Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75918.t1 | XP_003603595.1 | 95.7 | 713 | 25 | 3 | 1 | 708 | 1 | 712 | 0.00E+00 | 1155.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75918.t1 | Q93YU8 | 30.9 | 787 | 434 | 16 | 1 | 686 | 1 | 778 | 1.6e-41 | 172.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75918.t1 | G7J2X7 | 95.7 | 713 | 25 | 3 | 1 | 708 | 1 | 712 | 0.0e+00 | 1155.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene75918 | 0.813343 | 2.69E-51 | -1.69E-46 |
| MS.gene050667 | MS.gene75918 | 0.811922 | 5.49E-51 | -1.69E-46 |
| MS.gene050874 | MS.gene75918 | 0.810552 | 1.09E-50 | -1.69E-46 |
| MS.gene050875 | MS.gene75918 | 0.837505 | 5.00E-57 | -1.69E-46 |
| MS.gene051025 | MS.gene75918 | 0.847644 | 1.01E-59 | -1.69E-46 |
| MS.gene051914 | MS.gene75918 | 0.877449 | 6.23E-69 | -1.69E-46 |
| MS.gene052143 | MS.gene75918 | 0.805219 | 1.48E-49 | -1.69E-46 |
| MS.gene052169 | MS.gene75918 | 0.857204 | 1.91E-62 | -1.69E-46 |
| MS.gene052209 | MS.gene75918 | 0.827618 | 1.42E-54 | -1.69E-46 |
| MS.gene052308 | MS.gene75918 | 0.850727 | 1.41E-60 | -1.69E-46 |
| MS.gene052367 | MS.gene75918 | 0.825093 | 5.66E-54 | -1.69E-46 |
| MS.gene053108 | MS.gene75918 | 0.816521 | 5.30E-52 | -1.69E-46 |
| MS.gene053173 | MS.gene75918 | 0.866851 | 2.11E-65 | -1.69E-46 |
| MS.gene053281 | MS.gene75918 | 0.803145 | 4.01E-49 | -1.69E-46 |
| MS.gene053348 | MS.gene75918 | 0.829849 | 4.09E-55 | -1.69E-46 |
| MS.gene054018 | MS.gene75918 | 0.812202 | 4.77E-51 | -1.69E-46 |
| MS.gene054459 | MS.gene75918 | 0.845401 | 4.16E-59 | -1.69E-46 |
| MS.gene054551 | MS.gene75918 | 0.856973 | 2.24E-62 | -1.69E-46 |
| MS.gene054593 | MS.gene75918 | 0.829127 | 6.12E-55 | -1.69E-46 |
| MS.gene054633 | MS.gene75918 | 0.845163 | 4.82E-59 | -1.69E-46 |
| MS.gene054662 | MS.gene75918 | 0.91031 | 2.16E-82 | -1.69E-46 |
| MS.gene054851 | MS.gene75918 | 0.807644 | 4.57E-50 | -1.69E-46 |
| MS.gene054941 | MS.gene75918 | 0.81962 | 1.06E-52 | -1.69E-46 |
| MS.gene055308 | MS.gene75918 | 0.834394 | 3.07E-56 | -1.69E-46 |
| MS.gene055578 | MS.gene75918 | 0.830246 | 3.27E-55 | -1.69E-46 |
| MS.gene055616 | MS.gene75918 | 0.80033 | 1.52E-48 | -1.69E-46 |
| MS.gene056041 | MS.gene75918 | 0.820267 | 7.51E-53 | -1.69E-46 |
| MS.gene05640 | MS.gene75918 | 0.869706 | 2.53E-66 | -1.69E-46 |
| MS.gene05652 | MS.gene75918 | 0.863944 | 1.73E-64 | -1.69E-46 |
| MS.gene056583 | MS.gene75918 | 0.80807 | 3.71E-50 | -1.69E-46 |
| MS.gene056618 | MS.gene75918 | 0.821665 | 3.58E-53 | -1.69E-46 |
| MS.gene057101 | MS.gene75918 | 0.81968 | 1.02E-52 | -1.69E-46 |
| MS.gene05732 | MS.gene75918 | 0.817296 | 3.55E-52 | -1.69E-46 |
| MS.gene057367 | MS.gene75918 | 0.897621 | 1.18E-76 | -1.69E-46 |
| MS.gene057458 | MS.gene75918 | 0.828872 | 7.06E-55 | -1.69E-46 |
| MS.gene057669 | MS.gene75918 | 0.855336 | 6.76E-62 | -1.69E-46 |
| MS.gene058128 | MS.gene75918 | 0.851022 | 1.16E-60 | -1.69E-46 |
| MS.gene058849 | MS.gene75918 | 0.803679 | 3.11E-49 | -1.69E-46 |
| MS.gene058853 | MS.gene75918 | 0.848578 | 5.61E-60 | -1.69E-46 |
| MS.gene05926 | MS.gene75918 | 0.802633 | 5.11E-49 | -1.69E-46 |
| MS.gene059553 | MS.gene75918 | 0.841203 | 5.48E-58 | -1.69E-46 |
| MS.gene05960 | MS.gene75918 | 0.817529 | 3.15E-52 | -1.69E-46 |
| MS.gene059616 | MS.gene75918 | 0.826929 | 2.07E-54 | -1.69E-46 |
| MS.gene060275 | MS.gene75918 | 0.821385 | 4.15E-53 | -1.69E-46 |
| MS.gene060291 | MS.gene75918 | 0.862155 | 6.19E-64 | -1.69E-46 |
| MS.gene06080 | MS.gene75918 | 0.804583 | 2.01E-49 | -1.69E-46 |
| MS.gene06093 | MS.gene75918 | 0.912651 | 1.53E-83 | -1.69E-46 |
| MS.gene061260 | MS.gene75918 | 0.826677 | 2.38E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75918.t1 | MTR_3g109450 | 97.195 | 713 | 14 | 3 | 1 | 708 | 1 | 712 | 0.0 | 1423 |
| MS.gene75918.t1 | MTR_2g102050 | 54.513 | 565 | 226 | 5 | 167 | 708 | 204 | 760 | 0.0 | 585 |
| MS.gene75918.t1 | MTR_4g012430 | 54.726 | 402 | 170 | 4 | 265 | 661 | 117 | 511 | 2.67e-145 | 434 |
| MS.gene75918.t1 | MTR_4g012430 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 2.12e-13 | 73.6 |
| MS.gene75918.t1 | MTR_8g006850 | 28.634 | 454 | 289 | 9 | 273 | 702 | 279 | 721 | 1.32e-53 | 197 |
| MS.gene75918.t1 | MTR_8g006850 | 55.932 | 59 | 26 | 0 | 1 | 59 | 1 | 59 | 3.89e-14 | 76.6 |
| MS.gene75918.t1 | MTR_5g022530 | 28.903 | 474 | 290 | 9 | 247 | 696 | 181 | 631 | 1.49e-52 | 193 |
| MS.gene75918.t1 | MTR_7g081705 | 28.728 | 456 | 290 | 6 | 267 | 702 | 401 | 841 | 6.12e-52 | 194 |
| MS.gene75918.t1 | MTR_7g081705 | 57.627 | 59 | 25 | 0 | 1 | 59 | 1 | 59 | 2.16e-14 | 77.4 |
| MS.gene75918.t1 | MTR_2g048360 | 29.247 | 465 | 300 | 9 | 251 | 698 | 179 | 631 | 6.24e-46 | 174 |
| MS.gene75918.t1 | MTR_4g127620 | 26.183 | 676 | 396 | 20 | 1 | 587 | 1 | 662 | 7.14e-46 | 175 |
| MS.gene75918.t1 | MTR_1g112850 | 26.755 | 527 | 331 | 12 | 211 | 707 | 236 | 737 | 5.52e-45 | 172 |
| MS.gene75918.t1 | MTR_8g091250 | 26.418 | 670 | 368 | 22 | 1 | 592 | 1 | 623 | 6.07e-42 | 163 |
| MS.gene75918.t1 | MTR_3g078830 | 25.036 | 703 | 388 | 25 | 1 | 586 | 1 | 681 | 1.78e-40 | 159 |
| MS.gene75918.t1 | MTR_3g088190 | 24.009 | 454 | 307 | 7 | 273 | 697 | 456 | 900 | 5.70e-33 | 136 |
| MS.gene75918.t1 | MTR_5g087740 | 27.184 | 412 | 218 | 11 | 271 | 630 | 308 | 689 | 1.48e-30 | 129 |
| MS.gene75918.t1 | MTR_5g098980 | 25.060 | 419 | 276 | 7 | 284 | 693 | 367 | 756 | 3.01e-30 | 127 |
| MS.gene75918.t1 | MTR_3g115120 | 23.007 | 439 | 287 | 10 | 270 | 696 | 280 | 679 | 4.85e-26 | 114 |
