Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56130.t1 | XP_003621742.1 | 96.9 | 541 | 17 | 0 | 1 | 541 | 1 | 541 | 4.5e-309 | 1069.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56130.t1 | Q9C509 | 79.3 | 541 | 109 | 1 | 1 | 538 | 1 | 541 | 4.4e-257 | 888.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56130.t1 | G7KUR3 | 96.9 | 541 | 17 | 0 | 1 | 541 | 1 | 541 | 3.2e-309 | 1069.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052533 | MS.gene56130 | 0.807651 | 4.56E-50 | -1.69E-46 |
| MS.gene053272 | MS.gene56130 | -0.827046 | 1.94E-54 | -1.69E-46 |
| MS.gene054635 | MS.gene56130 | 0.806876 | 6.65E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene56130 | 0.801317 | 9.53E-49 | -1.69E-46 |
| MS.gene056363 | MS.gene56130 | 0.800375 | 1.48E-48 | -1.69E-46 |
| MS.gene056699 | MS.gene56130 | 0.803646 | 3.16E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene56130 | 0.820378 | 7.08E-53 | -1.69E-46 |
| MS.gene057148 | MS.gene56130 | -0.80933 | 2.00E-50 | -1.69E-46 |
| MS.gene057174 | MS.gene56130 | 0.817629 | 2.99E-52 | -1.69E-46 |
| MS.gene058781 | MS.gene56130 | 0.816574 | 5.16E-52 | -1.69E-46 |
| MS.gene059634 | MS.gene56130 | 0.810332 | 1.21E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene56130 | -0.812901 | 3.36E-51 | -1.69E-46 |
| MS.gene060522 | MS.gene56130 | 0.862327 | 5.48E-64 | -1.69E-46 |
| MS.gene060935 | MS.gene56130 | 0.805971 | 1.03E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene56130 | 0.812341 | 4.45E-51 | -1.69E-46 |
| MS.gene060962 | MS.gene56130 | 0.813607 | 2.35E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56130.t1 | MTR_7g022310 | 96.858 | 541 | 17 | 0 | 1 | 541 | 1 | 541 | 0.0 | 1092 |
| MS.gene56130.t1 | MTR_3g064740 | 25.549 | 364 | 239 | 12 | 157 | 499 | 81 | 433 | 6.58e-23 | 102 |
| MS.gene56130.t1 | MTR_5g077090 | 25.000 | 360 | 246 | 10 | 157 | 499 | 72 | 424 | 1.77e-22 | 101 |
| MS.gene56130.t1 | MTR_3g064740 | 26.453 | 344 | 221 | 12 | 177 | 499 | 6 | 338 | 3.84e-22 | 99.4 |
| MS.gene56130.t1 | MTR_6g075210 | 26.099 | 364 | 237 | 11 | 157 | 499 | 84 | 436 | 1.48e-19 | 92.0 |
| MS.gene56130.t1 | MTR_6g075210 | 27.241 | 290 | 193 | 7 | 222 | 499 | 20 | 303 | 4.43e-18 | 86.7 |
| MS.gene56130.t1 | MTR_6g075210 | 28.631 | 241 | 155 | 6 | 270 | 499 | 10 | 244 | 1.84e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56130.t1 | AT1G27980 | 79.298 | 541 | 109 | 1 | 1 | 538 | 1 | 541 | 0.0 | 877 |
| MS.gene56130.t1 | AT5G17330 | 26.111 | 360 | 242 | 10 | 157 | 499 | 81 | 433 | 6.32e-25 | 108 |
| MS.gene56130.t1 | AT3G17760 | 27.198 | 364 | 233 | 12 | 159 | 501 | 82 | 434 | 1.80e-24 | 107 |
| MS.gene56130.t1 | AT3G17760 | 27.198 | 364 | 233 | 12 | 159 | 501 | 82 | 434 | 1.80e-24 | 107 |
| MS.gene56130.t1 | AT1G65960 | 25.000 | 408 | 273 | 13 | 157 | 539 | 80 | 479 | 1.84e-22 | 101 |
