Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065314.t1 | CAB46083.1 | 98.6 | 484 | 7 | 0 | 1 | 484 | 1 | 484 | 5.10E-264 | 919.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065314.t1 | Q9C968 | 51.3 | 470 | 199 | 7 | 16 | 484 | 19 | 459 | 4.9e-114 | 412.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065314.t1 | Q9XGI0 | 98.6 | 484 | 7 | 0 | 1 | 484 | 1 | 484 | 3.7e-264 | 919.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene065314 | 0.810445 | 1.15E-50 | -1.69E-46 |
| MS.gene054850 | MS.gene065314 | 0.844753 | 6.22E-59 | -1.69E-46 |
| MS.gene054941 | MS.gene065314 | 0.801606 | 8.32E-49 | -1.69E-46 |
| MS.gene05652 | MS.gene065314 | 0.820151 | 7.98E-53 | -1.69E-46 |
| MS.gene058128 | MS.gene065314 | 0.818602 | 1.80E-52 | -1.69E-46 |
| MS.gene059616 | MS.gene065314 | 0.826664 | 2.40E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene065314 | -0.832355 | 9.91E-56 | -1.69E-46 |
| MS.gene061089 | MS.gene065314 | 0.817637 | 2.97E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene065314 | MS.gene072956 | PPI |
| MS.gene038078 | MS.gene065314 | PPI |
| MS.gene065314 | MS.gene23970 | PPI |
| MS.gene065314 | MS.gene71482 | PPI |
| MS.gene065314 | MS.gene015942 | PPI |
| MS.gene065314 | MS.gene89575 | PPI |
| MS.gene065314 | MS.gene067144 | PPI |
| MS.gene065314 | MS.gene036055 | PPI |
| MS.gene065314 | MS.gene072954 | PPI |
| MS.gene065314 | MS.gene021632 | PPI |
| MS.gene065314 | MS.gene014786 | PPI |
| MS.gene065314 | MS.gene072963 | PPI |
| MS.gene065314 | MS.gene067143 | PPI |
| MS.gene065314 | MS.gene072952 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065314.t1 | MTR_2g102520 | 92.784 | 485 | 28 | 2 | 1 | 484 | 1 | 479 | 0.0 | 924 |
| MS.gene065314.t1 | MTR_2g102550 | 66.667 | 483 | 102 | 6 | 3 | 484 | 5 | 429 | 0.0 | 603 |
| MS.gene065314.t1 | MTR_3g107970 | 47.454 | 491 | 217 | 12 | 8 | 484 | 11 | 474 | 2.03e-128 | 382 |
| MS.gene065314.t1 | MTR_1g011470 | 59.247 | 292 | 117 | 2 | 193 | 484 | 133 | 422 | 2.62e-114 | 343 |
| MS.gene065314.t1 | MTR_3g088415 | 52.098 | 286 | 131 | 3 | 191 | 472 | 207 | 490 | 2.76e-97 | 302 |
| MS.gene065314.t1 | MTR_1g018680 | 51.119 | 268 | 128 | 2 | 212 | 477 | 82 | 348 | 3.38e-90 | 280 |
| MS.gene065314.t1 | MTR_3g088405 | 46.237 | 279 | 149 | 1 | 200 | 477 | 222 | 500 | 1.43e-86 | 275 |
| MS.gene065314.t1 | MTR_3g088415 | 52.991 | 234 | 107 | 1 | 191 | 421 | 207 | 440 | 5.99e-85 | 268 |
| MS.gene065314.t1 | MTR_3g102520 | 44.561 | 285 | 154 | 3 | 203 | 484 | 73 | 356 | 1.42e-74 | 239 |
| MS.gene065314.t1 | MTR_3g102530 | 44.912 | 285 | 153 | 3 | 203 | 484 | 66 | 349 | 3.31e-74 | 238 |
| MS.gene065314.t1 | MTR_3g102510 | 45.255 | 274 | 148 | 2 | 212 | 484 | 65 | 337 | 3.31e-72 | 232 |
| MS.gene065314.t1 | MTR_3g102560 | 48.249 | 257 | 125 | 4 | 226 | 480 | 69 | 319 | 1.93e-66 | 217 |
| MS.gene065314.t1 | MTR_3g088415 | 55.249 | 181 | 78 | 1 | 191 | 368 | 207 | 387 | 5.54e-66 | 218 |
| MS.gene065314.t1 | MTR_3g102540 | 48.047 | 256 | 122 | 5 | 225 | 477 | 13 | 260 | 2.25e-65 | 212 |
| MS.gene065314.t1 | MTR_5g023790 | 38.351 | 279 | 162 | 6 | 195 | 472 | 146 | 415 | 1.08e-52 | 184 |
| MS.gene065314.t1 | MTR_5g088980 | 38.909 | 275 | 157 | 8 | 205 | 477 | 148 | 413 | 1.27e-52 | 183 |
| MS.gene065314.t1 | MTR_5g023790 | 41.152 | 243 | 134 | 5 | 195 | 436 | 146 | 380 | 4.90e-52 | 181 |
| MS.gene065314.t1 | MTR_8g074000 | 36.803 | 269 | 161 | 5 | 205 | 472 | 159 | 419 | 3.12e-48 | 172 |
| MS.gene065314.t1 | MTR_7g089080 | 36.000 | 300 | 171 | 8 | 200 | 483 | 177 | 471 | 7.22e-48 | 178 |
| MS.gene065314.t1 | MTR_5g023790 | 43.258 | 178 | 98 | 3 | 195 | 371 | 146 | 321 | 1.57e-40 | 149 |
| MS.gene065314.t1 | MTR_3g060770 | 30.568 | 229 | 143 | 7 | 254 | 472 | 60 | 282 | 1.96e-23 | 100 |
| MS.gene065314.t1 | MTR_3g060410 | 32.292 | 192 | 121 | 5 | 250 | 436 | 131 | 318 | 3.73e-22 | 98.2 |
| MS.gene065314.t1 | MTR_3g061680 | 31.004 | 229 | 141 | 9 | 254 | 472 | 50 | 271 | 8.21e-21 | 92.8 |
| MS.gene065314.t1 | MTR_3g060400 | 28.755 | 233 | 149 | 8 | 250 | 472 | 52 | 277 | 2.84e-20 | 91.3 |
| MS.gene065314.t1 | MTR_3g460990 | 28.755 | 233 | 149 | 8 | 250 | 472 | 52 | 277 | 2.84e-20 | 91.3 |
