AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07232

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07232.t1 MTR_1g088020 95.683 556 24 0 1 556 1 556 0.0 1087
MS.gene07232.t1 MTR_1g088225 94.964 556 26 1 1 556 1 554 0.0 1075
MS.gene07232.t1 MTR_1g054880 87.522 561 63 2 1 556 1 559 0.0 999
MS.gene07232.t1 MTR_0458s0010 81.655 556 65 4 1 556 1 519 0.0 885
MS.gene07232.t1 MTR_7g108890 75.564 532 127 2 26 556 34 563 0.0 851
MS.gene07232.t1 MTR_7g108875 66.229 533 175 3 26 556 36 565 0.0 743
MS.gene07232.t1 MTR_7g108900 65.595 529 175 5 26 551 32 556 0.0 719
MS.gene07232.t1 MTR_0458s0030 98.113 265 5 0 292 556 51 315 0.0 548
MS.gene07232.t1 MTR_0458s0030 80.392 51 10 0 1 51 1 51 1.95e-21 95.5
MS.gene07232.t1 MTR_1g088040 98.113 265 5 0 292 556 51 315 0.0 548
MS.gene07232.t1 MTR_1g088040 80.392 51 10 0 1 51 1 51 1.95e-21 95.5
MS.gene07232.t1 MTR_1g083520 50.912 548 235 9 12 555 11 528 0.0 529
MS.gene07232.t1 MTR_3g010770 47.417 542 264 7 32 556 39 576 3.71e-171 497
MS.gene07232.t1 MTR_8g042910 47.495 539 264 7 32 555 78 612 5.36e-170 495
MS.gene07232.t1 MTR_7g108905 50.625 480 206 9 77 551 99 552 4.11e-153 450
MS.gene07232.t1 MTR_4g025690 44.583 563 246 15 8 555 2 513 2.64e-142 421
MS.gene07232.t1 MTR_4g025730 46.429 532 222 16 32 555 33 509 3.77e-140 415
MS.gene07232.t1 MTR_8g023310 44.359 523 224 10 51 555 116 589 6.35e-133 399
MS.gene07232.t1 MTR_4g124520 46.868 431 195 7 127 555 123 521 9.05e-133 397
MS.gene07232.t1 MTR_2g044880 45.253 495 216 11 73 555 74 525 1.19e-132 397
MS.gene07232.t1 MTR_4g087980 46.186 472 212 8 88 555 83 516 1.72e-132 396
MS.gene07232.t1 MTR_2g044810 39.437 568 288 9 5 555 6 534 9.51e-132 395
MS.gene07232.t1 MTR_8g104655 42.599 554 282 12 8 555 18 541 2.17e-131 394
MS.gene07232.t1 MTR_1g008140 41.882 542 277 10 32 555 86 607 7.85e-130 392
MS.gene07232.t1 MTR_8g104645 55.422 332 144 3 225 555 44 372 3.35e-129 382
MS.gene07232.t1 MTR_4g087970 45.532 470 216 10 91 555 83 517 5.16e-129 387
MS.gene07232.t1 MTR_3g010780 45.299 468 226 11 88 555 137 574 5.18e-129 389
MS.gene07232.t1 MTR_8g042900 45.798 476 220 12 84 555 140 581 7.20e-129 389
MS.gene07232.t1 MTR_4g025670 44.444 477 217 8 83 555 57 489 8.09e-128 383
MS.gene07232.t1 MTR_7g112580 44.111 467 229 9 91 555 106 542 1.19e-127 384
MS.gene07232.t1 MTR_7g050980 44.421 475 213 11 91 555 122 555 4.01e-126 381
MS.gene07232.t1 MTR_7g050870 44.609 473 215 11 91 555 121 554 1.25e-125 380
MS.gene07232.t1 MTR_3g091380 41.929 539 275 11 32 555 82 597 4.32e-124 377
MS.gene07232.t1 MTR_7g050950 40.111 541 267 14 31 555 54 553 5.35e-122 370
MS.gene07232.t1 MTR_4g035980 39.777 538 281 11 23 555 40 539 2.94e-120 365
MS.gene07232.t1 MTR_3g033690 39.703 539 262 12 32 555 36 526 3.49e-118 360
MS.gene07232.t1 MTR_3g008720 39.479 537 267 12 32 555 36 527 2.53e-117 357
MS.gene07232.t1 MTR_3g008640 39.153 567 283 14 8 555 4 527 1.17e-116 355
MS.gene07232.t1 MTR_4g124550 41.277 470 249 7 91 555 146 593 4.29e-116 356
MS.gene07232.t1 MTR_3g008700 39.065 535 272 11 32 555 36 527 5.61e-116 354
MS.gene07232.t1 MTR_7g053360 38.556 568 285 15 8 555 4 527 4.62e-115 352
MS.gene07232.t1 MTR_8g023150 40.592 473 245 10 90 555 139 582 3.63e-107 333
MS.gene07232.t1 MTR_1g086210 38.046 481 263 7 91 555 108 569 1.44e-106 331
MS.gene07232.t1 MTR_2g044810 58.233 249 104 0 307 555 217 465 9.78e-106 325
MS.gene07232.t1 MTR_7g112590 34.657 554 320 11 21 554 51 582 1.28e-101 319
MS.gene07232.t1 MTR_1g086190 34.953 535 316 8 31 555 51 563 2.33e-101 317
MS.gene07232.t1 MTR_8g104580 36.957 552 283 13 8 555 10 500 3.77e-101 315
MS.gene07232.t1 MTR_1g083510 37.945 477 269 10 91 554 120 582 1.37e-99 313
MS.gene07232.t1 MTR_0618s0020 60.088 228 90 1 329 555 1 228 2.03e-98 298
MS.gene07232.t1 MTR_2g044660 50.160 313 149 3 243 555 327 632 7.80e-98 310
MS.gene07232.t1 MTR_1g083470 36.831 467 265 8 91 551 124 566 1.84e-96 305
MS.gene07232.t1 MTR_1g083500 36.831 467 265 8 91 551 124 566 1.84e-96 305
MS.gene07232.t1 MTR_7g110560 33.818 550 326 13 17 556 29 550 1.47e-94 299
MS.gene07232.t1 MTR_1g083490 33.948 542 322 12 21 551 55 571 1.54e-94 300
MS.gene07232.t1 MTR_4g005170 36.207 464 272 7 91 551 129 571 9.12e-94 300
MS.gene07232.t1 MTR_8g093460 47.468 316 154 5 238 544 228 540 1.03e-93 297
