AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene062088

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062088.t1 MTR_2g044810 95.693 534 23 0 1 534 1 534 0.0 1033
MS.gene062088.t1 MTR_4g124520 67.658 538 153 5 1 534 1 521 0.0 694
MS.gene062088.t1 MTR_2g044810 98.419 253 4 0 282 534 213 465 0.0 536
MS.gene062088.t1 MTR_2g044810 92.019 213 17 0 1 213 1 213 3.38e-131 390
MS.gene062088.t1 MTR_7g108905 43.199 544 275 8 12 530 18 552 1.93e-147 435
MS.gene062088.t1 MTR_8g042910 42.458 537 260 7 45 534 78 612 9.06e-141 420
MS.gene062088.t1 MTR_7g108900 41.996 531 265 8 38 530 31 556 5.12e-140 416
MS.gene062088.t1 MTR_3g010770 42.486 539 259 8 45 534 39 575 8.46e-139 413
MS.gene062088.t1 MTR_2g044880 40.842 546 290 12 1 534 1 525 2.93e-137 408
MS.gene062088.t1 MTR_7g108875 40.853 563 284 10 12 534 11 564 5.97e-137 408
MS.gene062088.t1 MTR_1g008140 39.792 578 297 13 4 534 34 607 3.01e-134 403
MS.gene062088.t1 MTR_1g083520 41.503 559 269 13 1 533 1 527 2.35e-133 398
MS.gene062088.t1 MTR_1g088020 41.729 532 266 10 42 534 29 555 3.21e-133 398
MS.gene062088.t1 MTR_7g108890 42.272 537 255 9 42 534 37 562 2.36e-132 396
MS.gene062088.t1 MTR_3g091380 38.394 573 290 9 8 534 42 597 2.93e-132 397
MS.gene062088.t1 MTR_4g087980 41.856 485 258 7 60 534 46 516 2.01e-131 392
MS.gene062088.t1 MTR_1g054880 40.853 563 279 8 9 534 13 558 2.02e-131 394
MS.gene062088.t1 MTR_7g112580 40.080 499 272 8 54 534 53 542 7.49e-130 389
MS.gene062088.t1 MTR_1g088225 39.894 564 281 11 6 530 5 549 2.87e-129 388
MS.gene062088.t1 MTR_4g025730 42.329 541 273 14 1 534 1 509 3.20e-129 387
MS.gene062088.t1 MTR_8g023310 42.205 526 268 10 41 534 68 589 9.50e-129 388
MS.gene062088.t1 MTR_4g087970 42.626 495 244 12 67 534 36 517 4.28e-128 384
MS.gene062088.t1 MTR_8g104655 40.541 518 268 10 45 534 36 541 1.34e-127 384
MS.gene062088.t1 MTR_4g025690 40.678 531 283 13 10 530 1 509 9.39e-126 378
MS.gene062088.t1 MTR_7g050870 38.477 512 295 7 38 534 48 554 4.58e-124 375
MS.gene062088.t1 MTR_3g010780 39.726 511 286 9 40 534 70 574 1.07e-123 375
MS.gene062088.t1 MTR_8g042900 40.078 514 284 9 39 534 74 581 1.18e-123 375
MS.gene062088.t1 MTR_7g050950 40.928 474 262 6 76 534 83 553 1.01e-122 371
MS.gene062088.t1 MTR_7g050980 41.270 441 247 5 103 534 118 555 7.36e-121 367
MS.gene062088.t1 MTR_4g025670 44.240 434 227 6 107 534 65 489 1.87e-119 361
MS.gene062088.t1 MTR_8g104645 49.555 337 161 3 207 534 36 372 4.66e-119 355
MS.gene062088.t1 MTR_3g033690 38.416 505 282 9 45 534 36 526 4.13e-118 358
MS.gene062088.t1 MTR_7g112590 36.092 568 311 11 11 533 22 582 4.76e-118 360
MS.gene062088.t1 MTR_3g008640 42.494 433 234 8 110 534 102 527 1.49e-117 357
MS.gene062088.t1 MTR_3g008700 38.812 505 281 10 45 534 36 527 1.71e-117 357
MS.gene062088.t1 MTR_7g053360 38.416 505 283 10 45 534 36 527 1.00e-116 355
MS.gene062088.t1 MTR_3g008720 42.227 431 238 8 110 534 102 527 2.17e-116 354
MS.gene062088.t1 MTR_4g035980 39.842 507 281 11 45 534 40 539 2.91e-116 354
MS.gene062088.t1 MTR_1g083510 35.677 569 313 11 11 533 21 582 3.44e-115 353
MS.gene062088.t1 MTR_1g083470 36.468 521 294 9 38 530 55 566 5.00e-115 352
MS.gene062088.t1 MTR_1g083500 36.468 521 294 9 38 530 55 566 5.00e-115 352
MS.gene062088.t1 MTR_1g083490 36.505 515 302 9 38 530 60 571 2.07e-114 351
MS.gene062088.t1 MTR_1g086210 37.170 530 296 9 40 533 40 568 5.00e-113 347
MS.gene062088.t1 MTR_4g005170 36.117 515 304 9 38 530 60 571 7.65e-113 348
MS.gene062088.t1 MTR_0458s0030 57.795 263 111 0 272 534 52 314 2.08e-112 337
MS.gene062088.t1 MTR_1g088040 57.795 263 111 0 272 534 52 314 2.08e-112 337
MS.gene062088.t1 MTR_4g005180 35.922 515 305 8 38 530 42 553 3.50e-111 342
MS.gene062088.t1 MTR_8g023150 39.768 518 280 13 39 534 75 582 9.63e-109 336
MS.gene062088.t1 MTR_1g086190 36.380 547 300 15 24 533 27 562 6.25e-106 328
MS.gene062088.t1 MTR_7g110560 36.661 551 310 16 8 533 12 548 1.33e-105 327
MS.gene062088.t1 MTR_8g104580 36.680 518 255 13 45 534 28 500 2.15e-102 317
MS.gene062088.t1 MTR_4g124550 38.596 456 254 6 102 534 141 593 3.38e-102 320
MS.gene062088.t1 MTR_7g110440 34.717 530 305 10 41 530 42 570 1.87e-99 312
MS.gene062088.t1 MTR_8g093460 35.249 522 299 12 39 533 41 550 1.11e-94 299
MS.gene062088.t1 MTR_7g110490 36.797 462 253 8 107 529 108 569 1.49e-94 299
MS.gene062088.t1 MTR_7g110510 36.797 462 253 8 107 529 108 569 1.49e-94 299
MS.gene062088.t1 MTR_3g095920 35.702 563 311 18 8 533 15 563 9.37e-94 297
MS.gene062088.t1 MTR_2g044660 43.636 330 180 3 207 534 307 632 1.13e-91 293
MS.gene062088.t1 MTR_2g436040 32.742 507 311 10 44 530 46 542 5.20e-89 286
