Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58761.t1 | RHN64084.1 | 99.7 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.00E+00 | 1302.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58761.t1 | Q9FYQ8 | 84.5 | 658 | 100 | 2 | 1 | 656 | 1 | 658 | 0.0e+00 | 1136.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58761.t1 | A0A396IID5 | 99.7 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.0e+00 | 1302.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050818 | MS.gene58761 | 0.80511 | 1.56E-49 | -1.69E-46 |
MS.gene053281 | MS.gene58761 | 0.800109 | 1.68E-48 | -1.69E-46 |
MS.gene057195 | MS.gene58761 | 0.843975 | 1.01E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene36542 | MS.gene58761 | PPI |
MS.gene014910 | MS.gene58761 | PPI |
MS.gene011190 | MS.gene58761 | PPI |
MS.gene58761 | MS.gene36992 | PPI |
MS.gene58761 | MS.gene020254 | PPI |
MS.gene80184 | MS.gene58761 | PPI |
MS.gene58761 | MS.gene058486 | PPI |
MS.gene33117 | MS.gene58761 | PPI |
MS.gene051485 | MS.gene58761 | PPI |
MS.gene32702 | MS.gene58761 | PPI |
MS.gene58761 | MS.gene016086 | PPI |
MS.gene58761 | MS.gene36990 | PPI |
MS.gene58761 | MS.gene42664 | PPI |
MS.gene58761 | MS.gene80181 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58761.t1 | MTR_0204s0010 | 100.000 | 448 | 0 | 0 | 209 | 656 | 1 | 448 | 0.0 | 905 |
MS.gene58761.t1 | MTR_3g082140 | 67.530 | 656 | 201 | 7 | 7 | 656 | 10 | 659 | 0.0 | 882 |
MS.gene58761.t1 | MTR_5g098730 | 67.085 | 638 | 201 | 7 | 23 | 656 | 33 | 665 | 0.0 | 872 |
MS.gene58761.t1 | MTR_8g016270 | 44.228 | 667 | 313 | 12 | 10 | 656 | 21 | 648 | 0.0 | 560 |
MS.gene58761.t1 | MTR_1g014080 | 43.891 | 663 | 314 | 12 | 14 | 656 | 13 | 637 | 0.0 | 543 |
MS.gene58761.t1 | MTR_3g105950 | 44.697 | 660 | 302 | 13 | 19 | 656 | 18 | 636 | 0.0 | 543 |
MS.gene58761.t1 | MTR_4g116770 | 92.754 | 207 | 13 | 1 | 1 | 207 | 1 | 205 | 3.04e-130 | 400 |
MS.gene58761.t1 | MTR_5g077170 | 27.673 | 636 | 378 | 16 | 32 | 656 | 27 | 591 | 5.67e-79 | 262 |
MS.gene58761.t1 | MTR_6g074910 | 27.969 | 640 | 375 | 17 | 29 | 656 | 23 | 588 | 5.58e-78 | 259 |
MS.gene58761.t1 | MTR_4g053270 | 28.527 | 638 | 366 | 15 | 32 | 656 | 29 | 589 | 2.93e-71 | 242 |
MS.gene58761.t1 | MTR_8g088730 | 36.905 | 420 | 247 | 9 | 247 | 656 | 178 | 589 | 1.18e-66 | 229 |
MS.gene58761.t1 | MTR_2g006300 | 36.930 | 417 | 245 | 9 | 250 | 656 | 175 | 583 | 2.97e-63 | 220 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58761.t1 | AT5G35160 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
MS.gene58761.t1 | AT5G35160 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
MS.gene58761.t1 | AT5G35160 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
MS.gene58761.t1 | AT5G35160 | 81.763 | 658 | 90 | 3 | 1 | 656 | 1 | 630 | 0.0 | 1083 |
MS.gene58761.t1 | AT4G12650 | 67.593 | 648 | 199 | 6 | 14 | 656 | 11 | 652 | 0.0 | 862 |
MS.gene58761.t1 | AT3G13772 | 44.495 | 654 | 304 | 13 | 23 | 656 | 27 | 641 | 0.0 | 555 |
MS.gene58761.t1 | AT5G10840 | 43.797 | 669 | 312 | 13 | 13 | 656 | 19 | 648 | 0.0 | 546 |
MS.gene58761.t1 | AT5G25100 | 43.498 | 669 | 310 | 13 | 14 | 656 | 18 | 644 | 0.0 | 542 |
MS.gene58761.t1 | AT2G24170 | 44.122 | 655 | 307 | 12 | 22 | 656 | 22 | 637 | 0.0 | 540 |
MS.gene58761.t1 | AT5G25100 | 43.343 | 676 | 308 | 14 | 14 | 656 | 18 | 651 | 0.0 | 540 |
MS.gene58761.t1 | AT1G55130 | 42.511 | 661 | 321 | 12 | 16 | 656 | 16 | 637 | 0.0 | 538 |
MS.gene58761.t1 | AT2G24170 | 42.140 | 458 | 211 | 9 | 22 | 462 | 22 | 442 | 5.20e-120 | 365 |
MS.gene58761.t1 | AT2G01970 | 27.889 | 649 | 383 | 16 | 20 | 656 | 17 | 592 | 3.06e-84 | 276 |
MS.gene58761.t1 | AT1G08350 | 29.376 | 657 | 370 | 19 | 14 | 656 | 13 | 589 | 3.23e-81 | 268 |
MS.gene58761.t1 | AT1G08350 | 29.376 | 657 | 370 | 19 | 14 | 656 | 13 | 589 | 3.23e-81 | 268 |
MS.gene58761.t1 | AT1G14670 | 28.947 | 646 | 380 | 16 | 20 | 656 | 17 | 592 | 3.11e-80 | 266 |
MS.gene58761.t1 | AT5G37310 | 27.717 | 635 | 378 | 15 | 32 | 656 | 30 | 593 | 3.59e-78 | 260 |
MS.gene58761.t1 | AT5G37310 | 27.717 | 635 | 378 | 15 | 32 | 656 | 30 | 593 | 3.59e-78 | 260 |
MS.gene58761.t1 | AT1G08350 | 28.351 | 582 | 329 | 15 | 88 | 656 | 2 | 508 | 1.38e-67 | 230 |
MS.gene58761.t1 | AT1G08350 | 28.881 | 599 | 324 | 19 | 14 | 598 | 13 | 523 | 3.67e-67 | 229 |
MS.gene58761.t1 | AT1G10950 | 36.691 | 417 | 246 | 9 | 250 | 656 | 181 | 589 | 9.14e-65 | 224 |
Find 183 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTGGTCTCCTCATATTTA+TGG | 0.158373 | 8.1:+10346817 | None:intergenic |
ATCAAATACAAGATAGTTTA+TGG | 0.166753 | 8.1:+10345546 | None:intergenic |