MS.gene07232.t1 MTR_4g005180 33.579 542 324 12 21 551 37 553 1.12e-92 295
MS.gene07232.t1 MTR_3g095920 36.688 477 253 10 98 554 116 563 1.45e-90 289
MS.gene07232.t1 MTR_7g110490 36.688 477 276 8 88 550 105 569 4.79e-90 288
MS.gene07232.t1 MTR_7g110510 36.688 477 276 8 88 550 105 569 4.79e-90 288
MS.gene07232.t1 MTR_7g110440 35.699 479 282 8 91 555 108 574 1.13e-88 285
MS.gene07232.t1 MTR_4g120280 37.162 444 238 11 125 554 155 571 1.59e-88 285
MS.gene07232.t1 MTR_4g120290 36.343 443 243 10 125 554 155 571 3.91e-86 278
MS.gene07232.t1 MTR_2g436040 35.880 432 240 8 127 552 143 543 5.61e-84 273
MS.gene07232.t1 MTR_5g083620 41.009 317 175 5 244 555 47 356 1.04e-79 254
MS.gene07232.t1 MTR_8g088610 40.181 331 184 6 225 552 54 373 5.71e-79 253
MS.gene07232.t1 MTR_2g436050 32.453 530 314 10 35 554 68 563 3.23e-77 254
MS.gene07232.t1 MTR_7g110420 32.207 503 279 11 91 555 108 586 7.92e-74 246
MS.gene07232.t1 MTR_7g107180 41.587 315 168 6 243 555 7 307 3.75e-72 233
MS.gene07232.t1 MTR_2g105560 39.365 315 173 6 243 555 41 339 1.15e-70 230
MS.gene07232.t1 MTR_7g110430 32.848 481 259 11 91 555 108 540 5.95e-70 234
MS.gene07232.t1 MTR_7g111560 28.755 546 316 14 30 554 62 555 1.22e-67 229
MS.gene07232.t1 MTR_6g012800 34.954 329 180 10 242 553 5 316 1.03e-52 182
MS.gene07232.t1 MTR_1g086540 33.613 357 202 9 199 544 12 344 1.03e-52 183
MS.gene07232.t1 MTR_6g088810 35.738 305 168 7 251 544 90 377 1.68e-50 178
MS.gene07232.t1 MTR_6g024165 35.873 315 170 11 242 544 40 334 1.87e-50 177
MS.gene07232.t1 MTR_7g011530 33.537 328 186 9 242 553 5 316 3.50e-49 173
MS.gene07232.t1 MTR_8g102380 34.076 314 177 7 244 544 81 377 5.11e-49 174
MS.gene07232.t1 MTR_6g042660 33.030 330 182 10 221 544 25 321 8.11e-49 172
MS.gene07232.t1 MTR_7g092780 33.333 312 184 6 243 544 90 387 1.52e-46 168
MS.gene07232.t1 MTR_2g039530 39.032 310 148 11 225 523 40 319 2.39e-46 166
MS.gene07232.t1 MTR_1g033050 33.333 315 177 7 242 548 17 306 6.97e-43 155
MS.gene07232.t1 MTR_2g033970 32.051 312 183 7 243 545 56 347 8.27e-43 156
MS.gene07232.t1 MTR_4g124740 32.268 313 176 9 242 544 53 339 1.03e-42 156
MS.gene07232.t1 MTR_7g102600 30.233 344 208 9 209 544 74 393 7.26e-42 155
MS.gene07232.t1 MTR_5g095490 33.117 308 177 7 249 544 67 357 1.58e-41 153
MS.gene07232.t1 MTR_8g102380 35.496 262 140 7 244 492 81 326 5.71e-41 151
MS.gene07232.t1 MTR_5g012600 31.132 318 190 7 242 547 62 362 6.57e-41 152
MS.gene07232.t1 MTR_6g042690 32.803 314 175 10 243 544 39 328 8.97e-41 150
MS.gene07232.t1 MTR_5g083590 29.747 316 167 6 243 556 7 269 1.06e-40 149
MS.gene07232.t1 MTR_5g093970 32.903 310 185 7 239 544 39 329 7.54e-39 145
MS.gene07232.t1 MTR_5g088300 33.550 307 180 8 239 544 33 316 3.95e-38 143
MS.gene07232.t1 MTR_2g436600 30.671 313 177 10 243 545 55 337 5.23e-37 140
MS.gene07232.t1 MTR_4g051810 30.945 307 191 6 238 544 32 317 1.28e-34 133
MS.gene07232.t1 MTR_5g088290 30.293 307 191 7 239 544 44 328 7.72e-34 131
MS.gene07232.t1 MTR_5g088280 30.293 307 190 7 239 544 35 318 3.83e-31 124
MS.gene07232.t1 MTR_8g036225 30.408 319 178 10 242 544 32 322 2.58e-30 121
MS.gene07232.t1 MTR_4g074290 29.355 310 198 7 240 544 68 361 2.40e-29 119
MS.gene07232.t1 MTR_2g073390 28.939 311 194 9 242 544 70 361 2.18e-27 114
MS.gene07232.t1 MTR_0009s0350 30.634 284 176 7 240 517 68 336 7.61e-27 112
MS.gene07232.t1 MTR_0009s0340 30.634 284 176 7 240 517 68 336 7.61e-27 112
MS.gene07232.t1 MTR_6g025590 36.170 188 101 8 223 400 33 211 5.37e-24 101
MS.gene07232.t1 MTR_0408s0030 35.878 131 70 4 415 544 31 148 3.51e-18 82.0
MS.gene07232.t1 MTR_4g130790 27.016 248 155 6 246 486 25 253 1.11e-14 74.7
MS.gene07232.t1 MTR_6g024200 29.651 172 100 4 374 544 125 276 1.25e-14 75.1
MS.gene07232.t1 MTR_7g102580 43.023 86 39 2 320 400 73 153 2.77e-14 70.9
MS.gene07232.t1 MTR_2g436070 25.369 339 196 13 29 343 57 362 1.53e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07232.t1 AT1G02810 60.243 576 200 9 8 556 5 578 0.0 684
MS.gene07232.t1 AT4G02330 59.162 573 215 9 1 556 2 572 0.0 675
MS.gene07232.t1 AT2G47550 61.111 540 196 8 22 556 29 559 0.0 657
MS.gene07232.t1 AT3G10720 48.333 540 258 10 32 556 83 616 3.13e-171 499
MS.gene07232.t1 AT5G04970 44.936 543 272 9 32 556 88 621 2.53e-158 466
MS.gene07232.t1 AT2G45220 42.403 566 259 13 1 555 2 511 1.51e-136 406