| MS.gene065314.t1 | MTR_3g060820 | 29.258 | 229 | 145 | 8 | 254 | 472 | 50 | 271 | 2.93e-20 | 90.9 |
| MS.gene065314.t1 | MTR_1g032850 | 35.870 | 184 | 101 | 6 | 241 | 419 | 364 | 535 | 1.55e-17 | 85.9 |
| MS.gene065314.t1 | MTR_5g044040 | 37.333 | 75 | 47 | 0 | 276 | 350 | 7 | 81 | 1.40e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065314.t1 | AT1G80370 | 51.064 | 470 | 200 | 7 | 16 | 484 | 19 | 459 | 1.95e-151 | 440 |
| MS.gene065314.t1 | AT1G15570 | 50.719 | 487 | 191 | 14 | 8 | 484 | 3 | 450 | 1.20e-147 | 430 |
| MS.gene065314.t1 | AT5G11300 | 45.551 | 472 | 191 | 10 | 15 | 484 | 27 | 434 | 3.51e-128 | 379 |
| MS.gene065314.t1 | AT5G25380 | 62.369 | 287 | 107 | 1 | 198 | 484 | 150 | 435 | 2.36e-125 | 372 |
| MS.gene065314.t1 | AT5G25380 | 62.369 | 287 | 107 | 1 | 198 | 484 | 150 | 435 | 2.36e-125 | 372 |
| MS.gene065314.t1 | AT5G25380 | 62.369 | 287 | 107 | 1 | 198 | 484 | 156 | 441 | 3.30e-125 | 372 |
| MS.gene065314.t1 | AT5G25380 | 63.100 | 271 | 99 | 1 | 198 | 468 | 150 | 419 | 3.46e-120 | 358 |
| MS.gene065314.t1 | AT5G11300 | 44.499 | 409 | 162 | 9 | 15 | 421 | 27 | 372 | 4.80e-103 | 314 |
| MS.gene065314.t1 | AT1G44110 | 50.714 | 280 | 137 | 1 | 205 | 484 | 178 | 456 | 1.92e-96 | 299 |
| MS.gene065314.t1 | AT5G43080 | 49.643 | 280 | 139 | 2 | 206 | 484 | 72 | 350 | 9.43e-95 | 291 |
| MS.gene065314.t1 | AT1G47210 | 49.291 | 282 | 139 | 3 | 206 | 484 | 87 | 367 | 1.15e-94 | 291 |
| MS.gene065314.t1 | AT5G43080 | 50.000 | 280 | 133 | 3 | 206 | 484 | 72 | 345 | 5.70e-93 | 286 |
| MS.gene065314.t1 | AT1G77390 | 52.453 | 265 | 123 | 2 | 204 | 467 | 161 | 423 | 1.46e-92 | 288 |
| MS.gene065314.t1 | AT1G47230 | 48.905 | 274 | 136 | 3 | 214 | 484 | 88 | 360 | 2.21e-90 | 280 |
| MS.gene065314.t1 | AT1G47230 | 48.043 | 281 | 141 | 4 | 208 | 484 | 82 | 361 | 1.41e-88 | 276 |
| MS.gene065314.t1 | AT1G47220 | 47.232 | 271 | 140 | 2 | 206 | 474 | 41 | 310 | 8.57e-84 | 262 |
| MS.gene065314.t1 | AT5G06150 | 35.842 | 279 | 169 | 5 | 203 | 480 | 163 | 432 | 1.01e-48 | 174 |
| MS.gene065314.t1 | AT1G20610 | 36.364 | 286 | 169 | 9 | 195 | 477 | 149 | 424 | 1.88e-47 | 170 |
| MS.gene065314.t1 | AT4G37490 | 36.620 | 284 | 166 | 8 | 205 | 482 | 148 | 423 | 8.09e-46 | 165 |
| MS.gene065314.t1 | AT1G76310 | 34.965 | 286 | 176 | 6 | 197 | 480 | 152 | 429 | 8.77e-46 | 165 |
| MS.gene065314.t1 | AT3G11520 | 34.915 | 295 | 180 | 5 | 189 | 480 | 124 | 409 | 2.63e-45 | 164 |
| MS.gene065314.t1 | AT1G76310 | 38.397 | 237 | 137 | 5 | 197 | 431 | 152 | 381 | 3.36e-44 | 160 |
| MS.gene065314.t1 | AT3G11520 | 36.822 | 258 | 152 | 4 | 189 | 443 | 124 | 373 | 3.84e-44 | 160 |
| MS.gene065314.t1 | AT2G17620 | 37.847 | 288 | 168 | 6 | 195 | 480 | 144 | 422 | 1.00e-43 | 160 |
| MS.gene065314.t1 | AT2G26760 | 37.226 | 274 | 162 | 7 | 205 | 476 | 113 | 378 | 2.52e-43 | 157 |
| MS.gene065314.t1 | AT4G35620 | 37.546 | 269 | 159 | 5 | 205 | 472 | 155 | 415 | 4.81e-42 | 155 |
| MS.gene065314.t1 | AT1G76310 | 31.847 | 314 | 176 | 7 | 197 | 480 | 152 | 457 | 5.34e-40 | 150 |
| MS.gene065314.t1 | AT4G35620 | 39.914 | 233 | 132 | 4 | 205 | 436 | 155 | 380 | 1.87e-39 | 147 |
| MS.gene065314.t1 | AT1G16330 | 33.948 | 271 | 164 | 6 | 171 | 437 | 345 | 604 | 9.74e-39 | 149 |
| MS.gene065314.t1 | AT1G47210 | 53.774 | 106 | 47 | 1 | 206 | 309 | 87 | 192 | 8.69e-35 | 129 |
| MS.gene065314.t1 | AT1G76310 | 40.113 | 177 | 103 | 3 | 197 | 371 | 152 | 327 | 5.09e-34 | 131 |
| MS.gene065314.t1 | AT5G06150 | 36.257 | 171 | 106 | 2 | 199 | 368 | 159 | 327 | 1.26e-32 | 127 |
| MS.gene065314.t1 | AT1G20590 | 37.107 | 159 | 94 | 2 | 280 | 438 | 63 | 215 | 1.27e-27 | 111 |
| MS.gene065314.t1 | AT1G14750 | 40.000 | 165 | 89 | 5 | 250 | 410 | 214 | 372 | 1.75e-19 | 90.9 |
| MS.gene065314.t1 | AT1G14750 | 40.000 | 165 | 89 | 5 | 250 | 410 | 382 | 540 | 2.26e-19 | 91.7 |
| MS.gene065314.t1 | AT1G14750 | 40.000 | 165 | 89 | 5 | 250 | 410 | 382 | 540 | 3.18e-19 | 91.3 |
| MS.gene065314.t1 | AT1G14750 | 40.000 | 165 | 88 | 6 | 250 | 410 | 214 | 371 | 2.36e-18 | 87.4 |
| MS.gene065314.t1 | AT1G34460 | 25.521 | 192 | 118 | 4 | 176 | 366 | 225 | 392 | 8.04e-16 | 80.1 |
| MS.gene065314.t1 | AT1G34460 | 25.521 | 192 | 118 | 4 | 176 | 366 | 225 | 392 | 8.04e-16 | 80.1 |