CAATCTTGAACTTCCTATTA+TGG | 0.180368 | 8.1:-10346011 | MS.gene58761:CDS |
TTGGGTTCCTCTCTTCATTC+TGG | 0.207220 | 8.1:-10345432 | MS.gene58761:CDS |
GAGGAATTTCTCTAGGAATT+TGG | 0.209657 | 8.1:+10345845 | None:intergenic |
CCCTGTTGGTATTAAGATTC+AGG | 0.247344 | 8.1:-10346883 | MS.gene58761:CDS |
TCCTTCTTTGTTGTGTATAA+TGG | 0.248630 | 8.1:-10346286 | MS.gene58761:CDS |
TTCTCAGATCCTTCCTTAAC+AGG | 0.259590 | 8.1:+10346750 | None:intergenic |
GGATCGAGAATTCGCCTTAT+AGG | 0.263740 | 8.1:-10347088 | MS.gene58761:CDS |
ATGGTGATCACTTTCCTTGC+TGG | 0.283624 | 8.1:-10346453 | MS.gene58761:CDS |
GGTGATGGAGTTCAGATTCT+TGG | 0.295289 | 8.1:-10346261 | MS.gene58761:CDS |
ATTTGTTTGGTGTTTCAATC+AGG | 0.295668 | 8.1:-10347302 | MS.gene58761:CDS |
AGCGGCTGGCCTTCTTTAAT+AGG | 0.301449 | 8.1:+10346594 | None:intergenic |
AATATAACAAAGAGAGAAAA+TGG | 0.302358 | 8.1:+10345964 | None:intergenic |
TCTTTATCATGTCCAGCATT+TGG | 0.304826 | 8.1:-10345747 | MS.gene58761:CDS |
GACCAATGTGGCTCGTGTTA+TGG | 0.324827 | 8.1:-10346802 | MS.gene58761:CDS |
GGTAAACTATAATAACTAAA+TGG | 0.337219 | 8.1:+10347179 | None:intergenic |
GGAATTTGGTTGGTTCTAAC+AGG | 0.337867 | 8.1:+10345859 | None:intergenic |
TACTTTGGCTTCCCCATAAT+AGG | 0.338322 | 8.1:+10345998 | None:intergenic |
AATCTTGAACTTCCTATTAT+GGG | 0.344499 | 8.1:-10346010 | MS.gene58761:CDS |
TGTTTCTGCAACTCTGTACT+TGG | 0.345457 | 8.1:-10345503 | MS.gene58761:CDS |
CTGGGTCATGGCTATTTGTT+TGG | 0.351997 | 8.1:-10347315 | MS.gene58761:CDS |
TTGTTATATTGCTATTGCTT+TGG | 0.352574 | 8.1:-10345951 | MS.gene58761:CDS |
TTATCTTCTTGAGAACTGTT+AGG | 0.357759 | 8.1:-10346419 | MS.gene58761:CDS |
GTAAACATCTTAAACCTATA+AGG | 0.359924 | 8.1:+10347074 | None:intergenic |
GGGTATGGTTTCTACCTTCC+GGG | 0.364387 | 8.1:-10347281 | MS.gene58761:CDS |
ACCAATGTGGCTCGTGTTAT+GGG | 0.372249 | 8.1:-10346801 | MS.gene58761:CDS |
CACAACAAAGAAGGATTTGA+TGG | 0.373080 | 8.1:+10346294 | None:intergenic |
GGTGCTGGCACCCTTCCCTT+TGG | 0.373371 | 8.1:-10345790 | MS.gene58761:CDS |
TCCTGAATCTTAATACCAAC+AGG | 0.375336 | 8.1:+10346882 | None:intergenic |
CTTATCAAGCTCCTCATAAC+TGG | 0.375567 | 8.1:+10346386 | None:intergenic |
CTCGATCCTCAATTCGTTGA+TGG | 0.377219 | 8.1:-10346472 | MS.gene58761:CDS |
ACACTTGTTGGTGGCTACTT+TGG | 0.378171 | 8.1:-10345907 | MS.gene58761:CDS |
GTCGATGGATCACATTTAAT+AGG | 0.380805 | 8.1:+10346627 | None:intergenic |
CTTGGGATACTCACTCTTCA+TGG | 0.381798 | 8.1:-10345485 | MS.gene58761:CDS |
TCTGTCCCACTTACACTTGT+TGG | 0.386331 | 8.1:-10345919 | MS.gene58761:CDS |
TGGAAATCATTCTTTGCCTC+TGG | 0.395692 | 8.1:-10345598 | MS.gene58761:CDS |
GTGATGGAGTTCAGATTCTT+GGG | 0.403271 | 8.1:-10346260 | MS.gene58761:CDS |
TATCATGTCCAGCATTTGGA+TGG | 0.407267 | 8.1:-10345743 | MS.gene58761:CDS |
TACCCACACAATTATGCAAT+TGG | 0.410515 | 8.1:-10347254 | MS.gene58761:CDS |
GTACATGGTTGTTGGGTTTG+AGG | 0.411511 | 8.1:-10346721 | MS.gene58761:CDS |
TAAAGAACAGCTCAATGAAA+AGG | 0.422226 | 8.1:+10345764 | None:intergenic |
TGGTTGGAAGCTTGTGGTGG+GGG | 0.425246 | 8.1:-10346331 | MS.gene58761:CDS |
AAGCCGGGGTACATGGTTGT+TGG | 0.426097 | 8.1:-10346729 | MS.gene58761:CDS |
GTGCGGCGATCAGAAGGGTT+GGG | 0.426321 | 8.1:-10346091 | MS.gene58761:CDS |
AGCCGGGGTACATGGTTGTT+GGG | 0.426832 | 8.1:-10346728 | MS.gene58761:CDS |
ATATCAAGTGGCCATCTAGA+TGG | 0.430148 | 8.1:-10346536 | MS.gene58761:CDS |
TCTGGTTGGAAGCTTGTGGT+GGG | 0.432889 | 8.1:-10346333 | MS.gene58761:CDS |
AAGTACAGAGTTGCAGAAAC+AGG | 0.445695 | 8.1:+10345505 | None:intergenic |
CAGATGAATGAGGAGTTATC+TGG | 0.450439 | 8.1:-10346351 | MS.gene58761:CDS |
ATCTGGTTGGAAGCTTGTGG+TGG | 0.453164 | 8.1:-10346334 | MS.gene58761:CDS |
ACAATATTGTTTGCTGCACT+TGG | 0.457516 | 8.1:-10346225 | MS.gene58761:CDS |
ATGGAATGGCTCCTGTACTT+TGG | 0.461027 | 8.1:+10345983 | None:intergenic |
TTGGTGTTTCAATCAGGGTA+TGG | 0.463389 | 8.1:-10347296 | MS.gene58761:CDS |
TGCACCTCTGTGTGGAGGAT+TGG | 0.467543 | 8.1:-10345630 | MS.gene58761:CDS |
TCTTCTGTGAAGTTGGATTG+AGG | 0.467795 | 8.1:-10345391 | None:intergenic |
ATCTGAGAAGCCGGGGTACA+TGG | 0.468660 | 8.1:-10346736 | MS.gene58761:CDS |
AGGGTATGGTTTCTACCTTC+CGG | 0.473489 | 8.1:-10347282 | MS.gene58761:CDS |
GAGGGATCTGGCCAGTTATG+AGG | 0.477456 | 8.1:-10346397 | MS.gene58761:CDS |
GAGGATGAAGAAGGCAATAC+CGG | 0.480232 | 8.1:+10346035 | None:intergenic |
TGTTCTTGTCCATAAATATG+AGG | 0.481033 | 8.1:-10346826 | MS.gene58761:CDS |
AGGGTTGGGTTTCAGTTGCA+TGG | 0.484208 | 8.1:-10346077 | MS.gene58761:CDS |
AAGTAAGCATCCCATCTAGA+TGG | 0.484918 | 8.1:+10346525 | None:intergenic |
CGTGCGGCGATCAGAAGGGT+TGG | 0.485992 | 8.1:-10346092 | MS.gene58761:CDS |