MS.gene062088.t1 MTR_4g120290 32.824 524 322 9 35 533 53 571 2.78e-88 283
MS.gene062088.t1 MTR_0618s0020 52.863 227 106 1 309 534 2 228 9.76e-88 270
MS.gene062088.t1 MTR_4g120280 32.885 520 315 10 41 533 59 571 3.33e-87 280
MS.gene062088.t1 MTR_8g088610 41.212 330 185 6 207 530 46 372 1.18e-82 262
MS.gene062088.t1 MTR_2g436050 30.902 521 331 10 35 533 50 563 1.94e-81 265
MS.gene062088.t1 MTR_7g110420 34.947 475 258 10 107 530 108 582 1.55e-80 263
MS.gene062088.t1 MTR_5g083620 42.581 310 175 3 226 533 47 355 1.17e-79 254
MS.gene062088.t1 MTR_7g107180 41.987 312 168 5 225 534 7 307 2.01e-78 249
MS.gene062088.t1 MTR_2g105560 39.744 312 173 5 225 534 41 339 7.06e-75 241
MS.gene062088.t1 MTR_0458s0010 32.386 528 276 13 42 530 29 514 6.32e-73 241
MS.gene062088.t1 MTR_7g111560 30.839 548 338 14 8 533 27 555 3.39e-71 238
MS.gene062088.t1 MTR_7g110430 31.897 464 241 10 107 530 108 536 7.04e-71 236
MS.gene062088.t1 MTR_6g088810 38.742 302 160 7 233 523 90 377 3.80e-58 198
MS.gene062088.t1 MTR_7g092780 36.656 311 176 6 225 525 90 389 2.16e-57 196
MS.gene062088.t1 MTR_1g086540 38.264 311 168 7 225 525 50 346 2.88e-57 195
MS.gene062088.t1 MTR_8g102380 37.582 306 164 7 233 525 88 379 1.72e-56 194
MS.gene062088.t1 MTR_6g012800 35.526 304 173 4 224 517 5 295 9.85e-56 190
MS.gene062088.t1 MTR_7g011530 35.855 304 172 5 224 517 5 295 4.99e-54 185
MS.gene062088.t1 MTR_6g024165 35.780 327 176 10 213 523 26 334 1.74e-53 184
MS.gene062088.t1 MTR_5g012600 32.177 317 189 6 222 526 60 362 2.79e-51 179
MS.gene062088.t1 MTR_7g102600 35.144 313 185 5 218 523 92 393 1.15e-50 179
MS.gene062088.t1 MTR_5g095490 35.948 306 170 6 231 524 67 358 8.95e-50 175
MS.gene062088.t1 MTR_6g042660 33.688 282 164 6 221 497 33 296 1.06e-47 169
MS.gene062088.t1 MTR_8g102380 38.645 251 129 5 233 470 88 326 1.32e-47 169
MS.gene062088.t1 MTR_2g039530 36.934 287 149 8 226 501 53 318 2.32e-44 160
MS.gene062088.t1 MTR_4g124740 32.372 312 178 10 223 524 52 340 7.11e-44 159
MS.gene062088.t1 MTR_1g033050 31.962 316 193 6 219 527 12 312 4.04e-43 156
MS.gene062088.t1 MTR_5g083590 30.968 310 164 4 225 533 7 267 2.20e-42 153
MS.gene062088.t1 MTR_6g042690 33.103 290 162 7 221 498 35 304 1.93e-40 149
MS.gene062088.t1 MTR_2g033970 32.588 313 185 8 222 525 53 348 3.49e-39 146
MS.gene062088.t1 MTR_4g074290 31.046 306 193 7 223 523 69 361 1.21e-37 142
MS.gene062088.t1 MTR_5g093970 29.938 324 213 5 201 523 19 329 2.20e-37 141
MS.gene062088.t1 MTR_2g073390 30.938 320 200 8 210 523 57 361 3.73e-37 141
MS.gene062088.t1 MTR_5g088300 31.013 316 195 7 210 523 22 316 1.38e-36 138
MS.gene062088.t1 MTR_0009s0350 31.047 277 175 5 223 494 69 334 2.81e-35 136
MS.gene062088.t1 MTR_0009s0340 31.047 277 175 5 223 494 69 334 2.81e-35 136
MS.gene062088.t1 MTR_8g036225 31.058 293 177 5 217 500 25 301 4.38e-35 134
MS.gene062088.t1 MTR_5g088280 31.894 301 182 7 225 523 39 318 1.88e-34 132
MS.gene062088.t1 MTR_5g088290 31.561 301 184 7 225 523 48 328 5.66e-34 132
MS.gene062088.t1 MTR_2g436600 29.936 314 183 12 222 525 52 338 8.46e-31 123
MS.gene062088.t1 MTR_4g051810 28.889 315 204 6 210 523 22 317 6.49e-30 120
MS.gene062088.t1 MTR_6g025590 40.698 172 89 7 218 379 43 211 3.20e-27 110
MS.gene062088.t1 MTR_2g436070 22.961 331 234 9 10 324 24 349 9.89e-17 82.4
MS.gene062088.t1 MTR_0408s0030 34.694 98 55 1 401 498 36 124 1.86e-16 77.0
MS.gene062088.t1 MTR_6g024200 31.875 160 88 5 365 523 137 276 4.24e-16 79.3
MS.gene062088.t1 MTR_7g102580 45.349 86 37 2 299 379 73 153 2.51e-14 70.9
MS.gene062088.t1 MTR_7g102570 35.185 108 58 3 384 489 3 100 1.60e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062088.t1 AT2G26440 64.717 513 164 4 39 534 35 547 0.0 677
MS.gene062088.t1 AT4G02320 44.309 492 247 9 59 530 30 514 1.03e-138 411
MS.gene062088.t1 AT3G05620 39.091 550 290 8 15 534 7 541 5.47e-138 410
MS.gene062088.t1 AT4G02330 41.404 570 279 11 16 534 6 571 3.45e-137 409
MS.gene062088.t1 AT3G43270 46.756 447 218 5 107 534 80 525 1.04e-136 406
MS.gene062088.t1 AT4G33220 43.788 491 239 7 75 534 39 523 1.75e-134 400
MS.gene062088.t1 AT1G02810 39.243 581 282 11 15 534 7 577 1.48e-132 397
MS.gene062088.t1 AT4G02300 41.187 539 279 9 8 533 18 531 5.84e-132 394
MS.gene062088.t1 AT3G10720 39.065 535 279 8 45 534 83 615 4.11e-130 392
MS.gene062088.t1 AT3G49220 41.459 521 269 11 40 534 86 596 3.45e-129 389
MS.gene062088.t1 AT3G49220 41.459 521 269 11 40 534 131 641 6.81e-129 390
MS.gene062088.t1 AT5G53370 40.077 519 280 10 40 534 74 585 3.19e-127 384
MS.gene062088.t1 AT4G33220 48.148 405 182 5 155 534 1 402 8.13e-127 377