| MS.gene56130.t1 | AT1G65960 | 26.036 | 338 | 223 | 10 | 222 | 539 | 20 | 350 | 3.50e-20 | 92.8 |
| MS.gene56130.t1 | AT1G65960 | 26.036 | 338 | 223 | 10 | 222 | 539 | 20 | 350 | 3.50e-20 | 92.8 |
| MS.gene56130.t1 | AT1G65960 | 26.036 | 338 | 223 | 10 | 222 | 539 | 20 | 350 | 3.50e-20 | 92.8 |
| MS.gene56130.t1 | AT2G02000 | 25.070 | 359 | 247 | 9 | 157 | 499 | 81 | 433 | 3.77e-20 | 94.0 |
| MS.gene56130.t1 | AT2G02010 | 25.556 | 360 | 244 | 10 | 157 | 499 | 81 | 433 | 1.12e-19 | 92.4 |
| MS.gene56130.t1 | AT2G02010 | 25.698 | 358 | 242 | 10 | 159 | 499 | 135 | 485 | 1.57e-19 | 92.4 |
Find 140 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACTTTCTAAGGGATTTAA+AGG | 0.202629 | 7.4:-79589390 | MS.gene56130:CDS |
| AATCAGATGGTAAATCTAAA+AGG | 0.224791 | 7.4:-79595765 | MS.gene56130:CDS |
| TCAGTGGATGTGCATAAATA+TGG | 0.239511 | 7.4:-79592561 | MS.gene56130:CDS |
| GGAAAATACAAAAGCAATTA+TGG | 0.264522 | 7.4:-79589812 | MS.gene56130:CDS |
| TTATTAGTGCCATACATTTC+AGG | 0.273871 | 7.4:+79593741 | None:intergenic |
| ACTTTACCTTTCTGATTTCA+TGG | 0.279906 | 7.4:+79592499 | None:intergenic |
| CATTCATTATACAGGTTACT+TGG | 0.296590 | 7.4:-79589833 | MS.gene56130:intron |
| GGTGCCAGTCCTCCAGTTAT+TGG | 0.300881 | 7.4:+79588304 | None:intergenic |
| TTTGGAGTTATTCATGATAA+AGG | 0.311735 | 7.4:-79597191 | MS.gene56130:CDS |
| CAGTTATTGAGGACTTTCTA+AGG | 0.314136 | 7.4:-79589400 | MS.gene56130:CDS |
| TAAAACAACACTTGTTCCTT+TGG | 0.317168 | 7.4:+79592530 | None:intergenic |
| GATATGACAATTGTGGCTTT+TGG | 0.319388 | 7.4:-79589648 | MS.gene56130:CDS |
| ATTGAAGAAACTTACTTTGA+TGG | 0.327875 | 7.4:+79593319 | None:intergenic |
| CAGTTAGTTGGATCTTCTCC+TGG | 0.331063 | 7.4:-79593365 | MS.gene56130:CDS |
| TCCTGGACCGTTCCTCTATC+TGG | 0.338146 | 7.4:+79588256 | None:intergenic |
| CATGTGGACCTTTGCCTTGG+TGG | 0.352680 | 7.4:-79593169 | MS.gene56130:CDS |
| GCAATGACAGCGGCACTTCT+TGG | 0.354449 | 7.4:-79593888 | MS.gene56130:CDS |
| CTTAGAAAGTCCTCAATAAC+TGG | 0.360250 | 7.4:+79589401 | None:intergenic |
| GAAAATCCTGGTCCAATAAC+TGG | 0.361743 | 7.4:-79588316 | MS.gene56130:CDS |
| GCACCAGCAATAAGGCTTCC+AGG | 0.364217 | 7.4:+79590025 | None:intergenic |
| CTGCCCATGCACCAGCAATA+AGG | 0.367297 | 7.4:+79590017 | None:intergenic |
| AAAAGCCACAATTGTCATAT+CGG | 0.368290 | 7.4:+79589650 | None:intergenic |
| GGAGGACTGGCACCTATATA+TGG | 0.375194 | 7.4:-79588295 | MS.gene56130:CDS |
| TCTTCTCCTGGGTTTCCTCA+TGG | 0.376026 | 7.4:-79593353 | MS.gene56130:CDS |
| CAATTTCTTCTGTAGGAACT+TGG | 0.377488 | 7.4:-79593223 | MS.gene56130:intron |
| AAAACAACACTTGTTCCTTT+GGG | 0.380643 | 7.4:+79592531 | None:intergenic |
| CCAGAGTGTTGTGCGCTTTG+AGG | 0.387309 | 7.4:-79593922 | MS.gene56130:CDS |
| AGTAAAATCATAAGGTTGAA+TGG | 0.392890 | 7.4:+79592605 | None:intergenic |
| CTACAGCATCAATTCGTTGC+AGG | 0.394221 | 7.4:-79590291 | MS.gene56130:intron |
| TCCAGGTCTGCTTCCAGCTA+TGG | 0.397299 | 7.4:+79590042 | None:intergenic |