AAGGATAGTGCTGAGAATCT+AGG | 0.486339 | 8.1:-10347131 | MS.gene58761:CDS |
GTCCCACTTACACTTGTTGG+TGG | 0.488890 | 8.1:-10345916 | MS.gene58761:CDS |
TTTGTTTGGTGTTTCAATCA+GGG | 0.489983 | 8.1:-10347301 | MS.gene58761:CDS |
CAAATTCAAATTCTGGGTCA+TGG | 0.490284 | 8.1:-10347327 | MS.gene58761:CDS |
TTGTGTATAATGGTTGGTGA+TGG | 0.492346 | 8.1:-10346276 | MS.gene58761:CDS |
ACTCGCGTGCGGCGATCAGA+AGG | 0.493442 | 8.1:-10346097 | MS.gene58761:CDS |
TACCTACGAGGTAACGTTTG+AGG | 0.495432 | 8.1:-10346565 | MS.gene58761:CDS |
ATGGGATGCTTACTTGAAGA+TGG | 0.497074 | 8.1:-10346517 | MS.gene58761:CDS |
CAGTTATGAGGAGCTTGATA+AGG | 0.497655 | 8.1:-10346385 | MS.gene58761:CDS |
ATGATACTTGGTATTGCTGC+TGG | 0.498593 | 8.1:-10346147 | MS.gene58761:CDS |
CTCAATGAAAAGGGTTCCAA+AGG | 0.503492 | 8.1:+10345774 | None:intergenic |
GATCGAGAACCAATGGACTT+TGG | 0.504056 | 8.1:+10346488 | None:intergenic |
CGTAGGTAAACGCAAGCGGC+TGG | 0.506527 | 8.1:+10346580 | None:intergenic |
TGTTGGTGACAGGCACAGTT+GGG | 0.507832 | 8.1:-10345450 | MS.gene58761:CDS |
AAAGCTGCTTGTTTCTTCCC+CGG | 0.509099 | 8.1:-10346054 | MS.gene58761:CDS |
TGCAATTGGTGATGAATTGT+CGG | 0.510847 | 8.1:-10347240 | MS.gene58761:CDS |
TGGAGGATTGGAGATGGTGG+TGG | 0.512530 | 8.1:-10345618 | MS.gene58761:CDS |
CAAGAACATTAAATCTAAGA+TGG | 0.515293 | 8.1:+10346841 | None:intergenic |
CTAGCAATCATGTTGGTGAC+AGG | 0.515495 | 8.1:-10345460 | MS.gene58761:CDS |
GAGAACTGTTAGGAGGGATC+TGG | 0.516130 | 8.1:-10346409 | MS.gene58761:CDS |
GAATCTAGGTGAGCTTCTCA+TGG | 0.516684 | 8.1:-10347117 | MS.gene58761:CDS |
AAAGAACAGCTCAATGAAAA+GGG | 0.520078 | 8.1:+10345765 | None:intergenic |
TCTTGTGGTGGTTTGTGCTG+AGG | 0.521715 | 8.1:-10345674 | MS.gene58761:CDS |
TAGCCACCAACAAGTGTAAG+TGG | 0.522399 | 8.1:+10345913 | None:intergenic |
GTGGCTCGTGTTATGGGAAC+CGG | 0.523916 | 8.1:-10346795 | MS.gene58761:CDS |
ACCTGTGATAAGTGTTCCAC+GGG | 0.526211 | 8.1:+10346185 | None:intergenic |
TGATCACCATCAACGAATTG+AGG | 0.527193 | 8.1:+10346466 | None:intergenic |
AACACGGCCCATCCAAATGC+TGG | 0.527959 | 8.1:+10345735 | None:intergenic |
TTCATGTCACCGGCCTCCCG+TGG | 0.527959 | 8.1:-10346201 | MS.gene58761:CDS |
AAGGAAGGATCTGAGAAGCC+GGG | 0.528711 | 8.1:-10346744 | MS.gene58761:CDS |
AATTTCTCTAGGAATTTGGT+TGG | 0.529324 | 8.1:+10345849 | None:intergenic |
ATAAGTGTTCCACGGGAGGC+CGG | 0.530499 | 8.1:+10346192 | None:intergenic |
ACCATTATACACAACAAAGA+AGG | 0.534847 | 8.1:+10346285 | None:intergenic |
CTGGTTGGAAGCTTGTGGTG+GGG | 0.535511 | 8.1:-10346332 | MS.gene58761:CDS |
AATCATCTCAGCCGCATCAC+CGG | 0.536909 | 8.1:+10346776 | None:intergenic |
TCTTTGTTGTGTATAATGGT+TGG | 0.537010 | 8.1:-10346282 | MS.gene58761:CDS |
TCACCAATTGCATAATTGTG+TGG | 0.538717 | 8.1:+10347251 | None:intergenic |
CTTCTTGAGAACTGTTAGGA+GGG | 0.539675 | 8.1:-10346415 | MS.gene58761:CDS |
ATAGGCATTGCCACAGTCGA+TGG | 0.540885 | 8.1:+10346612 | None:intergenic |
CGCTGCTGAGGAATTTCTCT+AGG | 0.541640 | 8.1:+10345838 | None:intergenic |
TAAGGAAGGATCTGAGAAGC+CGG | 0.543364 | 8.1:-10346745 | MS.gene58761:CDS |
TCTTCTTGAGAACTGTTAGG+AGG | 0.545064 | 8.1:-10346416 | MS.gene58761:CDS |
AGGATGAAGAAGGCAATACC+GGG | 0.546046 | 8.1:+10346036 | None:intergenic |
ATCATGTCCAGCATTTGGAT+GGG | 0.548416 | 8.1:-10345742 | MS.gene58761:CDS |
TATCAAGTGGCCATCTAGAT+GGG | 0.549497 | 8.1:-10346535 | MS.gene58761:CDS |
GGATCACATTTAATAGGTGA+CGG | 0.552812 | 8.1:+10346633 | None:intergenic |
TGGTGGCTACTTTGGAGCAA+AGG | 0.554397 | 8.1:-10345899 | MS.gene58761:CDS |
ATGTTGGTGACAGGCACAGT+TGG | 0.557996 | 8.1:-10345451 | MS.gene58761:CDS |
AATCTAGGTGAGCTTCTCAT+GGG | 0.557996 | 8.1:-10347116 | MS.gene58761:CDS |
GGATGCTTACTTGAAGATGG+AGG | 0.561604 | 8.1:-10346514 | MS.gene58761:CDS |
TTCTTCGTAAAACGAATAGC+AGG | 0.562872 | 8.1:+10346936 | None:intergenic |
TGGAGGGAGCCAAAGTCCAT+TGG | 0.566645 | 8.1:-10346497 | MS.gene58761:CDS |
TGAAAAGGGTTCCAAAGGGA+AGG | 0.570056 | 8.1:+10345779 | None:intergenic |
CACCAATTGCATAATTGTGT+GGG | 0.570143 | 8.1:+10347252 | None:intergenic |
TCTCAGATCCTTCCTTAACA+GGG | 0.572609 | 8.1:+10346751 | None:intergenic |
TGGAGTTCAGATTCTTGGGA+TGG | 0.573301 | 8.1:-10346256 | MS.gene58761:CDS |
GTGGCAATGCCTATTAAAGA+AGG | 0.576450 | 8.1:-10346603 | MS.gene58761:CDS |
GATCACATTTAATAGGTGAC+GGG | 0.577005 | 8.1:+10346634 | None:intergenic |
GTGTGGAGGATTGGAGATGG+TGG | 0.579374 | 8.1:-10345621 | MS.gene58761:CDS |
CAAGATTGTGAGGATGAAGA+AGG | 0.582999 | 8.1:+10346026 | None:intergenic |
GATGTTTACTAATGAGTCTG+AGG | 0.583355 | 8.1:-10347060 | MS.gene58761:CDS |
GTTATCTGGTTGGAAGCTTG+TGG | 0.588427 | 8.1:-10346337 | MS.gene58761:CDS |
