Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73248.t1 | XP_013454911.1 | 95.5 | 532 | 24 | 0 | 1 | 532 | 1 | 532 | 2.20E-305 | 1057.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73248.t1 | Q3HRQ2 | 72.4 | 514 | 137 | 2 | 22 | 531 | 9 | 521 | 4.0e-226 | 785.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73248.t1 | A0A072UGT2 | 95.5 | 532 | 24 | 0 | 1 | 532 | 1 | 532 | 1.6e-305 | 1057.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050692 | MS.gene73248 | 0.815684 | 8.15E-52 | -1.69E-46 |
| MS.gene051509 | MS.gene73248 | 0.80461 | 1.99E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene73248 | 0.81677 | 4.66E-52 | -1.69E-46 |
| MS.gene059034 | MS.gene73248 | 0.811432 | 7.02E-51 | -1.69E-46 |
| MS.gene060313 | MS.gene73248 | 0.807195 | 5.69E-50 | -1.69E-46 |
| MS.gene060315 | MS.gene73248 | 0.815071 | 1.12E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene73248 | 0.808891 | 2.48E-50 | -1.69E-46 |
| MS.gene061171 | MS.gene73248 | 0.802557 | 5.30E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42280 | MS.gene73248 | PPI |
| MS.gene27027 | MS.gene73248 | PPI |
| MS.gene69423 | MS.gene73248 | PPI |
| MS.gene73248 | MS.gene82837 | PPI |
| MS.gene014446 | MS.gene73248 | PPI |
| MS.gene63972 | MS.gene73248 | PPI |
| MS.gene73248 | MS.gene064736 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73248.t1 | MTR_4g019520 | 95.489 | 532 | 24 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1004 |
| MS.gene73248.t1 | MTR_7g114530 | 46.845 | 523 | 257 | 11 | 28 | 531 | 49 | 569 | 1.50e-154 | 453 |
| MS.gene73248.t1 | MTR_1g023570 | 45.367 | 518 | 264 | 11 | 28 | 531 | 30 | 542 | 6.35e-151 | 443 |
| MS.gene73248.t1 | MTR_5g038410 | 43.889 | 540 | 248 | 14 | 42 | 531 | 1 | 535 | 3.36e-148 | 436 |
| MS.gene73248.t1 | MTR_3g113210 | 44.782 | 527 | 263 | 13 | 28 | 531 | 33 | 554 | 1.36e-147 | 435 |
| MS.gene73248.t1 | MTR_6g004960 | 44.316 | 519 | 266 | 10 | 32 | 531 | 1 | 515 | 4.04e-147 | 432 |
| MS.gene73248.t1 | MTR_8g102900 | 40.875 | 526 | 286 | 10 | 28 | 532 | 112 | 633 | 1.69e-136 | 409 |
| MS.gene73248.t1 | MTR_3g075520 | 42.941 | 510 | 271 | 10 | 42 | 532 | 1 | 509 | 3.61e-136 | 404 |
| MS.gene73248.t1 | MTR_6g088300 | 41.353 | 532 | 283 | 11 | 28 | 532 | 56 | 585 | 3.64e-133 | 399 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73248.t1 | AT3G53950 | 69.680 | 531 | 152 | 4 | 8 | 531 | 15 | 543 | 0.0 | 771 |
| MS.gene73248.t1 | AT1G75620 | 47.969 | 517 | 253 | 11 | 28 | 532 | 35 | 547 | 3.95e-160 | 467 |
| MS.gene73248.t1 | AT3G57620 | 45.736 | 516 | 260 | 11 | 30 | 531 | 37 | 546 | 5.24e-158 | 461 |
| MS.gene73248.t1 | AT1G19900 | 44.894 | 519 | 269 | 10 | 28 | 531 | 31 | 547 | 1.16e-149 | 440 |
| MS.gene73248.t1 | AT1G14430 | 45.355 | 549 | 274 | 14 | 6 | 531 | 19 | 564 | 4.26e-148 | 437 |
| MS.gene73248.t1 | AT5G19580 | 41.777 | 529 | 283 | 13 | 22 | 531 | 71 | 593 | 9.43e-132 | 396 |
| MS.gene73248.t1 | AT1G67290 | 41.333 | 525 | 283 | 13 | 27 | 531 | 95 | 614 | 2.12e-128 | 388 |
Find 163 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTATTGAAGTGAATTT+AGG | 0.266676 | 4.1:+78690585 | MS.gene73248:CDS |
| ACACCATACAATACCGTTTC+AGG | 0.285927 | 4.1:-78690522 | None:intergenic |
| ACCGGTTGGGTTACGGTTCA+TGG | 0.288813 | 4.1:+78690293 | MS.gene73248:CDS |
| AATCACACGGGTTGAATATT+CGG | 0.293301 | 4.1:-78689606 | None:intergenic |
| AGTGTGGCACGTGCTGATTT+TGG | 0.296052 | 4.1:-78689271 | None:intergenic |
| TAACGAAAACCGTGTGGTTC+GGG | 0.306132 | 4.1:+78689912 | MS.gene73248:CDS |
| TGAACGGAACACGGATATTC+CGG | 0.311507 | 4.1:+78690065 | MS.gene73248:CDS |
| TTGAGGCTATGCCTGCGTTT+TGG | 0.321803 | 4.1:-78689318 | None:intergenic |
| TAAAGTCTTGGCACAGTGCC+TGG | 0.354244 | 4.1:-78690324 | None:intergenic |
| ATCCGACCCGGTTTGGGAAA+TGG | 0.361268 | 4.1:+78690122 | MS.gene73248:CDS |
| GACGGGATCCGACCCGGTTT+GGG | 0.365091 | 4.1:+78690116 | MS.gene73248:CDS |
| TTAACGAAAACCGTGTGGTT+CGG | 0.369932 | 4.1:+78689911 | MS.gene73248:CDS |
| CGACGGGATCCGACCCGGTT+TGG | 0.384357 | 4.1:+78690115 | MS.gene73248:CDS |
| ACCGACACATGGTGCTCTTC+TGG | 0.386972 | 4.1:+78689520 | MS.gene73248:CDS |
| TCGGGTTTACCCGGAGTTAA+CGG | 0.387975 | 4.1:+78689930 | MS.gene73248:CDS |
| CGGGTTTACCCGGAGTTAAC+GGG | 0.388275 | 4.1:+78689931 | MS.gene73248:CDS |