| MS.gene75918.t1 | MTR_2g036920 | 28.269 | 283 | 161 | 7 | 271 | 521 | 503 | 775 | 7.11e-25 | 111 |
| MS.gene75918.t1 | MTR_2g036920 | 44.048 | 84 | 40 | 3 | 1 | 78 | 1 | 83 | 1.69e-12 | 71.6 |
| MS.gene75918.t1 | MTR_2g036920 | 26.437 | 348 | 211 | 9 | 271 | 584 | 474 | 810 | 7.79e-25 | 110 |
| MS.gene75918.t1 | MTR_2g036920 | 44.048 | 84 | 40 | 3 | 1 | 78 | 1 | 83 | 1.43e-12 | 71.6 |
| MS.gene75918.t1 | MTR_3g096950 | 24.217 | 351 | 250 | 5 | 354 | 697 | 434 | 775 | 5.53e-21 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75918.t1 | AT5G25590 | 57.106 | 774 | 262 | 16 | 1 | 707 | 1 | 771 | 0.0 | 729 |
| MS.gene75918.t1 | AT1G52320 | 62.585 | 441 | 163 | 1 | 258 | 696 | 313 | 753 | 0.0 | 568 |
| MS.gene75918.t1 | AT1G52320 | 62.585 | 441 | 163 | 1 | 258 | 696 | 336 | 776 | 0.0 | 568 |
| MS.gene75918.t1 | AT1G52320 | 62.585 | 441 | 163 | 1 | 258 | 696 | 336 | 776 | 0.0 | 568 |
| MS.gene75918.t1 | AT1G52320 | 62.670 | 442 | 161 | 3 | 258 | 696 | 10 | 450 | 0.0 | 566 |
| MS.gene75918.t1 | AT1G52320 | 62.670 | 442 | 161 | 3 | 258 | 696 | 10 | 450 | 0.0 | 566 |
| MS.gene75918.t1 | AT1G02110 | 28.964 | 473 | 294 | 7 | 252 | 702 | 249 | 701 | 4.41e-57 | 206 |
| MS.gene75918.t1 | AT1G02110 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 5.40e-13 | 72.8 |
| MS.gene75918.t1 | AT3G51290 | 29.730 | 444 | 284 | 5 | 273 | 704 | 202 | 629 | 9.67e-55 | 199 |
| MS.gene75918.t1 | AT3G51290 | 29.730 | 444 | 284 | 5 | 273 | 704 | 202 | 629 | 1.49e-54 | 201 |
| MS.gene75918.t1 | AT3G51290 | 29.279 | 444 | 280 | 6 | 273 | 704 | 202 | 623 | 3.05e-50 | 186 |
| MS.gene75918.t1 | AT3G60320 | 29.128 | 436 | 285 | 9 | 267 | 686 | 351 | 778 | 9.52e-47 | 178 |
| MS.gene75918.t1 | AT3G60320 | 46.847 | 111 | 55 | 2 | 1 | 111 | 1 | 107 | 7.78e-16 | 82.0 |
| MS.gene75918.t1 | AT2G27090 | 25.215 | 698 | 402 | 20 | 1 | 601 | 1 | 675 | 2.42e-46 | 176 |
| MS.gene75918.t1 | AT2G27090 | 25.215 | 698 | 402 | 20 | 1 | 601 | 1 | 675 | 2.42e-46 | 176 |
| MS.gene75918.t1 | AT4G39790 | 26.783 | 631 | 362 | 20 | 1 | 574 | 9 | 596 | 2.44e-42 | 164 |
| MS.gene75918.t1 | AT2G34670 | 28.539 | 445 | 278 | 10 | 272 | 696 | 250 | 674 | 3.37e-39 | 154 |
| MS.gene75918.t1 | AT4G30130 | 25.150 | 668 | 392 | 21 | 1 | 587 | 1 | 641 | 1.15e-34 | 141 |
| MS.gene75918.t1 | AT4G30130 | 25.150 | 668 | 392 | 21 | 1 | 587 | 1 | 641 | 1.15e-34 | 141 |
| MS.gene75918.t1 | AT1G21740 | 24.038 | 520 | 342 | 10 | 211 | 697 | 443 | 942 | 1.50e-32 | 135 |
| MS.gene75918.t1 | AT1G77500 | 25.670 | 448 | 294 | 8 | 273 | 703 | 451 | 876 | 1.98e-31 | 132 |
| MS.gene75918.t1 | AT4G35240 | 26.364 | 330 | 216 | 6 | 275 | 590 | 423 | 739 | 2.10e-27 | 119 |
| MS.gene75918.t1 | AT4G35240 | 26.364 | 330 | 216 | 6 | 275 | 590 | 423 | 739 | 2.10e-27 | 119 |
| MS.gene75918.t1 | AT4G35240 | 26.364 | 330 | 216 | 6 | 275 | 590 | 423 | 739 | 2.20e-27 | 119 |
| MS.gene75918.t1 | AT4G35240 | 26.364 | 330 | 216 | 6 | 275 | 590 | 423 | 739 | 2.20e-27 | 119 |
| MS.gene75918.t1 | AT1G20530 | 23.304 | 575 | 359 | 18 | 1 | 559 | 1 | 509 | 8.80e-27 | 116 |
| MS.gene75918.t1 | AT2G34670 | 26.974 | 456 | 256 | 16 | 158 | 568 | 121 | 544 | 1.04e-24 | 109 |
| MS.gene75918.t1 | AT2G19090 | 26.571 | 350 | 214 | 6 | 271 | 587 | 385 | 724 | 3.71e-24 | 108 |
| MS.gene75918.t1 | AT2G17110 | 25.079 | 315 | 224 | 3 | 275 | 577 | 313 | 627 | 1.39e-23 | 106 |
| MS.gene75918.t1 | AT5G54480 | 23.358 | 411 | 268 | 12 | 293 | 696 | 345 | 715 | 3.39e-17 | 86.3 |
| MS.gene75918.t1 | AT4G30130 | 36.508 | 126 | 77 | 1 | 352 | 477 | 398 | 520 | 1.16e-14 | 77.8 |
| MS.gene75918.t1 | AT4G30130 | 36.508 | 126 | 77 | 1 | 352 | 477 | 398 | 520 | 1.16e-14 | 77.8 |
Find 165 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTATGGATATGGATAATA+TGG | 0.114095 | 3.3:+89961512 | MS.gene75918:CDS |
| GGGCTTGGATTGGTGGATTT+TGG | 0.116448 | 3.3:-89963596 | None:intergenic |
| GGCTTGGGATTATTTCTTTA+TGG | 0.126467 | 3.3:+89961497 | MS.gene75918:CDS |
| AAACTTGTTGCTCTTGTTAT+TGG | 0.151747 | 3.3:+89962726 | MS.gene75918:CDS |
| GCGCCATCTTCTCCTTCTTC+TGG | 0.159074 | 3.3:+89961429 | MS.gene75918:CDS |
| GGATTATTTCTTTATGGATA+TGG | 0.176860 | 3.3:+89961503 | MS.gene75918:CDS |
| CAAATTGTGACTCCCATTCT+TGG | 0.206075 | 3.3:-89963458 | None:intergenic |
| GCCTTCGCCGCCGGTCATTC+AGG | 0.243027 | 3.3:+89961078 | MS.gene75918:CDS |
| ATAACAAGAGCAACAAGTTT+TGG | 0.264787 | 3.3:-89962723 | None:intergenic |
| AGAAACACATGCCACTGTTT+TGG | 0.288622 | 3.3:+89962259 | MS.gene75918:CDS |
| GGTGAGAATGTTGATGTTAA+TGG | 0.289655 | 3.3:+89961591 | MS.gene75918:CDS |
| CCCTTCGTTGTAAATGCTTC+TGG | 0.304621 | 3.3:-89963806 | None:intergenic |
| CTCAACTTTCTCCGGTGTCT+TGG | 0.318035 | 3.3:-89961640 | None:intergenic |
| TTCTAATTTCGCTGATGGTC+GGG | 0.320744 | 3.3:+89961899 | MS.gene75918:CDS |
| ACAACTGAGAATCGCGAATA+TGG | 0.320972 | 3.3:-89962698 | None:intergenic |
| TCCAAAGGCGGTGGAGGTTT+AGG | 0.322625 | 3.3:-89961207 | None:intergenic |
| CGCCATCTTCTCCTTCTTCT+GGG | 0.323153 | 3.3:+89961430 | MS.gene75918:CDS |
| AACTTGTTGCTCTTGTTATT+GGG | 0.330220 | 3.3:+89962727 | MS.gene75918:CDS |
| GGAGGAAGAGATGAAGTTAA+AGG | 0.341872 | 3.3:+89963722 | MS.gene75918:CDS |
| TGAGGTTGATGTGTATAATA+AGG | 0.342260 | 3.3:+89961659 | MS.gene75918:CDS |
| TCCTAAACCTCCACCGCCTT+TGG | 0.343046 | 3.3:+89961206 | MS.gene75918:CDS |
| ATAATCCCAAGCCATGTTCT+TGG | 0.359746 | 3.3:-89961487 | None:intergenic |
| TGAGTTTAGAAGAGCAATTA+AGG | 0.371298 | 3.3:+89961758 | MS.gene75918:CDS |