MS.gene07232.t1 AT2G26440 40.935 535 281 11 30 555 39 547 2.02e-132 397
MS.gene07232.t1 AT5G51490 41.912 544 251 11 32 555 38 536 1.09e-130 392
MS.gene07232.t1 AT3G60730 45.872 436 218 7 126 555 96 519 3.75e-130 390
MS.gene07232.t1 AT3G43270 47.146 473 217 9 91 556 80 526 8.90e-130 389
MS.gene07232.t1 AT1G53830 42.963 540 280 7 29 555 63 587 1.58e-128 388
MS.gene07232.t1 AT4G33220 43.907 517 258 9 53 555 25 523 8.79e-128 384
MS.gene07232.t1 AT1G11580 47.685 432 193 7 127 555 156 557 3.79e-126 381
MS.gene07232.t1 AT1G11580 47.685 432 193 7 127 555 177 578 5.16e-126 382
MS.gene07232.t1 AT3G14310 42.048 547 277 10 32 555 63 592 1.66e-125 380
MS.gene07232.t1 AT3G05620 43.035 481 215 8 91 555 104 541 1.94e-125 379
MS.gene07232.t1 AT3G10720 63.462 260 95 0 297 556 1 260 8.05e-125 367
MS.gene07232.t1 AT1G23200 39.965 578 275 15 7 555 20 554 8.27e-124 375
MS.gene07232.t1 AT4G33220 54.572 339 144 3 218 555 73 402 2.23e-123 369
MS.gene07232.t1 AT5G53370 46.083 434 208 9 127 555 173 585 1.30e-121 370
MS.gene07232.t1 AT5G53370 46.083 434 208 9 127 555 209 621 3.80e-121 370
MS.gene07232.t1 AT5G04960 40.239 502 255 11 57 553 101 562 5.12e-121 368
MS.gene07232.t1 AT3G49220 45.890 438 211 9 123 555 180 596 6.18e-121 369
MS.gene07232.t1 AT3G49220 45.890 438 211 9 123 555 225 641 1.74e-120 369
MS.gene07232.t1 AT4G02300 40.463 561 287 12 4 555 10 532 9.38e-120 364
MS.gene07232.t1 AT5G51500 39.850 532 279 10 32 555 42 540 3.58e-119 363
MS.gene07232.t1 AT3G10710 39.513 534 279 13 26 555 68 561 9.42e-118 360
MS.gene07232.t1 AT2G26450 37.918 538 287 12 29 555 110 611 1.05e-115 356
MS.gene07232.t1 AT4G02320 41.545 479 249 9 81 555 67 518 1.60e-115 352
MS.gene07232.t1 AT4G00190 39.925 531 250 16 31 555 7 474 1.27e-114 348
MS.gene07232.t1 AT2G43050 41.929 477 216 9 88 556 94 517 2.00e-114 350
MS.gene07232.t1 AT3G05610 39.286 476 254 7 88 556 119 566 2.41e-114 354
MS.gene07232.t1 AT1G53840 38.026 547 286 13 27 549 64 581 1.66e-113 350
MS.gene07232.t1 AT3G59010 44.545 440 195 10 126 556 130 529 1.55e-111 343
MS.gene07232.t1 AT4G33230 37.037 540 298 13 29 555 96 606 2.67e-109 339
MS.gene07232.t1 AT5G27870 38.330 467 261 7 91 555 121 562 1.77e-104 330
MS.gene07232.t1 AT5G49180 41.920 427 231 6 126 551 156 566 4.60e-104 325
MS.gene07232.t1 AT3G47400 40.812 468 247 6 91 555 154 594 4.80e-104 325
MS.gene07232.t1 AT4G03930 42.459 431 215 9 126 555 126 524 6.35e-102 318
MS.gene07232.t1 AT3G14300 41.189 471 237 11 91 550 525 966 4.00e-101 327
MS.gene07232.t1 AT3G27980 41.492 429 210 8 130 555 107 497 1.49e-100 313
MS.gene07232.t1 AT5G20860 35.145 552 278 14 32 555 39 538 3.18e-99 311
MS.gene07232.t1 AT3G06830 39.954 433 239 8 126 553 150 566 3.66e-99 312
MS.gene07232.t1 AT1G11590 41.763 431 218 10 126 555 126 524 5.74e-99 310
MS.gene07232.t1 AT5G09760 46.774 310 152 6 243 543 241 546 6.00e-86 277
MS.gene07232.t1 AT5G09760 46.774 310 152 6 243 543 267 572 6.61e-86 278
MS.gene07232.t1 AT1G11370 52.869 244 112 1 243 486 46 286 4.38e-85 266
MS.gene07232.t1 AT4G15980 43.976 332 180 3 223 553 374 700 1.43e-84 277
MS.gene07232.t1 AT4G15980 43.976 332 180 3 223 553 384 710 2.62e-84 277
MS.gene07232.t1 AT5G64640 36.575 473 248 11 98 548 160 602 4.10e-84 273
MS.gene07232.t1 AT5G20860 32.282 539 257 13 32 542 39 497 1.15e-77 254
MS.gene07232.t1 AT2G47030 42.857 315 173 4 244 555 278 588 4.07e-74 247
MS.gene07232.t1 AT2G47040 31.306 559 343 12 31 555 44 595 7.74e-73 243
MS.gene07232.t1 AT3G62170 30.713 547 352 12 29 555 49 588 1.71e-70 237
MS.gene07232.t1 AT5G19730 35.350 314 175 7 242 544 85 381 7.38e-52 182
MS.gene07232.t1 AT3G29090 35.374 294 164 6 237 519 1 279 1.11e-49 174
MS.gene07232.t1 AT2G21610 33.224 304 181 7 242 544 50 332 3.20e-48 171
MS.gene07232.t1 AT2G21610 33.224 304 181 7 242 544 55 337 3.47e-48 171
MS.gene07232.t1 AT1G05310 34.936 312 179 6 243 544 91 388 4.25e-47 169
MS.gene07232.t1 AT2G36710 32.381 315 192 5 242 549 90 390 4.64e-47 170
MS.gene07232.t1 AT3G24130 34.472 322 176 8 243 550 34 334 1.27e-46 166
MS.gene07232.t1 AT5G18990 37.457 291 147 8 243 518 29 299 2.16e-46 166
MS.gene07232.t1 AT3G17060 31.090 312 186 7 243 545 46 337 1.40e-45 164
MS.gene07232.t1 AT2G36700 31.169 308 192 5 242 544 41 333 1.77e-45 163