| ATTATCCATTTGTGTATCTT+CGG | 0.390138 | 4.1:-78689812 | None:intergenic |
| CGTGTTCGCAAACACGAAAT+CGG | 0.395462 | 4.1:+78689876 | MS.gene73248:CDS |
| TGAGAGAATAATGGGTGATA+TGG | 0.406764 | 4.1:+78690158 | MS.gene73248:CDS |
| GTCAACGATTGGTCAAGCTT+GGG | 0.407088 | 4.1:+78690643 | MS.gene73248:CDS |
| TTTATATCGACCTGGTGAAC+CGG | 0.410632 | 4.1:+78690275 | MS.gene73248:CDS |
| TGCACCGCCAGGTTATTATA+TGG | 0.418499 | 4.1:+78690737 | MS.gene73248:CDS |
| TTATCCGTCGGCGGGTAGTT+CGG | 0.421655 | 4.1:+78689966 | MS.gene73248:CDS |
| TTCAACCCGTGTGATTCAAC+CGG | 0.427789 | 4.1:+78689613 | MS.gene73248:CDS |
| TATGCCGTTTGAGAGAATAA+TGG | 0.427793 | 4.1:+78690149 | MS.gene73248:CDS |
| TCGTGTTTGCGAACACGAAA+AGG | 0.432697 | 4.1:-78689870 | None:intergenic |
| ACTTCAATAATTCCCACAAC+TGG | 0.433336 | 4.1:-78690576 | None:intergenic |
| GTTGGCTCTGCGGTGGTCGA+TGG | 0.442039 | 4.1:+78690666 | MS.gene73248:CDS |
| TCTGGTTCATTTCTTCCAAA+CGG | 0.444311 | 4.1:+78689538 | MS.gene73248:CDS |
| TCTTCGGTTTCTTGCAGAAA+CGG | 0.444669 | 4.1:-78689796 | None:intergenic |
| TTCGACGGCGAATTTGTTAC+CGG | 0.447108 | 4.1:+78690350 | MS.gene73248:CDS |
| ACTAGAAGCTCCCACGTGCC+GGG | 0.449893 | 4.1:-78689295 | None:intergenic |
| ATTCAACCGGGTCATGCGAT+TGG | 0.450450 | 4.1:+78689626 | MS.gene73248:CDS |
| GACTAGAAGCTCCCACGTGC+CGG | 0.450544 | 4.1:-78689296 | None:intergenic |
| GGCGGGTAGTTCGGTGATGC+TGG | 0.450658 | 4.1:+78689975 | MS.gene73248:CDS |
| ATATCCTCCATTTCCCAAAC+CGG | 0.453250 | 4.1:-78690129 | None:intergenic |
| ATCGACCTGGTGAACCGGTT+GGG | 0.456060 | 4.1:+78690280 | MS.gene73248:CDS |
| ATTCCGGCACATGGGAGTTG+TGG | 0.456259 | 4.1:+78690081 | MS.gene73248:CDS |
| CTCCCACGTGCCGGGGAGTG+TGG | 0.460957 | 4.1:-78689287 | None:intergenic |
| ATGCCGTTTGAGAGAATAAT+GGG | 0.461994 | 4.1:+78690150 | MS.gene73248:CDS |
| CTGGTGAACCGGTTGGGTTA+CGG | 0.466700 | 4.1:+78690286 | MS.gene73248:CDS |
| ACCATGAACCGTAACCCAAC+CGG | 0.468515 | 4.1:-78690294 | None:intergenic |
| AAACCGGTGGTGACTTAGAC+GGG | 0.468824 | 4.1:+78689572 | MS.gene73248:CDS |
| CCGTGTGGTTCGGGTTTACC+CGG | 0.471927 | 4.1:+78689921 | MS.gene73248:CDS |
| TTCCGGCACATGGGAGTTGT+GGG | 0.474976 | 4.1:+78690082 | MS.gene73248:CDS |
| TTCACCAGGTCGATATAAAA+CGG | 0.477041 | 4.1:-78690271 | None:intergenic |
| GGGTTGGACCGATGTTGGTT+CGG | 0.478378 | 4.1:-78689384 | None:intergenic |
| CTCGGTCCACCCGTTAACTC+CGG | 0.479222 | 4.1:-78689940 | None:intergenic |
| TCAGGCACTTCGAATATCTC+AGG | 0.481224 | 4.1:-78690504 | None:intergenic |
| TTCAACCGGGTCATGCGATT+GGG | 0.484013 | 4.1:+78689627 | MS.gene73248:CDS |
| CCGGTTCACTAAAACCAAAC+CGG | 0.484133 | 4.1:+78689432 | MS.gene73248:CDS |
| GTGCAACCATCCCACTCGGT+GGG | 0.485681 | 4.1:-78690719 | None:intergenic |
| GATGCGGTGGTTGTTGTTTG+TGG | 0.487191 | 4.1:+78690018 | MS.gene73248:CDS |
| AGTGGGATGGTTGCACCGCC+AGG | 0.487641 | 4.1:+78690726 | MS.gene73248:CDS |
| GGTCAACGATTGGTCAAGCT+TGG | 0.488405 | 4.1:+78690642 | MS.gene73248:CDS |
| CTCTTCCCAATCGCATGACC+CGG | 0.491639 | 4.1:-78689632 | None:intergenic |
| ATGAGCGTAACAATCCGGTT+TGG | 0.492855 | 4.1:-78689446 | None:intergenic |
| CGAATTTGTTACCGGATGGA+AGG | 0.493268 | 4.1:+78690358 | MS.gene73248:CDS |
| TCGAATTAAGCGAAGGTCGT+TGG | 0.493274 | 4.1:+78689665 | MS.gene73248:CDS |
| GCATATTACAAAGAGAGAAA+TGG | 0.497041 | 4.1:-78689224 | None:intergenic |
| AGTGTGCCTTTGCCAGTTGT+GGG | 0.497685 | 4.1:+78690564 | MS.gene73248:CDS |
| CGATTGGTCAAGCTTGGGGT+TGG | 0.500671 | 4.1:+78690648 | MS.gene73248:CDS |
| CGATGTTGGTTCGGTCTAAG+AGG | 0.501043 | 4.1:-78689375 | None:intergenic |
| TGGTCGATGGTGTTGGAAGG+TGG | 0.502054 | 4.1:+78690679 | MS.gene73248:CDS |
| TCGGTGATGCTGGCTTTAGA+AGG | 0.505095 | 4.1:+78689985 | MS.gene73248:CDS |
| GAGTGTGCCTTTGCCAGTTG+TGG | 0.506333 | 4.1:+78690563 | MS.gene73248:CDS |
| CAAACCGGTGGTGACTTAGA+CGG | 0.512760 | 4.1:+78689571 | MS.gene73248:CDS |
| TCACCAGGTCGATATAAAAC+GGG | 0.517151 | 4.1:-78690270 | None:intergenic |
| ATGATGATGACGGAACCATC+TGG | 0.518424 | 4.1:-78689709 | None:intergenic |
| GTGCCACACTCCCCGGCACG+TGG | 0.518659 | 4.1:+78689284 | MS.gene73248:CDS |
| GTTTGTAAAAGTGAACCGTT+TGG | 0.519490 | 4.1:-78689553 | None:intergenic |
| TATCGACCTGGTGAACCGGT+TGG | 0.521135 | 4.1:+78690279 | MS.gene73248:CDS |
| AACACGGATATTCCGGCACA+TGG | 0.521789 | 4.1:+78690072 | MS.gene73248:CDS |