| AGAGAAGCCGGTGAGAAATT+AGG | 0.374879 | 3.3:-89961261 | None:intergenic |
| TCAACTTTCTCCGGTGTCTT+GGG | 0.378191 | 3.3:-89961639 | None:intergenic |
| GGCGGAAGAGGCGGTGGAGG+AGG | 0.380266 | 3.3:-89961240 | None:intergenic |
| GAACATATTCTCCCACATAT+TGG | 0.386881 | 3.3:-89963316 | None:intergenic |
| GATGCCGCCACCGCCTTTGC+CGG | 0.392756 | 3.3:+89961461 | MS.gene75918:CDS |
| GCAGATTTCGCTAGCTCGTC+AGG | 0.404088 | 3.3:-89963654 | None:intergenic |
| ACGACCGCACCGTGCAGCTT+TGG | 0.406384 | 3.3:+89963427 | MS.gene75918:CDS |
| TGATATTTCTCAAGATCATA+AGG | 0.409383 | 3.3:+89963386 | MS.gene75918:CDS |
| GAAGAGGCGGTGGAGGAGGG+AGG | 0.409543 | 3.3:-89961236 | None:intergenic |
| GCTCGTAATGCCTTCGCCGC+CGG | 0.417087 | 3.3:+89961069 | MS.gene75918:CDS |
| GAGAAATATCAAGAGATTTG+AGG | 0.419497 | 3.3:-89963374 | None:intergenic |
| GAGAACTAAGAATCTGCATA+AGG | 0.420407 | 3.3:-89961797 | None:intergenic |
| TGAGCTCTTCCGCGCGCTAT+CGG | 0.425047 | 3.3:+89963998 | MS.gene75918:CDS |
| CTAAGATGCTTGAAGCTACT+AGG | 0.436626 | 3.3:+89961865 | MS.gene75918:CDS |
| ATCATCTCTTTCTAGATCAT+CGG | 0.445892 | 3.3:-89963832 | None:intergenic |
| CAAGCCATGTTCTTGGAATC+CGG | 0.447999 | 3.3:-89961480 | None:intergenic |
| GGTACCATTCTTCAAAAGCT+TGG | 0.451334 | 3.3:-89963785 | None:intergenic |
| TTGTTGAAGAGGTGGAAGAA+GGG | 0.456126 | 3.3:+89961367 | MS.gene75918:CDS |
| ATTCTAATTTCGCTGATGGT+CGG | 0.456595 | 3.3:+89961898 | MS.gene75918:CDS |
| CTTTCAGGATGGCCAATATG+TGG | 0.463738 | 3.3:+89963304 | MS.gene75918:intron |
| GATAGCGCGCGGAAGAGCTC+AGG | 0.466453 | 3.3:-89963996 | None:intergenic |
| ACAAACTGCTTCTCCGAGAT+CGG | 0.469741 | 3.3:-89963870 | None:intergenic |
| AAGATCGGCGGTGGAATTAG+TGG | 0.472783 | 3.3:+89961333 | MS.gene75918:CDS |
| TCATCTCTTTCTAGATCATC+GGG | 0.475608 | 3.3:-89963831 | None:intergenic |
| CGGATTCCAAGAACATGGCT+TGG | 0.478452 | 3.3:+89961481 | MS.gene75918:CDS |
| TATCATTCTAATTTCGCTGA+TGG | 0.478716 | 3.3:+89961894 | MS.gene75918:CDS |
| CATTCAAGGGTGTATCCAAT+GGG | 0.479178 | 3.3:+89962201 | MS.gene75918:CDS |
| ACATCCAAGCTCTTTATAGC+TGG | 0.481961 | 3.3:+89963508 | MS.gene75918:CDS |
| TTGGAATCCGGCAAAGGCGG+TGG | 0.482836 | 3.3:-89961468 | None:intergenic |
| TAAAGAAGGGCTTGGATTGG+TGG | 0.484719 | 3.3:-89963603 | None:intergenic |
| GGATTCCAAGAACATGGCTT+GGG | 0.486447 | 3.3:+89961482 | MS.gene75918:CDS |
| GAAATGTGAGGAAACTAGAA+AGG | 0.486729 | 3.3:+89963746 | MS.gene75918:CDS |
| ATTGTTGAAGAGGTGGAAGA+AGG | 0.490175 | 3.3:+89961366 | MS.gene75918:CDS |
| GATGAGATTGAGAATGAAGA+AGG | 0.491897 | 3.3:+89961558 | MS.gene75918:CDS |
| ATTGCCCACGCTCAAGGTGG+TGG | 0.492952 | 3.3:+89964065 | MS.gene75918:CDS |
| TTTGGAATGTAATCCAAGAA+TGG | 0.494175 | 3.3:+89963445 | MS.gene75918:CDS |
| TTAGGCGGAAGAGGCGGTGG+AGG | 0.494227 | 3.3:-89961243 | None:intergenic |
| GAATCCGGCAAAGGCGGTGG+CGG | 0.494775 | 3.3:-89961465 | None:intergenic |
| ATTGCTCTTCTAAACTCAGC+AGG | 0.495940 | 3.3:-89961753 | None:intergenic |
| GGCGCCAGTGTTGAATCATT+AGG | 0.496446 | 3.3:+89962591 | MS.gene75918:CDS |
| TTGGAATGTAATCCAAGAAT+GGG | 0.497192 | 3.3:+89963446 | MS.gene75918:CDS |
| CAGTTACAGCACCGCAAGAT+CGG | 0.497409 | 3.3:+89961318 | MS.gene75918:CDS |
| GGGAAGAGGTTCTTTGAATG+AGG | 0.498151 | 3.3:+89961533 | MS.gene75918:CDS |
| TCTAATTTCGCTGATGGTCG+GGG | 0.499933 | 3.3:+89961900 | MS.gene75918:CDS |
| AGAACTAAGAATCTGCATAA+GGG | 0.500689 | 3.3:-89961796 | None:intergenic |
| ACCTGAATGACCGGCGGCGA+AGG | 0.502395 | 3.3:-89961079 | None:intergenic |
| AAATTAGGCGGAAGAGGCGG+TGG | 0.507309 | 3.3:-89961246 | None:intergenic |
| GATTCTTCCAAAGGCGGTGG+AGG | 0.508145 | 3.3:-89961213 | None:intergenic |
| TGCAAGTGATAACATGGAAT+CGG | 0.508476 | 3.3:+89962177 | MS.gene75918:CDS |
| GCGGAAGAGGCGGTGGAGGA+GGG | 0.508892 | 3.3:-89961239 | None:intergenic |
| TTTATGGATATGGATAATAT+GGG | 0.509779 | 3.3:+89961513 | MS.gene75918:CDS |
| AATCATGCCATGCATAAAGA+AGG | 0.514400 | 3.3:-89963617 | None:intergenic |
| TCTTGTGTGTAAATGACTTA+CGG | 0.517302 | 3.3:-89962628 | None:intergenic |
| AAAGACGATCATACTTCAGC+AGG | 0.518195 | 3.3:+89963701 | MS.gene75918:CDS |
| CAGCACCGCAAGATCGGCGG+TGG | 0.518911 | 3.3:+89961324 | MS.gene75918:CDS |
| CGGTCATTCAGGTTATGCTA+TGG | 0.522813 | 3.3:+89961089 | MS.gene75918:CDS |
| GGTGAGAAATTAGGCGGAAG+AGG | 0.523496 | 3.3:-89961252 | None:intergenic |
| TGAGCCAGCTATAAAGAGCT+TGG | 0.525015 | 3.3:-89963512 | None:intergenic |
| GAAGGAGAAGATGGCGCGTG+AGG | 0.530503 | 3.3:-89961423 | None:intergenic |
| ACATCAACCTCAACTTTCTC+CGG | 0.530753 | 3.3:-89961648 | None:intergenic |
| TCATTCAAGGGTGTATCCAA+TGG | 0.533090 | 3.3:+89962200 | MS.gene75918:CDS |
| TCCAAGCCCTTCTTTATGCA+TGG | 0.533581 | 3.3:+89963610 | MS.gene75918:CDS |
| CTCCCAGAAGAAGGAGAAGA+TGG | 0.534623 | 3.3:-89961432 | None:intergenic |
| AAGTCGATTGCCCACGCTCA+AGG | 0.535916 | 3.3:+89964059 | MS.gene75918:CDS |
| AACATGGAATCGGTCATTCA+AGG | 0.539680 | 3.3:+89962187 | MS.gene75918:CDS |
| GGTGTATCCAATGGGGAGGG+TGG | 0.541152 | 3.3:+89962209 | MS.gene75918:CDS |
| GCCATGCATAAAGAAGGGCT+TGG | 0.543280 | 3.3:-89963611 | None:intergenic |
| CTTTATCACTGCAGAAAATG+AGG | 0.543457 | 3.3:-89963682 | None:intergenic |
| ATCACTTTACTCCCAGAAGA+AGG | 0.544452 | 3.3:-89961441 | None:intergenic |
| GATATGGATAATATGGGAAG+AGG | 0.547615 | 3.3:+89961519 | MS.gene75918:CDS |
| GGCGGTGGAATTAGTGGTGG+AGG | 0.549912 | 3.3:+89961339 | MS.gene75918:CDS |
| CCAGAAGCATTTACAACGAA+GGG | 0.551600 | 3.3:+89963806 | MS.gene75918:CDS |
| ACAGAGCGTTTGAGAGAAGC+CGG | 0.551771 | 3.3:-89961273 | None:intergenic |