TCCCATAACACGAGCCACAT+TGG | 0.588765 | 8.1:+10346800 | None:intergenic |
TGCACTTGGATTCATGTCAC+CGG | 0.589020 | 8.1:-10346211 | MS.gene58761:CDS |
GTTTCTGCAACTCTGTACTT+GGG | 0.589552 | 8.1:-10345502 | MS.gene58761:CDS |
AGATGGACTGGGTACCCTGT+TGG | 0.591209 | 8.1:-10346897 | MS.gene58761:CDS |
ATCTTGAACTTCCTATTATG+GGG | 0.592990 | 8.1:-10346009 | MS.gene58761:CDS |
TTATGGGGAAGCCAAAGTAC+AGG | 0.594384 | 8.1:-10345994 | MS.gene58761:CDS |
AATTGAGGATCGAGAACCAA+TGG | 0.597715 | 8.1:+10346481 | None:intergenic |
GTTATGTTTCAGTTCGACTG+TGG | 0.597723 | 8.1:-10346125 | MS.gene58761:CDS |
TCCCGTGGAACACTTATCAC+AGG | 0.598031 | 8.1:-10346186 | MS.gene58761:CDS |
CTCGCGTGCGGCGATCAGAA+GGG | 0.598186 | 8.1:-10346096 | MS.gene58761:CDS |
CATGGTTCTAGCAATCATGT+TGG | 0.600699 | 8.1:-10345467 | MS.gene58761:CDS |
AAGAAGGATTTGATGGAGCA+CGG | 0.601804 | 8.1:+10346301 | None:intergenic |
TACCTGTGATAAGTGTTCCA+CGG | 0.602595 | 8.1:+10346184 | None:intergenic |
TCAATGAAAAGGGTTCCAAA+GGG | 0.608377 | 8.1:+10345775 | None:intergenic |
TAATTGTGTGGGTAACTACC+CGG | 0.608773 | 8.1:+10347263 | None:intergenic |
AACAAAGAGAGAAAATGGAA+TGG | 0.610331 | 8.1:+10345969 | None:intergenic |
AGCTCAAGCACAGATGAATG+AGG | 0.617907 | 8.1:-10346361 | MS.gene58761:CDS |
CTCAGATCCTTCCTTAACAG+GGG | 0.621573 | 8.1:+10346752 | None:intergenic |
ATCTAGGTGAGCTTCTCATG+GGG | 0.627364 | 8.1:-10347115 | MS.gene58761:CDS |
TCTGTGTGGAGGATTGGAGA+TGG | 0.630692 | 8.1:-10345624 | MS.gene58761:CDS |
CACGACGGATACCGCTGCTG+AGG | 0.631043 | 8.1:+10345826 | None:intergenic |
GATGCTTACTTGAAGATGGA+GGG | 0.631078 | 8.1:-10346513 | MS.gene58761:CDS |
GAAAAGGGTTCCAAAGGGAA+GGG | 0.631885 | 8.1:+10345780 | None:intergenic |
TGAATGAGGAGTTATCTGGT+TGG | 0.637187 | 8.1:-10346347 | MS.gene58761:CDS |
TCAGATCCTTCCTTAACAGG+GGG | 0.637373 | 8.1:+10346753 | None:intergenic |
TGTGATAAGTGTTCCACGGG+AGG | 0.637733 | 8.1:+10346188 | None:intergenic |
TGGTTCTAACAGGATACTCA+AGG | 0.638465 | 8.1:+10345869 | None:intergenic |
CTCAGCAGCGGTATCCGTCG+TGG | 0.639819 | 8.1:-10345825 | MS.gene58761:CDS |
ACCCGAAAACATAGTAAACA+CGG | 0.641523 | 8.1:+10345719 | None:intergenic |
TTGAGGAGAGTGATATCAAG+TGG | 0.642653 | 8.1:-10346548 | MS.gene58761:CDS |
GCATTATGCATAATACTACA+AGG | 0.643881 | 8.1:+10346693 | None:intergenic |
ATAGGAAGTTCAAGATTGTG+AGG | 0.645085 | 8.1:+10346016 | None:intergenic |
AACCCAACAACCATGTACCC+CGG | 0.645248 | 8.1:+10346726 | None:intergenic |
CTAGAGAAATTCCTCAGCAG+CGG | 0.650903 | 8.1:-10345837 | MS.gene58761:CDS |
TTACATGCACCTCTGTGTGG+AGG | 0.651300 | 8.1:-10345635 | MS.gene58761:CDS |
AACTTACATGCACCTCTGTG+TGG | 0.652266 | 8.1:-10345638 | MS.gene58761:CDS |
CTCCTCAAACGTTACCTCGT+AGG | 0.655284 | 8.1:+10346563 | None:intergenic |
AGGAAGGATCTGAGAAGCCG+GGG | 0.657385 | 8.1:-10346743 | MS.gene58761:CDS |
AGCCACCAACAAGTGTAAGT+GGG | 0.658396 | 8.1:+10345914 | None:intergenic |
ACCTCGTAGGTAAACGCAAG+CGG | 0.659065 | 8.1:+10346576 | None:intergenic |
TGGTGATGAATTGTCGGTGA+AGG | 0.659099 | 8.1:-10347234 | MS.gene58761:CDS |
GCCGCTTGCGTTTACCTACG+AGG | 0.660211 | 8.1:-10346577 | MS.gene58761:CDS |
ACACGAACCAGAATGAAGAG+AGG | 0.661550 | 8.1:+10345425 | None:intergenic |
TGTTATGGGAACCGGTGATG+CGG | 0.663081 | 8.1:-10346787 | MS.gene58761:CDS |
TAACAAGAACAATACCAGCA+AGG | 0.672966 | 8.1:+10346439 | None:intergenic |
CTAACAGGATACTCAAGGTG+AGG | 0.675817 | 8.1:+10345874 | None:intergenic |
TTTGATCTCAAGAATCTGAG+TGG | 0.676176 | 8.1:-10345529 | MS.gene58761:CDS |
CTGTGGAGAACACTCGCGTG+CGG | 0.676822 | 8.1:-10346108 | MS.gene58761:CDS |
CCTGAATCTTAATACCAACA+GGG | 0.677762 | 8.1:+10346883 | None:intergenic |
GTACAGTGCAACAGAACCAG+AGG | 0.685889 | 8.1:+10345582 | None:intergenic |
TAAATGTGATCCATCGACTG+TGG | 0.688100 | 8.1:-10346622 | MS.gene58761:CDS |
CCTAGAACTAAAAGCCACGA+CGG | 0.690997 | 8.1:+10345811 | None:intergenic |
TGTGTGGGTAACTACCCGGA+AGG | 0.693942 | 8.1:+10347267 | None:intergenic |
TCTAGGTGAGCTTCTCATGG+GGG | 0.697948 | 8.1:-10347114 | MS.gene58761:CDS |
TAAATATGAGGAGACCAATG+TGG | 0.708708 | 8.1:-10346814 | MS.gene58761:CDS |
ATCTCCAATCCTCCACACAG+AGG | 0.744593 | 8.1:+10345626 | None:intergenic |
GGATGAAGAAGGCAATACCG+GGG | 0.767636 | 8.1:+10346037 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATAACAAAGAGAGAAAA+TGG | + | chr8.1:10346773-10346792 | None:intergenic | 20.0% |
!! | ATCAAATACAAGATAGTTTA+TGG | + | chr8.1:10347191-10347210 | None:intergenic | 20.0% |
!! | GGTAAACTATAATAACTAAA+TGG | + | chr8.1:10345558-10345577 | None:intergenic | 20.0% |
!!! | TTTTCACAAATTCAAATTCT+GGG | - | chr8.1:10345401-10345420 | MS.gene58761:CDS | 20.0% |