| CGCCCACAACTCCCATGTGC+CGG | 0.522248 | 4.1:-78690084 | None:intergenic |
| CGTAACCCAACCGGTTCACC+AGG | 0.522888 | 4.1:-78690285 | None:intergenic |
| TCACCCATTATTCTCTCAAA+CGG | 0.523026 | 4.1:-78690153 | None:intergenic |
| GTTTGTGGCGGTGCTCAATA+CGG | 0.523510 | 4.1:+78690033 | MS.gene73248:CDS |
| CGGTGGTCGATGGTGTTGGA+AGG | 0.524502 | 4.1:+78690676 | MS.gene73248:CDS |
| AAGGTGGAGGATCCGATGTA+TGG | 0.526774 | 4.1:+78690695 | MS.gene73248:CDS |
| GTCATCATCATCGGTGGAAG+AGG | 0.527761 | 4.1:+78689721 | MS.gene73248:CDS |
| TCGGTCCACCCGTTAACTCC+GGG | 0.528086 | 4.1:-78689939 | None:intergenic |
| AGAAACCGAAGATACACAAA+TGG | 0.528804 | 4.1:+78689807 | MS.gene73248:CDS |
| TTTACGGGTTGGACCGATGT+TGG | 0.532259 | 4.1:-78689389 | None:intergenic |
| ACTGAATGAGCGTAACAATC+CGG | 0.533549 | 4.1:-78689451 | None:intergenic |
| TCTGCGGTGGTCGATGGTGT+TGG | 0.534258 | 4.1:+78690672 | MS.gene73248:CDS |
| ATTATAAATGGAGCTATGAA+AGG | 0.537384 | 4.1:+78690207 | MS.gene73248:CDS |
| TCAGCACGTGCCACACTCCC+CGG | 0.545385 | 4.1:+78689277 | MS.gene73248:CDS |
| CAAGCTTGGGGTTGGCTCTG+CGG | 0.545621 | 4.1:+78690656 | MS.gene73248:CDS |
| AAACGGTATTGTATGGTGTA+GGG | 0.552075 | 4.1:+78690526 | MS.gene73248:CDS |
| GTGCCACACTTGGCACACCT+TGG | 0.553755 | 4.1:-78690773 | None:intergenic |
| ATTTATAATCAAAACATCAC+CGG | 0.555102 | 4.1:-78690193 | None:intergenic |
| AACACGAAAAGGTTACCGTT+AGG | 0.555856 | 4.1:-78689859 | None:intergenic |
| TATGTTCATCTTCTTCCTAA+CGG | 0.556701 | 4.1:+78689844 | MS.gene73248:CDS |
| AAAGTCTTGGCACAGTGCCT+GGG | 0.557778 | 4.1:-78690323 | None:intergenic |
| GATGGTTCCGTCATCATCAT+CGG | 0.561725 | 4.1:+78689712 | MS.gene73248:CDS |
| CCGAGGAATTATCCGTCGGC+GGG | 0.561765 | 4.1:+78689958 | MS.gene73248:CDS |
| GCTTGGGGTTGGCTCTGCGG+TGG | 0.561916 | 4.1:+78690659 | MS.gene73248:CDS |
| CACTCGGTGGGGCCATACAT+CGG | 0.564008 | 4.1:-78690707 | None:intergenic |
| GAAACGGTATTGTATGGTGT+AGG | 0.566790 | 4.1:+78690525 | MS.gene73248:CDS |
| TGTATCCAACGTGCCACACT+TGG | 0.569532 | 4.1:-78690783 | None:intergenic |
| TCAACGATTGGTCAAGCTTG+GGG | 0.570845 | 4.1:+78690644 | MS.gene73248:CDS |
| ACGAATCAAATTCTTCCAGA+TGG | 0.571165 | 4.1:+78689694 | MS.gene73248:CDS |
| TTATCTGAATCCAAATACTC+AGG | 0.573512 | 4.1:-78690468 | None:intergenic |
| CTAGAAGCTCCCACGTGCCG+GGG | 0.574028 | 4.1:-78689294 | None:intergenic |
| GAATTTGTTACCGGATGGAA+GGG | 0.575020 | 4.1:+78690359 | MS.gene73248:CDS |
| GCTAGTAAAACCCTTCCATC+CGG | 0.577472 | 4.1:-78690369 | None:intergenic |
| TTTGGGAGGAGTTTACGGGT+TGG | 0.577906 | 4.1:-78689400 | None:intergenic |
| ACAAACAACAACCACCGCAT+CGG | 0.579944 | 4.1:-78690016 | None:intergenic |
| GCCGTCGAATGATAAAGTCT+TGG | 0.580309 | 4.1:-78690336 | None:intergenic |
| TAAAACGATAAAACACATGT+GGG | 0.581204 | 4.1:-78690401 | None:intergenic |
| GATGTATGGCCCCACCGAGT+GGG | 0.582898 | 4.1:+78690709 | MS.gene73248:CDS |
| GATATTCGAAGTGCCTGAAA+CGG | 0.583385 | 4.1:+78690509 | MS.gene73248:CDS |
| GTGCCTGAAACGGTATTGTA+TGG | 0.585358 | 4.1:+78690519 | MS.gene73248:CDS |
| TTAAAACGATAAAACACATG+TGG | 0.585965 | 4.1:-78690402 | None:intergenic |
| ACGGCGAATTTGTTACCGGA+TGG | 0.587006 | 4.1:+78690354 | MS.gene73248:CDS |
| GGCGGTGCAACCATCCCACT+CGG | 0.587429 | 4.1:-78690723 | None:intergenic |
| TGCAACCATCCCACTCGGTG+GGG | 0.594099 | 4.1:-78690718 | None:intergenic |
| CTCTTAGACCGAACCAACAT+CGG | 0.595788 | 4.1:+78689376 | MS.gene73248:CDS |
| GGTGCAACCATCCCACTCGG+TGG | 0.596224 | 4.1:-78690720 | None:intergenic |
| TATCCTCCATTTCCCAAACC+GGG | 0.596564 | 4.1:-78690128 | None:intergenic |
| GATATGGTAATTCTACCAAC+CGG | 0.597681 | 4.1:+78690174 | MS.gene73248:CDS |
| GCCAAGACTTTATCATTCGA+CGG | 0.597876 | 4.1:+78690335 | MS.gene73248:CDS |
| TCGATGGTGTTGGAAGGTGG+AGG | 0.600846 | 4.1:+78690682 | MS.gene73248:CDS |
| ATAATCAAAACATCACCGGT+TGG | 0.601564 | 4.1:-78690189 | None:intergenic |
| ATAATTCCCACAACTGGCAA+AGG | 0.601744 | 4.1:-78690570 | None:intergenic |
| CTCCATTTCCCAAACCGGGT+CGG | 0.602491 | 4.1:-78690124 | None:intergenic |
| CCCGCCGACGGATAATTCCT+CGG | 0.603356 | 4.1:-78689958 | None:intergenic |
| ATTAGCGACGGGATCCGACC+CGG | 0.604219 | 4.1:+78690110 | MS.gene73248:CDS |
| CATGACCCGGTTGAATCACA+CGG | 0.611488 | 4.1:-78689619 | None:intergenic |
| GAACCCGTCTAAGTCACCAC+CGG | 0.611682 | 4.1:-78689575 | None:intergenic |
