Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060311.t1 | XP_013470032.1 | 98.9 | 563 | 6 | 0 | 1 | 563 | 1 | 563 | 0.00E+00 | 1135.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060311.t1 | Q93ZR1 | 91.3 | 562 | 49 | 0 | 2 | 563 | 4 | 565 | 1.2e-310 | 1066.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060311.t1 | A0A072W1A9 | 98.9 | 563 | 6 | 0 | 1 | 563 | 1 | 563 | 0.0e+00 | 1135.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene060311.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014181 | MS.gene060311 | PPI |
| MS.gene072220 | MS.gene060311 | PPI |
| MS.gene46303 | MS.gene060311 | PPI |
| MS.gene060311 | MS.gene75146 | PPI |
| MS.gene68113 | MS.gene060311 | PPI |
| MS.gene20245 | MS.gene060311 | PPI |
| MS.gene011065 | MS.gene060311 | PPI |
| MS.gene015202 | MS.gene060311 | PPI |
| MS.gene037409 | MS.gene060311 | PPI |
| MS.gene09543 | MS.gene060311 | PPI |
| MS.gene36633 | MS.gene060311 | PPI |
| MS.gene063067 | MS.gene060311 | PPI |
| MS.gene015206 | MS.gene060311 | PPI |
| MS.gene072221 | MS.gene060311 | PPI |
| MS.gene018762 | MS.gene060311 | PPI |
| MS.gene060311 | MS.gene90863 | PPI |
| MS.gene020313 | MS.gene060311 | PPI |
| MS.gene04820 | MS.gene060311 | PPI |
| MS.gene68716 | MS.gene060311 | PPI |
| MS.gene060311 | MS.gene09540 | PPI |
| MS.gene060311 | MS.gene36746 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060311.t1 | MTR_1g107255 | 98.934 | 563 | 6 | 0 | 1 | 563 | 1 | 563 | 0.0 | 1153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060311.t1 | AT5G50320 | 91.281 | 562 | 49 | 0 | 2 | 563 | 4 | 565 | 0.0 | 1083 |
Find 176 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCGTGAACTCCATGTTTA+TGG | 0.107869 | 1.2:+79849301 | MS.gene060311:CDS |
| CCACCTCTTCTGGTTTAATT+TGG | 0.193138 | 1.2:-79848879 | None:intergenic |
| TCAGGTTGAGTTTATATTAA+TGG | 0.195676 | 1.2:+79846666 | MS.gene060311:intron |
| CACTACTTGTCCAGAGCTTA+TGG | 0.210436 | 1.2:+79849264 | MS.gene060311:CDS |
| ACGCCATTACTACAGAAAAT+TGG | 0.214514 | 1.2:+79849722 | MS.gene060311:CDS |
| CGAACAAGTTCCACCTCTTC+TGG | 0.222979 | 1.2:-79848889 | None:intergenic |
| ACTAAGATAGCTGTAATTTC+TGG | 0.226240 | 1.2:+79849690 | MS.gene060311:CDS |
| GACGGGTTTGGCTCGGAGTT+TGG | 0.246198 | 1.2:-79846181 | None:intergenic |
| ATTACCGTGATTACTTTATA+AGG | 0.254776 | 1.2:+79846716 | MS.gene060311:CDS |
| ACTTGTTCGTCGTGATTATA+TGG | 0.272919 | 1.2:+79848903 | MS.gene060311:CDS |
| GGGTTATGGTACGCTTCTTA+TGG | 0.292786 | 1.2:+79849629 | MS.gene060311:intron |
| CAGGTTGAGTTTATATTAAT+GGG | 0.294302 | 1.2:+79846667 | MS.gene060311:intron |
| CCGATGCCTTTGGTGACCTC+TGG | 0.298519 | 1.2:+79848627 | MS.gene060311:CDS |
| GGCAATCATCTCAACAAGTT+TGG | 0.300851 | 1.2:-79846124 | None:intergenic |
| CTACCTCTTGTCTGCACATA+AGG | 0.308325 | 1.2:-79846504 | None:intergenic |
| ACGGGTTTGGCTCGGAGTTT+GGG | 0.323050 | 1.2:-79846180 | None:intergenic |
| CTTGAGCAGGATATCCTTGT+TGG | 0.326582 | 1.2:+79849211 | MS.gene060311:intron |
| AATTATTGTCAACAGGGTTA+TGG | 0.339302 | 1.2:+79849615 | MS.gene060311:intron |
| TTACTAATTATTATTACATT+AGG | 0.340439 | 1.2:-79849779 | None:intergenic |
| ATTGATCAGCTTAAGCGTTT+AGG | 0.349355 | 1.2:+79846528 | MS.gene060311:CDS |
| AAACCCGTCCGAACCGCATC+TGG | 0.355392 | 1.2:+79846195 | MS.gene060311:CDS |
| GGGTCGAGAAAGGGAATCTA+AGG | 0.356257 | 1.2:+79848649 | MS.gene060311:CDS |
| CTTTATGAGCTCTGGAAAAC+TGG | 0.356965 | 1.2:+79848377 | MS.gene060311:CDS |
| ACTCTTGTAATACGTGGAAC+TGG | 0.357820 | 1.2:+79848353 | MS.gene060311:CDS |
| CGCTCGAATTGCACGCATAC+TGG | 0.367382 | 1.2:-79846358 | None:intergenic |
| ATTAGGCATTTCATCATGTA+AGG | 0.374054 | 1.2:-79849762 | None:intergenic |
| AGGAGGCCAGATTATTGTCT+TGG | 0.377113 | 1.2:+79847710 | MS.gene060311:intron |
| AATCTTCATGATGCTTTGTC+TGG | 0.377549 | 1.2:+79846739 | MS.gene060311:CDS |
| CGATGCCTTTGGTGACCTCT+GGG | 0.379236 | 1.2:+79848628 | MS.gene060311:CDS |
| TACCTGGATTCCAGCTTCTC+TGG | 0.383322 | 1.2:-79848727 | None:intergenic |
| TCCCTTTCAACACCAACATT+TGG | 0.384171 | 1.2:-79848263 | None:intergenic |
| TGGAACTTTCATGTCCCTTC+CGG | 0.386776 | 1.2:+79846690 | MS.gene060311:CDS |
| GGAACTGCTGTACCGGTTCA+TGG | 0.389741 | 1.2:+79849322 | MS.gene060311:CDS |
| AGAACCTCTCGTTCGGAGTC+TGG | 0.399137 | 1.2:-79846153 | None:intergenic |
| GCGGGATATTCCGATGCCTT+TGG | 0.400811 | 1.2:+79848617 | MS.gene060311:CDS |
| CTAAGATAGCTGTAATTTCT+GGG | 0.402023 | 1.2:+79849691 | MS.gene060311:CDS |
| CGCCATTACTACAGAAAATT+GGG | 0.402981 | 1.2:+79849723 | MS.gene060311:CDS |
| TCTGCTGCTTGCCGTAAGTA+TGG | 0.404379 | 1.2:+79846087 | MS.gene060311:CDS |
| GGCTAAAGATGCCGGTTTCA+AGG | 0.407082 | 1.2:+79847865 | MS.gene060311:CDS |
| CCTGGAAAAGGAGGCTTTGA+AGG | 0.415150 | 1.2:+79845955 | MS.gene060311:CDS |
| GCAATCATCTCAACAAGTTT+GGG | 0.417212 | 1.2:-79846123 | None:intergenic |
| GTTTAAAATGTCGTGATGTT+CGG | 0.419207 | 1.2:+79848703 | MS.gene060311:CDS |
| AGATGCGGTTCGGACGGGTT+TGG | 0.419639 | 1.2:-79846193 | None:intergenic |
| GGTTGTACGCGATTGGAGAT+TGG | 0.424463 | 1.2:+79847761 | MS.gene060311:CDS |
| TTCTTACGGTTGTACGCGAT+TGG | 0.426167 | 1.2:+79847754 | MS.gene060311:CDS |
| GAGCGTTGAGATCAACTTTG+TGG | 0.429078 | 1.2:-79846059 | None:intergenic |
| CAACATCCTCGTAAGTGCTT+TGG | 0.432775 | 1.2:-79847787 | None:intergenic |
| GGAGGCCAGATTATTGTCTT+GGG | 0.438031 | 1.2:+79847711 | MS.gene060311:intron |
| ACACCAACATTTGGAAGATC+AGG | 0.441020 | 1.2:-79848254 | None:intergenic |
| ATTATATGGCAAATGAAGGT+TGG | 0.442902 | 1.2:+79848917 | MS.gene060311:CDS |
| TGCTGTACCGGTTCATGGGC+GGG | 0.453368 | 1.2:+79849327 | MS.gene060311:CDS |
| GGCAGCTGCAATGGTGGCGG+AGG | 0.455678 | 1.2:+79845915 | MS.gene060311:CDS |