| MS.gene065314.t1 | AT1G34460 | 25.907 | 193 | 119 | 4 | 176 | 366 | 225 | 395 | 8.41e-16 | 80.1 |
| MS.gene065314.t1 | AT1G34460 | 25.907 | 193 | 119 | 4 | 176 | 366 | 225 | 395 | 9.60e-16 | 80.1 |
| MS.gene065314.t1 | AT1G34460 | 25.907 | 193 | 119 | 4 | 176 | 366 | 225 | 395 | 9.60e-16 | 80.1 |
| MS.gene065314.t1 | AT1G34460 | 25.907 | 193 | 119 | 4 | 176 | 366 | 225 | 395 | 9.60e-16 | 80.1 |
| MS.gene065314.t1 | AT1G34460 | 25.907 | 193 | 119 | 4 | 176 | 366 | 225 | 395 | 9.60e-16 | 80.1 |
| MS.gene065314.t1 | AT1G34460 | 25.907 | 193 | 119 | 4 | 176 | 366 | 211 | 381 | 1.07e-15 | 79.7 |
| MS.gene065314.t1 | AT1G34460 | 25.907 | 193 | 119 | 4 | 176 | 366 | 225 | 395 | 1.07e-15 | 79.7 |
Find 92 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGAAATGTTACCTTTCT+TGG | 0.133114 | 4.4:-63958125 | None:intergenic |
| CTTAAATCCAACTGAAATTC+AGG | 0.218558 | 4.4:+63957534 | MS.gene065314:CDS |
| TTAGATCATCAGAAGATTTC+AGG | 0.248087 | 4.4:+63957813 | MS.gene065314:CDS |
| TTCTTGCGGATGGCGGTTAA+AGG | 0.248838 | 4.4:-63960063 | None:intergenic |
| AACAATGTTTCAAGCAGTTT+TGG | 0.255031 | 4.4:-63960285 | None:intergenic |
| TGCTTCTGATTCTGAGTTCC+TGG | 0.256521 | 4.4:-63957394 | None:intergenic |
| AGGTAACATTTCTGAACTTT+TGG | 0.265548 | 4.4:+63958132 | MS.gene065314:CDS |
| CTTAAACTTCCTTCCTTCTA+TGG | 0.274701 | 4.4:+63959789 | MS.gene065314:CDS |
| TTTCAGGTGCTTAGATGATT+TGG | 0.298761 | 4.4:+63957829 | MS.gene065314:CDS |
| TCCAAGCATGCGTGCGATAC+TGG | 0.334324 | 4.4:+63958520 | MS.gene065314:CDS |
| TGTACTGTTTCCATGAAGTT+AGG | 0.339878 | 4.4:-63958485 | None:intergenic |
| TGGTTGGAACTCATCCTAAA+AGG | 0.349846 | 4.4:-63957863 | None:intergenic |
| CAAATCTGATGCTTTGTAAG+AGG | 0.356045 | 4.4:-63959986 | None:intergenic |
| CCTGGTGCTACCTCCTTCAT+TGG | 0.361989 | 4.4:-63957376 | None:intergenic |
| GAAACACCTGAGGAAAGTTT+TGG | 0.367596 | 4.4:-63959470 | None:intergenic |
| GCATCTATGTCAGCGACATC+TGG | 0.374347 | 4.4:-63958169 | None:intergenic |
| TAGCATTGAGTTGGAGTACT+TGG | 0.388611 | 4.4:+63959726 | MS.gene065314:CDS |
| GAAGATGCAGCGACCATAGA+AGG | 0.394096 | 4.4:-63959802 | None:intergenic |
| GAACTAACACTGATGAACTA+TGG | 0.399485 | 4.4:+63959763 | MS.gene065314:CDS |
| TCACTGTATATCTCATTGAT+TGG | 0.404894 | 4.4:+63958870 | MS.gene065314:CDS |
| TGATTGACAGGTAGTAAAAC+TGG | 0.408227 | 4.4:+63959399 | MS.gene065314:intron |
| AAGGCCTTATCCTAACTTCA+TGG | 0.409072 | 4.4:+63958475 | MS.gene065314:CDS |
| CAAATTGTTGCAGCCAAGAA+AGG | 0.441666 | 4.4:+63958112 | MS.gene065314:CDS |
| CCTTTGAGTTCTCAGAAGAA+AGG | 0.448840 | 4.4:+63957941 | MS.gene065314:CDS |
| ACCAGTATCGCACGCATGCT+TGG | 0.449229 | 4.4:-63958521 | None:intergenic |
| GGAACCTCATTTGAAACATC+AGG | 0.452258 | 4.4:-63957725 | None:intergenic |
| GCTGTGGCTTTAAGTACATC+TGG | 0.460174 | 4.4:+63957343 | MS.gene065314:CDS |
| TCTTGCGGATGGCGGTTAAA+GGG | 0.462277 | 4.4:-63960062 | None:intergenic |
| CTCAAAACCGGTGAGTTCAA+TGG | 0.463382 | 4.4:+63957781 | MS.gene065314:CDS |
| GTTTCCATGAAGTTAGGATA+AGG | 0.469825 | 4.4:-63958479 | None:intergenic |
| TTTGAAACATCAGGTTGAGC+AGG | 0.471682 | 4.4:-63957716 | None:intergenic |
| AAGAGTGTCACTCTGAAAGC+TGG | 0.489355 | 4.4:+63957289 | MS.gene065314:CDS |
| CGCATTTCCATTGAACTCAC+CGG | 0.493862 | 4.4:-63957788 | None:intergenic |
| AAGAGAGAGACTTCAGCTGC+TGG | 0.496709 | 4.4:+63958916 | MS.gene065314:CDS |
| ATGTCTGCCAGGCTAAGAAA+AGG | 0.496711 | 4.4:+63957681 | MS.gene065314:intron |
| GAGGCATACTGTTCAAGAGT+TGG | 0.504331 | 4.4:-63959967 | None:intergenic |
| TCAACCTGATGTTTCAAATG+AGG | 0.507462 | 4.4:+63957721 | MS.gene065314:CDS |
| TGCGTGCGATACTGGTTGAT+TGG | 0.508489 | 4.4:+63958528 | MS.gene065314:CDS |
| GAGCAGATATTCGAGATGTC+TGG | 0.508698 | 4.4:-63957916 | None:intergenic |
| TATGCAACCTGAATTTCAGT+TGG | 0.513953 | 4.4:-63957541 | None:intergenic |
| AATTCATGTTCAGGTTTCTG+AGG | 0.514222 | 4.4:+63958817 | MS.gene065314:intron |
| GGTGCTACCTCCTTCATTGG+TGG | 0.514272 | 4.4:-63957373 | None:intergenic |
| GGAGTACTTGGCAAATTACC+TGG | 0.519674 | 4.4:+63959738 | MS.gene065314:CDS |
| ATTGTGGCGAAAATACAAAC+AGG | 0.527010 | 4.4:+63957506 | MS.gene065314:CDS |
| AGCAAATAGTTGATATGAAG+AGG | 0.537833 | 4.4:-63959440 | None:intergenic |