| TTAGGAAGAAGATGAACATA+CGG | 0.612849 | 4.1:-78689841 | None:intergenic |
| CGGCACATGGGAGTTGTGGG+CGG | 0.614233 | 4.1:+78690085 | MS.gene73248:CDS |
| TAAAGATGTTGAGTTTGCGA+CGG | 0.616862 | 4.1:+78690422 | MS.gene73248:CDS |
| TGTGGGCGGATATTAGCGAC+GGG | 0.620984 | 4.1:+78690099 | MS.gene73248:CDS |
| TCTTCCACCGATGATGATGA+CGG | 0.621819 | 4.1:-78689719 | None:intergenic |
| TGCCACACTCCCCGGCACGT+GGG | 0.634104 | 4.1:+78689285 | MS.gene73248:CDS |
| CCGGGTAAACCCGAACCACA+CGG | 0.638410 | 4.1:-78689921 | None:intergenic |
| TATGGCCCCACCGAGTGGGA+TGG | 0.638714 | 4.1:+78690713 | MS.gene73248:CDS |
| ACCGAGGAATTATCCGTCGG+CGG | 0.639122 | 4.1:+78689957 | MS.gene73248:CDS |
| TTGTGGGCGGATATTAGCGA+CGG | 0.639903 | 4.1:+78690098 | MS.gene73248:CDS |
| TCAACCCGTGTGATTCAACC+GGG | 0.642606 | 4.1:+78689614 | MS.gene73248:CDS |
| CGATGTATGGCCCCACCGAG+TGG | 0.643067 | 4.1:+78690708 | MS.gene73248:CDS |
| GTTTACCCGGAGTTAACGGG+TGG | 0.643181 | 4.1:+78689934 | MS.gene73248:CDS |
| CGACCCGGTTTGGGAAATGG+AGG | 0.646092 | 4.1:+78690125 | MS.gene73248:CDS |
| TGTTACTGTTGTGTGCATTG+AGG | 0.648238 | 4.1:-78689335 | None:intergenic |
| ATGGTGTTTGCTGTTAACCA+AGG | 0.651581 | 4.1:+78690756 | MS.gene73248:CDS |
| CGGAGTTAACGGGTGGACCG+AGG | 0.655464 | 4.1:+78689941 | MS.gene73248:CDS |
| GCAAACACCATATAATAACC+TGG | 0.656118 | 4.1:-78690744 | None:intergenic |
| GGTTCCGTCATCATCATCGG+TGG | 0.657675 | 4.1:+78689715 | MS.gene73248:CDS |
| ATCACCGAACTACCCGCCGA+CGG | 0.658505 | 4.1:-78689970 | None:intergenic |
| AAGAGCACCATGTGTCGGTG+AGG | 0.658810 | 4.1:-78689516 | None:intergenic |
| TATAAAACGGGATTCAAACA+CGG | 0.660384 | 4.1:-78690258 | None:intergenic |
| ACCAGAAGAGCACCATGTGT+CGG | 0.660505 | 4.1:-78689521 | None:intergenic |
| TGGACCGAGGAATTATCCGT+CGG | 0.669449 | 4.1:+78689954 | MS.gene73248:CDS |
| AACGACGTCGAATTAAGCGA+AGG | 0.672371 | 4.1:+78689658 | MS.gene73248:CDS |
| GGAGCTATGAAAGGTACACA+AGG | 0.678870 | 4.1:+78690216 | MS.gene73248:CDS |
| GCGGTGGTTGTTGTTTGTGG+CGG | 0.680386 | 4.1:+78690021 | MS.gene73248:CDS |
| ACACGGATATTCCGGCACAT+GGG | 0.685239 | 4.1:+78690073 | MS.gene73248:CDS |
| ATGACCCGGTTGAATCACAC+GGG | 0.686842 | 4.1:-78689618 | None:intergenic |
| TAACCAAGGTGTGCCAAGTG+TGG | 0.694344 | 4.1:+78690770 | MS.gene73248:CDS |
| GTGTGCCAAGTGTGGCACGT+TGG | 0.703709 | 4.1:+78690778 | MS.gene73248:CDS |
| GAGCTTCTAGTCCAAAACGC+AGG | 0.706658 | 4.1:+78689307 | MS.gene73248:CDS |
| AACACCATATAATAACCTGG+CGG | 0.782194 | 4.1:-78690741 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATAATCAAAACATCAC+CGG | - | chr4.1:78690196-78690215 | None:intergenic | 20.0% |
| ! | ATTATAAATGGAGCTATGAA+AGG | + | chr4.1:78690207-78690226 | MS.gene73248:CDS | 25.0% |
| ! | ATTATCCATTTGTGTATCTT+CGG | - | chr4.1:78689815-78689834 | None:intergenic | 25.0% |
| ! | GGAATTATTGAAGTGAATTT+AGG | + | chr4.1:78690585-78690604 | MS.gene73248:CDS | 25.0% |
| ! | TAAAACGATAAAACACATGT+GGG | - | chr4.1:78690404-78690423 | None:intergenic | 25.0% |
| ! | TTAAAACGATAAAACACATG+TGG | - | chr4.1:78690405-78690424 | None:intergenic | 25.0% |
| !!! | GGTGATGTTTTGATTATAAA+TGG | + | chr4.1:78690195-78690214 | MS.gene73248:CDS | 25.0% |
| GAAAAACTATGTGTAGCAAA+AGG | - | chr4.1:78690618-78690637 | None:intergenic | 30.0% | |
| GCATATTACAAAGAGAGAAA+TGG | - | chr4.1:78689227-78689246 | None:intergenic | 30.0% | |
| TATAAAACGGGATTCAAACA+CGG | - | chr4.1:78690261-78690280 | None:intergenic | 30.0% | |
| TATGTTCATCTTCTTCCTAA+CGG | + | chr4.1:78689844-78689863 | MS.gene73248:CDS | 30.0% | |
| TTAGGAAGAAGATGAACATA+CGG | - | chr4.1:78689844-78689863 | None:intergenic | 30.0% | |
| TTATCTGAATCCAAATACTC+AGG | - | chr4.1:78690471-78690490 | None:intergenic | 30.0% | |
| AAACGGTATTGTATGGTGTA+GGG | + | chr4.1:78690526-78690545 | MS.gene73248:CDS | 35.0% | |
| AACACCATATAATAACCTGG+CGG | - | chr4.1:78690744-78690763 | None:intergenic | 35.0% | |
| ACGAATCAAATTCTTCCAGA+TGG | + | chr4.1:78689694-78689713 | MS.gene73248:CDS | 35.0% | |
| ACTTCAATAATTCCCACAAC+TGG | - | chr4.1:78690579-78690598 | None:intergenic | 35.0% | |
| AGAAACCGAAGATACACAAA+TGG | + | chr4.1:78689807-78689826 | MS.gene73248:CDS | 35.0% | |
| ATAATCAAAACATCACCGGT+TGG | - | chr4.1:78690192-78690211 | None:intergenic | 35.0% | |
| GATATGGTAATTCTACCAAC+CGG | + | chr4.1:78690174-78690193 | MS.gene73248:CDS | 35.0% | |
