATTCCGCCACTGAACCCTATATCGCGGCTCATAATAAAATACTTGCTCATGCATCTGCTGTCAATGTCTACAAAACTAAGTATCAGGTTTGAATTTATTTTAATTAAATCAATTCTCGTACGTAGTGTATGTCTTAGATTTTGATGTCTACTCAACCTTGCAAAAACAAATGGCAAGGTAGGGTTTGTACTTTTCTCTAATACGTCCCCTTTATGCTTTGGCTAGCTATTGAGTTATGCGCTATATATGATAGTATATGATAGGTTTTCAAGTTTAGATTGACACGAAATCAATCAACATTACTAGTTTATATAGTAAGAGCATGTCGAGTGTCATAGATATTTCTATAAGTTGATGAACTGTATCTTAATTTTCCAATCCATTGAAGGAGTTTAATGTGCCAAAGTGGTTAGCATAAAAATTGCTGACGTATTTTAAATAAGATATTATATCATAGAAATTAATCAACTAATGTTTAACTTTATGACAATATTGAGTAGAAATAAAAAATAAAAAAATGTGACTTGCTTAAGAGTTGCATAATTATTTACAATTGAAGCTAAATATGTATGAGTTGCATCAGGATGACGTGGCATTGTGGGACTATCTCTTAGTAGTTTATGAAACCCAAAATAAACTCCTTAAAAAATAACCATTGAAGATGCTCTAAGGGTTGCCAGCCACTTAATTAAGGCTATTCTTTATACTTAAGTTTTTTTATTCCAATACTATATGTATTTCTTCATCAATTAATATCCATATTCACTATTGATACCTTATTTTCTTTACTTTGTGTACACAGACATCTCAACAGGGCAAGATAGGGATAACATTAATGTGTCAGTGGATGGTGCCACTCTATGATACAAAATTGGATCATCATGCTTCACAAAGAGCCATTGATTTCATGTTTGGATGGTAATTAACTACTTTATGAACCATAAATTATATGTGAAACTCAACTATATATAGTAGTAATTATGCAAGACATTAAACTCTTTTAAAGGAGAAGCCTCAACATAAAATAATGTAACTTCATTGTTGACATTTTCAATTACTATATTTGTTTCCTTAACCAGTGCTCCGGAGGTATCGATTAACATTTCTTTTTAAAAAATGTATTGTAGGTTTATGGATCCATTGACAATAGGAGACTACCCTAGCTCCATGCGGTCCTTGGTAGGGAGTCGATTACCAAAGTTTTCTACATATCAAGTAAAGCTTGTAAGAGGGTCCTTTGATTTTATTGGATTAAACTATTATACTTCCCATTATGCAACTAATGCACCCGAGTTAAGTGAAGCCAAACCCAGCTACATCACAGATTCACTTGTTATTCTTACAAGTAAGTGTCTTAGTGATGATATTTTCCATTAATATTAATAATACAGTAGAATACACCTTAGTTTAACACACAGCAAGATTCATTACTATCACATCTTAAATGTGTGACACTCTAATGCATCAATTAATTCAATTTAAAGCAAAAAATAATCATACCTCTGCAAGTGTGAGTAATAAGTCTTACATTGGATAGAAAAGTGGAGGTTGAACACTTTATAAGTGAGAGAGGACCCATAAAATAAGTGGTTAATGTTTTAAGTTTTGATGGTTAGTAGGGTATATGTTTTATGTTTTCATGGTTAGTGGGGTATTCTAAATTGTTAATTAAATACATGTGAAATAAGTTGTTAATATCATCCATTTTTGTGGTTTTGTTAATTAAATAGATGTGAAATAAGTTGTTAATATCATCCATTTTTGTGGTTAATGGTGTAGTGAAAGTTTTTAATGCCATTATTTTTGTACTTGCAAAAGTACAATAAAAGAATCTAGGGTTTAGACTGTTTATAAGATGCCTTGAGAATTTTTTTGAATCGGCAAAATTTTATTAAAACCGAAACACATGAAAGACGCAACGAGGCGGTGAAACAACAATACAAAGATGCCTTGAGAATGATCCCAACAGTGGTATTTATAACCCTCTGTGGACTTGTTTTTGCTTGACTTAAGCCCTAAGCAAGTTGTGCTTTAAGTCTTTTCATTGACTTCTAGAAGCTTTTAGGAGACTGTTGAGGCGGCGCCTAGGCCTCAAGGGCCTTCGGGAGGGCGTCTAGGCTCTTCTGGAGGGCGCCTAGGCCCTTCTAGAGAGCGCCTAGGCCCTTAGGAGTAGATTGACGGTTCAATTTTGTATTTGTGTTATGAAAGTTCTCCAATATTAAAAAAAACGACAAATAAAAGTATTGTTCATATGTATATGTGTAAAAAGTTGTGTTAGAAATGTTGTTTTTAATAATTATTAACTAGCTAGTAGGAGGAAAATTTGGGTGAACATATGAGTACGGGAATAAATTTGAGCGACATGTAACAACTAAATTTAGTGTAAGCAACTACATATATTTATGTTAACAATTGACTATTATGTAATTTGTTTTTTTTTTTTACAGACAATCGCAATGGAATACCTATTGGCCCAACGGTATGTGCGTGATAATTAAGTTGTAAACCTAATGTTTTTACATTTTAATTACAAACAATATATAATGCTTATTTCAATTAGGTTTTCATTTTATATTTTTTTGGACTTCGTTGACATAAAAGGAACCTATATTACACATGCAGGCAGCTTCAAAATGGTTATCAATTTATCCAAAGGGAATTCATGACCTATTGCTATACATTAAAATAAAGTACAACAACCCGTTGATCTATATCACTGAAAATGGTAATTCTAATACACCAACTAGTTTTTCTTTCAATCTATTTCTTTAAGGTGCCAAAGTTAAGCATTAGTTTATACTCAAATTTAGATAGGAAATTTACGTTAGTTGCAGTTATTTCTCTCTAATATAGTCCCTATGTTCCTGTATGTAAGCACCATTTGCAGCTAATAAAATAGTGTTTAGATATAGAGACGGAGGGAGTACAATTTTATTGTAAACACATTATATTGTGAATTTATATATAGGCATGGATGATTTTAATGATCCAACACTCCCTCTTGAGAAAGCCCTTGAAGACACACAAAGGATTGATTACTATCATGGTCATCTCTACTATCTTCAAACTGCAATAAAGTATGTGCCCTCAAACTAAAAACTTTGCACCGAAAAAATTAAATTAACGATATCTTTGTAATTTATGGTTGTTAAATAAGTTGTCAATCAAATAGTTGTTCAAATAATTTTATCCAAATTTTACAAGGGATGGTGCGAATGTGAACGGGTACTTTGCATGGTCATTGATTGACAACTTTGAATGGACTTCAGGCTACACTTCAAGGTTTGGAATATACTTCGTAGATTACAATAATGGCCTCAAAAGATATCCAAAAATGTCAGCCATTTGGTTTAGGGATTTCCTACAACATAAAACAGTTACAAATAGTGATTCACGCTGA
Protein sequence

>MS.gene05241.t1

MALNVLLSGIVVILNSLAIIDATILLTNDISKSLNRSNFPQGFIFGTSSSAYQYEGAANVGGKGPSIWDTFTHNYPGKIKDKSNGDIAIDQYHRYKEDVEMMKDINMDAYRFSISWSRILPKGKIGGGVNKEGINYYNNLINELLAKGLQPFVTLFHWDLPQTLEEEYGGFLSPNIVNDFQDYSELCFKEFGDRVKHWITLNEPWSFAKHAYADGKLAPGRCSPWQNLNCTGGDSATEPYIAAHNKILAHASAVNVYKTKYQTSQQGKIGITLMCQWMVPLYDTKLDHHASQRAIDFMFGWFMDPLTIGDYPSSMRSLVGSRLPKFSTYQVKLVRGSFDFIGLNYYTSHYATNAPELSEAKPSYITDSLVILTNNRNGIPIGPTAASKWLSIYPKGIHDLLLYIKIKYNNPLIYITENGMDDFNDPTLPLEKALEDTQRIDYYHGHLYYLQTAIKDGANVNGYFAWSLIDNFEWTSGYTSRFGIYFVDYNNGLKRYPKMSAIWFRDFLQHKTVTNSDSR