| GTAAAATCATAAGGTTGAAT+GGG | 0.403589 | 7.4:+79592606 | None:intergenic |
| TAAAATCGACCAACAATTCC+TGG | 0.404074 | 7.4:+79588239 | None:intergenic |
| GAGTTGCCAAGCATGGGGTT+GGG | 0.404828 | 7.4:-79595727 | MS.gene56130:CDS |
| CATTTGATAATGCAGTTAGT+TGG | 0.408051 | 7.4:-79593377 | MS.gene56130:intron |
| TGCATTCAAATGCCAACCTT+TGG | 0.408261 | 7.4:+79589581 | None:intergenic |
| ACATACCAATCCCTTGCATT+TGG | 0.408812 | 7.4:-79593952 | MS.gene56130:CDS |
| TTGAAGAAACTTACTTTGAT+GGG | 0.414924 | 7.4:+79593320 | None:intergenic |
| CTTCTCCTGGGTTTCCTCAT+GGG | 0.417787 | 7.4:-79593352 | MS.gene56130:CDS |
| AGAAAAGAAATGATGCAGTT+TGG | 0.420327 | 7.4:-79595675 | MS.gene56130:CDS |
| ATTCCCGAGTTGTTTATCAT+TGG | 0.434818 | 7.4:-79589678 | MS.gene56130:CDS |
| GAAGCCTTATTGCTGGTGCA+TGG | 0.443699 | 7.4:-79590021 | MS.gene56130:CDS |
| ATTCCCCAGTCCAACCTGTT+GGG | 0.447758 | 7.4:+79589549 | None:intergenic |
| TTCCATGTGGACCTTTGCCT+TGG | 0.452562 | 7.4:-79593172 | MS.gene56130:CDS |
| TCTCTTCTCTCATTCTATCA+AGG | 0.456587 | 7.4:+79595695 | None:intergenic |
| TATGTATCTCCAACCATAGC+TGG | 0.457040 | 7.4:-79590055 | MS.gene56130:CDS |
| AGTTGCCAAGCATGGGGTTG+GGG | 0.457733 | 7.4:-79595726 | MS.gene56130:CDS |
| AGACCTGGAAGCCTTATTGC+TGG | 0.458765 | 7.4:-79590028 | MS.gene56130:CDS |
| TTCCCAGCGGCACCATATAT+AGG | 0.459272 | 7.4:+79588283 | None:intergenic |
| TATAGGATAATTCCTGAGTC+TGG | 0.461091 | 7.4:-79593655 | MS.gene56130:intron |
| ATCAGATGGTAAATCTAAAA+GGG | 0.464253 | 7.4:-79595764 | MS.gene56130:CDS |
| TGAGTAACTTCATACCATAA+TGG | 0.468667 | 7.4:+79593516 | None:intergenic |
| CCTTTAACAGTAAAATCATA+AGG | 0.471720 | 7.4:+79592597 | None:intergenic |
| GGCAGTAAAGAAAAGACATC+TGG | 0.474903 | 7.4:-79593867 | MS.gene56130:CDS |
| GCACCTATATATGGTGCCGC+TGG | 0.487752 | 7.4:-79588286 | MS.gene56130:CDS |
| ACCATAGCTGGAAGCAGACC+TGG | 0.488785 | 7.4:-79590043 | MS.gene56130:CDS |
| TTTATTTCTTGCAGTTACAT+TGG | 0.490125 | 7.4:-79595476 | MS.gene56130:intron |
| AGAGTTGCCAAGCATGGGGT+TGG | 0.490326 | 7.4:-79595728 | MS.gene56130:CDS |
| CAGATTGATCCCTGGTGTGA+AGG | 0.491686 | 7.4:-79596969 | MS.gene56130:CDS |
| AGGAACGGTCCAGGAATTGT+TGG | 0.494097 | 7.4:-79588248 | MS.gene56130:CDS |
| AAGACAGAGTTGCCAAGCAT+GGG | 0.494853 | 7.4:-79595733 | MS.gene56130:CDS |
| TGGGCAGCAATGATATCTCT+AGG | 0.498237 | 7.4:-79590001 | MS.gene56130:CDS |
| ATTTCTTGCAGTTACATTGG+AGG | 0.498427 | 7.4:-79595473 | MS.gene56130:intron |
| GATGTCCCCAACCCCATGCT+TGG | 0.499973 | 7.4:+79595721 | None:intergenic |
| TACCCAAGCTCACGAGCAAA+AGG | 0.500827 | 7.4:+79593136 | None:intergenic |
| TACATCCAAATGCAAGGGAT+TGG | 0.501298 | 7.4:+79593947 | None:intergenic |
| GTCACAGTTACTGAGTGGTC+TGG | 0.503646 | 7.4:-79590085 | MS.gene56130:intron |
| ATGCATTGCAGAGACCCAAC+AGG | 0.507957 | 7.4:-79589563 | MS.gene56130:intron |
| AAAGCCACAATTGTCATATC+GGG | 0.510282 | 7.4:+79589651 | None:intergenic |