MS.gene07232.t1 AT2G19150 29.721 323 197 8 239 551 37 339 2.85e-43 157
MS.gene07232.t1 AT5G47500 30.794 315 189 7 242 544 60 357 1.35e-40 151
MS.gene07232.t1 AT5G07430 31.429 315 195 7 234 544 58 355 2.62e-40 150
MS.gene07232.t1 AT5G55590 32.075 318 187 7 239 544 78 378 1.18e-39 149
MS.gene07232.t1 AT2G47280 31.579 323 185 10 243 550 35 336 1.10e-38 145
MS.gene07232.t1 AT5G26810 31.627 332 197 8 225 544 20 333 4.08e-38 143
MS.gene07232.t1 AT2G19150 32.061 262 150 7 239 490 37 280 1.94e-37 140
MS.gene07232.t1 AT5G55590 33.460 263 148 6 239 489 78 325 8.05e-37 140
MS.gene07232.t1 AT5G07420 29.967 307 194 7 242 544 66 355 8.81e-36 137
MS.gene07232.t1 AT1G44980 42.515 167 93 1 243 409 78 241 4.94e-35 132
MS.gene07232.t1 AT5G61680 31.068 309 189 9 242 544 68 358 3.57e-34 133
MS.gene07232.t1 AT1G69940 28.571 308 197 8 242 544 66 355 6.39e-33 129
MS.gene07232.t1 AT5G07410 28.571 308 197 8 242 544 66 355 1.07e-32 129

Find 110 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAACAGTTGACTTCATATT+TGG 0.172980 1.4:+70111551 MS.gene07232:CDS
TCACTAGCAACCGTGTTATT+TGG 0.218847 1.4:-70110977 None:intergenic
GTATAGCTGCAAATGGTTTC+TGG 0.244833 1.4:-70110269 None:intergenic
ATCATCACCACTCAAGAAAT+TGG 0.256704 1.4:-70111984 None:intergenic
GAAATTGGATACCGTGAAAT+TGG 0.260830 1.4:-70111969 None:intergenic
TTGTAGCTTTGAAGGGTATC+AGG 0.324620 1.4:+70111475 MS.gene07232:CDS
CTTTGTCTCAATCCACAATT+CGG 0.336867 1.4:+70110435 MS.gene07232:CDS
TATTAAAGCAGCTGATGATT+TGG 0.337337 1.4:+70111706 MS.gene07232:CDS
AATGGAAACATTTATGACTA+TGG 0.349973 1.4:+70110332 MS.gene07232:CDS
AACGTATTTGCCAATCAAAA+TGG 0.357020 1.4:+70110314 MS.gene07232:CDS
AGAACATCATGGCCACAAAA+TGG 0.357335 1.4:+70110749 MS.gene07232:CDS
TGGTCTGGTTATCATGTTAT+TGG 0.358685 1.4:+70111932 MS.gene07232:CDS
GACTAACCAACAAACATGTT+TGG 0.374749 1.4:+70110595 MS.gene07232:CDS
TTCTATAGTTGTAGCTTTGA+AGG 0.378500 1.4:+70111467 MS.gene07232:CDS
TATATCAATCCACTAGAGTA+TGG 0.378755 1.4:-70112028 None:intergenic
TTTACAATAAGTAGGGTTTA+CGG 0.380121 1.4:-70110291 None:intergenic
TATTGAATTCATGAACTTAC+GGG 0.391914 1.4:-70110387 None:intergenic
ACATTCAATTCGGCTACATT+TGG 0.394202 1.4:+70111145 MS.gene07232:CDS
ACCCTGCTGGTTGGCATGAA+TGG 0.394563 1.4:+70111825 MS.gene07232:CDS
GCAACTGCTTGGTGTTTGCT+TGG 0.397641 1.4:-70111416 None:intergenic
CACTTCTCATTGCAACTGCT+TGG 0.401773 1.4:-70111427 None:intergenic
GACCTTCCAAACATGTTTGT+TGG 0.404138 1.4:-70110601 None:intergenic
TATCGAGAATGCGATATATA+CGG 0.406490 1.4:+70111530 MS.gene07232:CDS
TTTGTCTCAATCCACAATTC+GGG 0.413019 1.4:+70110436 MS.gene07232:CDS
GCTTTATTTGACATCTTCAA+TGG 0.419717 1.4:-70110803 None:intergenic
AGATTGATTTGTTGTTGTAT+AGG 0.420233 1.4:-70110513 None:intergenic
TTCAAAGCTACAACTATAGA+AGG 0.420977 1.4:-70111465 None:intergenic
CTATTGAATTCATGAACTTA+CGG 0.421755 1.4:-70110388 None:intergenic
AAGTCTTCTGCTTGAGAAGT+TGG 0.427453 1.4:-70110548 None:intergenic
ATTTCTTGAGTGGTGATGAT+TGG 0.428264 1.4:+70111987 MS.gene07232:CDS
GAACAAGATCGAAAGTAGAT+AGG 0.433031 1.4:-70110213 None:intergenic
TTCCATTCATGCCAACCAGC+AGG 0.438837 1.4:-70111827 None:intergenic
TGGTTTCACAACATTCAATT+CGG 0.439204 1.4:+70111135 MS.gene07232:CDS
GTTTGTACCGTTCCAACATT+CGG 0.443951 1.4:-70111731 None:intergenic
CATTGTATACACATTCTCTA+AGG 0.446591 1.4:+70111501 MS.gene07232:CDS
ATTGTCGTTGTTAGTCAAGA+TGG 0.461728 1.4:+70110911 MS.gene07232:CDS
GTATCATTCCATGTAGCAAA+TGG 0.462739 1.4:+70110239 MS.gene07232:CDS
GGAGACCACAATGTTGTTGA+TGG 0.463514 1.4:+70111115 MS.gene07232:CDS
ATACTCTTGATACACACCTT+TGG 0.465883 1.4:-70111023 None:intergenic
ACCCTAGCCTTGTTCAAGAA+AGG 0.466853 1.4:+70110704 MS.gene07232:CDS
GAACTTACGGGATTGCGATA+AGG 0.466990 1.4:-70110375 None:intergenic
AGCCTTGTTCAAGAAAGGTT+GGG 0.473203 1.4:+70110709 MS.gene07232:CDS
TAGCCTTGTTCAAGAAAGGT+TGG 0.480777 1.4:+70110708 MS.gene07232:CDS
TACCGATGCAGCCAATTTCA+CGG 0.485475 1.4:+70111958 MS.gene07232:CDS
TACGAACCCTTGACCAACTA+CGG 0.486181 1.4:-70111360 None:intergenic
GTGGAACACCATTTGCTACA+TGG 0.489190 1.4:-70110247 None:intergenic
ATCAATCAAATAGTTATCAC+TGG 0.490773 1.4:+70111094 MS.gene07232:CDS
GTTTACGGTATAGCTGCAAA+TGG 0.494007 1.4:-70110276 None:intergenic
AACCTTTCTTGAACAAGGCT+AGG 0.499650 1.4:-70110706 None:intergenic
ATGATTCTGCTAGACGCAAT+GGG 0.504675 1.4:+70110837 MS.gene07232:CDS