! | AATCTTGAACTTCCTATTAT+GGG | - | chr8.1:10346724-10346743 | MS.gene58761:CDS | 25.0% |
! | CAAGAACATTAAATCTAAGA+TGG | + | chr8.1:10345896-10345915 | None:intergenic | 25.0% |
! | GTAAACATCTTAAACCTATA+AGG | + | chr8.1:10345663-10345682 | None:intergenic | 25.0% |
!! | CTTTTCACAAATTCAAATTC+TGG | - | chr8.1:10345400-10345419 | MS.gene58761:CDS | 25.0% |
!! | TTGTTATATTGCTATTGCTT+TGG | - | chr8.1:10346783-10346802 | MS.gene58761:CDS | 25.0% |
AAAGAACAGCTCAATGAAAA+GGG | + | chr8.1:10346972-10346991 | None:intergenic | 30.0% | |
AACAAAGAGAGAAAATGGAA+TGG | + | chr8.1:10346768-10346787 | None:intergenic | 30.0% | |
ACCATTATACACAACAAAGA+AGG | + | chr8.1:10346452-10346471 | None:intergenic | 30.0% | |
AGTTCAAGATCTTGAAAAAG+AGG | - | chr8.1:10345733-10345752 | MS.gene58761:CDS | 30.0% | |
ATCTTGAACTTCCTATTATG+GGG | - | chr8.1:10346725-10346744 | MS.gene58761:CDS | 30.0% | |
CAATCTTGAACTTCCTATTA+TGG | - | chr8.1:10346723-10346742 | MS.gene58761:CDS | 30.0% | |
GCATTATGCATAATACTACA+AGG | + | chr8.1:10346044-10346063 | None:intergenic | 30.0% | |
TAAAGAACAGCTCAATGAAA+AGG | + | chr8.1:10346973-10346992 | None:intergenic | 30.0% | |
TGTTCTTGTCCATAAATATG+AGG | - | chr8.1:10345908-10345927 | MS.gene58761:CDS | 30.0% | |
TTATCTTCTTGAGAACTGTT+AGG | - | chr8.1:10346315-10346334 | MS.gene58761:CDS | 30.0% | |
! | AATTTCTCTAGGAATTTGGT+TGG | + | chr8.1:10346888-10346907 | None:intergenic | 30.0% |
! | TACCTTTTTGTAAACCTCAA+GGG | - | chr8.1:10345574-10345593 | MS.gene58761:CDS | 30.0% |
! | TCCTTCTTTGTTGTGTATAA+TGG | - | chr8.1:10346448-10346467 | MS.gene58761:CDS | 30.0% |
! | TCTTTGTTGTGTATAATGGT+TGG | - | chr8.1:10346452-10346471 | MS.gene58761:CDS | 30.0% |
! | TTACCTTTTTGTAAACCTCA+AGG | - | chr8.1:10345573-10345592 | MS.gene58761:CDS | 30.0% |
!! | AAGATGAGTACTTTTTGAGA+TGG | - | chr8.1:10345820-10345839 | MS.gene58761:CDS | 30.0% |
!! | ATTTGTTTGGTGTTTCAATC+AGG | - | chr8.1:10345432-10345451 | MS.gene58761:CDS | 30.0% |
!! | CTGTTTTTCTACATGATACT+TGG | - | chr8.1:10346575-10346594 | MS.gene58761:CDS | 30.0% |
!! | TTTGTTTGGTGTTTCAATCA+GGG | - | chr8.1:10345433-10345452 | MS.gene58761:CDS | 30.0% |
!!! | CATTGTTTTGATTCTTCTTG+TGG | - | chr8.1:10347045-10347064 | MS.gene58761:CDS | 30.0% |
ACCCGAAAACATAGTAAACA+CGG | + | chr8.1:10347018-10347037 | None:intergenic | 35.0% | |
ATAGGAAGTTCAAGATTGTG+AGG | + | chr8.1:10346721-10346740 | None:intergenic | 35.0% | |
CAAATTCAAATTCTGGGTCA+TGG | - | chr8.1:10345407-10345426 | MS.gene58761:CDS | 35.0% | |
CACAACAAAGAAGGATTTGA+TGG | + | chr8.1:10346443-10346462 | None:intergenic | 35.0% | |
CACCAATTGCATAATTGTGT+GGG | + | chr8.1:10345485-10345504 | None:intergenic | 35.0% | |
CCTGAATCTTAATACCAACA+GGG | + | chr8.1:10345854-10345873 | None:intergenic | 35.0% | |
GATCACATTTAATAGGTGAC+GGG | + | chr8.1:10346103-10346122 | None:intergenic | 35.0% | |
GATGTTTACTAATGAGTCTG+AGG | - | chr8.1:10345674-10345693 | MS.gene58761:CDS | 35.0% | |
GGATCACATTTAATAGGTGA+CGG | + | chr8.1:10346104-10346123 | None:intergenic | 35.0% | |
GTCGATGGATCACATTTAAT+AGG | + | chr8.1:10346110-10346129 | None:intergenic | 35.0% | |
TAAATATGAGGAGACCAATG+TGG | - | chr8.1:10345920-10345939 | MS.gene58761:CDS | 35.0% | |
TAACAAGAACAATACCAGCA+AGG | + | chr8.1:10346298-10346317 | None:intergenic | 35.0% | |
TACCCACACAATTATGCAAT+TGG | - | chr8.1:10345480-10345499 | MS.gene58761:CDS | 35.0% | |
TCAATGAAAAGGGTTCCAAA+GGG | + | chr8.1:10346962-10346981 | None:intergenic | 35.0% | |
TCACCAATTGCATAATTGTG+TGG | + | chr8.1:10345486-10345505 | None:intergenic | 35.0% | |
TCCTGAATCTTAATACCAAC+AGG | + | chr8.1:10345855-10345874 | None:intergenic | 35.0% | |
TCTTTATCATGTCCAGCATT+TGG | - | chr8.1:10346987-10347006 | MS.gene58761:CDS | 35.0% | |
TTCTTCGTAAAACGAATAGC+AGG | + | chr8.1:10345801-10345820 | None:intergenic | 35.0% | |
TTTGATCTCAAGAATCTGAG+TGG | - | chr8.1:10347205-10347224 | MS.gene58761:CDS | 35.0% | |
! | ACAATATTGTTTGCTGCACT+TGG | - | chr8.1:10346509-10346528 | MS.gene58761:CDS | 35.0% |
! | ACCTTTTTGTAAACCTCAAG+GGG | - | chr8.1:10345575-10345594 | MS.gene58761:CDS | 35.0% |
! | CATTGGTCTCCTCATATTTA+TGG | + | chr8.1:10345920-10345939 | None:intergenic | 35.0% |
! | GAGGAATTTCTCTAGGAATT+TGG | + | chr8.1:10346892-10346911 | None:intergenic | 35.0% |
!! | CTTGTTTTCTTCTGTGAAGT+TGG | - | chr8.1:10347336-10347355 | MS.gene58761:CDS | 35.0% |
!! | TGCAATTGGTGATGAATTGT+CGG | - | chr8.1:10345494-10345513 | MS.gene58761:CDS | 35.0% |
!! | TTGTGTATAATGGTTGGTGA+TGG | - | chr8.1:10346458-10346477 | MS.gene58761:CDS | 35.0% |
