AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07234

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07234.t1 MTR_1g088020 96.403 556 20 0 1 556 1 556 0.0 1124
MS.gene07234.t1 MTR_1g088225 95.504 556 23 1 1 556 1 554 0.0 1083
MS.gene07234.t1 MTR_1g054880 87.701 561 62 2 1 556 1 559 0.0 1005
MS.gene07234.t1 MTR_0458s0010 82.194 556 62 4 1 556 1 519 0.0 894
MS.gene07234.t1 MTR_7g108890 75.752 532 126 2 26 556 34 563 0.0 853
MS.gene07234.t1 MTR_7g108875 66.604 533 173 3 26 556 36 565 0.0 748
MS.gene07234.t1 MTR_7g108900 65.974 529 173 5 26 551 32 556 0.0 729
MS.gene07234.t1 MTR_0458s0030 98.491 265 4 0 292 556 51 315 0.0 553
MS.gene07234.t1 MTR_0458s0030 82.353 51 9 0 1 51 1 51 3.21e-22 97.8
MS.gene07234.t1 MTR_1g088040 98.491 265 4 0 292 556 51 315 0.0 553
MS.gene07234.t1 MTR_1g088040 82.353 51 9 0 1 51 1 51 3.21e-22 97.8
MS.gene07234.t1 MTR_1g083520 50.547 548 237 9 12 555 11 528 0.0 525
MS.gene07234.t1 MTR_3g010770 47.610 544 260 9 32 556 39 576 3.25e-173 502
MS.gene07234.t1 MTR_8g042910 47.681 539 263 7 32 555 78 612 2.62e-171 499
MS.gene07234.t1 MTR_7g108905 50.928 485 197 10 77 551 99 552 1.94e-155 456
MS.gene07234.t1 MTR_4g025690 44.858 564 243 17 8 555 2 513 7.11e-141 417
MS.gene07234.t1 MTR_4g025730 45.318 534 231 15 29 555 30 509 1.44e-138 411
MS.gene07234.t1 MTR_8g023310 44.942 514 234 9 51 555 116 589 2.65e-133 400
MS.gene07234.t1 MTR_4g124520 46.636 431 196 6 127 555 123 521 4.20e-133 398
MS.gene07234.t1 MTR_4g087980 46.186 472 212 9 88 555 83 516 8.42e-133 397
MS.gene07234.t1 MTR_2g044810 40.669 568 281 11 5 555 6 534 9.12e-133 397
MS.gene07234.t1 MTR_2g044880 45.142 494 218 12 73 555 74 525 9.60e-133 397
MS.gene07234.t1 MTR_1g008140 42.385 545 270 11 32 555 86 607 1.98e-132 399
MS.gene07234.t1 MTR_8g104655 42.599 554 282 12 8 555 18 541 8.10e-132 395
MS.gene07234.t1 MTR_8g104645 55.723 332 143 3 225 555 44 372 9.23e-131 386
MS.gene07234.t1 MTR_7g112580 44.093 474 219 9 91 555 106 542 1.56e-130 392
MS.gene07234.t1 MTR_8g042900 45.570 474 224 11 84 555 140 581 1.77e-129 390
MS.gene07234.t1 MTR_4g025670 44.654 477 216 8 83 555 57 489 5.98e-129 386
MS.gene07234.t1 MTR_4g087970 44.444 468 224 9 91 555 83 517 9.15e-129 387
MS.gene07234.t1 MTR_3g010780 44.872 468 228 11 88 555 137 574 1.30e-128 388
MS.gene07234.t1 MTR_3g091380 42.115 539 274 11 32 555 82 597 5.23e-127 385
MS.gene07234.t1 MTR_7g050980 44.632 475 212 11 91 555 122 555 5.87e-127 383
MS.gene07234.t1 MTR_7g050870 44.820 473 214 11 91 555 121 554 1.35e-126 382
MS.gene07234.t1 MTR_7g050950 41.551 503 246 11 60 555 92 553 1.58e-122 372
MS.gene07234.t1 MTR_4g035980 40.260 539 268 13 32 555 40 539 1.04e-120 367
MS.gene07234.t1 MTR_3g033690 40.260 539 259 12 32 555 36 526 1.71e-119 363
MS.gene07234.t1 MTR_3g008720 39.479 537 267 13 32 555 36 527 3.56e-118 360
MS.gene07234.t1 MTR_3g008640 39.683 567 280 14 8 555 4 527 8.71e-118 358
MS.gene07234.t1 MTR_3g008700 39.626 535 269 11 32 555 36 527 6.66e-117 356
MS.gene07234.t1 MTR_4g124550 41.277 470 249 7 91 555 146 593 7.86e-117 358
MS.gene07234.t1 MTR_7g053360 39.085 568 282 15 8 555 4 527 3.21e-116 355
MS.gene07234.t1 MTR_1g086210 38.046 481 263 7 91 555 108 569 5.57e-107 332
MS.gene07234.t1 MTR_8g023150 38.104 538 289 14 29 555 78 582 3.02e-106 330
MS.gene07234.t1 MTR_2g044810 57.143 252 108 0 304 555 214 465 4.04e-105 324
MS.gene07234.t1 MTR_1g086190 35.795 528 321 8 31 555 51 563 1.24e-102 321
MS.gene07234.t1 MTR_7g112590 34.783 552 322 11 21 554 51 582 4.26e-102 320
MS.gene07234.t1 MTR_8g104580 37.726 554 276 15 8 555 10 500 4.76e-102 317
MS.gene07234.t1 MTR_1g083510 38.831 479 262 12 91 554 120 582 1.13e-101 319
MS.gene07234.t1 MTR_0618s0020 60.526 228 89 1 329 555 1 228 6.15e-100 302
MS.gene07234.t1 MTR_2g044660 50.479 313 148 3 243 555 327 632 5.08e-99 313
MS.gene07234.t1 MTR_1g083470 36.966 468 263 8 91 551 124 566 9.29e-97 306