TGTTTGTTGGTTAGTCAAAA+CGG 0.505795 1.4:-70110588 None:intergenic
TATCCTCGCCTTCCGCTAAG+TGG 0.509384 1.4:+70111608 MS.gene07232:CDS
AGCTACCGCGTCATTGATAG+TGG 0.510094 1.4:-70110948 None:intergenic
TTCTTCATATTTATCACCAA+AGG 0.513617 1.4:+70111007 MS.gene07232:CDS
AGACCATGTCACTCGATTCA+CGG 0.513655 1.4:-70111915 None:intergenic
TATGATTCTGCTAGACGCAA+TGG 0.514899 1.4:+70110836 MS.gene07232:CDS
GACCGTGGAAAGAATATTCA+AGG 0.515066 1.4:+70111765 MS.gene07232:CDS
TCAATAGACTCACAATTTCA+AGG 0.516078 1.4:+70110404 MS.gene07232:CDS
AGTTCGACCTTGAGCTGTGA+TGG 0.517049 1.4:-70111642 None:intergenic
GTTGACTTCATATTTGGAAA+CGG 0.519141 1.4:+70111557 MS.gene07232:CDS
GTCCTTGAATATTCTTTCCA+CGG 0.519966 1.4:-70111767 None:intergenic
GACAGTTTCATAAACCCTGC+TGG 0.520411 1.4:+70111812 MS.gene07232:CDS
TCTATAGTTGTAGCTTTGAA+GGG 0.521345 1.4:+70111468 MS.gene07232:CDS
ATTCTTTCCACGGTCTCCCT+AGG 0.521753 1.4:-70111757 None:intergenic
TACCGTGAAATTGGCTGCAT+CGG 0.524322 1.4:-70111960 None:intergenic
ATAACATTTCGCAACACCGC+TGG 0.525873 1.4:+70111392 MS.gene07232:CDS
GATGATTTGGCTCCGAATGT+TGG 0.529941 1.4:+70111719 MS.gene07232:CDS
ACTTTGTACTATGCAGAATA+CGG 0.531445 1.4:+70111869 MS.gene07232:CDS
GTGAATCGAGTGACATGGTC+TGG 0.537050 1.4:+70111917 MS.gene07232:CDS
AATAACACGGTTGCTAGTGA+TGG 0.541511 1.4:+70110980 MS.gene07232:CDS
GAATACGGCAACAGAGGAGC+GGG 0.544190 1.4:+70111884 MS.gene07232:CDS
CAAGCAGTTGCAATGAGAAG+TGG 0.548536 1.4:+70111428 MS.gene07232:CDS
TACTTGATGATGGTTGGAGA+GGG 0.549006 1.4:+70111070 MS.gene07232:CDS
ACGGTATCCAATTTCTTGAG+TGG 0.550073 1.4:+70111977 MS.gene07232:CDS
AACCAACAAACATGTTTGGA+AGG 0.550080 1.4:+70110599 MS.gene07232:CDS
GAGTATGGAACACCAGTTTG+AGG 0.551293 1.4:-70112013 None:intergenic
GATGATTGGATTCCTCAAAC+TGG 0.552199 1.4:+70112001 MS.gene07232:CDS
ACTGGTGTTCCATACTCTAG+TGG 0.555255 1.4:+70112019 MS.gene07232:CDS
ACCTTTCTTGAACAAGGCTA+GGG 0.557941 1.4:-70110705 None:intergenic
GGAACGGTACAAACATACCT+AGG 0.559615 1.4:+70111740 MS.gene07232:CDS
GAATTGAATTGTCCACTTAG+CGG 0.559760 1.4:-70111620 None:intergenic
TTCAATTCCATCACAGCTCA+AGG 0.560247 1.4:+70111635 MS.gene07232:CDS
GTTGTTAGTCAAGATGGAAG+TGG 0.562167 1.4:+70110917 MS.gene07232:CDS
ATCTTCAAGAGCCCGAATTG+TGG 0.568143 1.4:-70110447 None:intergenic
AAAGTAAAATAAGAACATCA+TGG 0.577883 1.4:+70110738 MS.gene07232:CDS
GTTTCATAAACCCTGCTGGT+TGG 0.584669 1.4:+70111816 MS.gene07232:CDS
TCCATTCATGCCAACCAGCA+GGG 0.585336 1.4:-70111826 None:intergenic
TTTCAGCCGTAGTTGGTCAA+GGG 0.587591 1.4:+70111354 MS.gene07232:intron
TTGGTGTTTGCTTGGTCCAG+CGG 0.591249 1.4:-70111408 None:intergenic
AACCCAACCTTTCTTGAACA+AGG 0.595250 1.4:-70110711 None:intergenic
GTACTTGATGATGGTTGGAG+AGG 0.601393 1.4:+70111069 MS.gene07232:CDS
ACTGACCCAAATCAAAACAC+TGG 0.605088 1.4:+70111662 MS.gene07232:CDS
TGAATTGTCCACTTAGCGGA+AGG 0.605583 1.4:-70111616 None:intergenic
TAGCTGCAAATGGTTTCTGG+TGG 0.617891 1.4:-70110266 None:intergenic
TGTCCACTTAGCGGAAGGCG+AGG 0.623788 1.4:-70111611 None:intergenic
AAAGCTACAACTATAGAAGG+TGG 0.633511 1.4:-70111462 None:intergenic
ATTCAAAACTCAATTCAGCA+AGG 0.638769 1.4:-70110478 None:intergenic
GCTGGTTGGCATGAATGGAA+TGG 0.651490 1.4:+70111830 MS.gene07232:CDS
GTTCTTCACTCTCTGATCAG+AGG 0.651544 1.4:-70110636 None:intergenic
TTTGGCTCCGAATGTTGGAA+CGG 0.654436 1.4:+70111724 MS.gene07232:CDS
TATGCAGAATACGGCAACAG+AGG 0.658760 1.4:+70111878 MS.gene07232:CDS
AGAATACGGCAACAGAGGAG+CGG 0.660300 1.4:+70111883 MS.gene07232:CDS
GCACCGTGAATCGAGTGACA+TGG 0.660965 1.4:+70111912 MS.gene07232:CDS
AAACATACCTAGGGAGACCG+TGG 0.663984 1.4:+70111750 MS.gene07232:CDS
GAACGGTACAAACATACCTA+GGG 0.671516 1.4:+70111741 MS.gene07232:CDS
AGCTGCTGCACCAAATAACA+CGG 0.671662 1.4:+70110967 MS.gene07232:CDS
CTTTACCACTATCAATGACG+CGG 0.681296 1.4:+70110943 MS.gene07232:CDS
TGAAACCATCAACAACATTG+TGG 0.688631 1.4:-70111120 None:intergenic
TACTAATGAAGATAGTGTTG+TGG 0.688812 1.4:+70110880 MS.gene07232:CDS
ATAGACTCACAATTTCAAGG+AGG 0.738552 1.4:+70110407 MS.gene07232:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTGTTTAGCTATATA+CGG + chr1.4:70111234-70111253 MS.gene07232:intron 15.0%
!! AAAGTAAAATAAGAACATCA+TGG + chr1.4:70110738-70110757 MS.gene07232:CDS 20.0%
!! AAGCATTTGAATTTCAAAAA+TGG + chr1.4:70110773-70110792 MS.gene07232:CDS 20.0%
!!! AATACGTTTTTACAATAAGT+AGG - chr1.4:70110302-70110321 None:intergenic 20.0%