| TCAGAATCCCGCCCATGAAC+CGG | 0.459387 | 1.2:-79849334 | None:intergenic |
| GACACAAATGTTACCGGTGG+TGG | 0.462023 | 1.2:-79846268 | None:intergenic |
| CGGTTCGGACGGGTTTGGCT+CGG | 0.462397 | 1.2:-79846188 | None:intergenic |
| TTCCAAATGTTGGTGTTGAA+AGG | 0.463184 | 1.2:+79848261 | MS.gene060311:CDS |
| GCAGTAGACACAAATGTTAC+CGG | 0.465327 | 1.2:-79846274 | None:intergenic |
| ACTACTTGTCCAGAGCTTAT+GGG | 0.466121 | 1.2:+79849265 | MS.gene060311:CDS |
| TCCAAATGTTGGTGTTGAAA+GGG | 0.466271 | 1.2:+79848262 | MS.gene060311:CDS |
| GTGACCTCTGGGGTCGAGAA+AGG | 0.471545 | 1.2:+79848639 | MS.gene060311:CDS |
| CAGCTATTCCAGATGCGGTT+CGG | 0.471819 | 1.2:-79846203 | None:intergenic |
| GATGTTCGGACCAGAGAAGC+TGG | 0.475031 | 1.2:+79848717 | MS.gene060311:CDS |
| TTATATGGCAAATGAAGGTT+GGG | 0.475457 | 1.2:+79848918 | MS.gene060311:CDS |
| AGTCCCTTGTTTAGAGCAGA+TGG | 0.482729 | 1.2:+79848314 | MS.gene060311:CDS |
| GAACTGGGCTTTATGAGCTC+TGG | 0.487484 | 1.2:+79848369 | MS.gene060311:CDS |
| CTCTTGTAATACGTGGAACT+GGG | 0.488163 | 1.2:+79848354 | MS.gene060311:CDS |
| GGGAAGAAGAACCTCTCGTT+CGG | 0.489882 | 1.2:-79846160 | None:intergenic |
| AAGGCACCACGTCCTGGAAA+AGG | 0.493207 | 1.2:+79845943 | MS.gene060311:CDS |
| AACATTTGTGTCTACTGCCC+TGG | 0.499757 | 1.2:+79846279 | MS.gene060311:CDS |
| TACCTCTTGTCTGCACATAA+GGG | 0.499999 | 1.2:-79846503 | None:intergenic |
| ACAGTAACAAACCTTGAAAC+CGG | 0.500422 | 1.2:-79847876 | None:intergenic |
| TGTTTATGGAACTGCTGTAC+CGG | 0.502199 | 1.2:+79849315 | MS.gene060311:CDS |
| CTGTATTCAAAATCAGAGTC+AGG | 0.505172 | 1.2:-79846306 | None:intergenic |
| TGAGGCCCAAGACAATAATC+TGG | 0.507785 | 1.2:-79847716 | None:intergenic |
| ATAGCTGTAATTTCTGGGGT+TGG | 0.510369 | 1.2:+79849696 | MS.gene060311:CDS |
| CATAGTGCAACCAAGTGTAT+TGG | 0.511814 | 1.2:+79846805 | MS.gene060311:CDS |
| GACCAGAGAAGCTGGAATCC+AGG | 0.513139 | 1.2:+79848725 | MS.gene060311:CDS |
| AAATCAGAGTCAGGACCACC+AGG | 0.513557 | 1.2:-79846297 | None:intergenic |
| TGAAACCGGCATCTTTAGCC+AGG | 0.513631 | 1.2:-79847862 | None:intergenic |
| ATTCCAGATGCGGTTCGGAC+GGG | 0.516987 | 1.2:-79846198 | None:intergenic |
| CTGCGACAAATGCTTTCTTA+CGG | 0.521566 | 1.2:+79847740 | MS.gene060311:CDS |
| CACGTGCTTCTTCTTCACTA+AGG | 0.522717 | 1.2:-79845984 | None:intergenic |
| TGACCTCTGGGGTCGAGAAA+GGG | 0.522733 | 1.2:+79848640 | MS.gene060311:CDS |
| TATTCCAGATGCGGTTCGGA+CGG | 0.523148 | 1.2:-79846199 | None:intergenic |
| ATCGAGAATGGCAGCTGCAA+TGG | 0.524231 | 1.2:+79845906 | None:intergenic |
| CGTGATTATATGGCAAATGA+AGG | 0.524748 | 1.2:+79848913 | MS.gene060311:CDS |
| GGAGTTAGCATTAGCTCGAA+TGG | 0.524838 | 1.2:+79848671 | MS.gene060311:CDS |
| AATTGTCATGCCAATACACT+TGG | 0.525376 | 1.2:-79846815 | None:intergenic |
| CGCCTCTTCTACATTGGCAG+AGG | 0.532370 | 1.2:-79846767 | None:intergenic |
| TGCCCTCACATTGCCACCAC+CGG | 0.535961 | 1.2:+79846255 | MS.gene060311:CDS |
| AATTGGGATATGAGCTTGAA+GGG | 0.539350 | 1.2:+79849739 | MS.gene060311:CDS |
| CGTCACCGCCTCTTCTACAT+TGG | 0.539713 | 1.2:-79846773 | None:intergenic |
| ACTCTATAAACACGTGTCCA+TGG | 0.540097 | 1.2:-79848591 | None:intergenic |
| TACAGTACTCAGTCTTACAC+TGG | 0.540672 | 1.2:+79846324 | MS.gene060311:CDS |
| ATTAGCTCGAATGGAAGACT+TGG | 0.543470 | 1.2:+79848680 | MS.gene060311:CDS |
| GTCATATGAAGATACACGGC+AGG | 0.543921 | 1.2:+79848951 | MS.gene060311:CDS |
| CAAGTTTGGGTGCACGTGAA+AGG | 0.544286 | 1.2:-79846110 | None:intergenic |
| AATGGCAGCTGCAATGGTGG+CGG | 0.544495 | 1.2:+79845912 | None:intergenic |
| AACTTTCATGTCCCTTCCGG+CGG | 0.546193 | 1.2:+79846693 | MS.gene060311:CDS |
| GAACTGCTGTACCGGTTCAT+GGG | 0.546285 | 1.2:+79849323 | MS.gene060311:CDS |
| ATGAGCTCTGGAAAACTGGC+AGG | 0.546949 | 1.2:+79848381 | MS.gene060311:CDS |
| GAACACTTACCCATAAGCTC+TGG | 0.547667 | 1.2:-79849274 | None:intergenic |
| ATGATGTCCACAAGTTGCTC+AGG | 0.548538 | 1.2:-79848543 | None:intergenic |
| CCAGAGGTCACCAAAGGCAT+CGG | 0.550505 | 1.2:-79848627 | None:intergenic |
| AAAGGAGGCTTTGAAGGCCA+CGG | 0.552793 | 1.2:+79845961 | MS.gene060311:CDS |
| AAGCCCATCTGCTCTAAACA+AGG | 0.553799 | 1.2:-79848318 | None:intergenic |
| CCAAATTAAACCAGAAGAGG+TGG | 0.554019 | 1.2:+79848879 | MS.gene060311:CDS |
| CTGCTGTACCGGTTCATGGG+CGG | 0.556681 | 1.2:+79849326 | MS.gene060311:CDS |
| CGAATTGCACGCATACTGGT+AGG | 0.558678 | 1.2:-79846354 | None:intergenic |
| CACGTGAAAGGCCATACTTA+CGG | 0.558888 | 1.2:-79846098 | None:intergenic |
| GCTCTGGACAAGTAGTGTTA+CGG | 0.560794 | 1.2:-79849258 | None:intergenic |
| TGGTACGCTTCTTATGGAGG+AGG | 0.562129 | 1.2:+79849635 | MS.gene060311:CDS |
| ATGGTCGACTTATCTCATAA+AGG | 0.565397 | 1.2:+79846036 | MS.gene060311:CDS |
| CTTCTTCTTCACTAAGGCCG+TGG | 0.565667 | 1.2:-79845978 | None:intergenic |
| ACGTGTTTATAGAGTTCAGC+GGG | 0.566788 | 1.2:+79848599 | MS.gene060311:CDS |
| AAATTGGGATATGAGCTTGA+AGG | 0.569511 | 1.2:+79849738 | MS.gene060311:CDS |
| TTATGGTACGCTTCTTATGG+AGG | 0.577351 | 1.2:+79849632 | MS.gene060311:CDS |
| AACCCTTATGTGCAGACAAG+AGG | 0.578250 | 1.2:+79846501 | MS.gene060311:CDS |
| ATGTCCACAAGTTGCTCAGG+TGG | 0.579117 | 1.2:-79848540 | None:intergenic |
| TCCTTGCAATGGTACCTCCA+TGG | 0.582174 | 1.2:+79848574 | MS.gene060311:CDS |
| TTAGCTCGAATGGAAGACTT+GGG | 0.582791 | 1.2:+79848681 | MS.gene060311:CDS |
| CGTAAGAAAGCATTTGTCGC+AGG | 0.582996 | 1.2:-79847739 | None:intergenic |
| TTATCCACCTGAGCAACTTG+TGG | 0.584183 | 1.2:+79848536 | MS.gene060311:CDS |
| CACCTCTGCCAATGTAGAAG+AGG | 0.586680 | 1.2:+79846765 | MS.gene060311:CDS |
| GTTGAGTTTATATTAATGGG+TGG | 0.587623 | 1.2:+79846670 | MS.gene060311:CDS |
| GTCCCTTGTTTAGAGCAGAT+GGG | 0.588499 | 1.2:+79848315 | MS.gene060311:CDS |