| GCAAACACCATATAATAACC+TGG | - | chr4.1:78690747-78690766 | None:intergenic | 35.0% | |
| GTTTGTAAAAGTGAACCGTT+TGG | - | chr4.1:78689556-78689575 | None:intergenic | 35.0% | |
| TAAAGATGTTGAGTTTGCGA+CGG | + | chr4.1:78690422-78690441 | MS.gene73248:CDS | 35.0% | |
| TCACCCATTATTCTCTCAAA+CGG | - | chr4.1:78690156-78690175 | None:intergenic | 35.0% | |
| TTCACCAGGTCGATATAAAA+CGG | - | chr4.1:78690274-78690293 | None:intergenic | 35.0% | |
| ! | AATACGGTGCTTTTCTTGAA+CGG | + | chr4.1:78690049-78690068 | MS.gene73248:CDS | 35.0% |
| ! | AATCACACGGGTTGAATATT+CGG | - | chr4.1:78689609-78689628 | None:intergenic | 35.0% |
| ! | ATGCCGTTTGAGAGAATAAT+GGG | + | chr4.1:78690150-78690169 | MS.gene73248:CDS | 35.0% |
| ! | GCTACACATAGTTTTTCACA+GGG | + | chr4.1:78690621-78690640 | MS.gene73248:CDS | 35.0% |
| ! | TATGCCGTTTGAGAGAATAA+TGG | + | chr4.1:78690149-78690168 | MS.gene73248:CDS | 35.0% |
| ! | TCTGGTTCATTTCTTCCAAA+CGG | + | chr4.1:78689538-78689557 | MS.gene73248:CDS | 35.0% |
| ! | TGCTACACATAGTTTTTCAC+AGG | + | chr4.1:78690620-78690639 | MS.gene73248:CDS | 35.0% |
| !! | AACGGTTCACTTTTACAAAC+CGG | + | chr4.1:78689556-78689575 | MS.gene73248:CDS | 35.0% |
| !! | TGAGAGAATAATGGGTGATA+TGG | + | chr4.1:78690158-78690177 | MS.gene73248:CDS | 35.0% |
| !! | TGATTTTAACGAAAACCGTG+TGG | + | chr4.1:78689906-78689925 | MS.gene73248:CDS | 35.0% |
| !!! | ACAAGGTTTTGAAATGGGTT+CGG | + | chr4.1:78690233-78690252 | MS.gene73248:CDS | 35.0% |
| !!! | AGGTACACAAGGTTTTGAAA+TGG | + | chr4.1:78690227-78690246 | MS.gene73248:CDS | 35.0% |
| !!! | GGTACACAAGGTTTTGAAAT+GGG | + | chr4.1:78690228-78690247 | MS.gene73248:CDS | 35.0% |
| AACACGAAAAGGTTACCGTT+AGG | - | chr4.1:78689862-78689881 | None:intergenic | 40.0% | |
| ACACCATACAATACCGTTTC+AGG | - | chr4.1:78690525-78690544 | None:intergenic | 40.0% | |
| ACTGAATGAGCGTAACAATC+CGG | - | chr4.1:78689454-78689473 | None:intergenic | 40.0% | |
| ATAATTCCCACAACTGGCAA+AGG | - | chr4.1:78690573-78690592 | None:intergenic | 40.0% | |
| ATATCCTCCATTTCCCAAAC+CGG | - | chr4.1:78690132-78690151 | None:intergenic | 40.0% | |
| GAAACGGTATTGTATGGTGT+AGG | + | chr4.1:78690525-78690544 | MS.gene73248:CDS | 40.0% | |
| GCCAAGACTTTATCATTCGA+CGG | + | chr4.1:78690335-78690354 | MS.gene73248:CDS | 40.0% | |
| TAAAAATCCTCACCGACACA+TGG | + | chr4.1:78689509-78689528 | MS.gene73248:CDS | 40.0% | |
| TCACCAGGTCGATATAAAAC+GGG | - | chr4.1:78690273-78690292 | None:intergenic | 40.0% | |
| TCTTCGGTTTCTTGCAGAAA+CGG | - | chr4.1:78689799-78689818 | None:intergenic | 40.0% | |
| TGTTACTGTTGTGTGCATTG+AGG | - | chr4.1:78689338-78689357 | None:intergenic | 40.0% | |
| TTAACGAAAACCGTGTGGTT+CGG | + | chr4.1:78689911-78689930 | MS.gene73248:CDS | 40.0% | |
| TTTATATCGACCTGGTGAAC+CGG | + | chr4.1:78690275-78690294 | MS.gene73248:CDS | 40.0% | |
| ! | AATCCCGTTTTATATCGACC+TGG | + | chr4.1:78690267-78690286 | MS.gene73248:CDS | 40.0% |
| ! | AGAAGGTGAATTTTCCGATG+CGG | + | chr4.1:78690002-78690021 | MS.gene73248:CDS | 40.0% |
| ! | GATATTCGAAGTGCCTGAAA+CGG | + | chr4.1:78690509-78690528 | MS.gene73248:CDS | 40.0% |
| ! | TGCTTTTCTTGAACGGAACA+CGG | + | chr4.1:78690056-78690075 | MS.gene73248:CDS | 40.0% |
| ! | TTTTACCCGAAACGCGAAAA+CGG | + | chr4.1:78689760-78689779 | MS.gene73248:CDS | 40.0% |
| ! | TTTTTCACAGGGTCAACGAT+TGG | + | chr4.1:78690632-78690651 | MS.gene73248:CDS | 40.0% |
| !! | ATGGTGTTTGCTGTTAACCA+AGG | + | chr4.1:78690756-78690775 | MS.gene73248:CDS | 40.0% |
| !! | GAATTTGTTACCGGATGGAA+GGG | + | chr4.1:78690359-78690378 | MS.gene73248:CDS | 40.0% |
| !! | GTGTCGGTGAGGATTTTTAA+GGG | - | chr4.1:78689508-78689527 | None:intergenic | 40.0% |
| !! | TGTCGGTGAGGATTTTTAAG+GGG | - | chr4.1:78689507-78689526 | None:intergenic | 40.0% |
| !! | TGTGTCGGTGAGGATTTTTA+AGG | - | chr4.1:78689509-78689528 | None:intergenic | 40.0% |
| !!! | GGTTTTTTGGGAGGAGTTTA+CGG | - | chr4.1:78689408-78689427 | None:intergenic | 40.0% |
| !!! | GTTTTTTGGGAGGAGTTTAC+GGG | - | chr4.1:78689407-78689426 | None:intergenic | 40.0% |
| !!! | TGAACCGGCAATGGTTTTTT+GGG | - | chr4.1:78689420-78689439 | None:intergenic | 40.0% |
| AACGACGTCGAATTAAGCGA+AGG | + | chr4.1:78689658-78689677 | MS.gene73248:CDS | 45.0% | |
| ACAAACAACAACCACCGCAT+CGG | - | chr4.1:78690019-78690038 | None:intergenic | 45.0% | |