| TGGACAGTTACCACCAATGA+AGG | 0.540275 | 4.4:+63957363 | MS.gene065314:CDS |
| CGAGCACGAGTCAATCGACT+TGG | 0.540414 | 4.4:-63957319 | None:intergenic |
| GTTCATAGCTGACTCAAAAC+CGG | 0.542331 | 4.4:+63957769 | MS.gene065314:CDS |
| TCATCAGTGTTAGTTCAGCC+AGG | 0.544691 | 4.4:-63959756 | None:intergenic |
| TTGTGTGTACTTCTTGCGGA+TGG | 0.546451 | 4.4:-63960073 | None:intergenic |
| GCAGAGGCCTAGCATTGAGT+TGG | 0.548505 | 4.4:+63959717 | MS.gene065314:intron |
| CCAATGAAGGAGGTAGCACC+AGG | 0.548598 | 4.4:+63957376 | MS.gene065314:CDS |
| CTACTACCAAAACTTTCCTC+AGG | 0.552988 | 4.4:+63959464 | MS.gene065314:CDS |
| ATTCATGTTCAGGTTTCTGA+GGG | 0.554200 | 4.4:+63958818 | MS.gene065314:intron |
| ATTGTTTGTGCCACACTGGT+TGG | 0.556087 | 4.4:-63957879 | None:intergenic |
| CTTCCGTGTTTCTTGCACGA+TGG | 0.556981 | 4.4:+63959821 | MS.gene065314:CDS |
| TAGATCAGTCAAGCCACCCA+TGG | 0.558247 | 4.4:+63959848 | MS.gene065314:CDS |
| GGTGGTAGCTCAGCAGCTGA+TGG | 0.562864 | 4.4:-63957746 | None:intergenic |
| AAGTACTCCAACTCAATGCT+AGG | 0.564248 | 4.4:-63959724 | None:intergenic |
| GGATAACACATACGTAAAAG+AGG | 0.568506 | 4.4:+63959102 | MS.gene065314:CDS |
| CATATATATCAGCAGCATAG+TGG | 0.569484 | 4.4:-63958219 | None:intergenic |
| TGTCTTGTGTGTACTTCTTG+CGG | 0.570627 | 4.4:-63960077 | None:intergenic |
| AGAGAGAGACTTCAGCTGCT+GGG | 0.571332 | 4.4:+63958917 | MS.gene065314:CDS |
| ACTGGTTGATTGGCTTGTTG+AGG | 0.576476 | 4.4:+63958538 | MS.gene065314:CDS |
| AGCGGCACAAGCTTCCTACA+AGG | 0.577919 | 4.4:+63959602 | MS.gene065314:CDS |
| ATTGACTCGTGCTCGAGCTG+TGG | 0.579601 | 4.4:+63957327 | MS.gene065314:CDS |
| CAAGATGTCACTAACAATTG+TGG | 0.589172 | 4.4:+63957490 | MS.gene065314:CDS |
| CCTTTCTTCTGAGAACTCAA+AGG | 0.595834 | 4.4:-63957941 | None:intergenic |
| GCATAGTGGCTGCATAGTTG+AGG | 0.597253 | 4.4:-63958205 | None:intergenic |
| TTGTAGGAGGTTTCTTCGAG+CGG | 0.597311 | 4.4:+63959584 | MS.gene065314:intron |
| TGACCACTTGCGTGTTGCTG+AGG | 0.600917 | 4.4:+63958240 | MS.gene065314:CDS |
| GATTATTGTTTGTGCCACAC+TGG | 0.602071 | 4.4:-63957883 | None:intergenic |
| TGAAGACTTCTGCTTCATCA+CGG | 0.603644 | 4.4:+63959081 | MS.gene065314:CDS |
| TGTGTACTTCTTGCGGATGG+CGG | 0.608917 | 4.4:-63960070 | None:intergenic |
| ATGCAGCGACCATAGAAGGA+AGG | 0.622018 | 4.4:-63959798 | None:intergenic |
| AGATCAGTCAAGCCACCCAT+GGG | 0.623354 | 4.4:+63959849 | MS.gene065314:CDS |
| CAAGAAGTACACACAAGACA+AGG | 0.627309 | 4.4:+63960080 | MS.gene065314:CDS |
| AGACATCTCGAATATCTGCT+CGG | 0.628981 | 4.4:+63957918 | MS.gene065314:CDS |
| CGGTGAGTTCAATGGAAATG+CGG | 0.632380 | 4.4:+63957789 | MS.gene065314:CDS |
| TGTCCATCGTGCAAGAAACA+CGG | 0.632857 | 4.4:-63959824 | None:intergenic |
| AGCAGAAGTCTTCAATACGA+GGG | 0.635042 | 4.4:-63959072 | None:intergenic |
| CCAGGCTAAGAAAAGGAAGG+TGG | 0.645605 | 4.4:+63957688 | MS.gene065314:intron |
| AAACCTCAGCAACACGCAAG+TGG | 0.651996 | 4.4:-63958243 | None:intergenic |
| CTGCCAGGCTAAGAAAAGGA+AGG | 0.656987 | 4.4:+63957685 | MS.gene065314:intron |
| AAGCAGAAGTCTTCAATACG+AGG | 0.666457 | 4.4:-63959073 | None:intergenic |
| GCAGAAGTCTTCAATACGAG+GGG | 0.667503 | 4.4:-63959071 | None:intergenic |
| GAAAAGAACTAACCCATGGG+TGG | 0.679908 | 4.4:-63959861 | None:intergenic |
| TAACACATACGTAAAAGAGG+AGG | 0.680647 | 4.4:+63959105 | MS.gene065314:CDS |
| AGGATGAGTTCCAACCAGTG+TGG | 0.684018 | 4.4:+63957869 | MS.gene065314:CDS |
| ACAGTTACCACCAATGAAGG+AGG | 0.688615 | 4.4:+63957366 | MS.gene065314:CDS |
| TTTGAGTCAGCTATGAACGG+TGG | 0.693132 | 4.4:-63957764 | None:intergenic |
| AATCAATGAGATATACAGTG+AGG | 0.713603 | 4.4:-63958868 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACAGAAGTAGAAATTA+AGG | - | chr4.4:63959931-63959950 | None:intergenic | 20.0% |
| !! | AACTAATATAATACACATCT+AGG | - | chr4.4:63958759-63958778 | None:intergenic | 20.0% |
| !! | AGTTATGTTACAAAGTAAAT+AGG | - | chr4.4:63960190-63960209 | None:intergenic | 20.0% |
| !! | GTTATGTTACAAAGTAAATA+GGG | - | chr4.4:63960189-63960208 | None:intergenic | 20.0% |
| !! | TAGTCATTAGATTTCATTTA+GGG | + | chr4.4:63959279-63959298 | MS.gene065314:intron | 20.0% |
| !! | TTTATAAAATGCATGCTAAT+CGG | + | chr4.4:63958330-63958349 | MS.gene065314:intron | 20.0% |
| !! | TTTCTTTGAGTAATTTCATA+TGG | - | chr4.4:63959902-63959921 | None:intergenic | 20.0% |