MS.gene07234.t1 MTR_1g083500 36.966 468 263 8 91 551 124 566 9.29e-97 306
MS.gene07234.t1 MTR_1g083490 34.375 544 317 13 21 551 55 571 1.82e-95 303
MS.gene07234.t1 MTR_4g005170 34.206 535 313 12 29 551 64 571 1.64e-94 301
MS.gene07234.t1 MTR_7g110560 33.636 550 327 13 17 556 29 550 2.32e-94 299
MS.gene07234.t1 MTR_4g005180 34.066 546 316 13 21 551 37 553 3.83e-94 299
MS.gene07234.t1 MTR_8g093460 47.799 318 150 6 238 544 228 540 4.15e-94 298
MS.gene07234.t1 MTR_7g110490 36.897 477 275 8 88 550 105 569 3.95e-91 291
MS.gene07234.t1 MTR_7g110510 36.897 477 275 8 88 550 105 569 3.95e-91 291
MS.gene07234.t1 MTR_4g120280 37.838 444 235 11 125 554 155 571 4.38e-90 288
MS.gene07234.t1 MTR_7g110440 35.908 479 281 8 91 555 108 574 7.47e-90 288
MS.gene07234.t1 MTR_3g095920 35.534 515 270 13 62 554 89 563 9.27e-90 287
MS.gene07234.t1 MTR_4g120290 37.020 443 240 10 125 554 155 571 1.15e-87 282
MS.gene07234.t1 MTR_2g436040 32.458 533 318 10 29 552 44 543 1.12e-86 280
MS.gene07234.t1 MTR_5g083620 41.009 317 175 5 244 555 47 356 2.46e-79 253
MS.gene07234.t1 MTR_8g088610 40.181 331 184 6 225 552 54 373 1.40e-78 252
MS.gene07234.t1 MTR_2g436050 32.037 540 320 11 29 554 57 563 1.60e-77 255
MS.gene07234.t1 MTR_7g110420 33.401 491 289 11 91 555 108 586 8.99e-75 248
MS.gene07234.t1 MTR_7g107180 42.540 315 165 6 243 555 7 307 1.18e-74 239
MS.gene07234.t1 MTR_2g105560 40.000 315 171 6 243 555 41 339 7.83e-73 236
MS.gene07234.t1 MTR_7g110430 33.056 481 258 11 91 555 108 540 6.69e-71 237
MS.gene07234.t1 MTR_7g111560 29.520 542 317 13 30 554 62 555 8.50e-69 232
MS.gene07234.t1 MTR_6g012800 34.954 329 180 10 242 553 5 316 9.20e-53 182
MS.gene07234.t1 MTR_1g086540 33.333 357 203 9 199 544 12 344 9.41e-52 181
MS.gene07234.t1 MTR_6g024165 35.962 317 167 12 242 544 40 334 5.47e-50 176
MS.gene07234.t1 MTR_6g088810 35.410 305 169 7 251 544 90 377 8.39e-50 176
MS.gene07234.t1 MTR_7g011530 33.232 328 187 9 242 553 5 316 3.09e-49 173
MS.gene07234.t1 MTR_6g042660 34.653 303 162 8 221 518 25 296 1.15e-48 172
MS.gene07234.t1 MTR_8g102380 33.758 314 178 7 244 544 81 377 2.17e-48 172
MS.gene07234.t1 MTR_2g039530 39.677 310 146 11 225 523 40 319 7.67e-48 170
MS.gene07234.t1 MTR_7g092780 33.974 312 182 6 243 544 90 387 2.93e-47 170
MS.gene07234.t1 MTR_1g033050 33.651 315 176 7 242 548 17 306 1.18e-43 158
MS.gene07234.t1 MTR_2g033970 32.372 312 182 7 243 545 56 347 3.31e-43 157
MS.gene07234.t1 MTR_4g124740 32.268 313 176 9 242 544 53 339 8.93e-43 156
MS.gene07234.t1 MTR_7g102600 29.738 343 211 7 209 544 74 393 1.42e-41 154
MS.gene07234.t1 MTR_8g102380 35.496 262 140 7 244 492 81 326 3.69e-41 151
MS.gene07234.t1 MTR_5g012600 31.447 318 189 7 242 547 62 362 4.05e-41 152
MS.gene07234.t1 MTR_5g083590 29.747 316 167 6 243 556 7 269 1.46e-40 148
MS.gene07234.t1 MTR_5g095490 32.468 308 179 7 249 544 67 357 2.87e-40 150
MS.gene07234.t1 MTR_6g042690 32.803 314 175 10 243 544 39 328 4.26e-40 149
MS.gene07234.t1 MTR_5g093970 33.226 310 184 7 239 544 39 329 4.04e-39 146
MS.gene07234.t1 MTR_2g436600 30.990 313 176 10 243 545 55 337 1.86e-37 142
MS.gene07234.t1 MTR_5g088300 31.922 307 185 7 239 544 33 316 4.44e-37 140
MS.gene07234.t1 MTR_4g051810 31.068 309 192 6 238 546 32 319 1.13e-34 133
MS.gene07234.t1 MTR_5g088290 30.619 307 190 7 239 544 44 328 2.40e-34 133
MS.gene07234.t1 MTR_8g036225 31.034 319 176 10 242 544 32 322 2.80e-31 124
MS.gene07234.t1 MTR_5g088280 30.619 307 189 7 239 544 35 318 2.91e-31 124
MS.gene07234.t1 MTR_4g074290 29.032 310 199 7 240 544 68 361 1.27e-29 120
MS.gene07234.t1 MTR_2g073390 28.846 312 193 10 242 544 70 361 8.68e-28 115
MS.gene07234.t1 MTR_0009s0350 30.634 284 176 7 240 517 68 336 1.53e-27 114
MS.gene07234.t1 MTR_0009s0340 30.634 284 176 7 240 517 68 336 1.53e-27 114
MS.gene07234.t1 MTR_6g025590 35.638 188 102 7 223 400 33 211 1.52e-23 100