| GGATCAGAATGAAGAGGCGG+TGG | 0.555414 | 3.3:-89961186 | None:intergenic |
| TTTGGACAAGTTGTTAGCAT+GGG | 0.555933 | 3.3:+89962277 | MS.gene75918:CDS |
| GCATAAAGAAGGGCTTGGAT+TGG | 0.556125 | 3.3:-89963606 | None:intergenic |
| AAGAGGCGGTGGAGGAGGGA+GGG | 0.557539 | 3.3:-89961235 | None:intergenic |
| TAATTCCACCGCCGATCTTG+CGG | 0.558644 | 3.3:-89961329 | None:intergenic |
| CATAGCATAACCTGAATGAC+CGG | 0.563400 | 3.3:-89961088 | None:intergenic |
| TGCTGTAACTGCAACGACAC+AGG | 0.563887 | 3.3:-89961306 | None:intergenic |
| AAATACAAACAATCCGATCT+CGG | 0.564703 | 3.3:+89963857 | MS.gene75918:CDS |
| ACATGGAATCGGTCATTCAA+GGG | 0.566506 | 3.3:+89962188 | MS.gene75918:CDS |
| TTCTTGGAATCCGGCAAAGG+CGG | 0.566851 | 3.3:-89961471 | None:intergenic |
| AGGGATTCTTCCAAAGGCGG+TGG | 0.573076 | 3.3:-89961216 | None:intergenic |
| AGTTTCGCCGTGAGCGTAGT+CGG | 0.573795 | 3.3:-89961139 | None:intergenic |
| TTTCAGGATGGCCAATATGT+GGG | 0.579247 | 3.3:+89963305 | MS.gene75918:intron |
| AATGAAGAAGGTGAAATTGA+AGG | 0.580423 | 3.3:+89961570 | MS.gene75918:CDS |
| TATTGTTGATATGCAGTCGA+TGG | 0.581443 | 3.3:+89962653 | MS.gene75918:CDS |
| GAAGAGGTGGAAGAAGGGAA+AGG | 0.581945 | 3.3:+89961372 | MS.gene75918:CDS |
| GGGAAAGGCGGTGATGCTGA+TGG | 0.584993 | 3.3:+89961387 | MS.gene75918:CDS |
| TGGAGGTGACATTGTTGAAG+AGG | 0.585814 | 3.3:+89961356 | MS.gene75918:CDS |
| GAAACTCTATGAAGAAGTCA+AGG | 0.586792 | 3.3:+89962304 | MS.gene75918:CDS |
| CGCACCACCACCTTGAGCGT+GGG | 0.587071 | 3.3:-89964069 | None:intergenic |
| GAGGTGGAAGAAGGGAAAGG+CGG | 0.588013 | 3.3:+89961375 | MS.gene75918:CDS |
| CCGCACCACCACCTTGAGCG+TGG | 0.589202 | 3.3:-89964070 | None:intergenic |
| GTAGTCGGAGAGAGCGGCGC+CGG | 0.592343 | 3.3:-89961124 | None:intergenic |
| GAGTCATGCAAGTGATAACA+TGG | 0.593246 | 3.3:+89962171 | MS.gene75918:CDS |
| CAGAAGCATTTACAACGAAG+GGG | 0.593582 | 3.3:+89963807 | MS.gene75918:CDS |
| AGGTGACATTGTTGAAGAGG+TGG | 0.593877 | 3.3:+89961359 | MS.gene75918:CDS |
| GGTGCGGTCGTAATGATGCT+TGG | 0.594455 | 3.3:-89963415 | None:intergenic |
| GGACTCAACAGTTTCTGAAG+TGG | 0.596338 | 3.3:+89962674 | MS.gene75918:CDS |
| CCACGCTCAAGGTGGTGGTG+CGG | 0.602808 | 3.3:+89964070 | MS.gene75918:CDS |
| ATGTTCTTGGAATCCGGCAA+AGG | 0.605757 | 3.3:-89961474 | None:intergenic |
| TCTTCCGCCTAATTTCTCAC+CGG | 0.608905 | 3.3:+89961254 | MS.gene75918:CDS |
| ATCATGCCATGCATAAAGAA+GGG | 0.611365 | 3.3:-89963616 | None:intergenic |
| GAAGTTAAAGGAGAAATGTG+AGG | 0.611782 | 3.3:+89963734 | MS.gene75918:CDS |
| AAACTAGAAAGGAATTCTTG+AGG | 0.618185 | 3.3:+89963757 | MS.gene75918:CDS |
| GGAGGGAGGGATTCTTCCAA+AGG | 0.620699 | 3.3:-89961222 | None:intergenic |
| CAAGGGTGTATCCAATGGGG+AGG | 0.622313 | 3.3:+89962205 | MS.gene75918:CDS |
| GCTCTCTCCGACTACGCTCA+CGG | 0.622545 | 3.3:+89961132 | MS.gene75918:CDS |
| ATCTGCATAAGGGTAACAGA+AGG | 0.622988 | 3.3:-89961786 | None:intergenic |
| ACCAGAAGCATTTACAACGA+AGG | 0.625698 | 3.3:+89963805 | MS.gene75918:CDS |
| CTGAACAAGCAGAAGAAGCG+TGG | 0.626103 | 3.3:+89962570 | MS.gene75918:CDS |
| TTTGCCGGATTCCAAGAACA+TGG | 0.627689 | 3.3:+89961476 | MS.gene75918:CDS |
| GACGATCATACTTCAGCAGG+AGG | 0.629306 | 3.3:+89963704 | MS.gene75918:CDS |
| ATCGGCGGTGGAATTAGTGG+TGG | 0.630858 | 3.3:+89961336 | MS.gene75918:CDS |
| TGAGATTGAACCCAAGACAC+CGG | 0.633573 | 3.3:+89961629 | MS.gene75918:CDS |
| GGAGCATGAACATGTACATG+AGG | 0.635866 | 3.3:+89961680 | MS.gene75918:CDS |
| GATTACATTCCAAAGCTGCA+CGG | 0.636378 | 3.3:-89963436 | None:intergenic |
| CAAGACACCGGAGAAAGTTG+AGG | 0.641109 | 3.3:+89961641 | MS.gene75918:CDS |
| TGAGGATGATGTGATAAGAG+AGG | 0.648109 | 3.3:+89961698 | MS.gene75918:CDS |
| GGCGGCGAAGGCATTACGAG+CGG | 0.649430 | 3.3:-89961067 | None:intergenic |
| GTGAGCGTAGTCGGAGAGAG+CGG | 0.649810 | 3.3:-89961130 | None:intergenic |
| GAGAAATTAGGCGGAAGAGG+CGG | 0.650849 | 3.3:-89961249 | None:intergenic |
| GGTTTAGGATCAGAATGAAG+AGG | 0.652248 | 3.3:-89961192 | None:intergenic |
| TTACAGCACCGCAAGATCGG+CGG | 0.652795 | 3.3:+89961321 | MS.gene75918:CDS |
| GAGAATGTTGATGTTAATGG+AGG | 0.660500 | 3.3:+89961594 | MS.gene75918:CDS |
| TGATGTTAATGGAGGACATG+TGG | 0.660982 | 3.3:+89961602 | MS.gene75918:CDS |
| AAGGGTGTATCCAATGGGGA+GGG | 0.663838 | 3.3:+89962206 | MS.gene75918:CDS |
| TGTTAATGGAGGACATGTGG+AGG | 0.675457 | 3.3:+89961605 | MS.gene75918:CDS |
| CATTCCAAAGCTGCACGGTG+CGG | 0.678361 | 3.3:-89963431 | None:intergenic |
| GAAGCCGGTGAGAAATTAGG+CGG | 0.684519 | 3.3:-89961258 | None:intergenic |
| GGGAGGGATTCTTCCAAAGG+CGG | 0.689716 | 3.3:-89961219 | None:intergenic |
| GTTTAGAAGAGCAATTAAGG+TGG | 0.690000 | 3.3:+89961761 | MS.gene75918:CDS |
| GAGTATAATCCGATAGCGCG+CGG | 0.690717 | 3.3:-89964007 | None:intergenic |
| TGTAACTGCAACGACACAGG+CGG | 0.699824 | 3.3:-89961303 | None:intergenic |
| AGAAGCATTTACAACGAAGG+GGG | 0.702303 | 3.3:+89963808 | MS.gene75918:CDS |
| TTAGGATCAGAATGAAGAGG+CGG | 0.705551 | 3.3:-89961189 | None:intergenic |
| AGCATAACCTGAATGACCGG+CGG | 0.709251 | 3.3:-89961085 | None:intergenic |
| TCGATTGCCCACGCTCAAGG+TGG | 0.713047 | 3.3:+89964062 | MS.gene75918:CDS |
| TAACAACTTGTCCAAAACAG+TGG | 0.715371 | 3.3:-89962270 | None:intergenic |
| ATTCAAGGGTGTATCCAATG+GGG | 0.730624 | 3.3:+89962202 | MS.gene75918:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTCTATAAAATTGTAAG+TGG | + | chr3.3:89962991-89963010 | MS.gene75918:intron | 15.0% |
| !! | TACAACATTAAAATAAACTT+CGG | - | chr3.3:89963104-89963123 | None:intergenic | 15.0% |