| GTTGCTCGTGACACTAATAG+AGG | 0.589637 | 1.2:+79847806 | MS.gene060311:CDS |
| TGCAGAGATTGTAAACTCCA+TGG | 0.589639 | 1.2:+79846017 | MS.gene060311:CDS |
| TTCTGACAAGCTACAACACC+AGG | 0.589825 | 1.2:+79849351 | MS.gene060311:CDS |
| TCACCAAATTAAACCAGAAG+AGG | 0.591716 | 1.2:+79848876 | MS.gene060311:CDS |
| GGAGTTTACAATCTCTGCAA+TGG | 0.592885 | 1.2:-79846013 | None:intergenic |
| ATGCCTGATCTTCCAAATGT+TGG | 0.593013 | 1.2:+79848251 | MS.gene060311:CDS |
| TTTACCAGACTCCGAACGAG+AGG | 0.593505 | 1.2:+79846149 | MS.gene060311:CDS |
| TACCCCACTCTTGTAATACG+TGG | 0.597220 | 1.2:+79848347 | MS.gene060311:CDS |
| GAGAATGGCAGCTGCAATGG+TGG | 0.601590 | 1.2:+79845909 | None:intergenic |
| AAGTAATCACGGTAATCCGC+CGG | 0.605266 | 1.2:-79846709 | None:intergenic |
| GAAAGCATTTGTCGCAGGTG+AGG | 0.608219 | 1.2:-79847734 | None:intergenic |
| GTTCCACGTATTACAAGAGT+GGG | 0.609518 | 1.2:-79848350 | None:intergenic |
| CTCTGCCAATGTAGAAGAGG+CGG | 0.613175 | 1.2:+79846768 | MS.gene060311:CDS |
| TCCATGGAGGTACCATTGCA+AGG | 0.613347 | 1.2:-79848575 | None:intergenic |
| AGTTCCACGTATTACAAGAG+TGG | 0.617723 | 1.2:-79848351 | None:intergenic |
| GATTCCTTATAAAGTAATCA+CGG | 0.618997 | 1.2:-79846720 | None:intergenic |
| ATTTGTGTCTACTGCCCTGG+TGG | 0.619210 | 1.2:+79846282 | MS.gene060311:CDS |
| ATCACGGTAATCCGCCGGAA+GGG | 0.620461 | 1.2:-79846704 | None:intergenic |
| TTTAGGTCACAGTGTAGACA+AGG | 0.621502 | 1.2:+79846545 | MS.gene060311:CDS |
| TTGTTACGACTGCGGAAATG+TGG | 0.624141 | 1.2:+79849235 | MS.gene060311:CDS |
| TTGTTGGTTTGTTACGACTG+CGG | 0.625120 | 1.2:+79849227 | MS.gene060311:CDS |
| TTACCGGTGGTGGCAATGTG+AGG | 0.625457 | 1.2:-79846258 | None:intergenic |
| GCACCACGTCCTGGAAAAGG+AGG | 0.625885 | 1.2:+79845946 | MS.gene060311:CDS |
| AATCACGGTAATCCGCCGGA+AGG | 0.629594 | 1.2:-79846705 | None:intergenic |
| GTACAGCAGTTCCATAAACA+TGG | 0.632941 | 1.2:-79849312 | None:intergenic |
| CTTATGTGCAGACAAGAGGT+AGG | 0.635365 | 1.2:+79846505 | MS.gene060311:CDS |
| TAAGATAGCTGTAATTTCTG+GGG | 0.637498 | 1.2:+79849692 | MS.gene060311:CDS |
| AACAACAGCTATTCCAGATG+CGG | 0.644167 | 1.2:-79846208 | None:intergenic |
| GATGCCTTTGGTGACCTCTG+GGG | 0.650465 | 1.2:+79848629 | MS.gene060311:CDS |
| AGCCCATCTGCTCTAAACAA+GGG | 0.651856 | 1.2:-79848317 | None:intergenic |
| TCGTTCGGAGTCTGGTAAAG+CGG | 0.654401 | 1.2:-79846145 | None:intergenic |
| CATAGCAAGGATCCTTGCAA+TGG | 0.656475 | 1.2:+79848563 | MS.gene060311:CDS |
| TCGACCCCAGAGGTCACCAA+AGG | 0.657380 | 1.2:-79848633 | None:intergenic |
| GTATGCGTGCAATTCGAGCG+AGG | 0.659261 | 1.2:+79846361 | MS.gene060311:CDS |
| AACTTGTGGACATCATAGCA+AGG | 0.660784 | 1.2:+79848550 | MS.gene060311:CDS |
| TGTTGGTGTTGAAAGGGACA+TGG | 0.661690 | 1.2:+79848268 | MS.gene060311:CDS |
| TTTATGAGATAAGTCGACCA+TGG | 0.671183 | 1.2:-79846034 | None:intergenic |
| TTCTTATGGAGGAGGCTGAG+CGG | 0.675562 | 1.2:+79849643 | MS.gene060311:CDS |
| TGGAGTCCAAAGCACTTACG+AGG | 0.676860 | 1.2:+79847781 | MS.gene060311:CDS |
| GCAATGTGAGGGCAACGATG+AGG | 0.677142 | 1.2:-79846246 | None:intergenic |
| CACGTGTTTATAGAGTTCAG+CGG | 0.679893 | 1.2:+79848598 | MS.gene060311:CDS |
| GGTCGAGAAAGGGAATCTAA+GGG | 0.680470 | 1.2:+79848650 | MS.gene060311:CDS |
| TACCGGTGGTGGCAATGTGA+GGG | 0.686745 | 1.2:-79846257 | None:intergenic |
| ATTCCCTTTCTCGACCCCAG+AGG | 0.691081 | 1.2:-79848643 | None:intergenic |
| ACAGTACTCAGTCTTACACT+GGG | 0.695397 | 1.2:+79846325 | MS.gene060311:CDS |
| AATCAGAGTCAGGACCACCA+GGG | 0.704933 | 1.2:-79846296 | None:intergenic |
| GTAGACACAAATGTTACCGG+TGG | 0.711036 | 1.2:-79846271 | None:intergenic |
| CTATAAACACGTGTCCATGG+AGG | 0.742724 | 1.2:-79848588 | None:intergenic |
| GCAGTCGTAACAAACCAACA+AGG | 0.747954 | 1.2:-79849225 | None:intergenic |
| TTCCACGTATTACAAGAGTG+GGG | 0.762155 | 1.2:-79848349 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTCTTTTTTTTTTTTAAA+TGG | - | chr1.2:79847062-79847081 | None:intergenic | 10.0% |
| !!! | ATATATTTTTTTCAAAAACA+AGG | - | chr1.2:79847107-79847126 | None:intergenic | 10.0% |
| !!! | ATTTATGTTTTTTTTTTCTT+TGG | + | chr1.2:79848201-79848220 | MS.gene060311:intron | 10.0% |
| !!! | TTTTTTAAATGGATTTTTAT+GGG | - | chr1.2:79847051-79847070 | None:intergenic | 10.0% |
| !!! | TTTTTTTAAATGGATTTTTA+TGG | - | chr1.2:79847052-79847071 | None:intergenic | 10.0% |
| !! | TATCATGTAGTTATATTAAT+GGG | + | chr1.2:79846627-79846646 | MS.gene060311:intron | 15.0% |
| !!! | TGAAAAAAGTGATTTTTTTA+AGG | + | chr1.2:79847226-79847245 | MS.gene060311:intron | 15.0% |
| !!! | TTTGTTTACTAGTATTATTT+TGG | + | chr1.2:79848813-79848832 | MS.gene060311:intron | 15.0% |
| !! | AAAAAAAACTTCTTTCAGAA+GGG | - | chr1.2:79847451-79847470 | None:intergenic | 20.0% |
| !! | ATATAGGAAAATAATTTGAC+AGG | - | chr1.2:79847931-79847950 | None:intergenic | 20.0% |
| !! | GTATCATGTAGTTATATTAA+TGG | + | chr1.2:79846626-79846645 | MS.gene060311:intron | 20.0% |
| !! | TCAACTTGCAAATAATTAAA+TGG | - | chr1.2:79846858-79846877 | None:intergenic | 20.0% |
| !!! | TATTTTTTTCAAAAACAAGG+AGG | - | chr1.2:79847104-79847123 | None:intergenic | 20.0% |
| ! | AAAAAAACTTCTTTCAGAAG+GGG | - | chr1.2:79847450-79847469 | None:intergenic | 25.0% |
| ! | AACTAAACCAGTTTATATCA+TGG | - | chr1.2:79847545-79847564 | None:intergenic | 25.0% |
| ! | AATATCCAAGAAGATACATA+TGG | + | chr1.2:79849515-79849534 | MS.gene060311:intron | 25.0% |
| ! | AATATCCATATGTATCTTCT+TGG | - | chr1.2:79849523-79849542 | None:intergenic | 25.0% |
| ! | AGAAAATGATGATAGACAAA+AGG | - | chr1.2:79849019-79849038 | None:intergenic | 25.0% |
| ! | ATTACCGTGATTACTTTATA+AGG | + | chr1.2:79846716-79846735 | MS.gene060311:CDS | 25.0% |