| ATGAGCGTAACAATCCGGTT+TGG | - | chr4.1:78689449-78689468 | None:intergenic | 45.0% | |
| CCGGTTCACTAAAACCAAAC+CGG | + | chr4.1:78689432-78689451 | MS.gene73248:CDS | 45.0% | |
| CGTGTTCGCAAACACGAAAT+CGG | + | chr4.1:78689876-78689895 | MS.gene73248:CDS | 45.0% | |
| CTCTTAGACCGAACCAACAT+CGG | + | chr4.1:78689376-78689395 | MS.gene73248:CDS | 45.0% | |
| GATGGTTCCGTCATCATCAT+CGG | + | chr4.1:78689712-78689731 | MS.gene73248:CDS | 45.0% | |
| GCCGTCGAATGATAAAGTCT+TGG | - | chr4.1:78690339-78690358 | None:intergenic | 45.0% | |
| GCTAGTAAAACCCTTCCATC+CGG | - | chr4.1:78690372-78690391 | None:intergenic | 45.0% | |
| GTGCCTGAAACGGTATTGTA+TGG | + | chr4.1:78690519-78690538 | MS.gene73248:CDS | 45.0% | |
| TAACGAAAACCGTGTGGTTC+GGG | + | chr4.1:78689912-78689931 | MS.gene73248:CDS | 45.0% | |
| TATCCTCCATTTCCCAAACC+GGG | - | chr4.1:78690131-78690150 | None:intergenic | 45.0% | |
| TCAGGCACTTCGAATATCTC+AGG | - | chr4.1:78690507-78690526 | None:intergenic | 45.0% | |
| TCCTCCCAAAAAACCATTGC+CGG | + | chr4.1:78689413-78689432 | MS.gene73248:CDS | 45.0% | |
| TCGAATTAAGCGAAGGTCGT+TGG | + | chr4.1:78689665-78689684 | MS.gene73248:CDS | 45.0% | |
| TCGTGTTTGCGAACACGAAA+AGG | - | chr4.1:78689873-78689892 | None:intergenic | 45.0% | |
| TGAACGGAACACGGATATTC+CGG | + | chr4.1:78690065-78690084 | MS.gene73248:CDS | 45.0% | |
| TGCACCGCCAGGTTATTATA+TGG | + | chr4.1:78690737-78690756 | MS.gene73248:CDS | 45.0% | |
| TTCAACCCGTGTGATTCAAC+CGG | + | chr4.1:78689613-78689632 | MS.gene73248:CDS | 45.0% | |
| ! | AGCGTTTTCGCCTGAGTATT+TGG | + | chr4.1:78690458-78690477 | MS.gene73248:CDS | 45.0% |
| ! | GATGGAAGGGTTTTACTAGC+GGG | + | chr4.1:78690372-78690391 | MS.gene73248:CDS | 45.0% |
| ! | GGAGCTATGAAAGGTACACA+AGG | + | chr4.1:78690216-78690235 | MS.gene73248:CDS | 45.0% |
| ! | GGATGGAAGGGTTTTACTAG+CGG | + | chr4.1:78690371-78690390 | MS.gene73248:CDS | 45.0% |
| ! | GTCAACGATTGGTCAAGCTT+GGG | + | chr4.1:78690643-78690662 | MS.gene73248:CDS | 45.0% |
| ! | TCAACGATTGGTCAAGCTTG+GGG | + | chr4.1:78690644-78690663 | MS.gene73248:CDS | 45.0% |
| ! | TCTTCCACCGATGATGATGA+CGG | - | chr4.1:78689722-78689741 | None:intergenic | 45.0% |
| !! | ATGATGATGACGGAACCATC+TGG | - | chr4.1:78689712-78689731 | None:intergenic | 45.0% |
| !! | CGAATTTGTTACCGGATGGA+AGG | + | chr4.1:78690358-78690377 | MS.gene73248:CDS | 45.0% |
| !! | GGTTCACTTTTACAAACCGG+TGG | + | chr4.1:78689559-78689578 | MS.gene73248:CDS | 45.0% |
| !! | TTCGACGGCGAATTTGTTAC+CGG | + | chr4.1:78690350-78690369 | MS.gene73248:CDS | 45.0% |
| !!! | CCGGTTTGGTTTTAGTGAAC+CGG | - | chr4.1:78689435-78689454 | None:intergenic | 45.0% |
| !!! | GGCGGAGTTGGTTTTTTATG+GGG | - | chr4.1:78689486-78689505 | None:intergenic | 45.0% |
| !!! | GGGCGGAGTTGGTTTTTTAT+GGG | - | chr4.1:78689487-78689506 | None:intergenic | 45.0% |
| !!! | GGTTTTTTATGGGGTCGAAG+AGG | - | chr4.1:78689477-78689496 | None:intergenic | 45.0% |
| !!! | GTGAACCGGCAATGGTTTTT+TGG | - | chr4.1:78689421-78689440 | None:intergenic | 45.0% |
| !!! | TGGTTTTAGTGAACCGGCAA+TGG | - | chr4.1:78689429-78689448 | None:intergenic | 45.0% |
| AAACCGGTGGTGACTTAGAC+GGG | + | chr4.1:78689572-78689591 | MS.gene73248:CDS | 50.0% | |
| AAAGTCTTGGCACAGTGCCT+GGG | - | chr4.1:78690326-78690345 | None:intergenic | 50.0% | |
| AACACGGATATTCCGGCACA+TGG | + | chr4.1:78690072-78690091 | MS.gene73248:CDS | 50.0% | |
| AAGGTGGAGGATCCGATGTA+TGG | + | chr4.1:78690695-78690714 | MS.gene73248:CDS | 50.0% | |
| ACACGGATATTCCGGCACAT+GGG | + | chr4.1:78690073-78690092 | MS.gene73248:CDS | 50.0% | |
| ACCATGAACCGTAACCCAAC+CGG | - | chr4.1:78690297-78690316 | None:intergenic | 50.0% | |
| AGTGTGCCTTTGCCAGTTGT+GGG | + | chr4.1:78690564-78690583 | MS.gene73248:CDS | 50.0% | |
| ATGACCCGGTTGAATCACAC+GGG | - | chr4.1:78689621-78689640 | None:intergenic | 50.0% | |
| ATTCAACCGGGTCATGCGAT+TGG | + | chr4.1:78689626-78689645 | MS.gene73248:CDS | 50.0% | |
| CAAACCGGTGGTGACTTAGA+CGG | + | chr4.1:78689571-78689590 | MS.gene73248:CDS | 50.0% | |
| CATGACCCGGTTGAATCACA+CGG | - | chr4.1:78689622-78689641 | None:intergenic | 50.0% | |
| GAGCTTCTAGTCCAAAACGC+AGG | + | chr4.1:78689307-78689326 | MS.gene73248:CDS | 50.0% | |
| GTCATCATCATCGGTGGAAG+AGG | + | chr4.1:78689721-78689740 | MS.gene73248:CDS | 50.0% | |
| GTTTGTGGCGGTGCTCAATA+CGG | + | chr4.1:78690033-78690052 | MS.gene73248:CDS | 50.0% | |