MS.gene062088.t1 AT5G53370 40.077 519 280 10 40 534 110 621 8.41e-127 384
MS.gene062088.t1 AT5G04970 40.074 539 268 12 45 534 88 620 5.76e-126 382
MS.gene062088.t1 AT2G47550 43.871 465 221 6 106 534 98 558 6.86e-125 377
MS.gene062088.t1 AT1G53830 40.076 529 271 9 41 530 62 583 2.10e-123 374
MS.gene062088.t1 AT5G51490 41.223 507 273 8 45 534 38 536 9.89e-123 371
MS.gene062088.t1 AT1G11580 42.177 441 241 7 103 532 118 555 1.64e-121 369
MS.gene062088.t1 AT3G10710 39.608 510 276 9 40 534 69 561 1.73e-121 369
MS.gene062088.t1 AT1G11580 42.177 441 241 7 103 532 139 576 1.78e-121 369
MS.gene062088.t1 AT3G14310 38.404 539 282 7 41 534 59 592 3.44e-121 369
MS.gene062088.t1 AT3G60730 41.921 458 230 8 107 534 68 519 1.59e-120 365
MS.gene062088.t1 AT1G23200 39.888 534 260 13 45 534 38 554 1.95e-120 365
MS.gene062088.t1 AT5G51500 40.472 509 278 9 39 530 36 536 3.42e-120 364
MS.gene062088.t1 AT5G27870 35.165 546 326 8 10 534 24 562 2.82e-119 368
MS.gene062088.t1 AT2G43050 39.305 547 288 12 1 534 1 516 5.58e-118 358
MS.gene062088.t1 AT3G05610 35.009 557 324 7 4 534 21 565 7.39e-116 357
MS.gene062088.t1 AT4G00190 41.582 493 253 13 44 530 7 470 1.88e-114 347
MS.gene062088.t1 AT2G45220 39.645 507 268 15 41 534 30 511 4.78e-114 348
MS.gene062088.t1 AT5G04960 37.132 509 289 9 40 531 67 561 3.25e-113 347
MS.gene062088.t1 AT3G47400 39.029 515 281 13 45 534 88 594 3.16e-111 343
MS.gene062088.t1 AT5G49180 36.313 537 301 9 21 530 44 566 2.06e-110 340
MS.gene062088.t1 AT1G53840 36.538 520 291 10 39 528 71 581 2.86e-109 338
MS.gene062088.t1 AT3G59010 43.439 442 220 11 108 534 102 528 3.63e-109 336
MS.gene062088.t1 AT4G03930 43.358 399 214 5 143 534 131 524 1.38e-108 334
MS.gene062088.t1 AT1G11590 41.801 433 237 6 112 534 97 524 1.44e-108 334
MS.gene062088.t1 AT4G33230 36.994 519 295 10 41 534 95 606 1.06e-106 332
MS.gene062088.t1 AT3G10720 52.896 259 122 0 276 534 1 259 1.62e-106 319
MS.gene062088.t1 AT3G27980 43.291 395 216 5 143 534 108 497 2.51e-106 327
MS.gene062088.t1 AT2G26450 36.667 510 300 10 41 534 109 611 1.21e-105 329
MS.gene062088.t1 AT5G20860 36.066 549 311 15 10 534 6 538 1.90e-104 324
MS.gene062088.t1 AT3G06830 36.015 522 296 13 40 530 50 564 4.45e-102 318
MS.gene062088.t1 AT3G14300 36.739 509 287 14 41 523 459 958 6.17e-100 323
MS.gene062088.t1 AT1G11370 53.719 242 112 0 225 466 46 287 5.82e-90 278
MS.gene062088.t1 AT5G09760 35.953 509 292 14 41 522 45 546 4.77e-88 281
MS.gene062088.t1 AT5G09760 35.953 509 292 14 41 522 71 572 6.06e-88 282
MS.gene062088.t1 AT5G64640 34.165 521 304 13 38 527 90 602 1.01e-86 280
MS.gene062088.t1 AT5G20860 33.333 528 284 14 10 513 6 489 5.01e-85 273
MS.gene062088.t1 AT4G15980 44.805 308 169 1 225 531 392 699 5.54e-85 278
MS.gene062088.t1 AT4G15980 44.805 308 169 1 225 531 402 709 9.27e-85 277
MS.gene062088.t1 AT3G62170 42.308 312 176 3 226 534 278 588 1.69e-77 255
MS.gene062088.t1 AT2G47040 43.175 315 171 4 225 534 284 595 3.10e-75 249
MS.gene062088.t1 AT2G47030 41.270 315 177 4 225 534 277 588 2.60e-74 246
MS.gene062088.t1 AT1G05310 36.825 315 178 5 220 524 86 389 1.64e-57 197
MS.gene062088.t1 AT3G29090 37.580 314 170 6 223 523 5 305 2.53e-57 194
MS.gene062088.t1 AT2G36710 36.585 328 188 6 208 528 76 390 3.95e-57 196
MS.gene062088.t1 AT5G19730 37.294 303 165 6 233 524 94 382 2.09e-55 191
MS.gene062088.t1 AT5G47500 32.012 328 190 7 208 523 51 357 2.28e-50 177
MS.gene062088.t1 AT2G36700 34.754 305 182 5 224 523 41 333 5.11e-49 172
MS.gene062088.t1 AT2G21610 35.197 304 174 8 224 524 50 333 7.29e-49 172
MS.gene062088.t1 AT2G21610 35.197 304 174 8 224 524 55 338 7.75e-49 172
MS.gene062088.t1 AT5G55590 34.395 314 180 6 223 524 80 379 2.80e-47 169
MS.gene062088.t1 AT3G17060 32.219 329 197 6 201 523 28 336 6.75e-47 167
MS.gene062088.t1 AT5G07430 32.131 305 189 5 223 523 65 355 5.70e-43 157
MS.gene062088.t1 AT5G55590 34.733 262 147 5 223 472 80 329 9.72e-42 153
MS.gene062088.t1 AT3G24130 31.034 319 194 6 222 529 31 334 1.16e-41 152
MS.gene062088.t1 AT1G44980 43.915 189 100 1 207 389 54 242 1.34e-41 150
MS.gene062088.t1 AT5G18990 33.788 293 167 8 218 498 23 300 3.61e-39 145
MS.gene062088.t1 AT5G07420 30.820 305 193 5 223 523 65 355 1.61e-35 136
MS.gene062088.t1 AT5G61680 29.805 359 220 12 180 523 17 358 2.89e-35 136
MS.gene062088.t1 AT1G69940 29.866 298 188 7 232 523 73 355 6.67e-35 135
MS.gene062088.t1 AT5G07410 29.866 298 188 7 232 523 73 355 1.02e-34 134
MS.gene062088.t1 AT5G26810 32.063 315 183 7 225 523 34 333 2.13e-34 133
MS.gene062088.t1 AT2G19150 29.524 315 201 8 223 530 39 339 6.87e-32 126
MS.gene062088.t1 AT2G19150 32.016 253 153 8 223 468 39 279 6.33e-29 116