| ! | CAACAACAAATTTACACTAA+AGG | - | chr1.2:79849151-79849170 | None:intergenic | 25.0% |
| ! | CATTATTCATCAGGATTAAA+AGG | + | chr1.2:79848466-79848485 | MS.gene060311:intron | 25.0% |
| ! | GAAAAAAAACTTCTTTCAGA+AGG | - | chr1.2:79847452-79847471 | None:intergenic | 25.0% |
| ! | GATTCCTTATAAAGTAATCA+CGG | - | chr1.2:79846723-79846742 | None:intergenic | 25.0% |
| ! | GTTTAGTTACATGAATCAAA+TGG | - | chr1.2:79847426-79847445 | None:intergenic | 25.0% |
| ! | TCATTATATTTGTCTAGACA+AGG | + | chr1.2:79848039-79848058 | MS.gene060311:intron | 25.0% |
| ! | TGTGTTACATTAACTATTAC+CGG | - | chr1.2:79847648-79847667 | None:intergenic | 25.0% |
| ! | TTTCTATCTCATTATTCATC+AGG | + | chr1.2:79848457-79848476 | MS.gene060311:intron | 25.0% |
| !! | AAAAAAATCTGAAACAAACG+GGG | + | chr1.2:79847249-79847268 | MS.gene060311:intron | 25.0% |
| !! | ATGCGTTCTATTTTACTTAT+AGG | - | chr1.2:79846444-79846463 | None:intergenic | 25.0% |
| !! | CAGGTTGAGTTTATATTAAT+GGG | + | chr1.2:79846667-79846686 | MS.gene060311:intron | 25.0% |
| !! | CCTAATAGCTTTTCATTTTA+GGG | + | chr1.2:79847143-79847162 | MS.gene060311:intron | 25.0% |
| !! | GAAAAAAATCTGAAACAAAC+GGG | + | chr1.2:79847248-79847267 | MS.gene060311:intron | 25.0% |
| !! | GGAAAAAAATCTGAAACAAA+CGG | + | chr1.2:79847247-79847266 | MS.gene060311:intron | 25.0% |
| !! | GGTTTAGTTATGATTTTCTA+GGG | + | chr1.2:79847556-79847575 | MS.gene060311:intron | 25.0% |
| !! | TCCTAATAGCTTTTCATTTT+AGG | + | chr1.2:79847142-79847161 | MS.gene060311:intron | 25.0% |
| !! | TGGTTTAGTTATGATTTTCT+AGG | + | chr1.2:79847555-79847574 | MS.gene060311:intron | 25.0% |
| !! | TTTTAAACACATTCAGCATA+AGG | - | chr1.2:79847957-79847976 | None:intergenic | 25.0% |
| !! | TTTTGTCATATGAAGATACA+CGG | + | chr1.2:79848947-79848966 | MS.gene060311:CDS | 25.0% |
| !!! | CAATAATTTTGGTCAAAAGT+AGG | - | chr1.2:79849603-79849622 | None:intergenic | 25.0% |
| !!! | CCTTCTTTATTTTGAATGAA+GGG | + | chr1.2:79849103-79849122 | MS.gene060311:intron | 25.0% |
| !!! | CTTCTTTATTTTGAATGAAG+GGG | + | chr1.2:79849104-79849123 | MS.gene060311:intron | 25.0% |
| !!! | CTTTTGTGTAAAGTTTTGAA+TGG | + | chr1.2:79846888-79846907 | MS.gene060311:intron | 25.0% |
| !!! | TCAGGTTGAGTTTATATTAA+TGG | + | chr1.2:79846666-79846685 | MS.gene060311:intron | 25.0% |
| !!! | TTGTTTGTTATCATCATTGT+AGG | + | chr1.2:79848505-79848524 | MS.gene060311:intron | 25.0% |
| !!! | TTTTCTACTTTGAGTTGTAA+CGG | + | chr1.2:79849033-79849052 | MS.gene060311:intron | 25.0% |
| AAGAAATACAGAATGTCGAT+TGG | - | chr1.2:79848843-79848862 | None:intergenic | 30.0% | |
| AAGAACACATCACATTAGAT+AGG | - | chr1.2:79848409-79848428 | None:intergenic | 30.0% | |
| AATTATTGTCAACAGGGTTA+TGG | + | chr1.2:79849615-79849634 | MS.gene060311:intron | 30.0% | |
| ACAATTTCACACGTTCTTAT+TGG | + | chr1.2:79849426-79849445 | MS.gene060311:intron | 30.0% | |
| ACCAAGAAAAACTACAAATC+AGG | + | chr1.2:79847333-79847352 | MS.gene060311:intron | 30.0% | |
| ACTAAGATAGCTGTAATTTC+TGG | + | chr1.2:79849690-79849709 | MS.gene060311:CDS | 30.0% | |
| ATGATGATAGACAAAAGGAT+AGG | - | chr1.2:79849014-79849033 | None:intergenic | 30.0% | |
| ATTAGGCATTTCATCATGTA+AGG | - | chr1.2:79849765-79849784 | None:intergenic | 30.0% | |
| ATTATATGGCAAATGAAGGT+TGG | + | chr1.2:79848917-79848936 | MS.gene060311:CDS | 30.0% | |
| CCCTAAAATGAAAAGCTATT+AGG | - | chr1.2:79847146-79847165 | None:intergenic | 30.0% | |
| CCCTTCATTCAAAATAAAGA+AGG | - | chr1.2:79849106-79849125 | None:intergenic | 30.0% | |
| CTAAGATAGCTGTAATTTCT+GGG | + | chr1.2:79849691-79849710 | MS.gene060311:CDS | 30.0% | |
| CTTGCAAATAATTAAATGGC+AGG | - | chr1.2:79846854-79846873 | None:intergenic | 30.0% | |
| GACATTCTGTATTTCTTTGT+AGG | + | chr1.2:79848846-79848865 | MS.gene060311:intron | 30.0% | |
| GACCAAAATTATTGTCAACA+GGG | + | chr1.2:79849609-79849628 | MS.gene060311:intron | 30.0% | |
| GTTGAGTTTATATTAATGGG+TGG | + | chr1.2:79846670-79846689 | MS.gene060311:CDS | 30.0% | |
| TAAGATAGCTGTAATTTCTG+GGG | + | chr1.2:79849692-79849711 | MS.gene060311:CDS | 30.0% | |
| TGACCAAAATTATTGTCAAC+AGG | + | chr1.2:79849608-79849627 | MS.gene060311:intron | 30.0% | |
| TTATATGGCAAATGAAGGTT+GGG | + | chr1.2:79848918-79848937 | MS.gene060311:CDS | 30.0% | |
| TTGCACTTCTTAAATTTCTC+AGG | + | chr1.2:79847690-79847709 | MS.gene060311:intron | 30.0% | |
| TTTACACTAAAGGTAAGAAC+AGG | - | chr1.2:79849141-79849160 | None:intergenic | 30.0% | |
| ! | AACCCTGTTGACAATAATTT+TGG | - | chr1.2:79849614-79849633 | None:intergenic | 30.0% |
| ! | ATCCCAATTTTCTGTAGTAA+TGG | - | chr1.2:79849728-79849747 | None:intergenic | 30.0% |
| ! | GTTTAAAATGTCGTGATGTT+CGG | + | chr1.2:79848703-79848722 | MS.gene060311:CDS | 30.0% |
| ! | TGCCTAGTTTGTATTTGAAA+GGG | - | chr1.2:79848139-79848158 | None:intergenic | 30.0% |
| ! | TGTAGTTATATTAATGGGTG+TGG | + | chr1.2:79846632-79846651 | MS.gene060311:intron | 30.0% |
| ! | TTGTTGTTGTTGATGAAACA+TGG | + | chr1.2:79849162-79849181 | MS.gene060311:intron | 30.0% |
| !! | AAATGGATTTTTATGGGTAG+TGG | - | chr1.2:79847045-79847064 | None:intergenic | 30.0% |
| !! | AATGGATTTTTATGGGTAGT+GGG | - | chr1.2:79847044-79847063 | None:intergenic | 30.0% |
| !! | ATTGGTTCTAGATAATTACC+TGG | - | chr1.2:79848746-79848765 | None:intergenic | 30.0% |
| !! | CAAGCTTTAGATAGATTCAT+TGG | + | chr1.2:79848063-79848082 | MS.gene060311:intron | 30.0% |
| !! | TATAGGGAGAATGGATTATA+TGG | + | chr1.2:79847281-79847300 | MS.gene060311:intron | 30.0% |
| !! | TTTCTACTTTGAGTTGTAAC+GGG | + | chr1.2:79849034-79849053 | MS.gene060311:intron | 30.0% |
| !!! | GCCTTCTTTATTTTGAATGA+AGG | + | chr1.2:79849102-79849121 | MS.gene060311:intron | 30.0% |