| TAAAGTCTTGGCACAGTGCC+TGG | - | chr4.1:78690327-78690346 | None:intergenic | 50.0% | |
| TAACCAAGGTGTGCCAAGTG+TGG | + | chr4.1:78690770-78690789 | MS.gene73248:CDS | 50.0% | |
| TCAACCCGTGTGATTCAACC+GGG | + | chr4.1:78689614-78689633 | MS.gene73248:CDS | 50.0% | |
| TCGGGTTTACCCGGAGTTAA+CGG | + | chr4.1:78689930-78689949 | MS.gene73248:CDS | 50.0% | |
| TGGACCGAGGAATTATCCGT+CGG | + | chr4.1:78689954-78689973 | MS.gene73248:CDS | 50.0% | |
| TGTATCCAACGTGCCACACT+TGG | - | chr4.1:78690786-78690805 | None:intergenic | 50.0% | |
| TTCAACCGGGTCATGCGATT+GGG | + | chr4.1:78689627-78689646 | MS.gene73248:CDS | 50.0% | |
| TTGTGGGCGGATATTAGCGA+CGG | + | chr4.1:78690098-78690117 | MS.gene73248:CDS | 50.0% | |
| TTTGGGAGGAGTTTACGGGT+TGG | - | chr4.1:78689403-78689422 | None:intergenic | 50.0% | |
| ! | ACGACACCGTTTTCGCGTTT+CGG | - | chr4.1:78689769-78689788 | None:intergenic | 50.0% |
| ! | AGGTGAATTTTCCGATGCGG+TGG | + | chr4.1:78690005-78690024 | MS.gene73248:CDS | 50.0% |
| ! | GGTCAACGATTGGTCAAGCT+TGG | + | chr4.1:78690642-78690661 | MS.gene73248:CDS | 50.0% |
| ! | TTGAGGCTATGCCTGCGTTT+TGG | - | chr4.1:78689321-78689340 | None:intergenic | 50.0% |
| !! | ACCAGAAGAGCACCATGTGT+CGG | - | chr4.1:78689524-78689543 | None:intergenic | 50.0% |
| !! | ACGGCGAATTTGTTACCGGA+TGG | + | chr4.1:78690354-78690373 | MS.gene73248:CDS | 50.0% |
| !! | CGATGTTGGTTCGGTCTAAG+AGG | - | chr4.1:78689378-78689397 | None:intergenic | 50.0% |
| !! | CGGTGAGGATTTTTAAGGGG+CGG | - | chr4.1:78689504-78689523 | None:intergenic | 50.0% |
| !! | GATGCGGTGGTTGTTGTTTG+TGG | + | chr4.1:78690018-78690037 | MS.gene73248:CDS | 50.0% |
| !! | GGATTTTTAAGGGGCGGAGT+TGG | - | chr4.1:78689498-78689517 | None:intergenic | 50.0% |
| !! | TCGGTGATGCTGGCTTTAGA+AGG | + | chr4.1:78689985-78690004 | MS.gene73248:CDS | 50.0% |
| !! | TTTACGGGTTGGACCGATGT+TGG | - | chr4.1:78689392-78689411 | None:intergenic | 50.0% |
| !!! | ACCGGCAATGGTTTTTTGGG+AGG | - | chr4.1:78689417-78689436 | None:intergenic | 50.0% |
| !!! | AGTGTGGCACGTGCTGATTT+TGG | - | chr4.1:78689274-78689293 | None:intergenic | 50.0% |
| !!! | CGGTTCATGGTTTTGAACCC+AGG | + | chr4.1:78690306-78690325 | MS.gene73248:CDS | 50.0% |
| !!! | GGGGCGGAGTTGGTTTTTTA+TGG | - | chr4.1:78689488-78689507 | None:intergenic | 50.0% |
| !!! | GTGTGGCACGTGCTGATTTT+GGG | - | chr4.1:78689273-78689292 | None:intergenic | 50.0% |
| ACCGACACATGGTGCTCTTC+TGG | + | chr4.1:78689520-78689539 | MS.gene73248:CDS | 55.0% | |
| ACCGAGGAATTATCCGTCGG+CGG | + | chr4.1:78689957-78689976 | MS.gene73248:CDS | 55.0% | |
| ACCGGTTGGGTTACGGTTCA+TGG | + | chr4.1:78690293-78690312 | MS.gene73248:CDS | 55.0% | |
| ATCGACCTGGTGAACCGGTT+GGG | + | chr4.1:78690280-78690299 | MS.gene73248:CDS | 55.0% | |
| ATTCCGGCACATGGGAGTTG+TGG | + | chr4.1:78690081-78690100 | MS.gene73248:CDS | 55.0% | |
| CGGGTTTACCCGGAGTTAAC+GGG | + | chr4.1:78689931-78689950 | MS.gene73248:CDS | 55.0% | |
| CTCCATTTCCCAAACCGGGT+CGG | - | chr4.1:78690127-78690146 | None:intergenic | 55.0% | |
| CTCTTCCCAATCGCATGACC+CGG | - | chr4.1:78689635-78689654 | None:intergenic | 55.0% | |
| CTGGTGAACCGGTTGGGTTA+CGG | + | chr4.1:78690286-78690305 | MS.gene73248:CDS | 55.0% | |
| GAACCCGTCTAAGTCACCAC+CGG | - | chr4.1:78689578-78689597 | None:intergenic | 55.0% | |
| GAGTGTGCCTTTGCCAGTTG+TGG | + | chr4.1:78690563-78690582 | MS.gene73248:CDS | 55.0% | |
| GGTTCCGTCATCATCATCGG+TGG | + | chr4.1:78689715-78689734 | MS.gene73248:CDS | 55.0% | |
| GTTTACCCGGAGTTAACGGG+TGG | + | chr4.1:78689934-78689953 | MS.gene73248:CDS | 55.0% | |
| TATCGACCTGGTGAACCGGT+TGG | + | chr4.1:78690279-78690298 | MS.gene73248:CDS | 55.0% | |
| TGTGGGCGGATATTAGCGAC+GGG | + | chr4.1:78690099-78690118 | MS.gene73248:CDS | 55.0% | |
| TTATCCGTCGGCGGGTAGTT+CGG | + | chr4.1:78689966-78689985 | MS.gene73248:CDS | 55.0% | |
| TTCCGGCACATGGGAGTTGT+GGG | + | chr4.1:78690082-78690101 | MS.gene73248:CDS | 55.0% | |
| ! | CGACACCGTTTTCGCGTTTC+GGG | - | chr4.1:78689768-78689787 | None:intergenic | 55.0% |
| ! | CGATTGGTCAAGCTTGGGGT+TGG | + | chr4.1:78690648-78690667 | MS.gene73248:CDS | 55.0% |
| ! | GGGTTGGACCGATGTTGGTT+CGG | - | chr4.1:78689387-78689406 | None:intergenic | 55.0% |
| ! | TCGATGGTGTTGGAAGGTGG+AGG | + | chr4.1:78690682-78690701 | MS.gene73248:CDS | 55.0% |