!!! ATAAATGTTTCCATTTTGAT+TGG - chr1.4:70110327-70110346 None:intergenic 20.0%
!!! ATACGTTTTTACAATAAGTA+GGG - chr1.4:70110301-70110320 None:intergenic 20.0%
!!! ATCAAGTACTTTTTGTTTTT+GGG - chr1.4:70111058-70111077 None:intergenic 20.0%
!!! GATGTTCTTATTTTACTTTT+AGG - chr1.4:70110737-70110756 None:intergenic 20.0%
! AATGGAAACATTTATGACTA+TGG + chr1.4:70110332-70110351 MS.gene07232:CDS 25.0%
! ATAGATTATCTTCAACATTG+TGG - chr1.4:70111296-70111315 None:intergenic 25.0%
! ATCAATCAAATAGTTATCAC+TGG + chr1.4:70111094-70111113 MS.gene07232:CDS 25.0%
! CTATTGAATTCATGAACTTA+CGG - chr1.4:70110391-70110410 None:intergenic 25.0%
! TATTGAATTCATGAACTTAC+GGG - chr1.4:70110390-70110409 None:intergenic 25.0%
! TGGTAAGCAAATTTAATACT+TGG + chr1.4:70111165-70111184 MS.gene07232:intron 25.0%
! TTCTTCATATTTATCACCAA+AGG + chr1.4:70111007-70111026 MS.gene07232:CDS 25.0%
! TTTACAATAAGTAGGGTTTA+CGG - chr1.4:70110294-70110313 None:intergenic 25.0%
!! AGTTTTTATGCAATCTTTCA+TGG + chr1.4:70111790-70111809 MS.gene07232:CDS 25.0%
!!! AAACAAAAAGTACTTGATGA+TGG + chr1.4:70111060-70111079 MS.gene07232:CDS 25.0%
!!! AGATTGATTTGTTGTTGTAT+AGG - chr1.4:70110516-70110535 None:intergenic 25.0%
!!! CATCAAGTACTTTTTGTTTT+TGG - chr1.4:70111059-70111078 None:intergenic 25.0%
AACGTATTTGCCAATCAAAA+TGG + chr1.4:70110314-70110333 MS.gene07232:CDS 30.0%
ACTTTGTACTATGCAGAATA+CGG + chr1.4:70111869-70111888 MS.gene07232:CDS 30.0%
ATTCAAAACTCAATTCAGCA+AGG - chr1.4:70110481-70110500 None:intergenic 30.0%
CATTGTATACACATTCTCTA+AGG + chr1.4:70111501-70111520 MS.gene07232:CDS 30.0%
GCAAATTTAATACTTGGAGT+TGG + chr1.4:70111171-70111190 MS.gene07232:intron 30.0%
TACTAATGAAGATAGTGTTG+TGG + chr1.4:70110880-70110899 MS.gene07232:CDS 30.0%
TATATCAATCCACTAGAGTA+TGG - chr1.4:70112031-70112050 None:intergenic 30.0%
TATCGAGAATGCGATATATA+CGG + chr1.4:70111530-70111549 MS.gene07232:CDS 30.0%
TATTAAAGCAGCTGATGATT+TGG + chr1.4:70111706-70111725 MS.gene07232:CDS 30.0%
TCAATAGACTCACAATTTCA+AGG + chr1.4:70110404-70110423 MS.gene07232:CDS 30.0%
TGGTTTCACAACATTCAATT+CGG + chr1.4:70111135-70111154 MS.gene07232:CDS 30.0%
TTCAAAGCTACAACTATAGA+AGG - chr1.4:70111468-70111487 None:intergenic 30.0%
! GTTGACTTCATATTTGGAAA+CGG + chr1.4:70111557-70111576 MS.gene07232:CDS 30.0%
! TGTTTGTTGGTTAGTCAAAA+CGG - chr1.4:70110591-70110610 None:intergenic 30.0%
!! AAAAAGTACTTGATGATGGT+TGG + chr1.4:70111064-70111083 MS.gene07232:CDS 30.0%
!! GCTTTATTTGACATCTTCAA+TGG - chr1.4:70110806-70110825 None:intergenic 30.0%
!! TCTATAGTTGTAGCTTTGAA+GGG + chr1.4:70111468-70111487 MS.gene07232:CDS 30.0%
!! TTCTATAGTTGTAGCTTTGA+AGG + chr1.4:70111467-70111486 MS.gene07232:CDS 30.0%
!!! AAGTTCCAGTGTTTTGATTT+GGG - chr1.4:70111670-70111689 None:intergenic 30.0%
AAAGCTACAACTATAGAAGG+TGG - chr1.4:70111465-70111484 None:intergenic 35.0%
AACCAACAAACATGTTTGGA+AGG + chr1.4:70110599-70110618 MS.gene07232:CDS 35.0%
ACATTCAATTCGGCTACATT+TGG + chr1.4:70111145-70111164 MS.gene07232:CDS 35.0%
ATACTCTTGATACACACCTT+TGG - chr1.4:70111026-70111045 None:intergenic 35.0%
ATAGACTCACAATTTCAAGG+AGG + chr1.4:70110407-70110426 MS.gene07232:CDS 35.0%
ATCATCACCACTCAAGAAAT+TGG - chr1.4:70111987-70112006 None:intergenic 35.0%
ATTGTCGTTGTTAGTCAAGA+TGG + chr1.4:70110911-70110930 MS.gene07232:CDS 35.0%
CTTTGTCTCAATCCACAATT+CGG + chr1.4:70110435-70110454 MS.gene07232:CDS 35.0%
GAAATTGGATACCGTGAAAT+TGG - chr1.4:70111972-70111991 None:intergenic 35.0%
GAACAAGATCGAAAGTAGAT+AGG - chr1.4:70110216-70110235 None:intergenic 35.0%
GAATTGAATTGTCCACTTAG+CGG - chr1.4:70111623-70111642 None:intergenic 35.0%
GACTAACCAACAAACATGTT+TGG + chr1.4:70110595-70110614 MS.gene07232:CDS 35.0%
GTATCATTCCATGTAGCAAA+TGG + chr1.4:70110239-70110258 MS.gene07232:CDS 35.0%
GTCCTTGAATATTCTTTCCA+CGG - chr1.4:70111770-70111789 None:intergenic 35.0%
GTGGTCCAAAAATCTTCAAT+TGG - chr1.4:70111277-70111296 None:intergenic 35.0%
TGAAACCATCAACAACATTG+TGG - chr1.4:70111123-70111142 None:intergenic 35.0%
TGGTCTGGTTATCATGTTAT+TGG + chr1.4:70111932-70111951 MS.gene07232:CDS 35.0%
TTTGTCTCAATCCACAATTC+GGG + chr1.4:70110436-70110455 MS.gene07232:CDS 35.0%
! AGCAGCCAATTGAAGATTTT+TGG + chr1.4:70111269-70111288 MS.gene07232:intron 35.0%
! ATTTCTTGAGTGGTGATGAT+TGG + chr1.4:70111987-70112006 MS.gene07232:CDS 35.0%