| !!! | TTGTGTAAAGTTTTGAATGG+AGG | + | chr1.2:79846891-79846910 | MS.gene060311:intron | 30.0% |
| !!! | TTTTCTTTGGCTTTTGCTTT+AGG | + | chr1.2:79848214-79848233 | MS.gene060311:intron | 30.0% |
| AAATTGGGATATGAGCTTGA+AGG | + | chr1.2:79849738-79849757 | MS.gene060311:CDS | 35.0% | |
| AAGTGCATGAAATATACGTG+CGG | + | chr1.2:79846601-79846620 | MS.gene060311:intron | 35.0% | |
| AATCTTCATGATGCTTTGTC+TGG | + | chr1.2:79846739-79846758 | MS.gene060311:CDS | 35.0% | |
| AATTGGGATATGAGCTTGAA+GGG | + | chr1.2:79849739-79849758 | MS.gene060311:CDS | 35.0% | |
| AATTGTCATGCCAATACACT+TGG | - | chr1.2:79846818-79846837 | None:intergenic | 35.0% | |
| ACAGTAACAAACCTTGAAAC+CGG | - | chr1.2:79847879-79847898 | None:intergenic | 35.0% | |
| ACCCCTTTCAAATACAAACT+AGG | + | chr1.2:79848134-79848153 | MS.gene060311:intron | 35.0% | |
| ACCTTTGAGTAAACGTTAAC+CGG | + | chr1.2:79847626-79847645 | MS.gene060311:intron | 35.0% | |
| ACGCCATTACTACAGAAAAT+TGG | + | chr1.2:79849722-79849741 | MS.gene060311:CDS | 35.0% | |
| ACTTGTTCGTCGTGATTATA+TGG | + | chr1.2:79848903-79848922 | MS.gene060311:CDS | 35.0% | |
| AGAAAATTTCCAGACGAGAT+TGG | - | chr1.2:79848764-79848783 | None:intergenic | 35.0% | |
| AGGGACTTTCAAAAAACTCT+CGG | - | chr1.2:79848301-79848320 | None:intergenic | 35.0% | |
| ATATAATGAGACAGCACACA+AGG | - | chr1.2:79848028-79848047 | None:intergenic | 35.0% | |
| ATTGATCAGCTTAAGCGTTT+AGG | + | chr1.2:79846528-79846547 | MS.gene060311:CDS | 35.0% | |
| CACTTCTTAAATTTCTCAGG+AGG | + | chr1.2:79847693-79847712 | MS.gene060311:intron | 35.0% | |
| CCATTCTCCCTATAAGATTT+AGG | - | chr1.2:79847275-79847294 | None:intergenic | 35.0% | |
| CCTAAATCTTATAGGGAGAA+TGG | + | chr1.2:79847272-79847291 | MS.gene060311:intron | 35.0% | |
| CGCCATTACTACAGAAAATT+GGG | + | chr1.2:79849723-79849742 | MS.gene060311:CDS | 35.0% | |
| CGTGATTATATGGCAAATGA+AGG | + | chr1.2:79848913-79848932 | MS.gene060311:CDS | 35.0% | |
| CTGTATTCAAAATCAGAGTC+AGG | - | chr1.2:79846309-79846328 | None:intergenic | 35.0% | |
| CTTATTGGATACTATCTGAG+TGG | + | chr1.2:79849441-79849460 | MS.gene060311:intron | 35.0% | |
| GAAGTGCAAAACTTGATAAG+CGG | - | chr1.2:79847679-79847698 | None:intergenic | 35.0% | |
| GCAATCATCTCAACAAGTTT+GGG | - | chr1.2:79846126-79846145 | None:intergenic | 35.0% | |
| TAAGCAAGACTCTAGTTGTT+TGG | + | chr1.2:79848097-79848116 | MS.gene060311:intron | 35.0% | |
| TACAAATCAGGCTATCAAGA+TGG | + | chr1.2:79847345-79847364 | MS.gene060311:intron | 35.0% | |
| TCAAATACAAACTAGGCAGT+AGG | + | chr1.2:79848141-79848160 | MS.gene060311:intron | 35.0% | |
| TCACCAAATTAAACCAGAAG+AGG | + | chr1.2:79848876-79848895 | MS.gene060311:CDS | 35.0% | |
| TTCATTACAACTTTGAGTGC+AGG | - | chr1.2:79847997-79848016 | None:intergenic | 35.0% | |
| TTTATGAGATAAGTCGACCA+TGG | - | chr1.2:79846037-79846056 | None:intergenic | 35.0% | |
| ! | ACTGTGTTTGCTTTGGATTT+AGG | + | chr1.2:79846475-79846494 | MS.gene060311:intron | 35.0% |
| ! | ATGGTCGACTTATCTCATAA+AGG | + | chr1.2:79846036-79846055 | MS.gene060311:CDS | 35.0% |
| ! | ATTAGCATGACAGTTTTACC+TGG | - | chr1.2:79849372-79849391 | None:intergenic | 35.0% |
| ! | ATTCAGCATAAGGAGCATAT+AGG | - | chr1.2:79847947-79847966 | None:intergenic | 35.0% |
| ! | ATTTGAAAGGGGTGCAATTA+GGG | - | chr1.2:79848127-79848146 | None:intergenic | 35.0% |
| ! | CTGCCTAGTTTGTATTTGAA+AGG | - | chr1.2:79848140-79848159 | None:intergenic | 35.0% |
| ! | GCCTAGTTTGTATTTGAAAG+GGG | - | chr1.2:79848138-79848157 | None:intergenic | 35.0% |
| ! | TATTTGAAAGGGGTGCAATT+AGG | - | chr1.2:79848128-79848147 | None:intergenic | 35.0% |
| ! | TTTGATGACTGTGTTTGCTT+TGG | + | chr1.2:79846468-79846487 | MS.gene060311:intron | 35.0% |
| !! | GCCTGATTTGTAGTTTTTCT+TGG | - | chr1.2:79847337-79847356 | None:intergenic | 35.0% |
| !! | GGTGTGGTTTATTGTTTTTC+AGG | + | chr1.2:79846648-79846667 | MS.gene060311:intron | 35.0% |
| !! | TCCAAATGTTGGTGTTGAAA+GGG | + | chr1.2:79848262-79848281 | MS.gene060311:CDS | 35.0% |
| !! | TTCCAAATGTTGGTGTTGAA+AGG | + | chr1.2:79848261-79848280 | MS.gene060311:CDS | 35.0% |
| AAACGGGGCCTAAATCTTAT+AGG | + | chr1.2:79847264-79847283 | MS.gene060311:intron | 40.0% | |
| AACAACAGCTATTCCAGATG+CGG | - | chr1.2:79846211-79846230 | None:intergenic | 40.0% | |
| AACGGGGCCTAAATCTTATA+GGG | + | chr1.2:79847265-79847284 | MS.gene060311:intron | 40.0% | |
| AACTTGTGGACATCATAGCA+AGG | + | chr1.2:79848550-79848569 | MS.gene060311:CDS | 40.0% | |
| ACACCAACATTTGGAAGATC+AGG | - | chr1.2:79848257-79848276 | None:intergenic | 40.0% | |
| ACAGTACTCAGTCTTACACT+GGG | + | chr1.2:79846325-79846344 | MS.gene060311:CDS | 40.0% | |
| ACCGGTTAACGTTTACTCAA+AGG | - | chr1.2:79847630-79847649 | None:intergenic | 40.0% | |
| ACGTGTTTATAGAGTTCAGC+GGG | + | chr1.2:79848599-79848618 | MS.gene060311:CDS | 40.0% | |
| ACTACTTGTCCAGAGCTTAT+GGG | + | chr1.2:79849265-79849284 | MS.gene060311:CDS | 40.0% | |
| ACTCTATAAACACGTGTCCA+TGG | - | chr1.2:79848594-79848613 | None:intergenic | 40.0% | |
| ACTCTTGTAATACGTGGAAC+TGG | + | chr1.2:79848353-79848372 | MS.gene060311:CDS | 40.0% | |
| ACTGTCGCCATGATATAAAC+TGG | + | chr1.2:79847535-79847554 | MS.gene060311:intron | 40.0% | |
| AGGATAGGCACTAATAAGAG+AGG | - | chr1.2:79848999-79849018 | None:intergenic | 40.0% | |
| AGGTCAATTGAAGTGCAATG+AGG | - | chr1.2:79849583-79849602 | None:intergenic | 40.0% | |
| AGTTCCACGTATTACAAGAG+TGG | - | chr1.2:79848354-79848373 | None:intergenic | 40.0% | |
| ATACAAACTAGGCAGTAGGT+TGG | + | chr1.2:79848145-79848164 | MS.gene060311:intron | 40.0% | |
| ATGAAACATGGCCATGACAT+TGG | + | chr1.2:79849174-79849193 | MS.gene060311:intron | 40.0% | |
| ATGCCTGATCTTCCAAATGT+TGG | + | chr1.2:79848251-79848270 | MS.gene060311:CDS | 40.0% | |