MS.gene062088.t1 AT3G49220 31.438 299 167 11 40 313 131 416 2.41e-28 117
MS.gene062088.t1 AT2G47280 28.387 310 194 7 225 523 35 327 2.49e-28 115
MS.gene062088.t1 AT2G47670 30.857 175 109 4 28 191 31 204 7.26e-13 68.2

Find 85 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCTATAATTGAACAATTT+TGG 0.104282 2.3:+45398948 None:intergenic
ATTCTAACCATACTATTATT+TGG 0.153297 2.3:+45400572 None:intergenic
GGGACAATAGATTTCATATT+TGG 0.171421 2.3:-45399091 MS.gene062088:CDS
TATGGTGAATATGAAAATTA+TGG 0.192417 2.3:-45398764 MS.gene062088:CDS
GATGGTCTTGATTCTGCTTC+TGG 0.229635 2.3:-45400842 MS.gene062088:CDS
TGGATTTATGTTTATAGATA+TGG 0.236097 2.3:+45401126 None:intergenic
ATCGCGAATGCGACATTTAC+GGG 0.267997 2.3:-45399111 MS.gene062088:CDS
ATGAGTTGAAACAAAGTTTA+GGG 0.273837 2.3:+45401158 None:intergenic
AATGAGTTGAAACAAAGTTT+AGG 0.277122 2.3:+45401157 None:intergenic
TTTGTTCGAGGAACGGATTC+CGG 0.293719 2.3:+45400928 None:intergenic
CTTTGCTCCAAATAATAGTA+TGG 0.303668 2.3:-45400579 MS.gene062088:CDS
TGCTTATAATTTCAGTGTTT+CGG 0.303923 2.3:-45398678 MS.gene062088:CDS
ACTTTCAGATCTGCAACTTT+AGG 0.311138 2.3:-45400413 MS.gene062088:intron
AGGAGGTAGTTTATGATGTT+TGG 0.318904 2.3:+45401106 None:intergenic
TATCGCGAATGCGACATTTA+CGG 0.340554 2.3:-45399112 MS.gene062088:CDS
AGTGTTTCGGAGTTTATTAT+TGG 0.345661 2.3:-45398665 MS.gene062088:CDS
GATACAACTAGCATTTCATT+TGG 0.363269 2.3:+45400647 None:intergenic
ATAATAGAATTCACAAGAAC+TGG 0.368158 2.3:+45400809 None:intergenic
ACCAAAAGGGTTGGACAAAA+TGG 0.374758 2.3:-45398817 MS.gene062088:CDS
ATGGGTTGGTTATCATTTGA+TGG 0.392958 2.3:-45398711 MS.gene062088:CDS
AGAGAAGGATGATGAGTTTG+TGG 0.407181 2.3:+45401293 None:intergenic
ACCTGAGCCTTCAAATCAAA+AGG 0.410993 2.3:-45400735 MS.gene062088:CDS
GCAACTGCTTGATGTTTCTC+TGG 0.415712 2.3:+45399226 None:intergenic
ATAGTTATTTATGTTAAAGA+AGG 0.415960 2.3:-45400551 MS.gene062088:CDS
GAAATTCCCGTGTCTTCATC+GGG 0.432150 2.3:+45398974 None:intergenic
ACTTCAGTTCCTTATGATGA+TGG 0.435256 2.3:-45398623 MS.gene062088:CDS
AGATTGATAATCGTGTTGAA+TGG 0.440086 2.3:-45398730 MS.gene062088:CDS
AGTTTATTATTGGTGATCAA+TGG 0.440383 2.3:-45398655 MS.gene062088:CDS
GCTTTATTCGAACTCTAGTA+AGG 0.443625 2.3:-45398918 MS.gene062088:CDS
ATGGTCAAATGATCAAGGTT+TGG 0.447423 2.3:-45398798 MS.gene062088:CDS
CCGTTATAACCGCGCAATCA+CGG 0.449430 2.3:-45399003 MS.gene062088:CDS
CGTTATAACCGCGCAATCAC+GGG 0.463595 2.3:-45399002 MS.gene062088:CDS
CCGTGATTGCGCGGTTATAA+CGG 0.474218 2.3:+45399003 None:intergenic
ACAAAATGGTCAAATGATCA+AGG 0.474989 2.3:-45398803 MS.gene062088:CDS
TGAAATTCCCGTGTCTTCAT+CGG 0.478991 2.3:+45398973 None:intergenic
TATCAAATTCCATCATCATA+AGG 0.481002 2.3:+45398614 None:intergenic
TTGAAACAAAGTTTAGGGTA+TGG 0.481564 2.3:+45401163 None:intergenic
GGTATTGAATGTTGCGGTTG+TGG 0.481740 2.3:+45401225 None:intergenic
GTTGTATCTGCAGATGGAAG+TGG 0.497219 2.3:-45400632 MS.gene062088:CDS
ACGGTAAATTGACCAGGTAA+TGG 0.499045 2.3:+45399022 None:intergenic
AGAAGAGGATTGTAAAGAGA+AGG 0.502018 2.3:+45401278 None:intergenic
AGTAAGGTCAAGAGTTACCT+TGG 0.505459 2.3:-45398902 MS.gene062088:CDS
GATTGATAATCGTGTTGAAT+GGG 0.506162 2.3:-45398729 MS.gene062088:CDS
AGGATCAATTCAAGACTGTA+AGG 0.506639 2.3:-45400993 MS.gene062088:CDS
GAAAAGATTAGATAGCTTTG+TGG 0.508755 2.3:+45401054 None:intergenic
TCATTGAAAAGATCGTTATC+CGG 0.521388 2.3:-45400947 MS.gene062088:CDS
AAAACTAACATTGTGATGCT+TGG 0.522551 2.3:-45400494 MS.gene062088:CDS
TAGTTATTTATGTTAAAGAA+GGG 0.523866 2.3:-45400550 MS.gene062088:CDS
GAGGTAATGTGAGTGAGAAG+AGG 0.527927 2.3:+45401263 None:intergenic
TGTTGGTTAGGGCTGCACTT+AGG 0.533033 2.3:+45400879 None:intergenic
GGTAACAGAAGTGTTGTTGA+TGG 0.535416 2.3:-45400443 MS.gene062088:CDS
GTAAGGTCAAGAGTTACCTT+GGG 0.536463 2.3:-45398901 MS.gene062088:CDS
CGATTATCAATCTTTGAACC+AGG 0.546156 2.3:+45398740 None:intergenic
AGAGTTACCTTGGGAGGCCA+TGG 0.549483 2.3:-45398892 MS.gene062088:CDS
TGTTGCGGTTGTGGAAGTGT+TGG 0.552447 2.3:+45401234 None:intergenic
GAGAAGGATGATGAGTTTGT+GGG 0.556118 2.3:+45401294 None:intergenic
ATGTGCAATTTATGGTTACC+AGG 0.561396 2.3:-45399167 MS.gene062088:CDS
TTGCTACTTGAAGTGAATGA+AGG 0.562755 2.3:+45401086 None:intergenic
GATAATCGTGTTGAATGGGT+TGG 0.569200 2.3:-45398725 MS.gene062088:CDS
AACATTGTGATGCTTGGTGA+TGG 0.570666 2.3:-45400488 MS.gene062088:CDS
GATGATGAGTTTGTGGGATG+AGG 0.571867 2.3:+45401300 None:intergenic
TAAAGTTGCAGATCTGAAAG+TGG 0.573525 2.3:+45400415 None:intergenic
CCTGAGCCTTCAAATCAAAA+GGG 0.575156 2.3:-45400734 MS.gene062088:CDS
GGGATTATCCCGTGATTGCG+CGG 0.576666 2.3:+45398994 None:intergenic
ATAGCATTTGAGAACAGAGC+TGG 0.580889 2.3:-45399250 MS.gene062088:CDS