| !!! | ATAAATGACTTTTAGTTAGT+TGG | + | chr4.4:63958045-63958064 | MS.gene065314:intron | 20.0% |
| ! | AAACAAGAACCATTTGATAT+TGG | - | chr4.4:63957570-63957589 | None:intergenic | 25.0% |
| ! | AAATGAAATCTAATGACTAG+AGG | - | chr4.4:63959278-63959297 | None:intergenic | 25.0% |
| ! | ACAATGTACTACATAAATAG+AGG | - | chr4.4:63957971-63957990 | None:intergenic | 25.0% |
| ! | ATGAGCATTACTAAACATAA+TGG | - | chr4.4:63959005-63959024 | None:intergenic | 25.0% |
| ! | CAATGTACTACATAAATAGA+GGG | - | chr4.4:63957970-63957989 | None:intergenic | 25.0% |
| ! | CAATTATCTTAGTACATTCT+TGG | + | chr4.4:63959559-63959578 | MS.gene065314:intron | 25.0% |
| ! | CTAGTCATTAGATTTCATTT+AGG | + | chr4.4:63959278-63959297 | MS.gene065314:intron | 25.0% |
| ! | TGCATATATCCAATATCAAA+TGG | + | chr4.4:63957558-63957577 | MS.gene065314:intron | 25.0% |
| ! | TTTGAGTAATTTCATATGGA+AGG | - | chr4.4:63959898-63959917 | None:intergenic | 25.0% |
| ! | TTTGTCTTGAAATGTATTGA+AGG | + | chr4.4:63957589-63957608 | MS.gene065314:intron | 25.0% |
| !! | CTCTCTTTCAATACAATTTT+TGG | - | chr4.4:63958903-63958922 | None:intergenic | 25.0% |
| !! | TCTTGAACAGATTTCTTTTA+TGG | - | chr4.4:63958015-63958034 | None:intergenic | 25.0% |
| !! | TGATTAATACTAAAGTACCA+AGG | + | chr4.4:63959168-63959187 | MS.gene065314:intron | 25.0% |
| !! | TTTCATTTAGGGTCTTAAAA+AGG | + | chr4.4:63959290-63959309 | MS.gene065314:intron | 25.0% |
| !! | TTTTTGTAAAGACTACTGAA+CGG | - | chr4.4:63959514-63959533 | None:intergenic | 25.0% |
| !!! | AACTTAGTTGTGGTTATTTT+TGG | + | chr4.4:63958078-63958097 | MS.gene065314:intron | 25.0% |
| AAAGAAAAGAACTAACCCAT+GGG | - | chr4.4:63959867-63959886 | None:intergenic | 30.0% | |
| AAGGATTCATATCTCAATAG+TGG | + | chr4.4:63957608-63957627 | MS.gene065314:intron | 30.0% | |
| AATCAATGAGATATACAGTG+AGG | - | chr4.4:63958871-63958890 | None:intergenic | 30.0% | |
| AGTAATGCTCAATACAAATC+TGG | - | chr4.4:63959671-63959690 | None:intergenic | 30.0% | |
| ATATCTTCCTCGTAAAAAGA+GGG | + | chr4.4:63957459-63957478 | MS.gene065314:CDS | 30.0% | |
| CAATTGAATAAAACATGCAG+AGG | + | chr4.4:63959701-63959720 | MS.gene065314:intron | 30.0% | |
| CTGAAAGTAGCAATTTCATA+TGG | + | chr4.4:63959207-63959226 | MS.gene065314:intron | 30.0% | |
| CTTAAATCCAACTGAAATTC+AGG | + | chr4.4:63957534-63957553 | MS.gene065314:CDS | 30.0% | |
| GACAAACAACTTAGCATAAA+AGG | - | chr4.4:63958428-63958447 | None:intergenic | 30.0% | |
| TATGTGCAGTAAAGCAATAT+TGG | - | chr4.4:63958301-63958320 | None:intergenic | 30.0% | |
| TCACTGTATATCTCATTGAT+TGG | + | chr4.4:63958870-63958889 | MS.gene065314:CDS | 30.0% | |
| TCATATTGTTCAGCTAAACT+TGG | - | chr4.4:63958616-63958635 | None:intergenic | 30.0% | |
| TGAACATGAATTCAACACAT+GGG | - | chr4.4:63958809-63958828 | None:intergenic | 30.0% | |
| TGTACTAAGATAATTGCAAG+AGG | - | chr4.4:63959555-63959574 | None:intergenic | 30.0% | |
| TTAGATCATCAGAAGATTTC+AGG | + | chr4.4:63957813-63957832 | MS.gene065314:CDS | 30.0% | |
| TTCAGAAATGTTACCTTTCT+TGG | - | chr4.4:63958128-63958147 | None:intergenic | 30.0% | |
| ! | AACAATGTTTCAAGCAGTTT+TGG | - | chr4.4:63960288-63960307 | None:intergenic | 30.0% |
| ! | AGCAAATAGTTGATATGAAG+AGG | - | chr4.4:63959443-63959462 | None:intergenic | 30.0% |
| ! | AGGTAACATTTCTGAACTTT+TGG | + | chr4.4:63958132-63958151 | MS.gene065314:CDS | 30.0% |
| ! | TAAACATAATGGAACACAAG+AGG | - | chr4.4:63958994-63959013 | None:intergenic | 30.0% |
| !! | CTCTGCATGTTTTATTCAAT+TGG | - | chr4.4:63959703-63959722 | None:intergenic | 30.0% |
| !! | TACTCAATGTATTGATTGAC+AGG | + | chr4.4:63959387-63959406 | MS.gene065314:intron | 30.0% |
| !! | TTCATATCTCAATAGTGGAT+AGG | + | chr4.4:63957613-63957632 | MS.gene065314:intron | 30.0% |
| !!! | TAGTACATTCTTGGTTTTGT+AGG | + | chr4.4:63959568-63959587 | MS.gene065314:intron | 30.0% |
| !!! | TCTTTTAGAATTGGCTCTTA+GGG | - | chr4.4:63957422-63957441 | None:intergenic | 30.0% |
| !!! | TGAAACTGCTCTTTTAGAAT+TGG | - | chr4.4:63957431-63957450 | None:intergenic | 30.0% |
| !!! | TTTGCTGTTTTGTAAGTATG+TGG | + | chr4.4:63959338-63959357 | MS.gene065314:intron | 30.0% |
| ACAAGGTAAAAAGATCGATC+TGG | + | chr4.4:63959619-63959638 | MS.gene065314:intron | 35.0% | |