| ATTAGCTCGAATGGAAGACT+TGG | + | chr1.2:79848680-79848699 | MS.gene060311:CDS | 40.0% | |
| CACGTGTTTATAGAGTTCAG+CGG | + | chr1.2:79848598-79848617 | MS.gene060311:CDS | 40.0% | |
| CATAGTGCAACCAAGTGTAT+TGG | + | chr1.2:79846805-79846824 | MS.gene060311:CDS | 40.0% | |
| CCAAATTAAACCAGAAGAGG+TGG | + | chr1.2:79848879-79848898 | MS.gene060311:CDS | 40.0% | |
| CTCTTGTAATACGTGGAACT+GGG | + | chr1.2:79848354-79848373 | MS.gene060311:CDS | 40.0% | |
| CTGCGACAAATGCTTTCTTA+CGG | + | chr1.2:79847740-79847759 | MS.gene060311:CDS | 40.0% | |
| GAAGGCAAAATATGCACAAC+AGG | - | chr1.2:79849088-79849107 | None:intergenic | 40.0% | |
| GCAGTAGACACAAATGTTAC+CGG | - | chr1.2:79846277-79846296 | None:intergenic | 40.0% | |
| GGACATGTTATTGGTATCCT+TGG | - | chr1.2:79849561-79849580 | None:intergenic | 40.0% | |
| GGAGTTTACAATCTCTGCAA+TGG | - | chr1.2:79846016-79846035 | None:intergenic | 40.0% | |
| GGCAATCATCTCAACAAGTT+TGG | - | chr1.2:79846127-79846146 | None:intergenic | 40.0% | |
| GGTCAATTGAAGTGCAATGA+GGG | - | chr1.2:79849582-79849601 | None:intergenic | 40.0% | |
| GTACAGCAGTTCCATAAACA+TGG | - | chr1.2:79849315-79849334 | None:intergenic | 40.0% | |
| GTGACAAAGTGCAGATTGAT+AGG | - | chr1.2:79847902-79847921 | None:intergenic | 40.0% | |
| GTTCCACGTATTACAAGAGT+GGG | - | chr1.2:79848353-79848372 | None:intergenic | 40.0% | |
| GTTCGTGAACTCCATGTTTA+TGG | + | chr1.2:79849301-79849320 | MS.gene060311:CDS | 40.0% | |
| TACAGTACTCAGTCTTACAC+TGG | + | chr1.2:79846324-79846343 | MS.gene060311:CDS | 40.0% | |
| TACCTCTTGTCTGCACATAA+GGG | - | chr1.2:79846506-79846525 | None:intergenic | 40.0% | |
| TCCCTTTCAACACCAACATT+TGG | - | chr1.2:79848266-79848285 | None:intergenic | 40.0% | |
| TGCAATGAGGGACATGTTAT+TGG | - | chr1.2:79849570-79849589 | None:intergenic | 40.0% | |
| TGCAGAGATTGTAAACTCCA+TGG | + | chr1.2:79846017-79846036 | MS.gene060311:CDS | 40.0% | |
| TGTTTATGGAACTGCTGTAC+CGG | + | chr1.2:79849315-79849334 | MS.gene060311:CDS | 40.0% | |
| TTAGCTCGAATGGAAGACTT+GGG | + | chr1.2:79848681-79848700 | MS.gene060311:CDS | 40.0% | |
| TTATGGTACGCTTCTTATGG+AGG | + | chr1.2:79849632-79849651 | MS.gene060311:CDS | 40.0% | |
| TTCCACGTATTACAAGAGTG+GGG | - | chr1.2:79848352-79848371 | None:intergenic | 40.0% | |
| TTTAGGTCACAGTGTAGACA+AGG | + | chr1.2:79846545-79846564 | MS.gene060311:CDS | 40.0% | |
| ! | CATCAGGATTAAAAGGCATG+TGG | + | chr1.2:79848473-79848492 | MS.gene060311:intron | 40.0% |
| ! | TATCTAGAACCAATCTCGTC+TGG | + | chr1.2:79848752-79848771 | MS.gene060311:intron | 40.0% |
| ! | TGAGTGGAATTGCTGAGTTT+TGG | + | chr1.2:79849457-79849476 | MS.gene060311:intron | 40.0% |
| !! | AGGGAGAATGGATTATATGG+AGG | + | chr1.2:79847284-79847303 | MS.gene060311:intron | 40.0% |
| !! | ATAGCTGTAATTTCTGGGGT+TGG | + | chr1.2:79849696-79849715 | MS.gene060311:CDS | 40.0% |
| !! | CAGGCTATCAAGATGGATTT+TGG | + | chr1.2:79847352-79847371 | MS.gene060311:intron | 40.0% |
| !! | CCACCTCTTCTGGTTTAATT+TGG | - | chr1.2:79848882-79848901 | None:intergenic | 40.0% |
| !! | CTTTATGAGCTCTGGAAAAC+TGG | + | chr1.2:79848377-79848396 | MS.gene060311:CDS | 40.0% |
| !! | TTGTTGGTTTGTTACGACTG+CGG | + | chr1.2:79849227-79849246 | MS.gene060311:CDS | 40.0% |
| !!! | TGTAGCTGATTGTTTTTGCC+TGG | + | chr1.2:79847844-79847863 | MS.gene060311:CDS | 40.0% |
| !!! | TTTTGAATGGAGGAGTGCTT+TGG | + | chr1.2:79846901-79846920 | MS.gene060311:intron | 40.0% |
| AACATTTGTGTCTACTGCCC+TGG | + | chr1.2:79846279-79846298 | MS.gene060311:CDS | 45.0% | |
| AACCCTTATGTGCAGACAAG+AGG | + | chr1.2:79846501-79846520 | MS.gene060311:CDS | 45.0% | |
| AAGTAATCACGGTAATCCGC+CGG | - | chr1.2:79846712-79846731 | None:intergenic | 45.0% | |
| AGACAGCACAACCAATGTCA+TGG | - | chr1.2:79849188-79849207 | None:intergenic | 45.0% | |
| AGGAGGCCAGATTATTGTCT+TGG | + | chr1.2:79847710-79847729 | MS.gene060311:intron | 45.0% | |
| ATGATGTCCACAAGTTGCTC+AGG | - | chr1.2:79848546-79848565 | None:intergenic | 45.0% | |
| CAACATCCTCGTAAGTGCTT+TGG | - | chr1.2:79847790-79847809 | None:intergenic | 45.0% | |
| CACGTGAAAGGCCATACTTA+CGG | - | chr1.2:79846101-79846120 | None:intergenic | 45.0% | |
| CACGTGCTTCTTCTTCACTA+AGG | - | chr1.2:79845987-79846006 | None:intergenic | 45.0% | |
| CACTACTTGTCCAGAGCTTA+TGG | + | chr1.2:79849264-79849283 | MS.gene060311:CDS | 45.0% | |
| CATAGCAAGGATCCTTGCAA+TGG | + | chr1.2:79848563-79848582 | MS.gene060311:CDS | 45.0% | |
| CTACCTCTTGTCTGCACATA+AGG | - | chr1.2:79846507-79846526 | None:intergenic | 45.0% | |
| CTATAAACACGTGTCCATGG+AGG | - | chr1.2:79848591-79848610 | None:intergenic | 45.0% | |
| CTTATGTGCAGACAAGAGGT+AGG | + | chr1.2:79846505-79846524 | MS.gene060311:CDS | 45.0% | |
| CTTGAGCAGGATATCCTTGT+TGG | + | chr1.2:79849211-79849230 | MS.gene060311:intron | 45.0% | |
| GAACACTTACCCATAAGCTC+TGG | - | chr1.2:79849277-79849296 | None:intergenic | 45.0% | |
| GCAGTCGTAACAAACCAACA+AGG | - | chr1.2:79849228-79849247 | None:intergenic | 45.0% | |
| GGAGGCCAGATTATTGTCTT+GGG | + | chr1.2:79847711-79847730 | MS.gene060311:intron | 45.0% | |
| GGAGTTAGCATTAGCTCGAA+TGG | + | chr1.2:79848671-79848690 | MS.gene060311:CDS | 45.0% | |
| GGGTTATGGTACGCTTCTTA+TGG | + | chr1.2:79849629-79849648 | MS.gene060311:intron | 45.0% | |
| GGTCGAGAAAGGGAATCTAA+GGG | + | chr1.2:79848650-79848669 | MS.gene060311:CDS | 45.0% | |
| GTAGACACAAATGTTACCGG+TGG | - | chr1.2:79846274-79846293 | None:intergenic | 45.0% | |
| GTCACAGTGTAGACAAGGTT+TGG | + | chr1.2:79846550-79846569 | MS.gene060311:intron | 45.0% | |
| GTCATATGAAGATACACGGC+AGG | + | chr1.2:79848951-79848970 | MS.gene060311:CDS | 45.0% | |
| GTTGCTCGTGACACTAATAG+AGG | + | chr1.2:79847806-79847825 | MS.gene060311:CDS | 45.0% | |