!!! | AGTACTTTTTGAGATGGACT+GGG | - | chr8.1:10345826-10345845 | MS.gene58761:CDS | 35.0% |
!!! | TGTTTTGATTCTTCTTGTGG+TGG | - | chr8.1:10347048-10347067 | MS.gene58761:CDS | 35.0% |
AAGAAGGATTTGATGGAGCA+CGG | + | chr8.1:10346436-10346455 | None:intergenic | 40.0% | |
AAGTAAGCATCCCATCTAGA+TGG | + | chr8.1:10346212-10346231 | None:intergenic | 40.0% | |
AAGTACAGAGTTGCAGAAAC+AGG | + | chr8.1:10347232-10347251 | None:intergenic | 40.0% | |
AATCTAGGTGAGCTTCTCAT+GGG | - | chr8.1:10345618-10345637 | MS.gene58761:CDS | 40.0% | |
AATTGAGGATCGAGAACCAA+TGG | + | chr8.1:10346256-10346275 | None:intergenic | 40.0% | |
ATATCAAGTGGCCATCTAGA+TGG | - | chr8.1:10346198-10346217 | MS.gene58761:CDS | 40.0% | |
ATCATGTCCAGCATTTGGAT+GGG | - | chr8.1:10346992-10347011 | MS.gene58761:CDS | 40.0% | |
ATGATACTTGGTATTGCTGC+TGG | - | chr8.1:10346587-10346606 | MS.gene58761:CDS | 40.0% | |
ATGGGATGCTTACTTGAAGA+TGG | - | chr8.1:10346217-10346236 | MS.gene58761:CDS | 40.0% | |
CAAGATTGTGAGGATGAAGA+AGG | + | chr8.1:10346711-10346730 | None:intergenic | 40.0% | |
CAGATGAATGAGGAGTTATC+TGG | - | chr8.1:10346383-10346402 | MS.gene58761:CDS | 40.0% | |
CAGTTATGAGGAGCTTGATA+AGG | - | chr8.1:10346349-10346368 | MS.gene58761:CDS | 40.0% | |
CCCTGTTGGTATTAAGATTC+AGG | - | chr8.1:10345851-10345870 | MS.gene58761:CDS | 40.0% | |
CTCAATGAAAAGGGTTCCAA+AGG | + | chr8.1:10346963-10346982 | None:intergenic | 40.0% | |
CTTATCAAGCTCCTCATAAC+TGG | + | chr8.1:10346351-10346370 | None:intergenic | 40.0% | |
CTTCTTGAGAACTGTTAGGA+GGG | - | chr8.1:10346319-10346338 | MS.gene58761:CDS | 40.0% | |
GATGCTTACTTGAAGATGGA+GGG | - | chr8.1:10346221-10346240 | MS.gene58761:CDS | 40.0% | |
GTGGCAATGCCTATTAAAGA+AGG | - | chr8.1:10346131-10346150 | MS.gene58761:CDS | 40.0% | |
GTTATGTTTCAGTTCGACTG+TGG | - | chr8.1:10346609-10346628 | MS.gene58761:CDS | 40.0% | |
GTTTCTGCAACTCTGTACTT+GGG | - | chr8.1:10347232-10347251 | MS.gene58761:CDS | 40.0% | |
TAATTGTGTGGGTAACTACC+CGG | + | chr8.1:10345474-10345493 | None:intergenic | 40.0% | |
TACCTGTGATAAGTGTTCCA+CGG | + | chr8.1:10346553-10346572 | None:intergenic | 40.0% | |
TATCAAGTGGCCATCTAGAT+GGG | - | chr8.1:10346199-10346218 | MS.gene58761:CDS | 40.0% | |
TATCATGTCCAGCATTTGGA+TGG | - | chr8.1:10346991-10347010 | MS.gene58761:CDS | 40.0% | |
TCTCAGATCCTTCCTTAACA+GGG | + | chr8.1:10345986-10346005 | None:intergenic | 40.0% | |
TCTTCTTGAGAACTGTTAGG+AGG | - | chr8.1:10346318-10346337 | MS.gene58761:CDS | 40.0% | |
TGAATGAGGAGTTATCTGGT+TGG | - | chr8.1:10346387-10346406 | MS.gene58761:CDS | 40.0% | |
TGATCACCATCAACGAATTG+AGG | + | chr8.1:10346271-10346290 | None:intergenic | 40.0% | |
TGGAAATCATTCTTTGCCTC+TGG | - | chr8.1:10347136-10347155 | MS.gene58761:CDS | 40.0% | |
TTCTCAGATCCTTCCTTAAC+AGG | + | chr8.1:10345987-10346006 | None:intergenic | 40.0% | |
TTGAGGAGAGTGATATCAAG+TGG | - | chr8.1:10346186-10346205 | MS.gene58761:CDS | 40.0% | |
! | AAGGATAGTGCTGAGAATCT+AGG | - | chr8.1:10345603-10345622 | MS.gene58761:CDS | 40.0% |
! | CCTTTTTGTAAACCTCAAGG+GGG | - | chr8.1:10345576-10345595 | MS.gene58761:CDS | 40.0% |
! | GCCGTGTTTACTATGTTTTC+GGG | - | chr8.1:10347014-10347033 | MS.gene58761:CDS | 40.0% |
! | GGCCGTGTTTACTATGTTTT+CGG | - | chr8.1:10347013-10347032 | MS.gene58761:CDS | 40.0% |
! | GTGATGGAGTTCAGATTCTT+GGG | - | chr8.1:10346474-10346493 | MS.gene58761:CDS | 40.0% |
! | TAAATGTGATCCATCGACTG+TGG | - | chr8.1:10346112-10346131 | MS.gene58761:CDS | 40.0% |
! | TACTTTGGCTTCCCCATAAT+AGG | + | chr8.1:10346739-10346758 | None:intergenic | 40.0% |
! | TGTTTCTGCAACTCTGTACT+TGG | - | chr8.1:10347231-10347250 | MS.gene58761:CDS | 40.0% |
! | TTGGTGTTTCAATCAGGGTA+TGG | - | chr8.1:10345438-10345457 | MS.gene58761:CDS | 40.0% |
!! | CATGGTTCTAGCAATCATGT+TGG | - | chr8.1:10347267-10347286 | MS.gene58761:CDS | 40.0% |
!! | GGAATTTGGTTGGTTCTAAC+AGG | + | chr8.1:10346878-10346897 | None:intergenic | 40.0% |
!! | TGGTTCTAACAGGATACTCA+AGG | + | chr8.1:10346868-10346887 | None:intergenic | 40.0% |
!!! | GAGTACTTTTTGAGATGGAC+TGG | - | chr8.1:10345825-10345844 | MS.gene58761:CDS | 40.0% |
AACTTACATGCACCTCTGTG+TGG | - | chr8.1:10347096-10347115 | MS.gene58761:CDS | 45.0% | |
ACACGAACCAGAATGAAGAG+AGG | + | chr8.1:10347312-10347331 | None:intergenic | 45.0% | |
ACCAATGTGGCTCGTGTTAT+GGG | - | chr8.1:10345933-10345952 | MS.gene58761:CDS | 45.0% | |
ACCTGTGATAAGTGTTCCAC+GGG | + | chr8.1:10346552-10346571 | None:intergenic | 45.0% | |
AGCCACCAACAAGTGTAAGT+GGG | + | chr8.1:10346823-10346842 | None:intergenic | 45.0% | |
AGCTCAAGCACAGATGAATG+AGG | - | chr8.1:10346373-10346392 | MS.gene58761:CDS | 45.0% | |