| ! | TGGTCGATGGTGTTGGAAGG+TGG | + | chr4.1:78690679-78690698 | MS.gene73248:CDS | 55.0% |
| !! | AAGAGCACCATGTGTCGGTG+AGG | - | chr4.1:78689519-78689538 | None:intergenic | 55.0% |
| !! | ATCCGACCCGGTTTGGGAAA+TGG | + | chr4.1:78690122-78690141 | MS.gene73248:CDS | 55.0% |
| !! | GCGGTGGTTGTTGTTTGTGG+CGG | + | chr4.1:78690021-78690040 | MS.gene73248:CDS | 55.0% |
| ACTAGAAGCTCCCACGTGCC+GGG | - | chr4.1:78689298-78689317 | None:intergenic | 60.0% | |
| ATCACCGAACTACCCGCCGA+CGG | - | chr4.1:78689973-78689992 | None:intergenic | 60.0% | |
| ATTAGCGACGGGATCCGACC+CGG | + | chr4.1:78690110-78690129 | MS.gene73248:CDS | 60.0% | |
| CCCGCCGACGGATAATTCCT+CGG | - | chr4.1:78689961-78689980 | None:intergenic | 60.0% | |
| CCGAGGAATTATCCGTCGGC+GGG | + | chr4.1:78689958-78689977 | MS.gene73248:CDS | 60.0% | |
| CCGGGTAAACCCGAACCACA+CGG | - | chr4.1:78689924-78689943 | None:intergenic | 60.0% | |
| CTCGGTCCACCCGTTAACTC+CGG | - | chr4.1:78689943-78689962 | None:intergenic | 60.0% | |
| GACTAGAAGCTCCCACGTGC+CGG | - | chr4.1:78689299-78689318 | None:intergenic | 60.0% | |
| GATGTATGGCCCCACCGAGT+GGG | + | chr4.1:78690709-78690728 | MS.gene73248:CDS | 60.0% | |
| GTGCAACCATCCCACTCGGT+GGG | - | chr4.1:78690722-78690741 | None:intergenic | 60.0% | |
| GTGCCACACTTGGCACACCT+TGG | - | chr4.1:78690776-78690795 | None:intergenic | 60.0% | |
| GTGTGCCAAGTGTGGCACGT+TGG | + | chr4.1:78690778-78690797 | MS.gene73248:CDS | 60.0% | |
| TCGGTCCACCCGTTAACTCC+GGG | - | chr4.1:78689942-78689961 | None:intergenic | 60.0% | |
| TCTGCGGTGGTCGATGGTGT+TGG | + | chr4.1:78690672-78690691 | MS.gene73248:CDS | 60.0% | |
| ! | CACTCGGTGGGGCCATACAT+CGG | - | chr4.1:78690710-78690729 | None:intergenic | 60.0% |
| ! | CCGTGTGGTTCGGGTTTACC+CGG | + | chr4.1:78689921-78689940 | MS.gene73248:CDS | 60.0% |
| ! | CGGTGGTCGATGGTGTTGGA+AGG | + | chr4.1:78690676-78690695 | MS.gene73248:CDS | 60.0% |
| ! | CGTAACCCAACCGGTTCACC+AGG | - | chr4.1:78690288-78690307 | None:intergenic | 60.0% |
| ! | TGCAACCATCCCACTCGGTG+GGG | - | chr4.1:78690721-78690740 | None:intergenic | 60.0% |
| !! | CAAGCTTGGGGTTGGCTCTG+CGG | + | chr4.1:78690656-78690675 | MS.gene73248:CDS | 60.0% |
| !! | CGACCCGGTTTGGGAAATGG+AGG | + | chr4.1:78690125-78690144 | MS.gene73248:CDS | 60.0% |
| AGTGGGATGGTTGCACCGCC+AGG | + | chr4.1:78690726-78690745 | MS.gene73248:CDS | 65.0% | |
| CGATGTATGGCCCCACCGAG+TGG | + | chr4.1:78690708-78690727 | MS.gene73248:CDS | 65.0% | |
| CGCCCACAACTCCCATGTGC+CGG | - | chr4.1:78690087-78690106 | None:intergenic | 65.0% | |
| CGGCACATGGGAGTTGTGGG+CGG | + | chr4.1:78690085-78690104 | MS.gene73248:CDS | 65.0% | |
| CTAGAAGCTCCCACGTGCCG+GGG | - | chr4.1:78689297-78689316 | None:intergenic | 65.0% | |
| GACGGGATCCGACCCGGTTT+GGG | + | chr4.1:78690116-78690135 | MS.gene73248:CDS | 65.0% | |
| GGCGGTGCAACCATCCCACT+CGG | - | chr4.1:78690726-78690745 | None:intergenic | 65.0% | |
| GGTGCAACCATCCCACTCGG+TGG | - | chr4.1:78690723-78690742 | None:intergenic | 65.0% | |
| TATGGCCCCACCGAGTGGGA+TGG | + | chr4.1:78690713-78690732 | MS.gene73248:CDS | 65.0% | |
| TCAGCACGTGCCACACTCCC+CGG | + | chr4.1:78689277-78689296 | MS.gene73248:CDS | 65.0% | |
| ! | CGGAGTTAACGGGTGGACCG+AGG | + | chr4.1:78689941-78689960 | MS.gene73248:CDS | 65.0% |
| ! | GGCGGGTAGTTCGGTGATGC+TGG | + | chr4.1:78689975-78689994 | MS.gene73248:CDS | 65.0% |
| !! | GTTGGCTCTGCGGTGGTCGA+TGG | + | chr4.1:78690666-78690685 | MS.gene73248:CDS | 65.0% |
| CGACGGGATCCGACCCGGTT+TGG | + | chr4.1:78690115-78690134 | MS.gene73248:CDS | 70.0% | |
| TGCCACACTCCCCGGCACGT+GGG | + | chr4.1:78689285-78689304 | MS.gene73248:CDS | 70.0% | |
| !! | GCTTGGGGTTGGCTCTGCGG+TGG | + | chr4.1:78690659-78690678 | MS.gene73248:CDS | 70.0% |
| CTCCCACGTGCCGGGGAGTG+TGG | - | chr4.1:78689290-78689309 | None:intergenic | 75.0% | |
| GTGCCACACTCCCCGGCACG+TGG | + | chr4.1:78689284-78689303 | MS.gene73248:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 78689217 | 78690815 | 78689217 | ID=MS.gene73248 |
| chr4.1 | mRNA | 78689217 | 78690815 | 78689217 | ID=MS.gene73248.t1;Parent=MS.gene73248 |
| chr4.1 | exon | 78689217 | 78690815 | 78689217 | ID=MS.gene73248.t1.exon1;Parent=MS.gene73248.t1 |
| chr4.1 | CDS | 78689217 | 78690815 | 78689217 | ID=cds.MS.gene73248.t1;Parent=MS.gene73248.t1 |
| Gene Sequence |
| Protein sequence |