| TAAGAGAGGCTGAGGAAAGA+AGG | - | chr1.2:79848985-79849004 | None:intergenic | 45.0% | |
| TACCCCACTCTTGTAATACG+TGG | + | chr1.2:79848347-79848366 | MS.gene060311:CDS | 45.0% | |
| TGAGGCCCAAGACAATAATC+TGG | - | chr1.2:79847719-79847738 | None:intergenic | 45.0% | |
| TGGAACTTTCATGTCCCTTC+CGG | + | chr1.2:79846690-79846709 | MS.gene060311:CDS | 45.0% | |
| TGGGGAGAAGACTTGTAGTA+AGG | + | chr1.2:79846929-79846948 | MS.gene060311:intron | 45.0% | |
| TTATCCACCTGAGCAACTTG+TGG | + | chr1.2:79848536-79848555 | MS.gene060311:CDS | 45.0% | |
| TTCTGACAAGCTACAACACC+AGG | + | chr1.2:79849351-79849370 | MS.gene060311:CDS | 45.0% | |
| TTCTTACGGTTGTACGCGAT+TGG | + | chr1.2:79847754-79847773 | MS.gene060311:CDS | 45.0% | |
| TTGTTACGACTGCGGAAATG+TGG | + | chr1.2:79849235-79849254 | MS.gene060311:CDS | 45.0% | |
| ! | AAGCCCATCTGCTCTAAACA+AGG | - | chr1.2:79848321-79848340 | None:intergenic | 45.0% |
| ! | AGCCCATCTGCTCTAAACAA+GGG | - | chr1.2:79848320-79848339 | None:intergenic | 45.0% |
| ! | AGTCCCTTGTTTAGAGCAGA+TGG | + | chr1.2:79848314-79848333 | MS.gene060311:CDS | 45.0% |
| ! | GCTCTGGACAAGTAGTGTTA+CGG | - | chr1.2:79849261-79849280 | None:intergenic | 45.0% |
| ! | GTCCCTTGTTTAGAGCAGAT+GGG | + | chr1.2:79848315-79848334 | MS.gene060311:CDS | 45.0% |
| ! | TTCACGATGCAGCTTTTCCA+AGG | + | chr1.2:79849541-79849560 | MS.gene060311:intron | 45.0% |
| ! | TTTTGCCTGGCTAAAGATGC+CGG | + | chr1.2:79847857-79847876 | MS.gene060311:CDS | 45.0% |
| !! | CGTAAGAAAGCATTTGTCGC+AGG | - | chr1.2:79847742-79847761 | None:intergenic | 45.0% |
| !! | GAGCGTTGAGATCAACTTTG+TGG | - | chr1.2:79846062-79846081 | None:intergenic | 45.0% |
| !! | TGTTGGTGTTGAAAGGGACA+TGG | + | chr1.2:79848268-79848287 | MS.gene060311:CDS | 45.0% |
| AAATCAGAGTCAGGACCACC+AGG | - | chr1.2:79846300-79846319 | None:intergenic | 50.0% | |
| AACTTTCATGTCCCTTCCGG+CGG | + | chr1.2:79846693-79846712 | MS.gene060311:CDS | 50.0% | |
| AATCAGAGTCAGGACCACCA+GGG | - | chr1.2:79846299-79846318 | None:intergenic | 50.0% | |
| ATGTCCACAAGTTGCTCAGG+TGG | - | chr1.2:79848543-79848562 | None:intergenic | 50.0% | |
| ATTTGTGTCTACTGCCCTGG+TGG | + | chr1.2:79846282-79846301 | MS.gene060311:CDS | 50.0% | |
| CAAGTTTGGGTGCACGTGAA+AGG | - | chr1.2:79846113-79846132 | None:intergenic | 50.0% | |
| CACCTCTGCCAATGTAGAAG+AGG | + | chr1.2:79846765-79846784 | MS.gene060311:CDS | 50.0% | |
| CAGCTATTCCAGATGCGGTT+CGG | - | chr1.2:79846206-79846225 | None:intergenic | 50.0% | |
| CGAACAAGTTCCACCTCTTC+TGG | - | chr1.2:79848892-79848911 | None:intergenic | 50.0% | |
| CGAATTGCACGCATACTGGT+AGG | - | chr1.2:79846357-79846376 | None:intergenic | 50.0% | |
| CTCTGCCAATGTAGAAGAGG+CGG | + | chr1.2:79846768-79846787 | MS.gene060311:CDS | 50.0% | |
| CTTCTTCTTCACTAAGGCCG+TGG | - | chr1.2:79845981-79846000 | None:intergenic | 50.0% | |
| GACACAAATGTTACCGGTGG+TGG | - | chr1.2:79846271-79846290 | None:intergenic | 50.0% | |
| GGCACTAATAAGAGAGGCTG+AGG | - | chr1.2:79848993-79849012 | None:intergenic | 50.0% | |
| GGGAAGAAGAACCTCTCGTT+CGG | - | chr1.2:79846163-79846182 | None:intergenic | 50.0% | |
| GGGTCGAGAAAGGGAATCTA+AGG | + | chr1.2:79848649-79848668 | MS.gene060311:CDS | 50.0% | |
| GGTTGTACGCGATTGGAGAT+TGG | + | chr1.2:79847761-79847780 | MS.gene060311:CDS | 50.0% | |
| TACCTGGATTCCAGCTTCTC+TGG | - | chr1.2:79848730-79848749 | None:intergenic | 50.0% | |
| TCCTTGCAATGGTACCTCCA+TGG | + | chr1.2:79848574-79848593 | MS.gene060311:CDS | 50.0% | |
| TCGTTCGGAGTCTGGTAAAG+CGG | - | chr1.2:79846148-79846167 | None:intergenic | 50.0% | |
| TGAAACCGGCATCTTTAGCC+AGG | - | chr1.2:79847865-79847884 | None:intergenic | 50.0% | |
| TGGTACGCTTCTTATGGAGG+AGG | + | chr1.2:79849635-79849654 | MS.gene060311:CDS | 50.0% | |
| TGTGCTGTCTTCTCTTGAGC+AGG | + | chr1.2:79849198-79849217 | MS.gene060311:intron | 50.0% | |
| TTCTTATGGAGGAGGCTGAG+CGG | + | chr1.2:79849643-79849662 | MS.gene060311:CDS | 50.0% | |
| TTTACCAGACTCCGAACGAG+AGG | + | chr1.2:79846149-79846168 | MS.gene060311:CDS | 50.0% | |
| ! | CCTGGAAAAGGAGGCTTTGA+AGG | + | chr1.2:79845955-79845974 | MS.gene060311:CDS | 50.0% |
| ! | CCTTCAAAGCCTCCTTTTCC+AGG | - | chr1.2:79845958-79845977 | None:intergenic | 50.0% |
| ! | GAACTGGGCTTTATGAGCTC+TGG | + | chr1.2:79848369-79848388 | MS.gene060311:CDS | 50.0% |
| ! | GGGTGAGTCTAGTTTGTAGC+TGG | + | chr1.2:79849054-79849073 | MS.gene060311:intron | 50.0% |
| ! | GTCTAGTTTGTAGCTGGCAC+TGG | + | chr1.2:79849060-79849079 | MS.gene060311:intron | 50.0% |
| ! | TATTCCAGATGCGGTTCGGA+CGG | - | chr1.2:79846202-79846221 | None:intergenic | 50.0% |
| ! | TCTGCTGCTTGCCGTAAGTA+TGG | + | chr1.2:79846087-79846106 | MS.gene060311:CDS | 50.0% |
| ! | TGGAGTCCAAAGCACTTACG+AGG | + | chr1.2:79847781-79847800 | MS.gene060311:CDS | 50.0% |
| !! | AAAGGAGGCTTTGAAGGCCA+CGG | + | chr1.2:79845961-79845980 | MS.gene060311:CDS | 50.0% |
| !! | AATGGTGGCGGAGGCAAAAA+AGG | + | chr1.2:79845924-79845943 | MS.gene060311:CDS | 50.0% |
| !! | ATGAGCTCTGGAAAACTGGC+AGG | + | chr1.2:79848381-79848400 | MS.gene060311:CDS | 50.0% |
| !! | GAAAGCATTTGTCGCAGGTG+AGG | - | chr1.2:79847737-79847756 | None:intergenic | 50.0% |
| !! | GAACTGCTGTACCGGTTCAT+GGG | + | chr1.2:79849323-79849342 | MS.gene060311:CDS | 50.0% |
| !! | GGCTAAAGATGCCGGTTTCA+AGG | + | chr1.2:79847865-79847884 | MS.gene060311:CDS | 50.0% |
| !! | TCCATGGAGGTACCATTGCA+AGG | - | chr1.2:79848578-79848597 | None:intergenic | 50.0% |
| AATCACGGTAATCCGCCGGA+AGG | - | chr1.2:79846708-79846727 | None:intergenic | 55.0% | |
| AGAACCTCTCGTTCGGAGTC+TGG | - | chr1.2:79846156-79846175 | None:intergenic | 55.0% | |