| ATTGTGGCGAAAATACAAAC+AGG | + | chr4.4:63957506-63957525 | MS.gene065314:CDS | 35.0% | |
| CAAATCTGATGCTTTGTAAG+AGG | - | chr4.4:63959989-63960008 | None:intergenic | 35.0% | |
| CAAGATGTCACTAACAATTG+TGG | + | chr4.4:63957490-63957509 | MS.gene065314:CDS | 35.0% | |
| CAAGGTAAAAAGATCGATCT+GGG | + | chr4.4:63959620-63959639 | MS.gene065314:intron | 35.0% | |
| CACGTAAGTTCTCAACTTAA+TGG | + | chr4.4:63958961-63958980 | MS.gene065314:intron | 35.0% | |
| CATATATATCAGCAGCATAG+TGG | - | chr4.4:63958222-63958241 | None:intergenic | 35.0% | |
| CATATCTTCCTCGTAAAAAG+AGG | + | chr4.4:63957458-63957477 | MS.gene065314:CDS | 35.0% | |
| CATGTGTTGAATTCATGTTC+AGG | + | chr4.4:63958808-63958827 | MS.gene065314:intron | 35.0% | |
| CTGAACATGAATTCAACACA+TGG | - | chr4.4:63958810-63958829 | None:intergenic | 35.0% | |
| CTTAAACTTCCTTCCTTCTA+TGG | + | chr4.4:63959789-63959808 | MS.gene065314:CDS | 35.0% | |
| GAAAGAAAAGAACTAACCCA+TGG | - | chr4.4:63959868-63959887 | None:intergenic | 35.0% | |
| GAACTAACACTGATGAACTA+TGG | + | chr4.4:63959763-63959782 | MS.gene065314:CDS | 35.0% | |
| GGATAACACATACGTAAAAG+AGG | + | chr4.4:63959102-63959121 | MS.gene065314:CDS | 35.0% | |
| GTTCTCAACTTAATGGAAGT+TGG | + | chr4.4:63958968-63958987 | MS.gene065314:intron | 35.0% | |
| GTTTCCATGAAGTTAGGATA+AGG | - | chr4.4:63958482-63958501 | None:intergenic | 35.0% | |
| TAACACATACGTAAAAGAGG+AGG | + | chr4.4:63959105-63959124 | MS.gene065314:CDS | 35.0% | |
| TATGCAACCTGAATTTCAGT+TGG | - | chr4.4:63957544-63957563 | None:intergenic | 35.0% | |
| TCAACCTGATGTTTCAAATG+AGG | + | chr4.4:63957721-63957740 | MS.gene065314:CDS | 35.0% | |
| TGATTGACAGGTAGTAAAAC+TGG | + | chr4.4:63959399-63959418 | MS.gene065314:intron | 35.0% | |
| TGTACTGTTTCCATGAAGTT+AGG | - | chr4.4:63958488-63958507 | None:intergenic | 35.0% | |
| ! | AATTCATGTTCAGGTTTCTG+AGG | + | chr4.4:63958817-63958836 | MS.gene065314:intron | 35.0% |
| ! | ATTCATGTTCAGGTTTCTGA+GGG | + | chr4.4:63958818-63958837 | MS.gene065314:intron | 35.0% |
| ! | GATCGATCTTTTTACCTTGT+AGG | - | chr4.4:63959619-63959638 | None:intergenic | 35.0% |
| ! | TTTCAGGTGCTTAGATGATT+TGG | + | chr4.4:63957829-63957848 | MS.gene065314:CDS | 35.0% |
| !! | CATTAAGTTGAGAACTTACG+TGG | - | chr4.4:63958963-63958982 | None:intergenic | 35.0% |
| !! | GTTTTGATGTATGCTTTCCT+TGG | - | chr4.4:63959188-63959207 | None:intergenic | 35.0% |
| !!! | ACTTTTAGTTAGTTGGTGAC+TGG | + | chr4.4:63958052-63958071 | MS.gene065314:intron | 35.0% |
| !!! | CATTTTTTCAGCTGTCAAGA+AGG | + | chr4.4:63958456-63958475 | MS.gene065314:intron | 35.0% |
| !!! | CTCTTTTAGAATTGGCTCTT+AGG | - | chr4.4:63957423-63957442 | None:intergenic | 35.0% |
| !!! | CTTTTAGAATTGGCTCTTAG+GGG | - | chr4.4:63957421-63957440 | None:intergenic | 35.0% |
| !!! | TACATTCTTGGTTTTGTAGG+AGG | + | chr4.4:63959571-63959590 | MS.gene065314:intron | 35.0% |
| AAGCAGAAGTCTTCAATACG+AGG | - | chr4.4:63959076-63959095 | None:intergenic | 40.0% | |
| AAGTACTCCAACTCAATGCT+AGG | - | chr4.4:63959727-63959746 | None:intergenic | 40.0% | |
| AAGTTGACAAGAAACACCTG+AGG | - | chr4.4:63959483-63959502 | None:intergenic | 40.0% | |
| ACAAGGTATGTCAGAAAGAG+AGG | + | chr4.4:63960097-63960116 | MS.gene065314:intron | 40.0% | |
| AGACATCTCGAATATCTGCT+CGG | + | chr4.4:63957918-63957937 | MS.gene065314:CDS | 40.0% | |
| AGCAGAAGTCTTCAATACGA+GGG | - | chr4.4:63959075-63959094 | None:intergenic | 40.0% | |
| CAAATTGTTGCAGCCAAGAA+AGG | + | chr4.4:63958112-63958131 | MS.gene065314:CDS | 40.0% | |
| CTACTACCAAAACTTTCCTC+AGG | + | chr4.4:63959464-63959483 | MS.gene065314:CDS | 40.0% | |
| GATTATTGTTTGTGCCACAC+TGG | - | chr4.4:63957886-63957905 | None:intergenic | 40.0% | |
| TGAAGACTTCTGCTTCATCA+CGG | + | chr4.4:63959081-63959100 | MS.gene065314:CDS | 40.0% | |
| TGACTGGTGTAACTTAGTTG+TGG | + | chr4.4:63958068-63958087 | MS.gene065314:intron | 40.0% | |
| TGGTAGAGACAATTGTGACA+GGG | - | chr4.4:63958281-63958300 | None:intergenic | 40.0% | |
| TGGTTGGAACTCATCCTAAA+AGG | - | chr4.4:63957866-63957885 | None:intergenic | 40.0% | |
| TGTCTTGTGTGTACTTCTTG+CGG | - | chr4.4:63960080-63960099 | None:intergenic | 40.0% | |
| TTGGTAGAGACAATTGTGAC+AGG | - | chr4.4:63958282-63958301 | None:intergenic | 40.0% | |