AGGATGAAGAAGGCAATACC+GGG | + | chr8.1:10346701-10346720 | None:intergenic | 45.0% | |
AGGGTATGGTTTCTACCTTC+CGG | - | chr8.1:10345452-10345471 | MS.gene58761:CDS | 45.0% | |
ATCTAGGTGAGCTTCTCATG+GGG | - | chr8.1:10345619-10345638 | MS.gene58761:CDS | 45.0% | |
ATGATTCCCCCTGTTAAGGA+AGG | - | chr8.1:10345975-10345994 | MS.gene58761:CDS | 45.0% | |
ATGGAATGGCTCCTGTACTT+TGG | + | chr8.1:10346754-10346773 | None:intergenic | 45.0% | |
ATGGTGATCACTTTCCTTGC+TGG | - | chr8.1:10346281-10346300 | MS.gene58761:CDS | 45.0% | |
CCCCCTTGAGGTTTACAAAA+AGG | + | chr8.1:10345579-10345598 | None:intergenic | 45.0% | |
CCTAGAACTAAAAGCCACGA+CGG | + | chr8.1:10346926-10346945 | None:intergenic | 45.0% | |
CTAACAGGATACTCAAGGTG+AGG | + | chr8.1:10346863-10346882 | None:intergenic | 45.0% | |
CTAGAGAAATTCCTCAGCAG+CGG | - | chr8.1:10346897-10346916 | MS.gene58761:CDS | 45.0% | |
CTCAGATCCTTCCTTAACAG+GGG | + | chr8.1:10345985-10346004 | None:intergenic | 45.0% | |
CTCGATCCTCAATTCGTTGA+TGG | - | chr8.1:10346262-10346281 | MS.gene58761:CDS | 45.0% | |
CTGGGTCATGGCTATTTGTT+TGG | - | chr8.1:10345419-10345438 | MS.gene58761:CDS | 45.0% | |
CTTGGGATACTCACTCTTCA+TGG | - | chr8.1:10347249-10347268 | MS.gene58761:CDS | 45.0% | |
GAAAAGGGTTCCAAAGGGAA+GGG | + | chr8.1:10346957-10346976 | None:intergenic | 45.0% | |
GAATCTAGGTGAGCTTCTCA+TGG | - | chr8.1:10345617-10345636 | MS.gene58761:CDS | 45.0% | |
GAGGATGAAGAAGGCAATAC+CGG | + | chr8.1:10346702-10346721 | None:intergenic | 45.0% | |
GGATCGAGAATTCGCCTTAT+AGG | - | chr8.1:10345646-10345665 | MS.gene58761:CDS | 45.0% | |
GGATGCTTACTTGAAGATGG+AGG | - | chr8.1:10346220-10346239 | MS.gene58761:CDS | 45.0% | |
GTACATGGTTGTTGGGTTTG+AGG | - | chr8.1:10346013-10346032 | MS.gene58761:CDS | 45.0% | |
GTTATCTGGTTGGAAGCTTG+TGG | - | chr8.1:10346397-10346416 | MS.gene58761:CDS | 45.0% | |
TAAGGAAGGATCTGAGAAGC+CGG | - | chr8.1:10345989-10346008 | MS.gene58761:CDS | 45.0% | |
TACCTACGAGGTAACGTTTG+AGG | - | chr8.1:10346169-10346188 | MS.gene58761:CDS | 45.0% | |
TAGCCACCAACAAGTGTAAG+TGG | + | chr8.1:10346824-10346843 | None:intergenic | 45.0% | |
TCAGATCCTTCCTTAACAGG+GGG | + | chr8.1:10345984-10346003 | None:intergenic | 45.0% | |
TCTGTCCCACTTACACTTGT+TGG | - | chr8.1:10346815-10346834 | MS.gene58761:CDS | 45.0% | |
TGAAAAGGGTTCCAAAGGGA+AGG | + | chr8.1:10346958-10346977 | None:intergenic | 45.0% | |
TGAGATGATTCCCCCTGTTA+AGG | - | chr8.1:10345971-10345990 | MS.gene58761:CDS | 45.0% | |
TGCACTTGGATTCATGTCAC+CGG | - | chr8.1:10346523-10346542 | MS.gene58761:CDS | 45.0% | |
TGGAGTTCAGATTCTTGGGA+TGG | - | chr8.1:10346478-10346497 | MS.gene58761:CDS | 45.0% | |
TTATGGGGAAGCCAAAGTAC+AGG | - | chr8.1:10346740-10346759 | MS.gene58761:CDS | 45.0% | |
TTGGGTTCCTCTCTTCATTC+TGG | - | chr8.1:10347302-10347321 | MS.gene58761:CDS | 45.0% | |
! | AAAGCTGCTTGTTTCTTCCC+CGG | - | chr8.1:10346680-10346699 | MS.gene58761:CDS | 45.0% |
! | GATCGAGAACCAATGGACTT+TGG | + | chr8.1:10346249-10346268 | None:intergenic | 45.0% |
! | TGGTGATGAATTGTCGGTGA+AGG | - | chr8.1:10345500-10345519 | MS.gene58761:CDS | 45.0% |
!! | ACACTTGTTGGTGGCTACTT+TGG | - | chr8.1:10346827-10346846 | MS.gene58761:CDS | 45.0% |
!! | CTAGCAATCATGTTGGTGAC+AGG | - | chr8.1:10347274-10347293 | MS.gene58761:CDS | 45.0% |
!! | GGTGATGGAGTTCAGATTCT+TGG | - | chr8.1:10346473-10346492 | MS.gene58761:CDS | 45.0% |
!! | TAAACCTCAAGGGGGTGTTA+AGG | - | chr8.1:10345584-10345603 | MS.gene58761:CDS | 45.0% |
!!! | TGGCTTTTAGTTCTAGGTGC+TGG | - | chr8.1:10346929-10346948 | MS.gene58761:CDS | 45.0% |
AACCCAACAACCATGTACCC+CGG | + | chr8.1:10346011-10346030 | None:intergenic | 50.0% | |
AAGGAAGGATCTGAGAAGCC+GGG | - | chr8.1:10345990-10346009 | MS.gene58761:CDS | 50.0% | |
AATCATCTCAGCCGCATCAC+CGG | + | chr8.1:10345961-10345980 | None:intergenic | 50.0% | |
ACCTCGTAGGTAAACGCAAG+CGG | + | chr8.1:10346161-10346180 | None:intergenic | 50.0% | |
AGGGTTGGGTTTCAGTTGCA+TGG | - | chr8.1:10346657-10346676 | MS.gene58761:CDS | 50.0% | |
ATCTCCAATCCTCCACACAG+AGG | + | chr8.1:10347111-10347130 | None:intergenic | 50.0% | |
ATCTGGTTGGAAGCTTGTGG+TGG | - | chr8.1:10346400-10346419 | MS.gene58761:CDS | 50.0% | |
CGCTGCTGAGGAATTTCTCT+AGG | + | chr8.1:10346899-10346918 | None:intergenic | 50.0% | |
CTATCCTTAACACCCCCTTG+AGG | + | chr8.1:10345591-10345610 | None:intergenic | 50.0% | |
CTCCTCAAACGTTACCTCGT+AGG | + | chr8.1:10346174-10346193 | None:intergenic | 50.0% | |
GACCAATGTGGCTCGTGTTA+TGG | - | chr8.1:10345932-10345951 | MS.gene58761:CDS | 50.0% | |
GAGAACTGTTAGGAGGGATC+TGG | - | chr8.1:10346325-10346344 | MS.gene58761:CDS | 50.0% | |