| ATCACGGTAATCCGCCGGAA+GGG | - | chr1.2:79846707-79846726 | None:intergenic | 55.0% | |
| ATTCCCTTTCTCGACCCCAG+AGG | - | chr1.2:79848646-79848665 | None:intergenic | 55.0% | |
| CGCCTCTTCTACATTGGCAG+AGG | - | chr1.2:79846770-79846789 | None:intergenic | 55.0% | |
| CGCTCGAATTGCACGCATAC+TGG | - | chr1.2:79846361-79846380 | None:intergenic | 55.0% | |
| CGTCACCGCCTCTTCTACAT+TGG | - | chr1.2:79846776-79846795 | None:intergenic | 55.0% | |
| GACCAGAGAAGCTGGAATCC+AGG | + | chr1.2:79848725-79848744 | MS.gene060311:CDS | 55.0% | |
| GATGTTCGGACCAGAGAAGC+TGG | + | chr1.2:79848717-79848736 | MS.gene060311:CDS | 55.0% | |
| GCAATGTGAGGGCAACGATG+AGG | - | chr1.2:79846249-79846268 | None:intergenic | 55.0% | |
| GCGGGATATTCCGATGCCTT+TGG | + | chr1.2:79848617-79848636 | MS.gene060311:CDS | 55.0% | |
| GTATGCGTGCAATTCGAGCG+AGG | + | chr1.2:79846361-79846380 | MS.gene060311:CDS | 55.0% | |
| TCAGAATCCCGCCCATGAAC+CGG | - | chr1.2:79849337-79849356 | None:intergenic | 55.0% | |
| ! | AAGCCTCCTTTTCCAGGACG+TGG | - | chr1.2:79845952-79845971 | None:intergenic | 55.0% |
| ! | AAGGCACCACGTCCTGGAAA+AGG | + | chr1.2:79845943-79845962 | MS.gene060311:CDS | 55.0% |
| ! | ATTCCAGATGCGGTTCGGAC+GGG | - | chr1.2:79846201-79846220 | None:intergenic | 55.0% |
| ! | CCAGAGGTCACCAAAGGCAT+CGG | - | chr1.2:79848630-79848649 | None:intergenic | 55.0% |
| ! | CGATGCCTTTGGTGACCTCT+GGG | + | chr1.2:79848628-79848647 | MS.gene060311:CDS | 55.0% |
| ! | GATGCCTTTGGTGACCTCTG+GGG | + | chr1.2:79848629-79848648 | MS.gene060311:CDS | 55.0% |
| ! | TACCGGTGGTGGCAATGTGA+GGG | - | chr1.2:79846260-79846279 | None:intergenic | 55.0% |
| ! | TTACCGGTGGTGGCAATGTG+AGG | - | chr1.2:79846261-79846280 | None:intergenic | 55.0% |
| !! | ACGGGTTTGGCTCGGAGTTT+GGG | - | chr1.2:79846183-79846202 | None:intergenic | 55.0% |
| !! | AGGAGTGCTTTGGACACGTG+GGG | + | chr1.2:79846911-79846930 | MS.gene060311:intron | 55.0% |
| !! | GAGGAGTGCTTTGGACACGT+GGG | + | chr1.2:79846910-79846929 | MS.gene060311:intron | 55.0% |
| !! | GCAAAAAAGGCACCACGTCC+TGG | + | chr1.2:79845937-79845956 | MS.gene060311:CDS | 55.0% |
| !! | GGAACTGCTGTACCGGTTCA+TGG | + | chr1.2:79849322-79849341 | MS.gene060311:CDS | 55.0% |
| !! | TGACCTCTGGGGTCGAGAAA+GGG | + | chr1.2:79848640-79848659 | MS.gene060311:CDS | 55.0% |
| AAACCCGTCCGAACCGCATC+TGG | + | chr1.2:79846195-79846214 | MS.gene060311:CDS | 60.0% | |
| GCACCACGTCCTGGAAAAGG+AGG | + | chr1.2:79845946-79845965 | MS.gene060311:CDS | 60.0% | |
| GCGTGCAATTCGAGCGAGGT+AGG | + | chr1.2:79846365-79846384 | MS.gene060311:intron | 60.0% | |
| TCGACCCCAGAGGTCACCAA+AGG | - | chr1.2:79848636-79848655 | None:intergenic | 60.0% | |
| TGCCCTCACATTGCCACCAC+CGG | + | chr1.2:79846255-79846274 | MS.gene060311:CDS | 60.0% | |
| ! | AGATGCGGTTCGGACGGGTT+TGG | - | chr1.2:79846196-79846215 | None:intergenic | 60.0% |
| ! | CCGATGCCTTTGGTGACCTC+TGG | + | chr1.2:79848627-79848646 | MS.gene060311:CDS | 60.0% |
| !! | CTGCTGTACCGGTTCATGGG+CGG | + | chr1.2:79849326-79849345 | MS.gene060311:CDS | 60.0% |
| !! | GACGGGTTTGGCTCGGAGTT+TGG | - | chr1.2:79846184-79846203 | None:intergenic | 60.0% |
| !! | GGAGGAGTGCTTTGGACACG+TGG | + | chr1.2:79846909-79846928 | MS.gene060311:intron | 60.0% |
| !! | GTGACCTCTGGGGTCGAGAA+AGG | + | chr1.2:79848639-79848658 | MS.gene060311:CDS | 60.0% |
| !! | TGCTGTACCGGTTCATGGGC+GGG | + | chr1.2:79849327-79849346 | MS.gene060311:CDS | 60.0% |
| ! | CGGTTCGGACGGGTTTGGCT+CGG | - | chr1.2:79846191-79846210 | None:intergenic | 65.0% |
| !! | GGCAGCTGCAATGGTGGCGG+AGG | + | chr1.2:79845915-79845934 | MS.gene060311:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 79845913 | 79849788 | 79845913 | ID=MS.gene060311 |
| chr1.2 | mRNA | 79845913 | 79849788 | 79845913 | ID=MS.gene060311.t1;Parent=MS.gene060311 |
| chr1.2 | exon | 79845913 | 79846382 | 79845913 | ID=MS.gene060311.t1.exon1;Parent=MS.gene060311.t1 |
| chr1.2 | CDS | 79845913 | 79846382 | 79845913 | ID=cds.MS.gene060311.t1;Parent=MS.gene060311.t1 |
| chr1.2 | exon | 79846497 | 79846566 | 79846497 | ID=MS.gene060311.t1.exon2;Parent=MS.gene060311.t1 |
| chr1.2 | CDS | 79846497 | 79846566 | 79846497 | ID=cds.MS.gene060311.t1;Parent=MS.gene060311.t1 |
| chr1.2 | exon | 79846670 | 79846842 | 79846670 | ID=MS.gene060311.t1.exon3;Parent=MS.gene060311.t1 |
| chr1.2 | CDS | 79846670 | 79846842 | 79846670 | ID=cds.MS.gene060311.t1;Parent=MS.gene060311.t1 |
| chr1.2 | exon | 79847712 | 79847886 | 79847712 | ID=MS.gene060311.t1.exon4;Parent=MS.gene060311.t1 |
| chr1.2 | CDS | 79847712 | 79847886 | 79847712 | ID=cds.MS.gene060311.t1;Parent=MS.gene060311.t1 |
| chr1.2 | exon | 79848236 | 79848402 | 79848236 | ID=MS.gene060311.t1.exon5;Parent=MS.gene060311.t1 |
| chr1.2 | CDS | 79848236 | 79848402 | 79848236 | ID=cds.MS.gene060311.t1;Parent=MS.gene060311.t1 |
| chr1.2 | exon | 79848527 | 79848746 | 79848527 | ID=MS.gene060311.t1.exon6;Parent=MS.gene060311.t1 |
| chr1.2 | CDS | 79848527 | 79848746 | 79848527 | ID=cds.MS.gene060311.t1;Parent=MS.gene060311.t1 |
| chr1.2 | exon | 79848868 | 79848972 | 79848868 | ID=MS.gene060311.t1.exon7;Parent=MS.gene060311.t1 |
| chr1.2 | CDS | 79848868 | 79848972 | 79848868 | ID=cds.MS.gene060311.t1;Parent=MS.gene060311.t1 |
| chr1.2 | exon | 79849220 | 79849372 | 79849220 | ID=MS.gene060311.t1.exon8;Parent=MS.gene060311.t1 |
| chr1.2 | CDS | 79849220 | 79849372 | 79849220 | ID=cds.MS.gene060311.t1;Parent=MS.gene060311.t1 |
| chr1.2 | exon | 79849630 | 79849788 | 79849630 | ID=MS.gene060311.t1.exon9;Parent=MS.gene060311.t1 |
| chr1.2 | CDS | 79849630 | 79849788 | 79849630 | ID=cds.MS.gene060311.t1;Parent=MS.gene060311.t1 |
| Gene Sequence |
| Protein sequence |