| !!! | CAATAAGTGAAATTTTAAAA+AGG | - | chr3.3:89962498-89962517 | None:intergenic | 15.0% |
| !! | ACTGAAGTTGAATAAAATAA+AGG | - | chr3.3:89961952-89961971 | None:intergenic | 20.0% |
| !! | TTTATGGATATGGATAATAT+GGG | + | chr3.3:89961513-89961532 | MS.gene75918:CDS | 20.0% |
| !!! | ATAATAAAATGCTTTTCGAT+TGG | - | chr3.3:89963023-89963042 | None:intergenic | 20.0% |
| !!! | CAACTAGAGTTTTAAAAAAA+AGG | - | chr3.3:89962057-89962076 | None:intergenic | 20.0% |
| !!! | GAAAGTATAAATGTCAAAAA+TGG | - | chr3.3:89962343-89962362 | None:intergenic | 20.0% |
| !!! | TAATAAAATGCTTTTCGATT+GGG | - | chr3.3:89963022-89963041 | None:intergenic | 20.0% |
| !!! | TAGAATATATTTTGCAACAT+CGG | - | chr3.3:89962979-89962998 | None:intergenic | 20.0% |
| ! | ATCATTAGGAAAAACTAAAG+CGG | + | chr3.3:89962605-89962624 | MS.gene75918:CDS | 25.0% |
| ! | CAAATATAGATTGAGAATCT+AGG | - | chr3.3:89963057-89963076 | None:intergenic | 25.0% |
| ! | CTTTATGGATATGGATAATA+TGG | + | chr3.3:89961512-89961531 | MS.gene75918:CDS | 25.0% |
| ! | TAAAATAAACTTCGGTATCT+AGG | - | chr3.3:89963096-89963115 | None:intergenic | 25.0% |
| ! | TGATATTTCTCAAGATCATA+AGG | + | chr3.3:89963386-89963405 | MS.gene75918:CDS | 25.0% |
| ! | TGATGCAAAAAATAGAAACT+TGG | - | chr3.3:89963238-89963257 | None:intergenic | 25.0% |
| !! | GGATTATTTCTTTATGGATA+TGG | + | chr3.3:89961503-89961522 | MS.gene75918:CDS | 25.0% |
| !!! | GAGTTTTAAAAAAAAGGTCT+AGG | - | chr3.3:89962051-89962070 | None:intergenic | 25.0% |
| !!! | TCTATTTTTTGCATCACAAA+TGG | + | chr3.3:89963242-89963261 | MS.gene75918:intron | 25.0% |
| !!! | TTTTCAATTTGTTCTGGTAT+TGG | + | chr3.3:89963170-89963189 | MS.gene75918:intron | 25.0% |
| AAACTAGAAAGGAATTCTTG+AGG | + | chr3.3:89963757-89963776 | MS.gene75918:CDS | 30.0% | |
| AAAGCTAACTAACAAGATGA+AGG | - | chr3.3:89962365-89962384 | None:intergenic | 30.0% | |
| AAATACAAACAATCCGATCT+CGG | + | chr3.3:89963857-89963876 | MS.gene75918:CDS | 30.0% | |
| AATGAAGAAGGTGAAATTGA+AGG | + | chr3.3:89961570-89961589 | MS.gene75918:CDS | 30.0% | |
| ACCAGAACAAATTGAAAACT+AGG | - | chr3.3:89963168-89963187 | None:intergenic | 30.0% | |
| AGAACTAAGAATCTGCATAA+GGG | - | chr3.3:89961799-89961818 | None:intergenic | 30.0% | |
| ATAGAAACTTGGTACTTGAT+TGG | - | chr3.3:89963227-89963246 | None:intergenic | 30.0% | |
| ATCATCTCTTTCTAGATCAT+CGG | - | chr3.3:89963835-89963854 | None:intergenic | 30.0% | |
| CAATTTGGATAATGACATCA+AGG | - | chr3.3:89962024-89962043 | None:intergenic | 30.0% | |
| CTAACATTCAAGACTAATTC+AGG | - | chr3.3:89962933-89962952 | None:intergenic | 30.0% | |
| CTAAGATATCAAATAAGCAC+AGG | - | chr3.3:89962795-89962814 | None:intergenic | 30.0% | |
| CTCTAGTTGTGTAAAGTTTA+AGG | + | chr3.3:89962068-89962087 | MS.gene75918:intron | 30.0% | |
| GAATCTACTTGATTTCTTTC+AGG | + | chr3.3:89963289-89963308 | MS.gene75918:intron | 30.0% | |
| GAGAAATATCAAGAGATTTG+AGG | - | chr3.3:89963377-89963396 | None:intergenic | 30.0% | |
| GTGCTTATTTGATATCTTAG+TGG | + | chr3.3:89962795-89962814 | MS.gene75918:intron | 30.0% | |
| TATCATTCTAATTTCGCTGA+TGG | + | chr3.3:89961894-89961913 | MS.gene75918:CDS | 30.0% | |
| TCAAGTAGATTCATGAATCA+TGG | - | chr3.3:89963281-89963300 | None:intergenic | 30.0% | |
| TCTTGTGTGTAAATGACTTA+CGG | - | chr3.3:89962631-89962650 | None:intergenic | 30.0% | |
| TGAGTTTAGAAGAGCAATTA+AGG | + | chr3.3:89961758-89961777 | MS.gene75918:CDS | 30.0% | |
| TGATGTCATTATCCAAATTG+CGG | + | chr3.3:89962024-89962043 | MS.gene75918:intron | 30.0% | |
| TGTAAAGTGACACGATTATT+AGG | - | chr3.3:89963135-89963154 | None:intergenic | 30.0% | |
| TTGGAATGTAATCCAAGAAT+GGG | + | chr3.3:89963446-89963465 | MS.gene75918:CDS | 30.0% | |
| ! | ATAACAAGAGCAACAAGTTT+TGG | - | chr3.3:89962726-89962745 | None:intergenic | 30.0% |
| ! | TTGGTGTGTTAGCAAAATTT+TGG | - | chr3.3:89963208-89963227 | None:intergenic | 30.0% |
| ! | TTGGTTAAAGGAAGTTTTCA+AGG | - | chr3.3:89962880-89962899 | None:intergenic | 30.0% |
| ! | TTTGGAATGTAATCCAAGAA+TGG | + | chr3.3:89963445-89963464 | MS.gene75918:CDS | 30.0% |
| ! | TTTTCCTAATGATTCAACAC+TGG | - | chr3.3:89962598-89962617 | None:intergenic | 30.0% |
| !! | AAAACCAAGCTTTTGAAGAA+TGG | + | chr3.3:89963781-89963800 | MS.gene75918:CDS | 30.0% |
| !! | AAACTTGTTGCTCTTGTTAT+TGG | + | chr3.3:89962726-89962745 | MS.gene75918:CDS | 30.0% |
| !! | AACTTGTTGCTCTTGTTATT+GGG | + | chr3.3:89962727-89962746 | MS.gene75918:CDS | 30.0% |
| !! | TAACTTGTTGCTCTTAATGA+GGG | + | chr3.3:89962468-89962487 | MS.gene75918:intron | 30.0% |
| !! | TCCTAGTTTTCAATTTGTTC+TGG | + | chr3.3:89963164-89963183 | MS.gene75918:intron | 30.0% |
| !! | TGAGGTTGATGTGTATAATA+AGG | + | chr3.3:89961659-89961678 | MS.gene75918:CDS | 30.0% |
| !!! | GAGACGAGATTTTTTCTTTT+AGG | - | chr3.3:89963566-89963585 | None:intergenic | 30.0% |
| !!! | GTTTAAGGTTTTTAGTTAGC+TGG | + | chr3.3:89962083-89962102 | MS.gene75918:intron | 30.0% |
| AATCATGCCATGCATAAAGA+AGG | - | chr3.3:89963620-89963639 | None:intergenic | 35.0% | |
| ATCATGCCATGCATAAAGAA+GGG | - | chr3.3:89963619-89963638 | None:intergenic | 35.0% | |
| ATTCTAATTTCGCTGATGGT+CGG | + | chr3.3:89961898-89961917 | MS.gene75918:CDS | 35.0% | |
| CTACTTGATTTCTTTCAGGA+TGG | + | chr3.3:89963293-89963312 | MS.gene75918:intron | 35.0% | |
| CTTTATCACTGCAGAAAATG+AGG | - | chr3.3:89963685-89963704 | None:intergenic | 35.0% | |
| GAAACTCTATGAAGAAGTCA+AGG | + | chr3.3:89962304-89962323 | MS.gene75918:CDS | 35.0% | |
| GAAATGTGAGGAAACTAGAA+AGG | + | chr3.3:89963746-89963765 | MS.gene75918:CDS | 35.0% | |