TTACCTTGGGAGGCCATGGA+GGG 0.584141 2.3:-45398888 MS.gene062088:CDS
ACAGAAGTGTTGTTGATGGA+TGG 0.596459 2.3:-45400439 MS.gene062088:CDS
AGTGGACATAAAGTGTGTCC+TGG 0.599538 2.3:+45399149 None:intergenic
ATGCTAGTTGTATCTGCAGA+TGG 0.599555 2.3:-45400638 MS.gene062088:CDS
GTATCAAGAATGCCATTACC+TGG 0.603055 2.3:-45399034 MS.gene062088:CDS
AAACCCTCCATGGCCTCCCA+AGG 0.605902 2.3:+45398885 None:intergenic
GTGGAAGTGTTGGTGTGAAG+AGG 0.607159 2.3:+45401244 None:intergenic
AGTGATTCTACTGTGATCAC+TGG 0.609593 2.3:-45400464 MS.gene062088:CDS
GGATAATCCCGATGAAGACA+CGG 0.612623 2.3:-45398981 MS.gene062088:CDS
GTTACCTTGGGAGGCCATGG+AGG 0.620460 2.3:-45398889 MS.gene062088:CDS
GATAGAATTGTCTAAATGAG+TGG 0.620592 2.3:+45399131 None:intergenic
TATTCGATGTTCCAACGTCG+TGG 0.623832 2.3:+45401032 None:intergenic
AGGTCAAGAGTTACCTTGGG+AGG 0.624790 2.3:-45398898 MS.gene062088:CDS
GATAATCCCGATGAAGACAC+GGG 0.639264 2.3:-45398980 MS.gene062088:CDS
CTACTTGAAGTGAATGAAGG+AGG 0.640651 2.3:+45401089 None:intergenic
GAATATGAAAATTATGGACC+TGG 0.647894 2.3:-45398758 MS.gene062088:CDS
GTTATAACGGTAAATTGACC+AGG 0.666136 2.3:+45399016 None:intergenic
TTTGTTGGTATTGAATGTTG+CGG 0.685307 2.3:+45401219 None:intergenic
GCATTCTTGTAATACTACTG+CGG 0.701105 2.3:+45399063 None:intergenic
AATATCGTAGAGAAACAACG+AGG 0.837126 2.3:-45401013 MS.gene062088:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATAATATGAAAAGA+GGG + chr2.3:45400044-45400063 None:intergenic 10.0%
!! TAAAATTATAATATGAAAAG+AGG + chr2.3:45400045-45400064 None:intergenic 10.0%
!!! CTTTTCATATTATAATTTTA+TGG - chr2.3:45400045-45400064 MS.gene062088:intron 10.0%
!!! TTAAACTAATTCTTAAATTT+TGG - chr2.3:45399959-45399978 MS.gene062088:intron 10.0%
!!! TTTTAAAATTGATTTTGTTT+TGG - chr2.3:45399697-45399716 MS.gene062088:intron 10.0%
!! ATAGTTATTTATGTTAAAGA+AGG - chr2.3:45399372-45399391 MS.gene062088:intron 15.0%
!! TAGTTAAAAAAAATTGTCTT+TGG - chr2.3:45399824-45399843 MS.gene062088:intron 15.0%
!! TAGTTATTTATGTTAAAGAA+GGG - chr2.3:45399373-45399392 MS.gene062088:intron 15.0%
!!! AACACTTATTCTTTTTTAAA+AGG + chr2.3:45399601-45399620 None:intergenic 15.0%
!!! AACATTTTCCTAATTTTATT+TGG - chr2.3:45400240-45400259 MS.gene062088:intron 15.0%
!!! ACATTTTCCTAATTTTATTT+GGG - chr2.3:45400241-45400260 MS.gene062088:intron 15.0%
!!! TAATTCTTAAATTTTGGTTT+AGG - chr2.3:45399965-45399984 MS.gene062088:intron 15.0%
!! AAAAATTTACTTCTCCAAAA+TGG - chr2.3:45399220-45399239 MS.gene062088:CDS 20.0%
!! ACAAATACAATCTTAGAATT+TGG - chr2.3:45400290-45400309 MS.gene062088:intron 20.0%
!! ACATGGTATACTAATTTATT+TGG + chr2.3:45400573-45400592 None:intergenic 20.0%
!! ATTCTAACCATACTATTATT+TGG + chr2.3:45399354-45399373 None:intergenic 20.0%
!! CAAATACAATCTTAGAATTT+GGG - chr2.3:45400291-45400310 MS.gene062088:intron 20.0%
!! CATATAAATTTCTTCATTTC+AGG - chr2.3:45399860-45399879 MS.gene062088:intron 20.0%
!! TATGGTGAATATGAAAATTA+TGG - chr2.3:45401159-45401178 MS.gene062088:CDS 20.0%
!! TGGATTTATGTTTATAGATA+TGG + chr2.3:45398800-45398819 None:intergenic 20.0%
!!! AATATAGATGTTTTATGCTT+AGG - chr2.3:45399740-45399759 MS.gene062088:intron 20.0%
!!! ACAATGTTAGTTTTATAACT+TGG + chr2.3:45399423-45399442 None:intergenic 20.0%
!!! CAAAAGTAAAAGTTTTTTCT+TGG + chr2.3:45400188-45400207 None:intergenic 20.0%
!!! CAAGAAAAAACTTTTACTTT+TGG - chr2.3:45400186-45400205 MS.gene062088:intron 20.0%
!!! CATTTTCCTAATTTTATTTG+GGG - chr2.3:45400242-45400261 MS.gene062088:intron 20.0%
!!! TAGCTATAATTGAACAATTT+TGG + chr2.3:45400978-45400997 None:intergenic 20.0%
!!! TGTTTTGCATAAAGATTTTA+AGG + chr2.3:45398737-45398756 None:intergenic 20.0%
!!! TTTTACAAATGTGCAATTTA+TGG - chr2.3:45400748-45400767 MS.gene062088:CDS 20.0%
! AAAAGACAAACCAAGAAAAA+AGG + chr2.3:45399552-45399571 None:intergenic 25.0%
! AAAGACAAACCAAGAAAAAA+GGG + chr2.3:45399551-45399570 None:intergenic 25.0%
! AACAAAAACACATGTTTAGA+TGG - chr2.3:45399063-45399082 MS.gene062088:CDS 25.0%
! ACTAATTTCATACTATGGAT+TGG - chr2.3:45400473-45400492 MS.gene062088:CDS 25.0%
! ACTTACCATCAAATAAAGAT+TGG + chr2.3:45399785-45399804 None:intergenic 25.0%
! ATAATAGAATTCACAAGAAC+TGG + chr2.3:45399117-45399136 None:intergenic 25.0%
! CTTACCATCAAATAAAGATT+GGG + chr2.3:45399784-45399803 None:intergenic 25.0%
! GAGTAACTAATTTCATACTA+TGG - chr2.3:45400468-45400487 MS.gene062088:CDS 25.0%
! GTTAATCCCCAAATAAAATT+AGG + chr2.3:45400251-45400270 None:intergenic 25.0%
! TCAATAATAATGTTCACAAC+TGG - chr2.3:45400420-45400439 MS.gene062088:CDS 25.0%
! TGCTTATAATTTCAGTGTTT+CGG - chr2.3:45401245-45401264 MS.gene062088:CDS 25.0%
!! AAAGTTGGATTTTTGTCATT+TGG - chr2.3:45400509-45400528 MS.gene062088:CDS 25.0%