MS.gene07234.t1 MTR_0408s0030 35.878 131 70 4 415 544 31 148 9.87e-18 80.9
MS.gene07234.t1 MTR_6g024200 29.651 172 100 4 374 544 125 276 1.34e-14 74.7
MS.gene07234.t1 MTR_4g130790 31.863 204 122 7 246 439 25 221 2.34e-14 73.9
MS.gene07234.t1 MTR_7g102580 43.023 86 39 2 320 400 73 153 7.40e-14 69.7
MS.gene07234.t1 MTR_2g436070 25.664 339 195 13 29 343 57 362 2.28e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07234.t1 AT1G02810 60.417 576 199 9 8 556 5 578 0.0 690
MS.gene07234.t1 AT4G02330 59.511 573 213 9 1 556 2 572 0.0 683
MS.gene07234.t1 AT2G47550 61.667 540 193 8 22 556 29 559 0.0 665
MS.gene07234.t1 AT3G10720 48.519 540 257 10 32 556 83 616 8.98e-173 503
MS.gene07234.t1 AT5G04970 45.471 541 272 10 32 556 88 621 5.09e-159 468
MS.gene07234.t1 AT2G45220 42.806 563 261 13 1 555 2 511 1.13e-137 409
MS.gene07234.t1 AT2G26440 41.682 535 277 11 30 555 39 547 1.67e-136 407
MS.gene07234.t1 AT3G60730 47.465 434 214 9 126 555 96 519 1.36e-130 391
MS.gene07234.t1 AT5G51490 42.096 544 250 11 32 555 38 536 2.00e-130 391
MS.gene07234.t1 AT3G43270 46.921 471 221 9 91 556 80 526 3.16e-130 390
MS.gene07234.t1 AT4G33220 46.105 475 227 9 91 555 68 523 4.82e-130 390
MS.gene07234.t1 AT1G53830 43.148 540 279 7 29 555 63 587 7.81e-130 392
MS.gene07234.t1 AT1G23200 40.484 578 272 15 7 555 20 554 1.30e-127 385
MS.gene07234.t1 AT3G05620 43.243 481 214 8 91 555 104 541 2.05e-127 384
MS.gene07234.t1 AT3G14310 42.048 547 277 10 32 555 63 592 1.27e-126 384
MS.gene07234.t1 AT1G11580 39.623 583 284 14 2 555 14 557 7.16e-126 380
MS.gene07234.t1 AT1G11580 39.623 583 284 14 2 555 35 578 1.13e-125 380
MS.gene07234.t1 AT3G10720 63.462 260 95 0 297 556 1 260 4.53e-125 368
MS.gene07234.t1 AT4G33220 54.867 339 143 3 218 555 73 402 6.92e-125 372
MS.gene07234.t1 AT5G53370 46.528 432 209 9 127 555 173 585 1.48e-123 375
MS.gene07234.t1 AT3G49220 46.119 438 210 9 123 555 180 596 3.43e-123 375
MS.gene07234.t1 AT5G53370 41.386 534 276 13 32 555 115 621 3.91e-123 375
MS.gene07234.t1 AT3G49220 46.119 438 210 9 123 555 225 641 1.48e-122 375
MS.gene07234.t1 AT4G02300 40.642 561 286 12 4 555 10 532 3.93e-122 370
MS.gene07234.t1 AT2G26450 38.848 538 282 12 29 555 110 611 1.00e-120 369
MS.gene07234.t1 AT5G04960 39.960 498 262 10 57 553 101 562 2.66e-120 366
MS.gene07234.t1 AT5G51500 40.338 533 275 12 32 555 42 540 4.73e-119 362
MS.gene07234.t1 AT3G10710 39.888 534 277 14 26 555 68 561 1.34e-117 359
MS.gene07234.t1 AT4G02320 41.545 479 249 9 81 555 67 518 5.56e-116 353
MS.gene07234.t1 AT4G00190 39.366 536 246 14 31 555 7 474 1.60e-115 351
MS.gene07234.t1 AT3G05610 36.636 535 301 10 31 556 61 566 1.05e-114 355
MS.gene07234.t1 AT1G53840 38.391 547 284 14 27 549 64 581 8.27e-114 350
MS.gene07234.t1 AT2G43050 41.702 470 227 8 88 556 94 517 1.91e-111 342
MS.gene07234.t1 AT4G33230 36.514 545 294 12 29 555 96 606 6.18e-111 343
MS.gene07234.t1 AT3G59010 43.981 432 209 7 126 556 130 529 2.20e-110 340
MS.gene07234.t1 AT5G27870 38.116 467 262 7 91 555 121 562 2.33e-106 335
MS.gene07234.t1 AT5G49180 37.429 529 307 7 29 551 56 566 5.79e-106 330
MS.gene07234.t1 AT3G47400 41.239 468 245 6 91 555 154 594 4.05e-104 325
MS.gene07234.t1 AT3G14300 40.851 470 240 10 91 550 525 966 7.87e-101 326
MS.gene07234.t1 AT3G06830 40.000 430 243 6 126 553 150 566 2.14e-100 315
MS.gene07234.t1 AT5G20860 35.326 552 277 14 32 555 39 538 5.33e-100 313
MS.gene07234.t1 AT4G03930 42.227 431 216 9 126 555 126 524 7.20e-100 312
MS.gene07234.t1 AT3G27980 41.259 429 211 8 130 555 107 497 1.50e-98 308
MS.gene07234.t1 AT1G11590 41.531 431 219 10 126 555 126 524 7.42e-97 305
MS.gene07234.t1 AT5G09760 46.835 316 143 8 243 543 241 546 1.06e-85 276
MS.gene07234.t1 AT5G09760 46.835 316 143 8 243 543 267 572 1.39e-85 276
MS.gene07234.t1 AT1G11370 52.869 244 112 1 243 486 46 286 3.69e-85 266
MS.gene07234.t1 AT4G15980 43.976 332 180 3 223 553 374 700 9.88e-85 278