| GAACATATTCTCCCACATAT+TGG | - | chr3.3:89963319-89963338 | None:intergenic | 35.0% | |
| GAAGTTAAAGGAGAAATGTG+AGG | + | chr3.3:89963734-89963753 | MS.gene75918:CDS | 35.0% | |
| GAGAACTAAGAATCTGCATA+AGG | - | chr3.3:89961800-89961819 | None:intergenic | 35.0% | |
| GAGAATGTTGATGTTAATGG+AGG | + | chr3.3:89961594-89961613 | MS.gene75918:CDS | 35.0% | |
| GATATGGATAATATGGGAAG+AGG | + | chr3.3:89961519-89961538 | MS.gene75918:CDS | 35.0% | |
| GATGAGATTGAGAATGAAGA+AGG | + | chr3.3:89961558-89961577 | MS.gene75918:CDS | 35.0% | |
| GGTGAGAATGTTGATGTTAA+TGG | + | chr3.3:89961591-89961610 | MS.gene75918:CDS | 35.0% | |
| GTCCTAAATTTCATGCTTGT+TGG | + | chr3.3:89962907-89962926 | MS.gene75918:intron | 35.0% | |
| GTTTAGAAGAGCAATTAAGG+TGG | + | chr3.3:89961761-89961780 | MS.gene75918:CDS | 35.0% | |
| TAACAACTTGTCCAAAACAG+TGG | - | chr3.3:89962273-89962292 | None:intergenic | 35.0% | |
| TATTGTTGATATGCAGTCGA+TGG | + | chr3.3:89962653-89962672 | MS.gene75918:CDS | 35.0% | |
| TCATCTCTTTCTAGATCATC+GGG | - | chr3.3:89963834-89963853 | None:intergenic | 35.0% | |
| TGCAAGTGATAACATGGAAT+CGG | + | chr3.3:89962177-89962196 | MS.gene75918:CDS | 35.0% | |
| TTTGGACAAGTTGTTAGCAT+GGG | + | chr3.3:89962277-89962296 | MS.gene75918:CDS | 35.0% | |
| ! | ATATCTCTTTGACTTCCCAT+TGG | - | chr3.3:89962762-89962781 | None:intergenic | 35.0% |
| ! | ATTGGGTAAGTATTGCCAAT+GGG | + | chr3.3:89962744-89962763 | MS.gene75918:intron | 35.0% |
| ! | CTTCACGCATTAAGTTTTTG+CGG | - | chr3.3:89961041-89961060 | None:intergenic | 35.0% |
| ! | GAAATTTAGGACGTTGTCAT+TGG | - | chr3.3:89962899-89962918 | None:intergenic | 35.0% |
| ! | GGCTTGGGATTATTTCTTTA+TGG | + | chr3.3:89961497-89961516 | MS.gene75918:CDS | 35.0% |
| ! | TATTGGGTAAGTATTGCCAA+TGG | + | chr3.3:89962743-89962762 | MS.gene75918:intron | 35.0% |
| ! | TGATTTGCAATGACATTAGC+AGG | + | chr3.3:89962128-89962147 | MS.gene75918:intron | 35.0% |
| ! | TTTTGGACAAGTTGTTAGCA+TGG | + | chr3.3:89962276-89962295 | MS.gene75918:CDS | 35.0% |
| !! | GTAACTTGTTGCTCTTAATG+AGG | + | chr3.3:89962467-89962486 | MS.gene75918:intron | 35.0% |
| !! | GTTTTCAAGGAAGTTCACAA+CGG | - | chr3.3:89962867-89962886 | None:intergenic | 35.0% |
| !!! | GTGACCAAAGTTTTAAATCG+CGG | + | chr3.3:89961986-89962005 | MS.gene75918:intron | 35.0% |
| !!! | TCTTTTAGGTTGCTTTCGAT+GGG | - | chr3.3:89963552-89963571 | None:intergenic | 35.0% |
| !!! | TGACCAAAGTTTTAAATCGC+GGG | + | chr3.3:89961987-89962006 | MS.gene75918:intron | 35.0% |
| !!! | TTCTTTTAGGTTGCTTTCGA+TGG | - | chr3.3:89963553-89963572 | None:intergenic | 35.0% |
| AAAGACGATCATACTTCAGC+AGG | + | chr3.3:89963701-89963720 | MS.gene75918:CDS | 40.0% | |
| AACATGGAATCGGTCATTCA+AGG | + | chr3.3:89962187-89962206 | MS.gene75918:CDS | 40.0% | |
| ACAACTGAGAATCGCGAATA+TGG | - | chr3.3:89962701-89962720 | None:intergenic | 40.0% | |
| ACATCAACCTCAACTTTCTC+CGG | - | chr3.3:89961651-89961670 | None:intergenic | 40.0% | |
| ACATCCAAGCTCTTTATAGC+TGG | + | chr3.3:89963508-89963527 | MS.gene75918:CDS | 40.0% | |
| ACATGGAATCGGTCATTCAA+GGG | + | chr3.3:89962188-89962207 | MS.gene75918:CDS | 40.0% | |
| ATAATCCCAAGCCATGTTCT+TGG | - | chr3.3:89961490-89961509 | None:intergenic | 40.0% | |
| ATCACTTTACTCCCAGAAGA+AGG | - | chr3.3:89961444-89961463 | None:intergenic | 40.0% | |
| ATCTGCATAAGGGTAACAGA+AGG | - | chr3.3:89961789-89961808 | None:intergenic | 40.0% | |
| ATTGCTCTTCTAAACTCAGC+AGG | - | chr3.3:89961756-89961775 | None:intergenic | 40.0% | |
| ATTGTTGAAGAGGTGGAAGA+AGG | + | chr3.3:89961366-89961385 | MS.gene75918:CDS | 40.0% | |
| CAAATTGTGACTCCCATTCT+TGG | - | chr3.3:89963461-89963480 | None:intergenic | 40.0% | |
| CATAGCATAACCTGAATGAC+CGG | - | chr3.3:89961091-89961110 | None:intergenic | 40.0% | |
| CTAAGATGCTTGAAGCTACT+AGG | + | chr3.3:89961865-89961884 | MS.gene75918:CDS | 40.0% | |
| GAGTCATGCAAGTGATAACA+TGG | + | chr3.3:89962171-89962190 | MS.gene75918:CDS | 40.0% | |
| GATTACATTCCAAAGCTGCA+CGG | - | chr3.3:89963439-89963458 | None:intergenic | 40.0% | |
| GGAGGAAGAGATGAAGTTAA+AGG | + | chr3.3:89963722-89963741 | MS.gene75918:CDS | 40.0% | |
| GGCCAACAAGCATGAAATTT+AGG | - | chr3.3:89962912-89962931 | None:intergenic | 40.0% | |
| GGTACCATTCTTCAAAAGCT+TGG | - | chr3.3:89963788-89963807 | None:intergenic | 40.0% | |
| TAGAAAACACGACAGTACAG+TGG | - | chr3.3:89962415-89962434 | None:intergenic | 40.0% | |
| TGAGGATGATGTGATAAGAG+AGG | + | chr3.3:89961698-89961717 | MS.gene75918:CDS | 40.0% | |
| TGATGTTAATGGAGGACATG+TGG | + | chr3.3:89961602-89961621 | MS.gene75918:CDS | 40.0% | |
| TTAGCTGGAATTGACATGCA+AGG | + | chr3.3:89962098-89962117 | MS.gene75918:intron | 40.0% | |
| TTAGGATCAGAATGAAGAGG+CGG | - | chr3.3:89961192-89961211 | None:intergenic | 40.0% | |
| TTCACTTATTGTCGACAGCA+AGG | + | chr3.3:89962507-89962526 | MS.gene75918:intron | 40.0% | |
| TTCTAATTTCGCTGATGGTC+GGG | + | chr3.3:89961899-89961918 | MS.gene75918:CDS | 40.0% | |
| TTGTTGAAGAGGTGGAAGAA+GGG | + | chr3.3:89961367-89961386 | MS.gene75918:CDS | 40.0% | |
| TTTCAGGATGGCCAATATGT+GGG | + | chr3.3:89963305-89963324 | MS.gene75918:intron | 40.0% | |
| ! | AGAAACACATGCCACTGTTT+TGG | + | chr3.3:89962259-89962278 | MS.gene75918:CDS | 40.0% |
| ! | AGGACGTTGTCATTGGTTAA+AGG | - | chr3.3:89962892-89962911 | None:intergenic | 40.0% |
| ! | ATTCAAGGGTGTATCCAATG+GGG | + | chr3.3:89962202-89962221 | MS.gene75918:CDS | 40.0% |
| ! | CATTCAAGGGTGTATCCAAT+GGG | + | chr3.3:89962201-89962220 | MS.gene75918:CDS | 40.0% |
| ! | GGTCTGTAACTATTTTCAGC+TGG | - | chr3.3:89963356-89963375 | None:intergenic | 40.0% |