!! AATATGAAAAGAGGGTATAT+TGG + chr2.3:45400036-45400055 None:intergenic 25.0%
!! AATCTTTATTTGATGGTAAG+TGG - chr2.3:45399784-45399803 MS.gene062088:intron 25.0%
!! AATGAGTTGAAACAAAGTTT+AGG + chr2.3:45398769-45398788 None:intergenic 25.0%
!! AGTTTATTATTGGTGATCAA+TGG - chr2.3:45401268-45401287 MS.gene062088:CDS 25.0%
!! ATGAGTTGAAACAAAGTTTA+GGG + chr2.3:45398768-45398787 None:intergenic 25.0%
!! CATCCTTTATTAACCTTTTT+CGG - chr2.3:45400362-45400381 MS.gene062088:intron 25.0%
!! GATGATTTTATTGACCAAAA+GGG - chr2.3:45401093-45401112 MS.gene062088:CDS 25.0%
!! GTTGTTATCTCTTTTCAATT+TGG - chr2.3:45400384-45400403 MS.gene062088:intron 25.0%
!! TGATGATTTTATTGACCAAA+AGG - chr2.3:45401092-45401111 MS.gene062088:CDS 25.0%
!! TTTTCTTTACCCTTTTTTCT+TGG - chr2.3:45399539-45399558 MS.gene062088:intron 25.0%
!! TTTTGGTCAAACATTATTTC+AGG - chr2.3:45399891-45399910 MS.gene062088:intron 25.0%
!!! AAAATGTTAATTTGTGACCT+TGG + chr2.3:45400228-45400247 None:intergenic 25.0%
!!! AAATGTTAATTTGTGACCTT+GGG + chr2.3:45400227-45400246 None:intergenic 25.0%
!!! AAGCTTTTTGATAACCATTT+TGG + chr2.3:45399237-45399256 None:intergenic 25.0%
!!! AAGTTGGATTTTTGTCATTT+GGG - chr2.3:45400510-45400529 MS.gene062088:CDS 25.0%
!!! ATCTAAACATGTGTTTTTGT+TGG + chr2.3:45399064-45399083 None:intergenic 25.0%
AAAACTAACATTGTGATGCT+TGG - chr2.3:45399429-45399448 MS.gene062088:intron 30.0%
AAAGAGATAACAACCGAAAA+AGG + chr2.3:45400378-45400397 None:intergenic 30.0%
ACAAAATGGTCAAATGATCA+AGG - chr2.3:45401120-45401139 MS.gene062088:CDS 30.0%
AGTGTTTCGGAGTTTATTAT+TGG - chr2.3:45401258-45401277 MS.gene062088:CDS 30.0%
CAACCGAAAAAGGTTAATAA+AGG + chr2.3:45400368-45400387 None:intergenic 30.0%
CTTTGCTCCAAATAATAGTA+TGG - chr2.3:45399344-45399363 MS.gene062088:intron 30.0%
GAATATGAAAATTATGGACC+TGG - chr2.3:45401165-45401184 MS.gene062088:CDS 30.0%
GATACAACTAGCATTTCATT+TGG + chr2.3:45399279-45399298 None:intergenic 30.0%
GATAGAATTGTCTAAATGAG+TGG + chr2.3:45400795-45400814 None:intergenic 30.0%
GGGACAATAGATTTCATATT+TGG - chr2.3:45400832-45400851 MS.gene062088:CDS 30.0%
GGTGACATTACAATAAAAGT+TGG - chr2.3:45400494-45400513 MS.gene062088:CDS 30.0%
TATTTGTGTCTATCCAAGAT+AGG + chr2.3:45400277-45400296 None:intergenic 30.0%
TCATTGAAAAGATCGTTATC+CGG - chr2.3:45398976-45398995 MS.gene062088:CDS 30.0%
TGACTTTCAATTTGGAAACA+TGG + chr2.3:45400590-45400609 None:intergenic 30.0%
TTACCATGTGACTTTCAATT+TGG + chr2.3:45400598-45400617 None:intergenic 30.0%
TTTCCAAATTGAAAGTCACA+TGG - chr2.3:45400592-45400611 MS.gene062088:CDS 30.0%
! AGATTGATAATCGTGTTGAA+TGG - chr2.3:45401193-45401212 MS.gene062088:CDS 30.0%
! ATCTCTTTTCAATTTGGACT+TGG - chr2.3:45400390-45400409 MS.gene062088:intron 30.0%
! ATTTTATTGACCAAAAGGGT+TGG - chr2.3:45401097-45401116 MS.gene062088:CDS 30.0%
! CGATCTTTTCAATGAAGTTA+AGG + chr2.3:45398971-45398990 None:intergenic 30.0%
! GAAAAGATTAGATAGCTTTG+TGG + chr2.3:45398872-45398891 None:intergenic 30.0%
! GATTGATAATCGTGTTGAAT+GGG - chr2.3:45401194-45401213 MS.gene062088:CDS 30.0%
! GTTTCCCAATCTTTATTTGA+TGG - chr2.3:45399777-45399796 MS.gene062088:intron 30.0%
! TTGAAACAAAGTTTAGGGTA+TGG + chr2.3:45398763-45398782 None:intergenic 30.0%
! TTTGTTGGTATTGAATGTTG+CGG + chr2.3:45398707-45398726 None:intergenic 30.0%
!! AACATGTGTTTTTGTTGGTT+AGG + chr2.3:45399059-45399078 None:intergenic 30.0%
!! AATGTTAATTTGTGACCTTG+GGG + chr2.3:45400226-45400245 None:intergenic 30.0%
!! ACATGTGTTTTTGTTGGTTA+GGG + chr2.3:45399058-45399077 None:intergenic 30.0%
!! GGTTTGGATACATTGTTTTA+TGG - chr2.3:45401141-45401160 MS.gene062088:CDS 30.0%
!! TTTCATTTTTCAGCTGTATC+TGG - chr2.3:45400628-45400647 MS.gene062088:CDS 30.0%
!! TTTGGTTTAGGTTTTTCACA+AGG - chr2.3:45399977-45399996 MS.gene062088:intron 30.0%
!! TTTTAAGGAAGTGAGTTTGT+TGG + chr2.3:45398722-45398741 None:intergenic 30.0%
!!! CATTTCAGGCTAATTTGTTT+TGG - chr2.3:45399874-45399893 MS.gene062088:intron 30.0%
!!! TTGTAACCCTTTTGATTTGA+AGG + chr2.3:45399198-45399217 None:intergenic 30.0%
AATATCGTAGAGAAACAACG+AGG - chr2.3:45398910-45398929 MS.gene062088:CDS 35.0%
ACTTCAGTTCCTTATGATGA+TGG - chr2.3:45401300-45401319 MS.gene062088:CDS 35.0%
ACTTTCAGATCTGCAACTTT+AGG - chr2.3:45399510-45399529 MS.gene062088:intron 35.0%
AGAAGAGGATTGTAAAGAGA+AGG + chr2.3:45398648-45398667 None:intergenic 35.0%
AGGAGGTAGTTTATGATGTT+TGG + chr2.3:45398820-45398839 None:intergenic 35.0%
AGGATCAATTCAAGACTGTA+AGG - chr2.3:45398930-45398949 MS.gene062088:CDS 35.0%
ATGGTCAAATGATCAAGGTT+TGG - chr2.3:45401125-45401144 MS.gene062088:CDS 35.0%
ATGTGCAATTTATGGTTACC+AGG - chr2.3:45400756-45400775 MS.gene062088:CDS 35.0%
CGATTATCAATCTTTGAACC+AGG + chr2.3:45401186-45401205 None:intergenic 35.0%