MS.gene07234.t1 AT4G15980 43.976 332 180 3 223 553 384 710 1.87e-84 277
MS.gene07234.t1 AT5G64640 35.849 477 246 11 98 548 160 602 4.10e-82 268
MS.gene07234.t1 AT5G20860 32.468 539 256 13 32 542 39 497 1.44e-78 256
MS.gene07234.t1 AT2G47030 43.175 315 172 4 244 555 278 588 1.80e-74 248
MS.gene07234.t1 AT2G47040 32.086 561 336 12 31 555 44 595 2.49e-74 248
MS.gene07234.t1 AT3G62170 31.216 551 344 12 29 555 49 588 6.60e-72 241
MS.gene07234.t1 AT5G19730 35.350 314 175 7 242 544 85 381 1.17e-51 181
MS.gene07234.t1 AT3G29090 35.154 293 164 6 237 518 1 278 7.35e-50 175
MS.gene07234.t1 AT2G36710 33.016 315 190 5 242 549 90 390 2.50e-48 173
MS.gene07234.t1 AT1G05310 35.577 312 177 6 243 544 91 388 4.57e-48 172
MS.gene07234.t1 AT2G21610 32.673 303 184 6 242 544 50 332 5.99e-48 171
MS.gene07234.t1 AT2G21610 32.673 303 184 6 242 544 55 337 6.84e-48 171
MS.gene07234.t1 AT3G24130 34.783 322 175 8 243 550 34 334 8.41e-47 167
MS.gene07234.t1 AT5G18990 37.457 291 147 8 243 518 29 299 1.89e-46 166
MS.gene07234.t1 AT3G17060 31.410 312 185 7 243 545 46 337 1.07e-45 164
MS.gene07234.t1 AT2G36700 31.169 308 192 5 242 544 41 333 1.90e-45 163
MS.gene07234.t1 AT2G19150 30.031 323 196 8 239 551 37 339 7.19e-44 159
MS.gene07234.t1 AT5G07430 32.063 315 193 7 234 544 58 355 2.25e-41 153
MS.gene07234.t1 AT5G47500 31.111 315 188 7 242 544 60 357 6.79e-41 152
MS.gene07234.t1 AT2G47280 31.889 323 184 10 243 550 35 336 3.89e-39 146
MS.gene07234.t1 AT5G55590 32.075 318 187 7 239 544 78 378 5.01e-39 147
MS.gene07234.t1 AT5G26810 31.928 332 196 8 225 544 20 333 1.92e-38 144
MS.gene07234.t1 AT2G19150 32.443 262 149 7 239 490 37 280 4.14e-38 142
MS.gene07234.t1 AT5G55590 33.840 263 147 6 239 489 78 325 4.69e-37 140
MS.gene07234.t1 AT5G07420 30.421 309 190 8 242 544 66 355 1.22e-36 140
MS.gene07234.t1 AT1G44980 42.515 167 93 1 243 409 78 241 5.09e-35 132
MS.gene07234.t1 AT5G61680 31.068 309 189 9 242 544 68 358 1.95e-34 134
MS.gene07234.t1 AT1G69940 28.896 308 196 8 242 544 66 355 1.32e-33 131
MS.gene07234.t1 AT5G07410 28.896 308 196 8 242 544 66 355 2.19e-33 131
MS.gene07234.t1 AT3G49220 30.769 208 119 8 123 326 225 411 5.96e-17 83.6

Find 109 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAACAGTTGACTTCATATT+TGG 0.172980 1.4:-70087894 MS.gene07234:CDS
TCACTAGCAACCGTGTTATT+TGG 0.218847 1.4:+70088558 None:intergenic
GTAGAGCTGCAAATGGTTTC+TGG 0.229742 1.4:+70089266 None:intergenic
GAAATTGGACACCGTGAAAT+TGG 0.260395 1.4:+70087476 None:intergenic
ATCATCACCACTCAAGAAAT+TGG 0.269177 1.4:+70087461 None:intergenic
TTGTAGCTTTGAAGGGTATC+AGG 0.324620 1.4:-70087970 MS.gene07234:CDS
CTTTGTCTCAATCCACAATT+CGG 0.336867 1.4:-70089100 MS.gene07234:CDS
TATTAAAGCAGCAGATGATT+TGG 0.344745 1.4:-70087739 MS.gene07234:CDS
AATGGAAACATTTATGACTA+TGG 0.349973 1.4:-70089203 MS.gene07234:CDS
AACGTATTTGCCAATCAAAA+TGG 0.357020 1.4:-70089221 MS.gene07234:CDS
AGAACATCATGGCCACAAAA+TGG 0.357335 1.4:-70088786 MS.gene07234:CDS
GACTAACCAACAAACATGTT+TGG 0.374749 1.4:-70088940 MS.gene07234:CDS
TTCTATAGTTGTAGCTTTGA+AGG 0.378500 1.4:-70087978 MS.gene07234:CDS
TATATCAATCCACTAGAGTA+TGG 0.378755 1.4:+70087417 None:intergenic
GTTTGAACAGTTCCAACTTT+CGG 0.386865 1.4:+70087714 None:intergenic
TATTGAATTCATGAACTTAC+GGG 0.391914 1.4:+70089148 None:intergenic
ACCCTGCTGGTTGGCATGAA+TGG 0.394563 1.4:-70087620 MS.gene07234:CDS
GCAACTGCTTGGTGTTTGCT+TGG 0.397641 1.4:+70088029 None:intergenic
CACTTCTCATTGCAACTGCT+TGG 0.401773 1.4:+70088018 None:intergenic
GACCTTCCAAACATGTTTGT+TGG 0.404138 1.4:+70088934 None:intergenic
TATCGAGAATGCGATATATA+CGG 0.406490 1.4:-70087915 MS.gene07234:CDS
GTTGACTTCATATTTGGAAA+TGG 0.407911 1.4:-70087888 MS.gene07234:CDS
GGAGACCACAATGTTGTTGA+TGG 0.408728 1.4:-70088420 MS.gene07234:CDS
TTTGTCTCAATCCACAATTC+GGG 0.413019 1.4:-70089099 MS.gene07234:CDS
ACATTCAATTCAGCCACATT+TGG 0.413259 1.4:-70088390 MS.gene07234:intron