| GCTGTAATGTCACACAGATA+TGG | 0.511194 | 7.4:+79589429 | None:intergenic |
| CCTCAAAGCGCACAACACTC+TGG | 0.516402 | 7.4:+79593922 | None:intergenic |
| ACAGCATGTACCAGTTATTG+AGG | 0.517336 | 7.4:-79589411 | MS.gene56130:CDS |
| AGTTAGTTGGATCTTCTCCT+GGG | 0.517683 | 7.4:-79593364 | MS.gene56130:CDS |
| TACATTGGAGGAGATGAGTC+TGG | 0.518337 | 7.4:-79595461 | MS.gene56130:CDS |
| GCCAGATAGAGGAACGGTCC+AGG | 0.518873 | 7.4:-79588257 | MS.gene56130:CDS |
| GGTCAACTAGCATCAAACTT+TGG | 0.523108 | 7.4:-79593202 | MS.gene56130:CDS |
| GTAAATCTAAAAGGGATGGT+TGG | 0.524550 | 7.4:-79595756 | MS.gene56130:CDS |
| TCTATATAACCCTTCACACC+AGG | 0.526561 | 7.4:+79596959 | None:intergenic |
| AAGCCTTATTGCTGGTGCAT+GGG | 0.527886 | 7.4:-79590020 | MS.gene56130:CDS |
| GTTTGGCAAGGCAAATGCTC+TGG | 0.531950 | 7.4:-79595658 | MS.gene56130:CDS |
| ATGATATCTCTAGGGAAAGA+AGG | 0.534425 | 7.4:-79589992 | MS.gene56130:intron |
| GACTATATGAAATCCAAGAA+AGG | 0.535174 | 7.4:-79593774 | MS.gene56130:CDS |
| AGTTATTGAGGACTTTCTAA+GGG | 0.535615 | 7.4:-79589399 | MS.gene56130:CDS |
| ATATGTGGCAACATGACATC+AGG | 0.537825 | 7.4:-79593837 | MS.gene56130:CDS |
| AGATTGATCCCTGGTGTGAA+GGG | 0.540818 | 7.4:-79596968 | MS.gene56130:CDS |
| GGTCTGCTTCCAGCTATGGT+TGG | 0.541023 | 7.4:+79590046 | None:intergenic |
| AGTCCTCCAGTTATTGGACC+AGG | 0.547428 | 7.4:+79588310 | None:intergenic |
| GCTGGGAAGATGCCAGATAG+AGG | 0.551836 | 7.4:-79588268 | MS.gene56130:CDS |
| GAAGACAGAGTTGCCAAGCA+TGG | 0.552651 | 7.4:-79595734 | MS.gene56130:CDS |
| GGAACAAGAAGAAGAGTGAG+AGG | 0.555347 | 7.4:+79597254 | None:intergenic |
| CAGTTACTGAGTGGTCTGGT+GGG | 0.562225 | 7.4:-79590081 | MS.gene56130:CDS |
| TTCTCTCATTCTATCAAGGA+CGG | 0.563820 | 7.4:+79595699 | None:intergenic |
| AGGGGTTACTTCAATATCAG+TGG | 0.564171 | 7.4:-79592577 | MS.gene56130:CDS |
| ATATCATGTCATCCAAAGGT+TGG | 0.567247 | 7.4:-79589593 | MS.gene56130:CDS |
| CACCTATATATGGTGCCGCT+GGG | 0.570056 | 7.4:-79588285 | MS.gene56130:CDS |
| TGGTCCAATAACTGGAGGAC+TGG | 0.570823 | 7.4:-79588308 | MS.gene56130:CDS |
| TTTCAGGTGAAAGAAAATCC+TGG | 0.572066 | 7.4:-79588328 | MS.gene56130:intron |
| TGAAGAAACTTACTTTGATG+GGG | 0.572772 | 7.4:+79593321 | None:intergenic |
| ACAGTTACTGAGTGGTCTGG+TGG | 0.573589 | 7.4:-79590082 | MS.gene56130:intron |
| GTGGATAAGTTACAATCAGA+TGG | 0.575268 | 7.4:-79595778 | MS.gene56130:CDS |
| CTGGAATACATCCAAATGCA+AGG | 0.579196 | 7.4:+79593941 | None:intergenic |
| CCTCATTTATGACAGAAAAG+TGG | 0.579655 | 7.4:+79595435 | None:intergenic |
| AGAAATGATGCAGTTTGGCA+AGG | 0.581484 | 7.4:-79595670 | MS.gene56130:CDS |
| GATGGTAAATCTAAAAGGGA+TGG | 0.583932 | 7.4:-79595760 | MS.gene56130:CDS |
| TAGAAACCATGAAATCAGAA+AGG | 0.584372 | 7.4:-79592505 | MS.gene56130:intron |
| CTTTGGCATTTGTTTCCATG+TGG | 0.588327 | 7.4:-79593185 | MS.gene56130:CDS |
| CAGTGGATGTGCATAAATAT+GGG | 0.593412 | 7.4:-79592560 | MS.gene56130:CDS |