GCATTCTTGTAATACTACTG+CGG + chr2.3:45400863-45400882 None:intergenic 35.0%
GTTATAACGGTAAATTGACC+AGG + chr2.3:45400910-45400929 None:intergenic 35.0%
TAAAGTTGCAGATCTGAAAG+TGG + chr2.3:45399511-45399530 None:intergenic 35.0%
! AGCTATGTTTCTTTTGTTCG+AGG + chr2.3:45399010-45399029 None:intergenic 35.0%
! GCTTTATTCGAACTCTAGTA+AGG - chr2.3:45401005-45401024 MS.gene062088:CDS 35.0%
! TGTTTCTTTTGTTCGAGGAA+CGG + chr2.3:45399005-45399024 None:intergenic 35.0%
! TTGCTACTTGAAGTGAATGA+AGG + chr2.3:45398840-45398859 None:intergenic 35.0%
!! ATGGGTTGGTTATCATTTGA+TGG - chr2.3:45401212-45401231 MS.gene062088:CDS 35.0%
!! TGGTTTGTCTTTTACTCTCT+TGG - chr2.3:45399559-45399578 MS.gene062088:intron 35.0%
ACCAAAAGGGTTGGACAAAA+TGG - chr2.3:45401106-45401125 MS.gene062088:CDS 40.0%
ACCTGAGCCTTCAAATCAAA+AGG - chr2.3:45399188-45399207 MS.gene062088:CDS 40.0%
ACGGTAAATTGACCAGGTAA+TGG + chr2.3:45400904-45400923 None:intergenic 40.0%
AGAGAAGGATGATGAGTTTG+TGG + chr2.3:45398633-45398652 None:intergenic 40.0%
AGTAAGGTCAAGAGTTACCT+TGG - chr2.3:45401021-45401040 MS.gene062088:CDS 40.0%
AGTGATTCTACTGTGATCAC+TGG - chr2.3:45399459-45399478 MS.gene062088:intron 40.0%
ATAGCATTTGAGAACAGAGC+TGG - chr2.3:45400673-45400692 MS.gene062088:CDS 40.0%
ATGCTAGTTGTATCTGCAGA+TGG - chr2.3:45399285-45399304 MS.gene062088:CDS 40.0%
CCTGAGCCTTCAAATCAAAA+GGG - chr2.3:45399189-45399208 MS.gene062088:CDS 40.0%
CTACTTGAAGTGAATGAAGG+AGG + chr2.3:45398837-45398856 None:intergenic 40.0%
GAATCTGACTCACTGAACAA+TGG + chr2.3:45400541-45400560 None:intergenic 40.0%
GAGAAGGATGATGAGTTTGT+GGG + chr2.3:45398632-45398651 None:intergenic 40.0%
GATAATCGTGTTGAATGGGT+TGG - chr2.3:45401198-45401217 MS.gene062088:CDS 40.0%
GTAAGGTCAAGAGTTACCTT+GGG - chr2.3:45401022-45401041 MS.gene062088:CDS 40.0%
GTATCAAGAATGCCATTACC+TGG - chr2.3:45400889-45400908 MS.gene062088:CDS 40.0%
TATCGCGAATGCGACATTTA+CGG - chr2.3:45400811-45400830 MS.gene062088:CDS 40.0%
TGAAATTCCCGTGTCTTCAT+CGG + chr2.3:45400953-45400972 None:intergenic 40.0%
! AACATTGTGATGCTTGGTGA+TGG - chr2.3:45399435-45399454 MS.gene062088:intron 40.0%
! ACCATTTTGTCCAACCCTTT+TGG + chr2.3:45401110-45401129 None:intergenic 40.0%
! TCTAATCTTTTCCACGACGT+TGG - chr2.3:45398880-45398899 MS.gene062088:CDS 40.0%
! TTTTCAGCTGTATCTGGAGA+TGG - chr2.3:45400634-45400653 MS.gene062088:CDS 40.0%
!! ACAGAAGTGTTGTTGATGGA+TGG - chr2.3:45399484-45399503 MS.gene062088:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - chr2.3:45400070-45400089 MS.gene062088:intron 40.0%
!! GGTAACAGAAGTGTTGTTGA+TGG - chr2.3:45399480-45399499 MS.gene062088:intron 40.0%
!! GTTCTAGAAAAAACCCTCCA+TGG + chr2.3:45401051-45401070 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - chr2.3:45400069-45400088 MS.gene062088:intron 40.0%
!! TTCCTTAACTTGTGCCCTAA+GGG + chr2.3:45400087-45400106 None:intergenic 40.0%
AGTGGACATAAAGTGTGTCC+TGG + chr2.3:45400777-45400796 None:intergenic 45.0%
ATCGCGAATGCGACATTTAC+GGG - chr2.3:45400812-45400831 MS.gene062088:CDS 45.0%
GAAATTCCCGTGTCTTCATC+GGG + chr2.3:45400952-45400971 None:intergenic 45.0%
GAGGTAATGTGAGTGAGAAG+AGG + chr2.3:45398663-45398682 None:intergenic 45.0%
GATAATCCCGATGAAGACAC+GGG - chr2.3:45400943-45400962 MS.gene062088:CDS 45.0%
GATGATGAGTTTGTGGGATG+AGG + chr2.3:45398626-45398645 None:intergenic 45.0%
GCAACTGCTTGATGTTTCTC+TGG + chr2.3:45400700-45400719 None:intergenic 45.0%
GGATAATCCCGATGAAGACA+CGG - chr2.3:45400942-45400961 MS.gene062088:CDS 45.0%
GGGGATTAACTCACCTATCT+TGG - chr2.3:45400261-45400280 MS.gene062088:intron 45.0%
GTTCCTTAACTTATGCCCCA+AGG - chr2.3:45400208-45400227 MS.gene062088:intron 45.0%
GTTGTATCTGCAGATGGAAG+TGG - chr2.3:45399291-45399310 MS.gene062088:intron 45.0%
TATTCGATGTTCCAACGTCG+TGG + chr2.3:45398894-45398913 None:intergenic 45.0%
TGACCTTGGGGCATAAGTTA+AGG + chr2.3:45400214-45400233 None:intergenic 45.0%
! GATGGTCTTGATTCTGCTTC+TGG - chr2.3:45399081-45399100 MS.gene062088:CDS 45.0%
! GGTATTGAATGTTGCGGTTG+TGG + chr2.3:45398701-45398720 None:intergenic 45.0%
! TTTGTTCGAGGAACGGATTC+CGG + chr2.3:45398998-45399017 None:intergenic 45.0%
!! GTTCCTTAACTTGTGCCCTA+AGG + chr2.3:45400088-45400107 None:intergenic 45.0%
!!! CCCTTTTGATTTGAAGGCTC+AGG + chr2.3:45399192-45399211 None:intergenic 45.0%
!!! TTTTCATATTATAATTTTAT+GGG - chr2.3:45400046-45400065 MS.gene062088:intron 5.0%
AGGTCAAGAGTTACCTTGGG+AGG - chr2.3:45401025-45401044 MS.gene062088:CDS 50.0%
CCGTGATTGCGCGGTTATAA+CGG + chr2.3:45400923-45400942 None:intergenic 50.0%
CCGTTATAACCGCGCAATCA+CGG - chr2.3:45400920-45400939 MS.gene062088:CDS 50.0%
CGTTATAACCGCGCAATCAC+GGG - chr2.3:45400921-45400940 MS.gene062088:CDS 50.0%