GCTTTATTTGACATCTTCAA+TGG 0.419717 1.4:+70088732 None:intergenic
AGATTGATTTGTTGTTGTAT+AGG 0.420233 1.4:+70089022 None:intergenic
TTCAAAGCTACAACTATAGA+AGG 0.420977 1.4:+70087980 None:intergenic
CTATTGAATTCATGAACTTA+CGG 0.421755 1.4:+70089147 None:intergenic
AAGTCTTCTGCTTGAGAAGT+TGG 0.427453 1.4:+70088987 None:intergenic
ATTTCTTGAGTGGTGATGAT+TGG 0.428264 1.4:-70087458 MS.gene07234:CDS
GAACAAGATCGAAAGTAGAT+AGG 0.433031 1.4:+70089322 None:intergenic
TTCCATTCATGCCAACCAGC+AGG 0.438837 1.4:+70087618 None:intergenic
ATTCTTTCCACGGTCTTCCT+AGG 0.445831 1.4:+70087688 None:intergenic
CATTGTATACACATTCTCTA+AGG 0.446591 1.4:-70087944 MS.gene07234:CDS
TTTACAATAAGTAGGGTTTA+CGG 0.448955 1.4:+70089244 None:intergenic
TGGCCTGGTTATCATGTTAT+CGG 0.452691 1.4:-70087513 MS.gene07234:CDS
ATTGTCGTTGTTAGTCAAGA+TGG 0.461728 1.4:-70088624 MS.gene07234:CDS
GTATCATTCCATGTAGCAAA+TGG 0.462739 1.4:-70089296 MS.gene07234:CDS
TTAAATTTGCTTACCAAATG+TGG 0.464595 1.4:+70088377 None:intergenic
ATACTCTTGATACACACCTT+TGG 0.465883 1.4:+70088512 None:intergenic
ACCCTAGCCTTGTTCAAGAA+AGG 0.466853 1.4:-70088831 MS.gene07234:CDS
GAACTTACGGGATTGCGATA+AGG 0.466990 1.4:+70089160 None:intergenic
GATGATTTGGCTCCGAAAGT+TGG 0.467758 1.4:-70087726 MS.gene07234:CDS
AGCCTTGTTCAAGAAAGGTT+GGG 0.473203 1.4:-70088826 MS.gene07234:CDS
TCAATAGACTCACAACTTCA+AGG 0.474105 1.4:-70089131 MS.gene07234:CDS
TAGCCTTGTTCAAGAAAGGT+TGG 0.480777 1.4:-70088827 MS.gene07234:CDS
TACCGATGCAGCCAATTTCA+CGG 0.481016 1.4:-70087487 MS.gene07234:CDS
GTGGAACACCATTTGCTACA+TGG 0.489190 1.4:+70089288 None:intergenic
ATCAACAACATTGTGGTCTC+CGG 0.489800 1.4:+70088422 None:intergenic
AACCTTTCTTGAACAAGGCT+AGG 0.499650 1.4:+70088829 None:intergenic
CACCGTGAAATTGGCTGCAT+CGG 0.500180 1.4:+70087485 None:intergenic
AAAAGGTACTTGATGATGGT+TGG 0.503501 1.4:-70088471 MS.gene07234:CDS
AAACAAAAGGTACTTGATGA+TGG 0.504392 1.4:-70088475 MS.gene07234:CDS
ATGATTCTGCTAGACGCAAT+GGG 0.504675 1.4:-70088698 MS.gene07234:CDS
AGCTACTGCGTCATTGATAG+TGG 0.505172 1.4:+70088587 None:intergenic
TGTTTGTTGGTTAGTCAAAA+CGG 0.505795 1.4:+70088947 None:intergenic
GACCGTGGAAAGAATATTCA+AGG 0.508246 1.4:-70087680 MS.gene07234:CDS
TATCCTCGCCTTCCGCTAAG+TGG 0.509384 1.4:-70087837 MS.gene07234:CDS
TTCTTCATATTTATCACCAA+AGG 0.513617 1.4:-70088528 MS.gene07234:CDS
TATGATTCTGCTAGACGCAA+TGG 0.514899 1.4:-70088699 MS.gene07234:CDS
GTCCTTGAATATTCTTTCCA+CGG 0.519966 1.4:+70087678 None:intergenic
GACAGTTTCATAAACCCTGC+TGG 0.520411 1.4:-70087633 MS.gene07234:CDS
TCTATAGTTGTAGCTTTGAA+GGG 0.521345 1.4:-70087977 MS.gene07234:CDS
ATAACATTTCGCAACACCGC+TGG 0.525873 1.4:-70088053 MS.gene07234:CDS
ACTTTGTACTATGCAGAATA+CGG 0.531445 1.4:-70087576 MS.gene07234:CDS
AGGCCATGTCACTCGATTCA+CGG 0.531644 1.4:+70087530 None:intergenic
AGTTCGACCTTGAGCAGTGA+TGG 0.533091 1.4:+70087803 None:intergenic
AATAACACGGTTGCTAGTGA+TGG 0.541511 1.4:-70088555 MS.gene07234:CDS
GAATACGGCAACAGAGGAGC+GGG 0.544190 1.4:-70087561 MS.gene07234:CDS
GTTTACGGTAGAGCTGCAAA+TGG 0.544890 1.4:+70089259 None:intergenic
CAAGCAGTTGCAATGAGAAG+TGG 0.548536 1.4:-70088017 MS.gene07234:CDS
AACCAACAAACATGTTTGGA+AGG 0.550080 1.4:-70088936 MS.gene07234:CDS
GAGTATGGAACACCAGTTTG+AGG 0.551293 1.4:+70087432 None:intergenic
GATGATTGGATTCCTCAAAC+TGG 0.552199 1.4:-70087444 MS.gene07234:CDS
TTCAATTCCATCACTGCTCA+AGG 0.554113 1.4:-70087810 MS.gene07234:CDS
ACTGGTGTTCCATACTCTAG+TGG 0.555255 1.4:-70087426 MS.gene07234:CDS
ACGGTGTCCAATTTCTTGAG+TGG 0.555293 1.4:-70087468 MS.gene07234:CDS
TACTTGATGATGGTTGGAGA+GGG 0.557341 1.4:-70088465 MS.gene07234:CDS
ACCTTTCTTGAACAAGGCTA+GGG 0.557941 1.4:+70088830 None:intergenic
TTTCAGTCGTCGTTGGTCAA+GGG 0.558728 1.4:-70088091 MS.gene07234:intron
GAATTGAATTGTCCACTTAG+CGG 0.559760 1.4:+70087825 None:intergenic
GTTGTTAGTCAAGATGGAAG+TGG 0.562167 1.4:-70088618 MS.gene07234:CDS
ATCTTCAAGAGCCCGAATTG+TGG 0.568143 1.4:+70089088 None:intergenic