! GGAACAGTTGACTTCATATT+TGG + chr1.4:70111551-70111570 MS.gene07232:CDS 35.0%
!!! GAAGTTCCAGTGTTTTGATT+TGG - chr1.4:70111671-70111690 None:intergenic 35.0%
!!! TTCAAATGCTTGCCATTTTG+TGG - chr1.4:70110764-70110783 None:intergenic 35.0%
AACCCAACCTTTCTTGAACA+AGG - chr1.4:70110714-70110733 None:intergenic 40.0%
AACCTTTCTTGAACAAGGCT+AGG - chr1.4:70110709-70110728 None:intergenic 40.0%
AAGTCTTCTGCTTGAGAAGT+TGG - chr1.4:70110551-70110570 None:intergenic 40.0%
AATAACACGGTTGCTAGTGA+TGG + chr1.4:70110980-70110999 MS.gene07232:CDS 40.0%
ACCTTTCTTGAACAAGGCTA+GGG - chr1.4:70110708-70110727 None:intergenic 40.0%
ACGGTATCCAATTTCTTGAG+TGG + chr1.4:70111977-70111996 MS.gene07232:CDS 40.0%
ACTGACCCAAATCAAAACAC+TGG + chr1.4:70111662-70111681 MS.gene07232:CDS 40.0%
AGAACATCATGGCCACAAAA+TGG + chr1.4:70110749-70110768 MS.gene07232:CDS 40.0%
ATGATTCTGCTAGACGCAAT+GGG + chr1.4:70110837-70110856 MS.gene07232:CDS 40.0%
CTTTACCACTATCAATGACG+CGG + chr1.4:70110943-70110962 MS.gene07232:CDS 40.0%
GAACGGTACAAACATACCTA+GGG + chr1.4:70111741-70111760 MS.gene07232:CDS 40.0%
GACCGTGGAAAGAATATTCA+AGG + chr1.4:70111765-70111784 MS.gene07232:CDS 40.0%
GACCTTCCAAACATGTTTGT+TGG - chr1.4:70110604-70110623 None:intergenic 40.0%
GATGATTGGATTCCTCAAAC+TGG + chr1.4:70112001-70112020 MS.gene07232:CDS 40.0%
GTATAGCTGCAAATGGTTTC+TGG - chr1.4:70110272-70110291 None:intergenic 40.0%
GTTGTTAGTCAAGATGGAAG+TGG + chr1.4:70110917-70110936 MS.gene07232:CDS 40.0%
GTTTACGGTATAGCTGCAAA+TGG - chr1.4:70110279-70110298 None:intergenic 40.0%
GTTTGTACCGTTCCAACATT+CGG - chr1.4:70111734-70111753 None:intergenic 40.0%
TATGATTCTGCTAGACGCAA+TGG + chr1.4:70110836-70110855 MS.gene07232:CDS 40.0%
TTCAATTCCATCACAGCTCA+AGG + chr1.4:70111635-70111654 MS.gene07232:CDS 40.0%
! TCACTAGCAACCGTGTTATT+TGG - chr1.4:70110980-70110999 None:intergenic 40.0%
! TGTGAATTTTCAGCCGTAGT+TGG + chr1.4:70111347-70111366 MS.gene07232:intron 40.0%
!! AGCCTTGTTCAAGAAAGGTT+GGG + chr1.4:70110709-70110728 MS.gene07232:CDS 40.0%
!! TACTTGATGATGGTTGGAGA+GGG + chr1.4:70111070-70111089 MS.gene07232:CDS 40.0%
!! TAGCCTTGTTCAAGAAAGGT+TGG + chr1.4:70110708-70110727 MS.gene07232:CDS 40.0%
!! TTGTAGCTTTGAAGGGTATC+AGG + chr1.4:70111475-70111494 MS.gene07232:CDS 40.0%
ACTGGTGTTCCATACTCTAG+TGG + chr1.4:70112019-70112038 MS.gene07232:CDS 45.0%
AGACCATGTCACTCGATTCA+CGG - chr1.4:70111918-70111937 None:intergenic 45.0%
AGCTGCTGCACCAAATAACA+CGG + chr1.4:70110967-70110986 MS.gene07232:CDS 45.0%
ATAACATTTCGCAACACCGC+TGG + chr1.4:70111392-70111411 MS.gene07232:CDS 45.0%
ATCTTCAAGAGCCCGAATTG+TGG - chr1.4:70110450-70110469 None:intergenic 45.0%
CAAGCAGTTGCAATGAGAAG+TGG + chr1.4:70111428-70111447 MS.gene07232:CDS 45.0%
CACTTCTCATTGCAACTGCT+TGG - chr1.4:70111430-70111449 None:intergenic 45.0%
GAACTTACGGGATTGCGATA+AGG - chr1.4:70110378-70110397 None:intergenic 45.0%
GACAGTTTCATAAACCCTGC+TGG + chr1.4:70111812-70111831 MS.gene07232:CDS 45.0%
GAGTATGGAACACCAGTTTG+AGG - chr1.4:70112016-70112035 None:intergenic 45.0%
GGAACGGTACAAACATACCT+AGG + chr1.4:70111740-70111759 MS.gene07232:CDS 45.0%
GGAGACCACAATGTTGTTGA+TGG + chr1.4:70111115-70111134 MS.gene07232:CDS 45.0%
GTTCTTCACTCTCTGATCAG+AGG - chr1.4:70110639-70110658 None:intergenic 45.0%
GTTTCATAAACCCTGCTGGT+TGG + chr1.4:70111816-70111835 MS.gene07232:CDS 45.0%
TACCGATGCAGCCAATTTCA+CGG + chr1.4:70111958-70111977 MS.gene07232:CDS 45.0%
TACCGTGAAATTGGCTGCAT+CGG - chr1.4:70111963-70111982 None:intergenic 45.0%
TACGAACCCTTGACCAACTA+CGG - chr1.4:70111363-70111382 None:intergenic 45.0%
TATGCAGAATACGGCAACAG+AGG + chr1.4:70111878-70111897 MS.gene07232:CDS 45.0%
TGAATTGTCCACTTAGCGGA+AGG - chr1.4:70111619-70111638 None:intergenic 45.0%
TTTCAGCCGTAGTTGGTCAA+GGG + chr1.4:70111354-70111373 MS.gene07232:intron 45.0%
! GATGATTTGGCTCCGAATGT+TGG + chr1.4:70111719-70111738 MS.gene07232:CDS 45.0%
! GTGGAACACCATTTGCTACA+TGG - chr1.4:70110250-70110269 None:intergenic 45.0%
! TAGCTGCAAATGGTTTCTGG+TGG - chr1.4:70110269-70110288 None:intergenic 45.0%
! TTTGGCTCCGAATGTTGGAA+CGG + chr1.4:70111724-70111743 MS.gene07232:CDS 45.0%
! TTTTCAGCCGTAGTTGGTCA+AGG + chr1.4:70111353-70111372 MS.gene07232:intron 45.0%
!! ACCCTAGCCTTGTTCAAGAA+AGG + chr1.4:70110704-70110723 MS.gene07232:CDS 45.0%
!! GTACTTGATGATGGTTGGAG+AGG + chr1.4:70111069-70111088 MS.gene07232:CDS 45.0%