GGATGAAGAAGGCAATACCG+GGG | + | chr8.1:10346700-10346719 | None:intergenic | 50.0% | |
GGGTATGGTTTCTACCTTCC+GGG | - | chr8.1:10345453-10345472 | MS.gene58761:CDS | 50.0% | |
GTACAGTGCAACAGAACCAG+AGG | + | chr8.1:10347155-10347174 | None:intergenic | 50.0% | |
TCCCATAACACGAGCCACAT+TGG | + | chr8.1:10345937-10345956 | None:intergenic | 50.0% | |
TCCCGTGGAACACTTATCAC+AGG | - | chr8.1:10346548-10346567 | MS.gene58761:CDS | 50.0% | |
TCTAGGTGAGCTTCTCATGG+GGG | - | chr8.1:10345620-10345639 | MS.gene58761:CDS | 50.0% | |
TCTGGTTGGAAGCTTGTGGT+GGG | - | chr8.1:10346401-10346420 | MS.gene58761:CDS | 50.0% | |
TCTGTGTGGAGGATTGGAGA+TGG | - | chr8.1:10347110-10347129 | MS.gene58761:CDS | 50.0% | |
TGTGATAAGTGTTCCACGGG+AGG | + | chr8.1:10346549-10346568 | None:intergenic | 50.0% | |
TGTTATGGGAACCGGTGATG+CGG | - | chr8.1:10345947-10345966 | MS.gene58761:CDS | 50.0% | |
TTACATGCACCTCTGTGTGG+AGG | - | chr8.1:10347099-10347118 | MS.gene58761:CDS | 50.0% | |
! | ATAGGCATTGCCACAGTCGA+TGG | + | chr8.1:10346125-10346144 | None:intergenic | 50.0% |
! | GTCCCACTTACACTTGTTGG+TGG | - | chr8.1:10346818-10346837 | MS.gene58761:CDS | 50.0% |
! | TCTTGTGGTGGTTTGTGCTG+AGG | - | chr8.1:10347060-10347079 | MS.gene58761:CDS | 50.0% |
!! | AGCGGCTGGCCTTCTTTAAT+AGG | + | chr8.1:10346143-10346162 | None:intergenic | 50.0% |
!! | ATGTTGGTGACAGGCACAGT+TGG | - | chr8.1:10347283-10347302 | MS.gene58761:CDS | 50.0% |
!! | TGGTGGCTACTTTGGAGCAA+AGG | - | chr8.1:10346835-10346854 | MS.gene58761:CDS | 50.0% |
!! | TGTTGGTGACAGGCACAGTT+GGG | - | chr8.1:10347284-10347303 | MS.gene58761:CDS | 50.0% |
!!! | CCGTCGTGGCTTTTAGTTCT+AGG | - | chr8.1:10346923-10346942 | MS.gene58761:CDS | 50.0% |
AACACGGCCCATCCAAATGC+TGG | + | chr8.1:10347002-10347021 | None:intergenic | 55.0% | |
AAGCCGGGGTACATGGTTGT+TGG | - | chr8.1:10346005-10346024 | MS.gene58761:CDS | 55.0% | |
AGCCGGGGTACATGGTTGTT+GGG | - | chr8.1:10346006-10346025 | MS.gene58761:CDS | 55.0% | |
AGGAAGGATCTGAGAAGCCG+GGG | - | chr8.1:10345991-10346010 | MS.gene58761:CDS | 55.0% | |
ATAAGTGTTCCACGGGAGGC+CGG | + | chr8.1:10346545-10346564 | None:intergenic | 55.0% | |
ATCTGAGAAGCCGGGGTACA+TGG | - | chr8.1:10345998-10346017 | MS.gene58761:CDS | 55.0% | |
CTGGTTGGAAGCTTGTGGTG+GGG | - | chr8.1:10346402-10346421 | MS.gene58761:CDS | 55.0% | |
GAGGGATCTGGCCAGTTATG+AGG | - | chr8.1:10346337-10346356 | MS.gene58761:CDS | 55.0% | |
GTGAGCTTCTCATGGGGGAT+CGG | - | chr8.1:10345625-10345644 | MS.gene58761:CDS | 55.0% | |
GTGGCTCGTGTTATGGGAAC+CGG | - | chr8.1:10345939-10345958 | MS.gene58761:CDS | 55.0% | |
GTGTGGAGGATTGGAGATGG+TGG | - | chr8.1:10347113-10347132 | MS.gene58761:CDS | 55.0% | |
TGCACCTCTGTGTGGAGGAT+TGG | - | chr8.1:10347104-10347123 | MS.gene58761:CDS | 55.0% | |
TGGAGGGAGCCAAAGTCCAT+TGG | - | chr8.1:10346237-10346256 | MS.gene58761:CDS | 55.0% | |
TGGTTGGAAGCTTGTGGTGG+GGG | - | chr8.1:10346403-10346422 | MS.gene58761:CDS | 55.0% | |
TGTGTGGGTAACTACCCGGA+AGG | + | chr8.1:10345470-10345489 | None:intergenic | 55.0% | |
! | TGGAGGATTGGAGATGGTGG+TGG | - | chr8.1:10347116-10347135 | MS.gene58761:CDS | 55.0% |
!! | AGATGGACTGGGTACCCTGT+TGG | - | chr8.1:10345837-10345856 | MS.gene58761:CDS | 55.0% |
CGTAGGTAAACGCAAGCGGC+TGG | + | chr8.1:10346157-10346176 | None:intergenic | 60.0% | |
CTGTGGAGAACACTCGCGTG+CGG | - | chr8.1:10346626-10346645 | MS.gene58761:CDS | 60.0% | |
GCCGCTTGCGTTTACCTACG+AGG | - | chr8.1:10346157-10346176 | MS.gene58761:CDS | 60.0% | |
GTGCGGCGATCAGAAGGGTT+GGG | - | chr8.1:10346643-10346662 | MS.gene58761:CDS | 60.0% | |
ACTCGCGTGCGGCGATCAGA+AGG | - | chr8.1:10346637-10346656 | MS.gene58761:CDS | 65.0% | |
CACGACGGATACCGCTGCTG+AGG | + | chr8.1:10346911-10346930 | None:intergenic | 65.0% | |
CGTGCGGCGATCAGAAGGGT+TGG | - | chr8.1:10346642-10346661 | MS.gene58761:CDS | 65.0% | |
CTCAGCAGCGGTATCCGTCG+TGG | - | chr8.1:10346909-10346928 | MS.gene58761:CDS | 65.0% | |
CTCGCGTGCGGCGATCAGAA+GGG | - | chr8.1:10346638-10346657 | MS.gene58761:CDS | 65.0% | |
TTCATGTCACCGGCCTCCCG+TGG | - | chr8.1:10346533-10346552 | MS.gene58761:CDS | 65.0% | |
!! | GGTGCTGGCACCCTTCCCTT+TGG | - | chr8.1:10346944-10346963 | MS.gene58761:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 10345393 | 10347363 | 10345393 | ID=MS.gene58761 |
chr8.1 | mRNA | 10345393 | 10347363 | 10345393 | ID=MS.gene58761.t1;Parent=MS.gene58761 |
chr8.1 | exon | 10345393 | 10347363 | 10345393 | ID=MS.gene58761.t1.exon1;Parent=MS.gene58761.t1 |
chr8.1 | CDS | 10345393 | 10347363 | 10345393 | ID=cds.MS.gene58761.t1;Parent=MS.gene58761.t1 |
Gene Sequence |
Protein sequence |