| ! | GGTTTAGGATCAGAATGAAG+AGG | - | chr3.3:89961195-89961214 | None:intergenic | 40.0% |
| ! | TCATTCAAGGGTGTATCCAA+TGG | + | chr3.3:89962200-89962219 | MS.gene75918:CDS | 40.0% |
| ! | TTGCAACATCGGTTACTACT+AGG | - | chr3.3:89962968-89962987 | None:intergenic | 40.0% |
| !! | ACCAGAAGCATTTACAACGA+AGG | + | chr3.3:89963805-89963824 | MS.gene75918:CDS | 40.0% |
| !! | AGAAGCATTTACAACGAAGG+GGG | + | chr3.3:89963808-89963827 | MS.gene75918:CDS | 40.0% |
| !! | CAGAAGCATTTACAACGAAG+GGG | + | chr3.3:89963807-89963826 | MS.gene75918:CDS | 40.0% |
| !! | CCAGAAGCATTTACAACGAA+GGG | + | chr3.3:89963806-89963825 | MS.gene75918:CDS | 40.0% |
| ACAAACTGCTTCTCCGAGAT+CGG | - | chr3.3:89963873-89963892 | None:intergenic | 45.0% | |
| AGAGAAGCCGGTGAGAAATT+AGG | - | chr3.3:89961264-89961283 | None:intergenic | 45.0% | |
| AGGTGACATTGTTGAAGAGG+TGG | + | chr3.3:89961359-89961378 | MS.gene75918:CDS | 45.0% | |
| ATCGGTTACTACTAGGATGC+TGG | - | chr3.3:89962961-89962980 | None:intergenic | 45.0% | |
| ATGTTCTTGGAATCCGGCAA+AGG | - | chr3.3:89961477-89961496 | None:intergenic | 45.0% | |
| CAAGCCATGTTCTTGGAATC+CGG | - | chr3.3:89961483-89961502 | None:intergenic | 45.0% | |
| CCCTTCGTTGTAAATGCTTC+TGG | - | chr3.3:89963809-89963828 | None:intergenic | 45.0% | |
| CTTTCAGGATGGCCAATATG+TGG | + | chr3.3:89963304-89963323 | MS.gene75918:intron | 45.0% | |
| GCATAAAGAAGGGCTTGGAT+TGG | - | chr3.3:89963609-89963628 | None:intergenic | 45.0% | |
| GCTATGGCTCTCAAAAACAC+CGG | + | chr3.3:89961105-89961124 | MS.gene75918:CDS | 45.0% | |
| GGAATTGACATGCAAGGTTG+AGG | + | chr3.3:89962104-89962123 | MS.gene75918:intron | 45.0% | |
| GGAGCATGAACATGTACATG+AGG | + | chr3.3:89961680-89961699 | MS.gene75918:CDS | 45.0% | |
| GGATTCCAAGAACATGGCTT+GGG | + | chr3.3:89961482-89961501 | MS.gene75918:CDS | 45.0% | |
| GGGAAGAGGTTCTTTGAATG+AGG | + | chr3.3:89961533-89961552 | MS.gene75918:CDS | 45.0% | |
| TCAACTTTCTCCGGTGTCTT+GGG | - | chr3.3:89961642-89961661 | None:intergenic | 45.0% | |
| TCCAAGCCCTTCTTTATGCA+TGG | + | chr3.3:89963610-89963629 | MS.gene75918:CDS | 45.0% | |
| TCTAATTTCGCTGATGGTCG+GGG | + | chr3.3:89961900-89961919 | MS.gene75918:CDS | 45.0% | |
| TCTTCCGCCTAATTTCTCAC+CGG | + | chr3.3:89961254-89961273 | MS.gene75918:CDS | 45.0% | |
| TGAGATTGAACCCAAGACAC+CGG | + | chr3.3:89961629-89961648 | MS.gene75918:CDS | 45.0% | |
| TGAGCCAGCTATAAAGAGCT+TGG | - | chr3.3:89963515-89963534 | None:intergenic | 45.0% | |
| TGGAGGTGACATTGTTGAAG+AGG | + | chr3.3:89961356-89961375 | MS.gene75918:CDS | 45.0% | |
| TGTTAATGGAGGACATGTGG+AGG | + | chr3.3:89961605-89961624 | MS.gene75918:CDS | 45.0% | |
| TTTGCCGGATTCCAAGAACA+TGG | + | chr3.3:89961476-89961495 | MS.gene75918:CDS | 45.0% | |
| ! | AAAGGTCTAGGACCGCAATT+TGG | - | chr3.3:89962039-89962058 | None:intergenic | 45.0% |
| ! | CGGTCATTCAGGTTATGCTA+TGG | + | chr3.3:89961089-89961108 | MS.gene75918:CDS | 45.0% |
| ! | GGACTCAACAGTTTCTGAAG+TGG | + | chr3.3:89962674-89962693 | MS.gene75918:CDS | 45.0% |
| ! | GTGCCCGCGATTTAAAACTT+TGG | - | chr3.3:89961993-89962012 | None:intergenic | 45.0% |
| ! | TAAAGAAGGGCTTGGATTGG+TGG | - | chr3.3:89963606-89963625 | None:intergenic | 45.0% |
| !!! | ATTGGTGGATTTTGGGCTCT+TGG | - | chr3.3:89963591-89963610 | None:intergenic | 45.0% |
| !!! | GGCTTGGATTGGTGGATTTT+GGG | - | chr3.3:89963598-89963617 | None:intergenic | 45.0% |
| AAGATCGGCGGTGGAATTAG+TGG | + | chr3.3:89961333-89961352 | MS.gene75918:CDS | 50.0% | |
| AGCATAACCTGAATGACCGG+CGG | - | chr3.3:89961088-89961107 | None:intergenic | 50.0% | |
| CAAGACACCGGAGAAAGTTG+AGG | + | chr3.3:89961641-89961660 | MS.gene75918:CDS | 50.0% | |
| CAGTTACAGCACCGCAAGAT+CGG | + | chr3.3:89961318-89961337 | MS.gene75918:CDS | 50.0% | |
| CGCCATCTTCTCCTTCTTCT+GGG | + | chr3.3:89961430-89961449 | MS.gene75918:CDS | 50.0% | |
| CGGATTCCAAGAACATGGCT+TGG | + | chr3.3:89961481-89961500 | MS.gene75918:CDS | 50.0% | |
| CTCAACTTTCTCCGGTGTCT+TGG | - | chr3.3:89961643-89961662 | None:intergenic | 50.0% | |
| CTCCCAGAAGAAGGAGAAGA+TGG | - | chr3.3:89961435-89961454 | None:intergenic | 50.0% | |
| CTGAACAAGCAGAAGAAGCG+TGG | + | chr3.3:89962570-89962589 | MS.gene75918:CDS | 50.0% | |
| GAAGAGGTGGAAGAAGGGAA+AGG | + | chr3.3:89961372-89961391 | MS.gene75918:CDS | 50.0% | |
| GAAGCCGGTGAGAAATTAGG+CGG | - | chr3.3:89961261-89961280 | None:intergenic | 50.0% | |
| GACGATCATACTTCAGCAGG+AGG | + | chr3.3:89963704-89963723 | MS.gene75918:CDS | 50.0% | |
| GAGAAATTAGGCGGAAGAGG+CGG | - | chr3.3:89961252-89961271 | None:intergenic | 50.0% | |
| GAGTATAATCCGATAGCGCG+CGG | - | chr3.3:89964010-89964029 | None:intergenic | 50.0% | |
| GCCATGCATAAAGAAGGGCT+TGG | - | chr3.3:89963614-89963633 | None:intergenic | 50.0% | |
| GGTGAGAAATTAGGCGGAAG+AGG | - | chr3.3:89961255-89961274 | None:intergenic | 50.0% | |
| TAATTCCACCGCCGATCTTG+CGG | - | chr3.3:89961332-89961351 | None:intergenic | 50.0% | |
| TGCTGTAACTGCAACGACAC+AGG | - | chr3.3:89961309-89961328 | None:intergenic | 50.0% | |
| TGTAACTGCAACGACACAGG+CGG | - | chr3.3:89961306-89961325 | None:intergenic | 50.0% | |
| TTCTTGGAATCCGGCAAAGG+CGG | - | chr3.3:89961474-89961493 | None:intergenic | 50.0% | |
| ! | AAGGGTGTATCCAATGGGGA+GGG | + | chr3.3:89962206-89962225 | MS.gene75918:CDS | 50.0% |
| ! | ACAGAGCGTTTGAGAGAAGC+CGG | - | chr3.3:89961276-89961295 | None:intergenic | 50.0% |
| ! | ATCTTTTCCACCCTCCCCAT+TGG | - | chr3.3:89962219-89962238 | None:intergenic | 50.0% |