| ATACAAAGCCACCAAGGCAA+AGG | 0.594290 | 7.4:+79593161 | None:intergenic |
| TATGCTGAGTGACCAGACTC+AGG | 0.595937 | 7.4:+79593643 | None:intergenic |
| AATACAAAAGCAATTATGGA+AGG | 0.596677 | 7.4:-79589808 | MS.gene56130:CDS |
| TGTGCGCTTTGAGGCAGAAG+TGG | 0.603379 | 7.4:-79593913 | MS.gene56130:CDS |
| AAGACCCGATATGACAATTG+TGG | 0.605703 | 7.4:-79589655 | MS.gene56130:CDS |
| TCTTCCAATGATAAACAACT+CGG | 0.605917 | 7.4:+79589674 | None:intergenic |
| CACCAAGGCAAAGGTCCACA+TGG | 0.607122 | 7.4:+79593170 | None:intergenic |
| TTGAGAGAGAAACGAATTCG+CGG | 0.616888 | 7.4:+79597283 | None:intergenic |
| ACATCTGGAGGACAAATATG+TGG | 0.618907 | 7.4:-79593852 | MS.gene56130:CDS |
| TGGAATACATCCAAATGCAA+GGG | 0.618914 | 7.4:+79593942 | None:intergenic |
| AAATATGGGTTGGCTCCCAA+AGG | 0.620427 | 7.4:-79592546 | MS.gene56130:CDS |
| AATGATATCATGTCATCCAA+AGG | 0.624476 | 7.4:-79589597 | MS.gene56130:CDS |
| GGGCAGCAATGATATCTCTA+GGG | 0.626064 | 7.4:-79590000 | MS.gene56130:CDS |
| TGTGGCAACATGACATCAGG+AGG | 0.628292 | 7.4:-79593834 | MS.gene56130:CDS |
| ATTATCCCATGAGGAAACCC+AGG | 0.633375 | 7.4:+79593347 | None:intergenic |
| CTTCCAATGATAAACAACTC+GGG | 0.639128 | 7.4:+79589675 | None:intergenic |
| AGTAAAGAAAAGACATCTGG+AGG | 0.643748 | 7.4:-79593864 | MS.gene56130:CDS |
| TAAAATCATAAGGTTGAATG+GGG | 0.646928 | 7.4:+79592607 | None:intergenic |
| TTCACTGTTTATCGCAAACG+CGG | 0.649473 | 7.4:-79597225 | MS.gene56130:CDS |
| TTATGTTATATGCAGCATAG+AGG | 0.650106 | 7.4:-79589703 | MS.gene56130:intron |
| CATTTGTCACAGTTACTGAG+TGG | 0.652868 | 7.4:-79590090 | MS.gene56130:intron |
| AGACAGAGTTGCCAAGCATG+GGG | 0.662640 | 7.4:-79595732 | MS.gene56130:CDS |
| GGATGTGCATAAATATGGGT+TGG | 0.663951 | 7.4:-79592556 | MS.gene56130:CDS |
| ATGGGGTCTATTATCCCATG+AGG | 0.669772 | 7.4:+79593338 | None:intergenic |
| AAGGTAATACAAAGCCACCA+AGG | 0.679082 | 7.4:+79593155 | None:intergenic |
| CTATATAACCCTTCACACCA+GGG | 0.682886 | 7.4:+79596960 | None:intergenic |
| ATTGGAGGAGATGAGTCTGG+TGG | 0.704181 | 7.4:-79595458 | MS.gene56130:CDS |
| AATCCTGGTCCAATAACTGG+AGG | 0.704883 | 7.4:-79588313 | MS.gene56130:CDS |
| AGAAGTGGTTGCAATGACAG+CGG | 0.708284 | 7.4:-79593898 | MS.gene56130:CDS |
| GAAGATGCCAGATAGAGGAA+CGG | 0.709209 | 7.4:-79588263 | MS.gene56130:CDS |
| GTGGCAACATGACATCAGGA+GGG | 0.719581 | 7.4:-79593833 | MS.gene56130:CDS |
| AGAGAGAAACGAATTCGCGG+TGG | 0.726132 | 7.4:+79597286 | None:intergenic |
| GCGATAAACAGTGAAAACAG+AGG | 0.727937 | 7.4:+79597233 | None:intergenic |
| TCTATCTGGCATCTTCCCAG+CGG | 0.735851 | 7.4:+79588270 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 79588222 | 79597351 | 79588222 | ID=MS.gene56130 |
| chr7.4 | mRNA | 79588222 | 79597351 | 79588222 | ID=MS.gene56130.t1;Parent=MS.gene56130 |