AAACATACCTAGGGAGACCG+TGG + chr1.4:70111750-70111769 MS.gene07232:CDS 50.0%
AGAATACGGCAACAGAGGAG+CGG + chr1.4:70111883-70111902 MS.gene07232:CDS 50.0%
AGCTACCGCGTCATTGATAG+TGG - chr1.4:70110951-70110970 None:intergenic 50.0%
AGTTCGACCTTGAGCTGTGA+TGG - chr1.4:70111645-70111664 None:intergenic 50.0%
ATTCTTTCCACGGTCTCCCT+AGG - chr1.4:70111760-70111779 None:intergenic 50.0%
GCTGGTTGGCATGAATGGAA+TGG + chr1.4:70111830-70111849 MS.gene07232:CDS 50.0%
GTGAATCGAGTGACATGGTC+TGG + chr1.4:70111917-70111936 MS.gene07232:CDS 50.0%
TCCATTCATGCCAACCAGCA+GGG - chr1.4:70111829-70111848 None:intergenic 50.0%
TTCCATTCATGCCAACCAGC+AGG - chr1.4:70111830-70111849 None:intergenic 50.0%
! TTGGTGTTTGCTTGGTCCAG+CGG - chr1.4:70111411-70111430 None:intergenic 50.0%
!! GCAACTGCTTGGTGTTTGCT+TGG - chr1.4:70111419-70111438 None:intergenic 50.0%
GAATACGGCAACAGAGGAGC+GGG + chr1.4:70111884-70111903 MS.gene07232:CDS 55.0%
GCACCGTGAATCGAGTGACA+TGG + chr1.4:70111912-70111931 MS.gene07232:CDS 55.0%
TATCCTCGCCTTCCGCTAAG+TGG + chr1.4:70111608-70111627 MS.gene07232:CDS 55.0%
! ACCCTGCTGGTTGGCATGAA+TGG + chr1.4:70111825-70111844 MS.gene07232:CDS 55.0%
TGTCCACTTAGCGGAAGGCG+AGG - chr1.4:70111614-70111633 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 70110188 70112051 70110188 ID=MS.gene07232
chr1.4 mRNA 70110188 70112051 70110188 ID=MS.gene07232.t1;Parent=MS.gene07232
chr1.4 exon 70110188 70111166 70110188 ID=MS.gene07232.t1.exon1;Parent=MS.gene07232.t1
chr1.4 CDS 70110188 70111166 70110188 ID=cds.MS.gene07232.t1;Parent=MS.gene07232.t1
chr1.4 exon 70111360 70112051 70111360 ID=MS.gene07232.t1.exon2;Parent=MS.gene07232.t1
chr1.4 CDS 70111360 70112051 70111360 ID=cds.MS.gene07232.t1;Parent=MS.gene07232.t1
Gene Sequence

>MS.gene07232

ATGGCTCTCAAACACAAAACTATTGCCTATCTACTTTCGATCTTGTTCTTTGTATCATTCCATGTAGCAAATGGTGTTCCACCAGAAACCATTTGCAGCTATACCGTAAACCCTACTTATTGTAAAAACGTATTTGCCAATCAAAATGGAAACATTTATGACTATGGTAAAATTTCAATTCGAAAATCCTTATCGCAATCCCGTAAGTTCATGAATTCAATAGACTCACAATTTCAAGGAGGTTCATCTTTGTCTCAATCCACAATTCGGGCTCTTGAAGATTGTCGATTCCTTGCTGAATTGAGTTTTGAATACTTATCAAACACCTATACAACAACAAATCAATCTAGTAATGTTCTTCCAACTTCTCAAGCAGAAGACTTTGAAACTTTTCTTAGTGCCGTTTTGACTAACCAACAAACATGTTTGGAAGGTCTAAACACTATAGCCTCTGATCAGAGAGTGAAGAACGACTTAACGTCATTGCTCTCAGATGACATGAAGCTTCATAGTGTCACCCTAGCCTTGTTCAAGAAAGGTTGGGTTCCTAAAAGTAAAATAAGAACATCATGGCCACAAAATGGCAAGCATTTGAATTTCAAAAATGGTCATTTGCCATTGAAGATGTCAAATAAAGCACGTGCTATTTATGATTCTGCTAGACGCAATGGGAGAAAACTACTTCAAACTAATACTAATGAAGATAGTGTTGTGGTGAGTGATATTGTCGTTGTTAGTCAAGATGGAAGTGGAAACTTTACCACTATCAATGACGCGGTAGCTGCTGCACCAAATAACACGGTTGCTAGTGATGGATACTTCTTCATATTTATCACCAAAGGTGTGTATCAAGAGTATGTATCTATACCCAAAAACAAAAAGTACTTGATGATGGTTGGAGAGGGAATCAATCAAATAGTTATCACTGGAGACCACAATGTTGTTGATGGTTTCACAACATTCAATTCGGCTACATTTGGTAAGCAAATTTAATACTTGGAGTTGGACATATTCAATATACTATTACAAAAAAATGATATTTCATCATAAATTGTTTAGCTATATACGGATTAAAAAATTCAGCAGCCAATTGAAGATTTTTGGACCACAATGTTGAAGATAATCTATAGTTTAAAAATTTCACTAATTTGATGTTTTTTGTGAATTTTCAGCCGTAGTTGGTCAAGGGTTCGTAGCAGTTAACATAACATTTCGCAACACCGCTGGACCAAGCAAACACCAAGCAGTTGCAATGAGAAGTGGAGCAGATATGTCCACCTTCTATAGTTGTAGCTTTGAAGGGTATCAGGACACATTGTATACACATTCTCTAAGGCAGTTTTATCGAGAATGCGATATATACGGAACAGTTGACTTCATATTTGGAAACGGTGCAGTTGTTTTGCAAAATTGTAACATTTATCCTCGCCTTCCGCTAAGTGGACAATTCAATTCCATCACAGCTCAAGGTCGAACTGACCCAAATCAAAACACTGGAACTTCTATACAAAATGCAACTATTAAAGCAGCTGATGATTTGGCTCCGAATGTTGGAACGGTACAAACATACCTAGGGAGACCGTGGAAAGAATATTCAAGGACAGTTTTTATGCAATCTTTCATGGACAGTTTCATAAACCCTGCTGGTTGGCATGAATGGAATGGTGATTTTGCGTTGAATACTTTGTACTATGCAGAATACGGCAACAGAGGAGCGGGTTCAAGCACCGTGAATCGAGTGACATGGTCTGGTTATCATGTTATTGGTGCTACCGATGCAGCCAATTTCACGGTATCCAATTTCTTGAGTGGTGATGATTGGATTCCTCAAACTGGTGTTCCATACTCTAGTGGATTGATATAG
Protein sequence

>MS.gene07232.t1

MALKHKTIAYLLSILFFVSFHVANGVPPETICSYTVNPTYCKNVFANQNGNIYDYGKISIRKSLSQSRKFMNSIDSQFQGGSSLSQSTIRALEDCRFLAELSFEYLSNTYTTTNQSSNVLPTSQAEDFETFLSAVLTNQQTCLEGLNTIASDQRVKNDLTSLLSDDMKLHSVTLALFKKGWVPKSKIRTSWPQNGKHLNFKNGHLPLKMSNKARAIYDSARRNGRKLLQTNTNEDSVVVSDIVVVSQDGSGNFTTINDAVAAAPNNTVASDGYFFIFITKGVYQEYVSIPKNKKYLMMVGEGINQIVITGDHNVVDGFTTFNSATFAVVGQGFVAVNITFRNTAGPSKHQAVAMRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNGAVVLQNCNIYPRLPLSGQFNSITAQGRTDPNQNTGTSIQNATIKAADDLAPNVGTVQTYLGRPWKEYSRTVFMQSFMDSFINPAGWHEWNGDFALNTLYYAEYGNRGAGSSTVNRVTWSGYHVIGATDAANFTVSNFLSGDDWIPQTGVPYSSGLI