| ! | GGCGCCAGTGTTGAATCATT+AGG | + | chr3.3:89962591-89962610 | MS.gene75918:CDS | 50.0% |
| !!! | GCAAGCGAGTTTTGAGACTC+TGG | - | chr3.3:89963977-89963996 | None:intergenic | 50.0% |
| !!! | GGGCTTGGATTGGTGGATTT+TGG | - | chr3.3:89963599-89963618 | None:intergenic | 50.0% |
| AAATTAGGCGGAAGAGGCGG+TGG | - | chr3.3:89961249-89961268 | None:intergenic | 55.0% | |
| AAGTCGATTGCCCACGCTCA+AGG | + | chr3.3:89964059-89964078 | MS.gene75918:CDS | 55.0% | |
| AGGGATTCTTCCAAAGGCGG+TGG | - | chr3.3:89961219-89961238 | None:intergenic | 55.0% | |
| AGTTTCGCCGTGAGCGTAGT+CGG | - | chr3.3:89961142-89961161 | None:intergenic | 55.0% | |
| ATCGGCGGTGGAATTAGTGG+TGG | + | chr3.3:89961336-89961355 | MS.gene75918:CDS | 55.0% | |
| CATTCCAAAGCTGCACGGTG+CGG | - | chr3.3:89963434-89963453 | None:intergenic | 55.0% | |
| GAGGTGGAAGAAGGGAAAGG+CGG | + | chr3.3:89961375-89961394 | MS.gene75918:CDS | 55.0% | |
| GATTCTTCCAAAGGCGGTGG+AGG | - | chr3.3:89961216-89961235 | None:intergenic | 55.0% | |
| GCAGATTTCGCTAGCTCGTC+AGG | - | chr3.3:89963657-89963676 | None:intergenic | 55.0% | |
| GCGCCATCTTCTCCTTCTTC+TGG | + | chr3.3:89961429-89961448 | MS.gene75918:CDS | 55.0% | |
| GGAGGGAGGGATTCTTCCAA+AGG | - | chr3.3:89961225-89961244 | None:intergenic | 55.0% | |
| GGATCAGAATGAAGAGGCGG+TGG | - | chr3.3:89961189-89961208 | None:intergenic | 55.0% | |
| GGGAGGGATTCTTCCAAAGG+CGG | - | chr3.3:89961222-89961241 | None:intergenic | 55.0% | |
| GGTGCGGTCGTAATGATGCT+TGG | - | chr3.3:89963418-89963437 | None:intergenic | 55.0% | |
| TCCAAAGGCGGTGGAGGTTT+AGG | - | chr3.3:89961210-89961229 | None:intergenic | 55.0% | |
| TCCTAAACCTCCACCGCCTT+TGG | + | chr3.3:89961206-89961225 | MS.gene75918:CDS | 55.0% | |
| TTACAGCACCGCAAGATCGG+CGG | + | chr3.3:89961321-89961340 | MS.gene75918:CDS | 55.0% | |
| ! | CAAGGGTGTATCCAATGGGG+AGG | + | chr3.3:89962205-89962224 | MS.gene75918:CDS | 55.0% |
| !! | GGTGGATTTTGGGCTCTTGG+CGG | - | chr3.3:89963588-89963607 | None:intergenic | 55.0% |
| ATTGCCCACGCTCAAGGTGG+TGG | + | chr3.3:89964065-89964084 | MS.gene75918:CDS | 60.0% | |
| GAAGGAGAAGATGGCGCGTG+AGG | - | chr3.3:89961426-89961445 | None:intergenic | 60.0% | |
| GCTCTCTCCGACTACGCTCA+CGG | + | chr3.3:89961132-89961151 | MS.gene75918:CDS | 60.0% | |
| GGCGGTGGAATTAGTGGTGG+AGG | + | chr3.3:89961339-89961358 | MS.gene75918:CDS | 60.0% | |
| GGGAAAGGCGGTGATGCTGA+TGG | + | chr3.3:89961387-89961406 | MS.gene75918:CDS | 60.0% | |
| GGTGTATCCAATGGGGAGGG+TGG | + | chr3.3:89962209-89962228 | MS.gene75918:CDS | 60.0% | |
| GTGAGCGTAGTCGGAGAGAG+CGG | - | chr3.3:89961133-89961152 | None:intergenic | 60.0% | |
| TCGATTGCCCACGCTCAAGG+TGG | + | chr3.3:89964062-89964081 | MS.gene75918:CDS | 60.0% | |
| TGAGCTCTTCCGCGCGCTAT+CGG | + | chr3.3:89963998-89964017 | MS.gene75918:CDS | 60.0% | |
| TTGGAATCCGGCAAAGGCGG+TGG | - | chr3.3:89961471-89961490 | None:intergenic | 60.0% | |
| AAGAGGCGGTGGAGGAGGGA+GGG | - | chr3.3:89961238-89961257 | None:intergenic | 65.0% | |
| ACCTGAATGACCGGCGGCGA+AGG | - | chr3.3:89961082-89961101 | None:intergenic | 65.0% | |
| ACGACCGCACCGTGCAGCTT+TGG | + | chr3.3:89963427-89963446 | MS.gene75918:CDS | 65.0% | |
| CGCACCACCACCTTGAGCGT+GGG | - | chr3.3:89964072-89964091 | None:intergenic | 65.0% | |
| GAATCCGGCAAAGGCGGTGG+CGG | - | chr3.3:89961468-89961487 | None:intergenic | 65.0% | |
| GATAGCGCGCGGAAGAGCTC+AGG | - | chr3.3:89963999-89964018 | None:intergenic | 65.0% | |
| GCTCGTAATGCCTTCGCCGC+CGG | + | chr3.3:89961069-89961088 | MS.gene75918:CDS | 65.0% | |
| TTAGGCGGAAGAGGCGGTGG+AGG | - | chr3.3:89961246-89961265 | None:intergenic | 65.0% | |
| ! | CCACGCTCAAGGTGGTGGTG+CGG | + | chr3.3:89964070-89964089 | MS.gene75918:CDS | 65.0% |
| !! | GGCGGCGAAGGCATTACGAG+CGG | - | chr3.3:89961070-89961089 | None:intergenic | 65.0% |
| CAGCACCGCAAGATCGGCGG+TGG | + | chr3.3:89961324-89961343 | MS.gene75918:CDS | 70.0% | |
| CCGCACCACCACCTTGAGCG+TGG | - | chr3.3:89964073-89964092 | None:intergenic | 70.0% | |
| GAAGAGGCGGTGGAGGAGGG+AGG | - | chr3.3:89961239-89961258 | None:intergenic | 70.0% | |
| GATGCCGCCACCGCCTTTGC+CGG | + | chr3.3:89961461-89961480 | MS.gene75918:CDS | 70.0% | |
| GCCTTCGCCGCCGGTCATTC+AGG | + | chr3.3:89961078-89961097 | MS.gene75918:CDS | 70.0% | |
| GCGGAAGAGGCGGTGGAGGA+GGG | - | chr3.3:89961242-89961261 | None:intergenic | 70.0% | |
| GTAGTCGGAGAGAGCGGCGC+CGG | - | chr3.3:89961127-89961146 | None:intergenic | 70.0% | |
| GGCGGAAGAGGCGGTGGAGG+AGG | - | chr3.3:89961243-89961262 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 89960982 | 89964097 | 89960982 | ID=MS.gene75918 |
| chr3.3 | mRNA | 89960982 | 89964097 | 89960982 | ID=MS.gene75918.t1;Parent=MS.gene75918 |
| chr3.3 | exon | 89960982 | 89961921 | 89960982 | ID=MS.gene75918.t1.exon1;Parent=MS.gene75918.t1 |
| chr3.3 | CDS | 89960982 | 89961921 | 89960982 | ID=cds.MS.gene75918.t1;Parent=MS.gene75918.t1 |
| chr3.3 | exon | 89962150 | 89962325 | 89962150 | ID=MS.gene75918.t1.exon2;Parent=MS.gene75918.t1 |
| chr3.3 | CDS | 89962150 | 89962325 | 89962150 | ID=cds.MS.gene75918.t1;Parent=MS.gene75918.t1 |
| chr3.3 | exon | 89962525 | 89962748 | 89962525 | ID=MS.gene75918.t1.exon3;Parent=MS.gene75918.t1 |
| chr3.3 | CDS | 89962525 | 89962748 | 89962525 | ID=cds.MS.gene75918.t1;Parent=MS.gene75918.t1 |
| chr3.3 | exon | 89963311 | 89964097 | 89963311 | ID=MS.gene75918.t1.exon4;Parent=MS.gene75918.t1 |
| chr3.3 | CDS | 89963311 | 89964097 | 89963311 | ID=cds.MS.gene75918.t1;Parent=MS.gene75918.t1 |
| Gene Sequence |
| Protein sequence |