GTGAATCGAGTGACATGGCC+TGG 0.573051 1.4:-70087528 MS.gene07234:CDS
AAAGTAAAATAAGAACATCA+TGG 0.577883 1.4:-70088797 MS.gene07234:CDS
ATCAATCAAACAGTTATCAC+CGG 0.578637 1.4:-70088441 MS.gene07234:CDS
ACTGATCCAAATCAAAACAC+TGG 0.582550 1.4:-70087783 MS.gene07234:CDS
GTTTCATAAACCCTGCTGGT+TGG 0.584669 1.4:-70087629 MS.gene07234:CDS
TCCATTCATGCCAACCAGCA+GGG 0.585336 1.4:+70087619 None:intergenic
TTGGTGTTTGCTTGGTCCAG+CGG 0.591249 1.4:+70088037 None:intergenic
AACCCAACCTTTCTTGAACA+AGG 0.595250 1.4:+70088824 None:intergenic
TGAATTGTCCACTTAGCGGA+AGG 0.605583 1.4:+70087829 None:intergenic
GGAACTGTTCAAACATACCT+AGG 0.606114 1.4:-70087705 MS.gene07234:CDS
GAGCTGCAAATGGTTTCTGG+TGG 0.615495 1.4:+70089269 None:intergenic
GTACTTGATGATGGTTGGAG+AGG 0.618787 1.4:-70088466 MS.gene07234:CDS
TGTCCACTTAGCGGAAGGCG+AGG 0.623788 1.4:+70087834 None:intergenic
AAAGCTACAACTATAGAAGG+TGG 0.633511 1.4:+70087983 None:intergenic
ATTCAAAACTCAATTCAGCA+AGG 0.638769 1.4:+70089057 None:intergenic
GCTGGTTGGCATGAATGGAA+TGG 0.651490 1.4:-70087615 MS.gene07234:CDS
GCACCGTGAATCGAGTGACA+TGG 0.652496 1.4:-70087533 MS.gene07234:CDS
GCACCGATAACATGATAACC+AGG 0.655111 1.4:+70087510 None:intergenic
TATGCAGAATACGGCAACAG+AGG 0.658760 1.4:-70087567 MS.gene07234:CDS
AGAATACGGCAACAGAGGAG+CGG 0.660300 1.4:-70087562 MS.gene07234:CDS
AGCTGCTGCACCAAATAACA+CGG 0.675314 1.4:-70088568 MS.gene07234:CDS
TGAAACCATCAACAACATTG+TGG 0.688631 1.4:+70088415 None:intergenic
TACTAATGAAGATAGTGTTG+TGG 0.688812 1.4:-70088655 MS.gene07234:CDS
AAACATACCTAGGAAGACCG+TGG 0.695141 1.4:-70087695 MS.gene07234:CDS
ATAGACTCACAACTTCAAGG+AGG 0.766722 1.4:-70089128 MS.gene07234:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATACTATTAACAAAAAA+TGG - chr1.4:70088424-70088443 MS.gene07234:CDS 10.0%
!!! ATATTTTATATTGTGATTTA+TGG - chr1.4:70088591-70088610 MS.gene07234:CDS 10.0%
!! TCAAATATACGTTTAAAAAT+CGG + chr1.4:70088456-70088475 None:intergenic 15.0%
!! AAAGTAAAATAAGAACATCA+TGG - chr1.4:70087966-70087985 MS.gene07234:CDS 20.0%
!! AAGCATTTGAATTTCAAAAA+TGG - chr1.4:70088001-70088020 MS.gene07234:CDS 20.0%
!! TTAAACGTATATTTGATGAA+TGG - chr1.4:70088460-70088479 MS.gene07234:CDS 20.0%
!!! AATACGTTTTTACAATAAGT+AGG + chr1.4:70087530-70087549 None:intergenic 20.0%
!!! ATAAATGTTTCCATTTTGAT+TGG + chr1.4:70087555-70087574 None:intergenic 20.0%
!!! ATACGTTTTTACAATAAGTA+GGG + chr1.4:70087529-70087548 None:intergenic 20.0%
!!! GATGTTCTTATTTTACTTTT+AGG + chr1.4:70087965-70087984 None:intergenic 20.0%
! AATGGAAACATTTATGACTA+TGG - chr1.4:70087560-70087579 MS.gene07234:CDS 25.0%
! CTATTGAATTCATGAACTTA+CGG + chr1.4:70087619-70087638 None:intergenic 25.0%
! TATCTATACCCAAAAACAAA+AGG - chr1.4:70088275-70088294 MS.gene07234:intron 25.0%
! TATTGAATTCATGAACTTAC+GGG + chr1.4:70087618-70087637 None:intergenic 25.0%
! TGGTAAGCAAATTTAATACT+TGG - chr1.4:70088393-70088412 MS.gene07234:CDS 25.0%
! TTAGCAATCATTGTAAAAGT+CGG + chr1.4:70088521-70088540 None:intergenic 25.0%
! TTCTTCATATTTATCACCAA+AGG - chr1.4:70088235-70088254 MS.gene07234:intron 25.0%
! TTTACAATAAGTAGGGTTTA+CGG + chr1.4:70087522-70087541 None:intergenic 25.0%
!! AGTTTTTATGCAATCTTTCA+TGG - chr1.4:70089108-70089127 MS.gene07234:CDS 25.0%
!! CTTTTACAATGATTGCTAAA+AGG - chr1.4:70088522-70088541 MS.gene07234:CDS 25.0%
!! GTTACAATTTTGCAAAACAA+CGG + chr1.4:70088903-70088922 None:intergenic 25.0%
!! TTAAATTTGCTTACCAAATG+TGG + chr1.4:70088389-70088408 None:intergenic 25.0%
!!! AGATTGATTTGTTGTTGTAT+AGG + chr1.4:70087744-70087763 None:intergenic 25.0%
!!! ATCAAGTACCTTTTGTTTTT+GGG + chr1.4:70088286-70088305 None:intergenic 25.0%
AACGTATTTGCCAATCAAAA+TGG - chr1.4:70087542-70087561 MS.gene07234:CDS 30.0%
ACTTTGTACTATGCAGAATA+CGG - chr1.4:70089187-70089206 MS.gene07234:CDS 30.0%
ATCAATCAAACAGTTATCAC+CGG - chr1.4:70088322-70088341 MS.gene07234:intron 30.0%
ATTCAAAACTCAATTCAGCA+AGG + chr1.4:70087709-70087728 None:intergenic 30.0%