| chr7.4 | exon | 79597149 | 79597351 | 79597149 | ID=MS.gene56130.t1.exon1;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79597149 | 79597351 | 79597149 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79596943 | 79596988 | 79596943 | ID=MS.gene56130.t1.exon2;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79596943 | 79596988 | 79596943 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79595652 | 79595803 | 79595652 | ID=MS.gene56130.t1.exon3;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79595652 | 79595803 | 79595652 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79595425 | 79595484 | 79595425 | ID=MS.gene56130.t1.exon4;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79595425 | 79595484 | 79595425 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79593756 | 79593980 | 79593756 | ID=MS.gene56130.t1.exon5;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79593756 | 79593980 | 79593756 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79593531 | 79593672 | 79593531 | ID=MS.gene56130.t1.exon6;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79593531 | 79593672 | 79593531 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79593334 | 79593384 | 79593334 | ID=MS.gene56130.t1.exon7;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79593334 | 79593384 | 79593334 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79593139 | 79593230 | 79593139 | ID=MS.gene56130.t1.exon8;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79593139 | 79593230 | 79593139 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79592506 | 79592632 | 79592506 | ID=MS.gene56130.t1.exon9;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79592506 | 79592632 | 79592506 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79590292 | 79590307 | 79590292 | ID=MS.gene56130.t1.exon10;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79590292 | 79590307 | 79590292 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79589993 | 79590100 | 79589993 | ID=MS.gene56130.t1.exon11;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79589993 | 79590100 | 79589993 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79589787 | 79589841 | 79589787 | ID=MS.gene56130.t1.exon12;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79589787 | 79589841 | 79589787 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79589564 | 79589710 | 79589564 | ID=MS.gene56130.t1.exon13;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79589564 | 79589710 | 79589564 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79589376 | 79589454 | 79589376 | ID=MS.gene56130.t1.exon14;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79589376 | 79589454 | 79589376 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| chr7.4 | exon | 79588222 | 79588344 | 79588222 | ID=MS.gene56130.t1.exon15;Parent=MS.gene56130.t1 |
| chr7.4 | CDS | 79588222 | 79588344 | 79588222 | ID=cds.MS.gene56130.t1;Parent=MS.gene56130.t1 |
| Gene Sequence |
| Protein sequence |