TGCCCTTAGGGCACAAGTTA+AGG - chr2.3:45400082-45400101 MS.gene062088:intron 50.0%
! TGTTGCGGTTGTGGAAGTGT+TGG + chr2.3:45398692-45398711 None:intergenic 50.0%
! TGTTGGTTAGGGCTGCACTT+AGG + chr2.3:45399047-45399066 None:intergenic 50.0%
!! GTGGAAGTGTTGGTGTGAAG+AGG + chr2.3:45398682-45398701 None:intergenic 50.0%
AGAGTTACCTTGGGAGGCCA+TGG - chr2.3:45401031-45401050 MS.gene062088:CDS 55.0%
GGGATTATCCCGTGATTGCG+CGG + chr2.3:45400932-45400951 None:intergenic 55.0%
TTACCTTGGGAGGCCATGGA+GGG - chr2.3:45401035-45401054 MS.gene062088:CDS 55.0%
AAACCCTCCATGGCCTCCCA+AGG + chr2.3:45401041-45401060 None:intergenic 60.0%
GTTACCTTGGGAGGCCATGG+AGG - chr2.3:45401034-45401053 MS.gene062088:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 45398616 45401329 45398616 ID=MS.gene062088
chr2.3 mRNA 45398616 45401329 45398616 ID=MS.gene062088.t1;Parent=MS.gene062088
chr2.3 exon 45400414 45401329 45400414 ID=MS.gene062088.t1.exon1;Parent=MS.gene062088.t1
chr2.3 CDS 45400414 45401329 45400414 ID=cds.MS.gene062088.t1;Parent=MS.gene062088.t1
chr2.3 exon 45398616 45399304 45398616 ID=MS.gene062088.t1.exon2;Parent=MS.gene062088.t1
chr2.3 CDS 45398616 45399304 45398616 ID=cds.MS.gene062088.t1;Parent=MS.gene062088.t1
Gene Sequence

>MS.gene062088

ATGGCTTCCTCATCCCACAAACTCATCATCCTTCTCTTTACAATCCTCTTCTCACTCACATTACCTCTTCACACCAACACTTCCACAACCGCAACATTCAATACCAACAAACTCACTTCCTTAAAATCTTTATGCAAAACAACACCATACCCTAAACTTTGTTTCAACTCATTAAAACTTTCCATATCTATAAACATAAATCCAAACATCATAAACTACCTCCTTCATTCACTTCAAGTAGCAATATTCGAAACCACAAAGCTATCTAATCTTTTCCACGACGTTGGAACATCGAATATCGTAGAGAAACAACGAGGATCAATTCAAGACTGTAAGGAACTTCATCAATCAACCTTAACTTCATTGAAAAGATCGTTATCCGGAATCCGTTCCTCGAACAAAAGAAACATAGCTGATGCTAGAATCTACCTAAGTGCAGCCCTAACCAACAAAAACACATGTTTAGATGGTCTTGATTCTGCTTCTGGTACATATAAACCAGTTCTTGTGAATTCTATTATCAACACTTACAAACATGTAAGTAACTCTCTTTCTATGCTTTCTAATCATGCACCTGAGCCTTCAAATCAAAAGGGTTACAAGAAAAAATTTACTTCTCCAAAATGGTTATCAAAAAGCTTAGATTTTGATGAATATGATCCAAATGAAATGCTAGTTGTATCTGCAGATGGAAGTGGAAACTTTAGCACTATTAATGATGCTATAAACTTTGCTCCAAATAATAGTATGGTTAGAATAGTTATTTATGTTAAAGAAGGGTATTATGATGAAAATGTTGAAATACCAAGTTATAAAACTAACATTGTGATGCTTGGTGATGGAAGTGATTCTACTGTGATCACTGGTAACAGAAGTGTTGTTGATGGATGGACCACTTTCAGATCTGCAACTTTAGGTGAAGTTTTTCTTTACCCTTTTTTCTTGGTTTGTCTTTTACTCTCTTGGATTTTTCTGTGCTTTGCCTTTTAAAAAAGAATAAGTGTTGCTGATGCAATAGATTCTACAATATTAAATTAAATTTGTCAATGAACTAATTATAGTGTGTTTGATTTCACAAGAGTTTTAAAATTGATTTTGTTTTGGATCTTATGTGATTTTAACAAAATATAGATGTTTTATGCTTAGGACAGAAATCATTTTGTTTCCCAATCTTTATTTGATGGTAAGTGGTAAAATTAATTTGTGTCTAGTTAAAAAAAATTGTCTTTGGAACATAAAATCAACATATAAATTTCTTCATTTCAGGCTAATTTGTTTTGGTCAAACATTATTTCAGGCTAACTTTATTCAAATCAATTTCAATGAAATTATTATTATTTTTTTTAAACTAATTCTTAAATTTTGGTTTAGGTTTTTCACAAGGTTGATCTCTTTTTAATGTGAGATTTGAGTTTTTCCAATATACCCTCTTTTCATATTATAATTTTATGGGTCATGTTAACTTGTGCCCTTAGGGCACAAGTTAAGGAACTTAAAATAGAAATAAGTAATAAATTTTATGTTGAAAATATAACTTTTGAAACTTTCAAGACATTAAATGCACAATTTCCAAGAAAAAACTTTTACTTTTGGTTCCTTAACTTATGCCCCAAGGTCACAAATTAACATTTTCCTAATTTTATTTGGGGATTAACTCACCTATCTTGGATAGACACAAATACAATCTTAGAATTTGGGTTGTGTTCAGCGCAACGCTAAAGAATCAATTCGTAACACGAGAAATGTCATCCTTTATTAACCTTTTTCGGTTGTTATCTCTTTTCAATTTGGACTTGGATTTTTATCAATAATAATGTTCACAACTGGTTAAAAAAAAAAAACTAAAGATTATGAGTAACTAATTTCATACTATGGATTGGTGACATTACAATAAAAGTTGGATTTTTGTCATTTGGGATAATCCATTGTTCAGTGAGTCAGATTCTTAATTTTTCCAAATAAATTAGTATACCATGTTTCCAAATTGAAAGTCACATGGTAATAAATGCTCATTTCATTTTTCAGCTGTATCTGGAGATGGATTTCTTGCAAGAAACATAGCATTTGAGAACAGAGCTGGACCAGAGAAACATCAAGCAGTTGCATTAAGAGTAAATGCAGATTTAACAGCATTTTACAAATGTGCAATTTATGGTTACCAGGACACACTTTATGTCCACTCATTTAGACAATTCTATCGCGAATGCGACATTTACGGGACAATAGATTTCATATTTGGTAACGCCGCAGTAGTATTACAAGAATGCGACATCGTATCAAGAATGCCATTACCTGGTCAATTTACCGTTATAACCGCGCAATCACGGGATAATCCCGATGAAGACACGGGAATTTCAATCCAAAATTGTTCAATTATAGCTACGAACGAGCTTTATTCGAACTCTAGTAAGGTCAAGAGTTACCTTGGGAGGCCATGGAGGGTTTTTTCTAGAACTGTTTTTATTGAGTCTTATATTGATGATTTTATTGACCAAAAGGGTTGGACAAAATGGTCAAATGATCAAGGTTTGGATACATTGTTTTATGGTGAATATGAAAATTATGGACCTGGTTCAAAGATTGATAATCGTGTTGAATGGGTTGGTTATCATTTGATGGATTATAATGATGCTTATAATTTCAGTGTTTCGGAGTTTATTATTGGTGATCAATGGCTTGAGTCTACTTCAGTTCCTTATGATGATGGAATTTGA
Protein sequence

>MS.gene062088.t1

MASSSHKLIILLFTILFSLTLPLHTNTSTTATFNTNKLTSLKSLCKTTPYPKLCFNSLKLSISININPNIINYLLHSLQVAIFETTKLSNLFHDVGTSNIVEKQRGSIQDCKELHQSTLTSLKRSLSGIRSSNKRNIADARIYLSAALTNKNTCLDGLDSASGTYKPVLVNSIINTYKHVSNSLSMLSNHAPEPSNQKGYKKKFTSPKWLSKSLDFDEYDPNEMLVVSADGSGNFSTINDAINFAPNNSMVRIVIYVKEGYYDENVEIPSYKTNIVMLGDGSDSTVITGNRSVVDGWTTFRSATLAVSGDGFLARNIAFENRAGPEKHQAVALRVNADLTAFYKCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQECDIVSRMPLPGQFTVITAQSRDNPDEDTGISIQNCSIIATNELYSNSSKVKSYLGRPWRVFSRTVFIESYIDDFIDQKGWTKWSNDQGLDTLFYGEYENYGPGSKIDNRVEWVGYHLMDYNDAYNFSVSEFIIGDQWLESTSVPYDDGI