| ! | AAGGCCTTATCCTAACTTCA+TGG | + | chr4.4:63958475-63958494 | MS.gene065314:CDS | 40.0% |
| ! | AGAATTGCCCTCTTTTTACG+AGG | - | chr4.4:63957469-63957488 | None:intergenic | 40.0% |
| ! | CAAGAAGTACACACAAGACA+AGG | + | chr4.4:63960080-63960099 | MS.gene065314:CDS | 40.0% |
| ! | CCTTTCTTCTGAGAACTCAA+AGG | - | chr4.4:63957944-63957963 | None:intergenic | 40.0% |
| ! | CCTTTGAGTTCTCAGAAGAA+AGG | + | chr4.4:63957941-63957960 | MS.gene065314:CDS | 40.0% |
| ! | GAAACACCTGAGGAAAGTTT+TGG | - | chr4.4:63959473-63959492 | None:intergenic | 40.0% |
| ! | GGAACCTCATTTGAAACATC+AGG | - | chr4.4:63957728-63957747 | None:intergenic | 40.0% |
| ! | GTTCATAGCTGACTCAAAAC+CGG | + | chr4.4:63957769-63957788 | MS.gene065314:CDS | 40.0% |
| ! | TGGAAGACAATGCACCTTTT+AGG | + | chr4.4:63957849-63957868 | MS.gene065314:CDS | 40.0% |
| !! | CTGAGGAAAGTTTTGGTAGT+AGG | - | chr4.4:63959466-63959485 | None:intergenic | 40.0% |
| !! | TAGCATTGAGTTGGAGTACT+TGG | + | chr4.4:63959726-63959745 | MS.gene065314:CDS | 40.0% |
| !! | TTTGAAACATCAGGTTGAGC+AGG | - | chr4.4:63957719-63957738 | None:intergenic | 40.0% |
| !!! | CTGTTACTTTTATGTCTGCC+AGG | + | chr4.4:63957670-63957689 | MS.gene065314:intron | 40.0% |
| !!! | GGTTTTGAGTCAGCTATGAA+CGG | - | chr4.4:63957770-63957789 | None:intergenic | 40.0% |
| ACAGTTACCACCAATGAAGG+AGG | + | chr4.4:63957366-63957385 | MS.gene065314:CDS | 45.0% | |
| ATGTCTGCCAGGCTAAGAAA+AGG | + | chr4.4:63957681-63957700 | MS.gene065314:intron | 45.0% | |
| ATTGTTTGTGCCACACTGGT+TGG | - | chr4.4:63957882-63957901 | None:intergenic | 45.0% | |
| CGCATTTCCATTGAACTCAC+CGG | - | chr4.4:63957791-63957810 | None:intergenic | 45.0% | |
| CGGTGAGTTCAATGGAAATG+CGG | + | chr4.4:63957789-63957808 | MS.gene065314:CDS | 45.0% | |
| CTCAAAACCGGTGAGTTCAA+TGG | + | chr4.4:63957781-63957800 | MS.gene065314:CDS | 45.0% | |
| GAAAAGAACTAACCCATGGG+TGG | - | chr4.4:63959864-63959883 | None:intergenic | 45.0% | |
| GAGCAGATATTCGAGATGTC+TGG | - | chr4.4:63957919-63957938 | None:intergenic | 45.0% | |
| GAGGCATACTGTTCAAGAGT+TGG | - | chr4.4:63959970-63959989 | None:intergenic | 45.0% | |
| GCAGAAGTCTTCAATACGAG+GGG | - | chr4.4:63959074-63959093 | None:intergenic | 45.0% | |
| TCATCAGTGTTAGTTCAGCC+AGG | - | chr4.4:63959759-63959778 | None:intergenic | 45.0% | |
| TGCTTCTGATTCTGAGTTCC+TGG | - | chr4.4:63957397-63957416 | None:intergenic | 45.0% | |
| TGGACAGTTACCACCAATGA+AGG | + | chr4.4:63957363-63957382 | MS.gene065314:CDS | 45.0% | |
| TGTCCATCGTGCAAGAAACA+CGG | - | chr4.4:63959827-63959846 | None:intergenic | 45.0% | |
| TTGTAGGAGGTTTCTTCGAG+CGG | + | chr4.4:63959584-63959603 | MS.gene065314:intron | 45.0% | |
| TTGTGTGTACTTCTTGCGGA+TGG | - | chr4.4:63960076-63960095 | None:intergenic | 45.0% | |
| TTTGAGTCAGCTATGAACGG+TGG | - | chr4.4:63957767-63957786 | None:intergenic | 45.0% | |
| ! | GGAGTACTTGGCAAATTACC+TGG | + | chr4.4:63959738-63959757 | MS.gene065314:CDS | 45.0% |
| !! | AAGAGTGTCACTCTGAAAGC+TGG | + | chr4.4:63957289-63957308 | MS.gene065314:CDS | 45.0% |
| !! | ACTGGTTGATTGGCTTGTTG+AGG | + | chr4.4:63958538-63958557 | MS.gene065314:CDS | 45.0% |
| !! | GCTGTGGCTTTAAGTACATC+TGG | + | chr4.4:63957343-63957362 | MS.gene065314:CDS | 45.0% |
| AAACCTCAGCAACACGCAAG+TGG | - | chr4.4:63958246-63958265 | None:intergenic | 50.0% | |
| AAGAGAGAGACTTCAGCTGC+TGG | + | chr4.4:63958916-63958935 | MS.gene065314:CDS | 50.0% | |
| AGAGAGAGACTTCAGCTGCT+GGG | + | chr4.4:63958917-63958936 | MS.gene065314:CDS | 50.0% | |
| AGATCAGTCAAGCCACCCAT+GGG | + | chr4.4:63959849-63959868 | MS.gene065314:CDS | 50.0% | |
| AGGATGAGTTCCAACCAGTG+TGG | + | chr4.4:63957869-63957888 | MS.gene065314:CDS | 50.0% | |
| ATGCAGCGACCATAGAAGGA+AGG | - | chr4.4:63959801-63959820 | None:intergenic | 50.0% | |
| CCAGGCTAAGAAAAGGAAGG+TGG | + | chr4.4:63957688-63957707 | MS.gene065314:intron | 50.0% | |
| CTGCCAGGCTAAGAAAAGGA+AGG | + | chr4.4:63957685-63957704 | MS.gene065314:intron | 50.0% | |
| CTTCCGTGTTTCTTGCACGA+TGG | + | chr4.4:63959821-63959840 | MS.gene065314:CDS | 50.0% | |
| GAAGATGCAGCGACCATAGA+AGG | - | chr4.4:63959805-63959824 | None:intergenic | 50.0% | |
| GCATAGTGGCTGCATAGTTG+AGG | - | chr4.4:63958208-63958227 | None:intergenic | 50.0% | |