CATTGTATACACATTCTCTA+AGG - chr1.4:70088819-70088838 MS.gene07234:CDS 30.0%
TACTAATGAAGATAGTGTTG+TGG - chr1.4:70088108-70088127 MS.gene07234:intron 30.0%
TATATCAATCCACTAGAGTA+TGG + chr1.4:70089349-70089368 None:intergenic 30.0%
TATCGAGAATGCGATATATA+CGG - chr1.4:70088848-70088867 MS.gene07234:CDS 30.0%
TATTAAAGCAGCAGATGATT+TGG - chr1.4:70089024-70089043 MS.gene07234:CDS 30.0%
TTCAAAGCTACAACTATAGA+AGG + chr1.4:70088786-70088805 None:intergenic 30.0%
! GTTGACTTCATATTTGGAAA+TGG - chr1.4:70088875-70088894 MS.gene07234:CDS 30.0%
! TGTTTGTTGGTTAGTCAAAA+CGG + chr1.4:70087819-70087838 None:intergenic 30.0%
!! AAACAAAAGGTACTTGATGA+TGG - chr1.4:70088288-70088307 MS.gene07234:intron 30.0%
!! GCTTTATTTGACATCTTCAA+TGG + chr1.4:70088034-70088053 None:intergenic 30.0%
!! TCTATAGTTGTAGCTTTGAA+GGG - chr1.4:70088786-70088805 MS.gene07234:CDS 30.0%
!! TTCTATAGTTGTAGCTTTGA+AGG - chr1.4:70088785-70088804 MS.gene07234:CDS 30.0%
!!! CATCAAGTACCTTTTGTTTT+TGG + chr1.4:70088287-70088306 None:intergenic 30.0%
AAAGCTACAACTATAGAAGG+TGG + chr1.4:70088783-70088802 None:intergenic 35.0%
AACCAACAAACATGTTTGGA+AGG - chr1.4:70087827-70087846 MS.gene07234:CDS 35.0%
ACATTCAATTCAGCCACATT+TGG - chr1.4:70088373-70088392 MS.gene07234:intron 35.0%
ACTGATCCAAATCAAAACAC+TGG - chr1.4:70088980-70088999 MS.gene07234:CDS 35.0%
ATACTCTTGATACACACCTT+TGG + chr1.4:70088254-70088273 None:intergenic 35.0%
ATCATCACCACTCAAGAAAT+TGG + chr1.4:70089305-70089324 None:intergenic 35.0%
ATTGTCGTTGTTAGTCAAGA+TGG - chr1.4:70088139-70088158 MS.gene07234:intron 35.0%
CTTTGTCTCAATCCACAATT+CGG - chr1.4:70087663-70087682 MS.gene07234:CDS 35.0%
GAACAAGATCGAAAGTAGAT+AGG + chr1.4:70087444-70087463 None:intergenic 35.0%
GAATTGAATTGTCCACTTAG+CGG + chr1.4:70088941-70088960 None:intergenic 35.0%
GACTAACCAACAAACATGTT+TGG - chr1.4:70087823-70087842 MS.gene07234:CDS 35.0%
GTATCATTCCATGTAGCAAA+TGG - chr1.4:70087467-70087486 MS.gene07234:CDS 35.0%
GTCCTTGAATATTCTTTCCA+CGG + chr1.4:70089088-70089107 None:intergenic 35.0%
GTTTGAACAGTTCCAACTTT+CGG + chr1.4:70089052-70089071 None:intergenic 35.0%
TCAATAGACTCACAACTTCA+AGG - chr1.4:70087632-70087651 MS.gene07234:CDS 35.0%
TGAAACCATCAACAACATTG+TGG + chr1.4:70088351-70088370 None:intergenic 35.0%
TTTGTCTCAATCCACAATTC+GGG - chr1.4:70087664-70087683 MS.gene07234:CDS 35.0%
! ATTTCTTGAGTGGTGATGAT+TGG - chr1.4:70089305-70089324 MS.gene07234:CDS 35.0%
! GGAACAGTTGACTTCATATT+TGG - chr1.4:70088869-70088888 MS.gene07234:CDS 35.0%
!! AAAAGGTACTTGATGATGGT+TGG - chr1.4:70088292-70088311 MS.gene07234:intron 35.0%
!!! GAAGTTCCAGTGTTTTGATT+TGG + chr1.4:70088989-70089008 None:intergenic 35.0%
!!! TTCAAATGCTTGCCATTTTG+TGG + chr1.4:70087992-70088011 None:intergenic 35.0%
AACCCAACCTTTCTTGAACA+AGG + chr1.4:70087942-70087961 None:intergenic 40.0%
AACCTTTCTTGAACAAGGCT+AGG + chr1.4:70087937-70087956 None:intergenic 40.0%
AAGTCTTCTGCTTGAGAAGT+TGG + chr1.4:70087779-70087798 None:intergenic 40.0%
AATAACACGGTTGCTAGTGA+TGG - chr1.4:70088208-70088227 MS.gene07234:intron 40.0%
ACCTTTCTTGAACAAGGCTA+GGG + chr1.4:70087936-70087955 None:intergenic 40.0%
AGAACATCATGGCCACAAAA+TGG - chr1.4:70087977-70087996 MS.gene07234:CDS 40.0%
ATAGACTCACAACTTCAAGG+AGG - chr1.4:70087635-70087654 MS.gene07234:CDS 40.0%
ATCAACAACATTGTGGTCTC+CGG + chr1.4:70088344-70088363 None:intergenic 40.0%
ATGATTCTGCTAGACGCAAT+GGG - chr1.4:70088065-70088084 MS.gene07234:CDS 40.0%
GAAATTGGACACCGTGAAAT+TGG + chr1.4:70089290-70089309 None:intergenic 40.0%
GACCGTGGAAAGAATATTCA+AGG - chr1.4:70089083-70089102 MS.gene07234:CDS 40.0%
GACCTTCCAAACATGTTTGT+TGG + chr1.4:70087832-70087851 None:intergenic 40.0%
GATGATTGGATTCCTCAAAC+TGG - chr1.4:70089319-70089338 MS.gene07234:CDS 40.0%
GGAACTGTTCAAACATACCT+AGG - chr1.4:70089058-70089077 MS.gene07234:CDS 40.0%
GTTGTTAGTCAAGATGGAAG+TGG - chr1.4:70088145-70088164 MS.gene07234:intron 40.0%