| GCATCTATGTCAGCGACATC+TGG | - | chr4.4:63958172-63958191 | None:intergenic | 50.0% | |
| TAGATCAGTCAAGCCACCCA+TGG | + | chr4.4:63959848-63959867 | MS.gene065314:CDS | 50.0% | |
| TGTGTACTTCTTGCGGATGG+CGG | - | chr4.4:63960073-63960092 | None:intergenic | 50.0% | |
| ! | CCACCTTCCTTTTCTTAGCC+TGG | - | chr4.4:63957691-63957710 | None:intergenic | 50.0% |
| ! | TCTTGCGGATGGCGGTTAAA+GGG | - | chr4.4:63960065-63960084 | None:intergenic | 50.0% |
| ! | TGCGTGCGATACTGGTTGAT+TGG | + | chr4.4:63958528-63958547 | MS.gene065314:CDS | 50.0% |
| ! | TTCTTGCGGATGGCGGTTAA+AGG | - | chr4.4:63960066-63960085 | None:intergenic | 50.0% |
| ACCAGTATCGCACGCATGCT+TGG | - | chr4.4:63958524-63958543 | None:intergenic | 55.0% | |
| AGCGGCACAAGCTTCCTACA+AGG | + | chr4.4:63959602-63959621 | MS.gene065314:CDS | 55.0% | |
| CCAATGAAGGAGGTAGCACC+AGG | + | chr4.4:63957376-63957395 | MS.gene065314:CDS | 55.0% | |
| CGAGCACGAGTCAATCGACT+TGG | - | chr4.4:63957322-63957341 | None:intergenic | 55.0% | |
| TCCAAGCATGCGTGCGATAC+TGG | + | chr4.4:63958520-63958539 | MS.gene065314:CDS | 55.0% | |
| ! | GCAGAGGCCTAGCATTGAGT+TGG | + | chr4.4:63959717-63959736 | MS.gene065314:intron | 55.0% |
| ! | GGTGCTACCTCCTTCATTGG+TGG | - | chr4.4:63957376-63957395 | None:intergenic | 55.0% |
| ! | TGACCACTTGCGTGTTGCTG+AGG | + | chr4.4:63958240-63958259 | MS.gene065314:CDS | 55.0% |
| !! | ATTGACTCGTGCTCGAGCTG+TGG | + | chr4.4:63957327-63957346 | MS.gene065314:CDS | 55.0% |
| !! | CCTGGTGCTACCTCCTTCAT+TGG | - | chr4.4:63957379-63957398 | None:intergenic | 55.0% |
| GGTGGTAGCTCAGCAGCTGA+TGG | - | chr4.4:63957749-63957768 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 63957283 | 63960311 | 63957283 | ID=MS.gene065314 |
| chr4.4 | mRNA | 63957283 | 63960311 | 63957283 | ID=MS.gene065314.t1;Parent=MS.gene065314 |
| chr4.4 | exon | 63957283 | 63957555 | 63957283 | ID=MS.gene065314.t1.exon1;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63957283 | 63957555 | 63957283 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| chr4.4 | exon | 63957692 | 63957962 | 63957692 | ID=MS.gene065314.t1.exon2;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63957692 | 63957962 | 63957692 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| chr4.4 | exon | 63958107 | 63958261 | 63958107 | ID=MS.gene065314.t1.exon3;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63958107 | 63958261 | 63958107 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| chr4.4 | exon | 63958467 | 63958559 | 63958467 | ID=MS.gene065314.t1.exon4;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63958467 | 63958559 | 63958467 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| chr4.4 | exon | 63958830 | 63958963 | 63958830 | ID=MS.gene065314.t1.exon5;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63958830 | 63958963 | 63958830 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| chr4.4 | exon | 63959051 | 63959126 | 63959051 | ID=MS.gene065314.t1.exon6;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63959051 | 63959126 | 63959051 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| chr4.4 | exon | 63959409 | 63959485 | 63959409 | ID=MS.gene065314.t1.exon7;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63959409 | 63959485 | 63959409 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| chr4.4 | exon | 63959590 | 63959623 | 63959590 | ID=MS.gene065314.t1.exon8;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63959590 | 63959623 | 63959590 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| chr4.4 | exon | 63959721 | 63959870 | 63959721 | ID=MS.gene065314.t1.exon9;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63959721 | 63959870 | 63959721 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| chr4.4 | exon | 63959964 | 63960101 | 63959964 | ID=MS.gene065314.t1.exon10;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63959964 | 63960101 | 63959964 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| chr4.4 | exon | 63960258 | 63960311 | 63960258 | ID=MS.gene065314.t1.exon11;Parent=MS.gene065314.t1 |
| chr4.4 | CDS | 63960258 | 63960311 | 63960258 | ID=cds.MS.gene065314.t1;Parent=MS.gene065314.t1 |
| Gene Sequence |
| Protein sequence |