TATGATTCTGCTAGACGCAA+TGG - chr1.4:70088064-70088083 MS.gene07234:CDS 40.0%
TGGCCTGGTTATCATGTTAT+CGG - chr1.4:70089250-70089269 MS.gene07234:CDS 40.0%
TTCAATTCCATCACTGCTCA+AGG - chr1.4:70088953-70088972 MS.gene07234:CDS 40.0%
! TCACTAGCAACCGTGTTATT+TGG + chr1.4:70088208-70088227 None:intergenic 40.0%
! TGTGAATTTTCAGTCGTCGT+TGG - chr1.4:70088665-70088684 MS.gene07234:CDS 40.0%
!! AGCCTTGTTCAAGAAAGGTT+GGG - chr1.4:70087937-70087956 MS.gene07234:CDS 40.0%
!! TACTTGATGATGGTTGGAGA+GGG - chr1.4:70088298-70088317 MS.gene07234:intron 40.0%
!! TAGCCTTGTTCAAGAAAGGT+TGG - chr1.4:70087936-70087955 MS.gene07234:CDS 40.0%
!! TTGTAGCTTTGAAGGGTATC+AGG - chr1.4:70088793-70088812 MS.gene07234:CDS 40.0%
AAACATACCTAGGAAGACCG+TGG - chr1.4:70089068-70089087 MS.gene07234:CDS 45.0%
ACGGTGTCCAATTTCTTGAG+TGG - chr1.4:70089295-70089314 MS.gene07234:CDS 45.0%
ACTGGTGTTCCATACTCTAG+TGG - chr1.4:70089337-70089356 MS.gene07234:CDS 45.0%
AGCTACTGCGTCATTGATAG+TGG + chr1.4:70088179-70088198 None:intergenic 45.0%
AGCTGCTGCACCAAATAACA+CGG - chr1.4:70088195-70088214 MS.gene07234:intron 45.0%
ATAACATTTCGCAACACCGC+TGG - chr1.4:70088710-70088729 MS.gene07234:CDS 45.0%
ATCTTCAAGAGCCCGAATTG+TGG + chr1.4:70087678-70087697 None:intergenic 45.0%
ATTCTTTCCACGGTCTTCCT+AGG + chr1.4:70089078-70089097 None:intergenic 45.0%
CAAGCAGTTGCAATGAGAAG+TGG - chr1.4:70088746-70088765 MS.gene07234:CDS 45.0%
CACTTCTCATTGCAACTGCT+TGG + chr1.4:70088748-70088767 None:intergenic 45.0%
GAACTTACGGGATTGCGATA+AGG + chr1.4:70087606-70087625 None:intergenic 45.0%
GACAGTTTCATAAACCCTGC+TGG - chr1.4:70089130-70089149 MS.gene07234:CDS 45.0%
GAGTATGGAACACCAGTTTG+AGG + chr1.4:70089334-70089353 None:intergenic 45.0%
GGAGACCACAATGTTGTTGA+TGG - chr1.4:70088343-70088362 MS.gene07234:intron 45.0%
GTAGAGCTGCAAATGGTTTC+TGG + chr1.4:70087500-70087519 None:intergenic 45.0%
GTTTACGGTAGAGCTGCAAA+TGG + chr1.4:70087507-70087526 None:intergenic 45.0%
GTTTCATAAACCCTGCTGGT+TGG - chr1.4:70089134-70089153 MS.gene07234:CDS 45.0%
TACCGATGCAGCCAATTTCA+CGG - chr1.4:70089276-70089295 MS.gene07234:CDS 45.0%
TATGCAGAATACGGCAACAG+AGG - chr1.4:70089196-70089215 MS.gene07234:CDS 45.0%
TGAATTGTCCACTTAGCGGA+AGG + chr1.4:70088937-70088956 None:intergenic 45.0%
TTTCAGTCGTCGTTGGTCAA+GGG - chr1.4:70088672-70088691 MS.gene07234:CDS 45.0%
! GATGATTTGGCTCCGAAAGT+TGG - chr1.4:70089037-70089056 MS.gene07234:CDS 45.0%
! GCACCGATAACATGATAACC+AGG + chr1.4:70089256-70089275 None:intergenic 45.0%
! GTGGAACACCATTTGCTACA+TGG + chr1.4:70087478-70087497 None:intergenic 45.0%
! TTTTCAGTCGTCGTTGGTCA+AGG - chr1.4:70088671-70088690 MS.gene07234:CDS 45.0%
!! ACCCTAGCCTTGTTCAAGAA+AGG - chr1.4:70087932-70087951 MS.gene07234:CDS 45.0%
!! GTACTTGATGATGGTTGGAG+AGG - chr1.4:70088297-70088316 MS.gene07234:intron 45.0%
AGAATACGGCAACAGAGGAG+CGG - chr1.4:70089201-70089220 MS.gene07234:CDS 50.0%
AGGCCATGTCACTCGATTCA+CGG + chr1.4:70089236-70089255 None:intergenic 50.0%
AGTTCGACCTTGAGCAGTGA+TGG + chr1.4:70088963-70088982 None:intergenic 50.0%
CACCGTGAAATTGGCTGCAT+CGG + chr1.4:70089281-70089300 None:intergenic 50.0%
GCTGGTTGGCATGAATGGAA+TGG - chr1.4:70089148-70089167 MS.gene07234:CDS 50.0%
TCCATTCATGCCAACCAGCA+GGG + chr1.4:70089147-70089166 None:intergenic 50.0%
TTCCATTCATGCCAACCAGC+AGG + chr1.4:70089148-70089167 None:intergenic 50.0%
! GAGCTGCAAATGGTTTCTGG+TGG + chr1.4:70087497-70087516 None:intergenic 50.0%
! TTGGTGTTTGCTTGGTCCAG+CGG + chr1.4:70088729-70088748 None:intergenic 50.0%
!! GCAACTGCTTGGTGTTTGCT+TGG + chr1.4:70088737-70088756 None:intergenic 50.0%
GAATACGGCAACAGAGGAGC+GGG - chr1.4:70089202-70089221 MS.gene07234:CDS 55.0%
GCACCGTGAATCGAGTGACA+TGG - chr1.4:70089230-70089249 MS.gene07234:CDS 55.0%
GTGAATCGAGTGACATGGCC+TGG - chr1.4:70089235-70089254 MS.gene07234:CDS 55.0%
TATCCTCGCCTTCCGCTAAG+TGG - chr1.4:70088926-70088945 MS.gene07234:CDS 55.0%
! ACCCTGCTGGTTGGCATGAA+TGG - chr1.4:70089143-70089162 MS.gene07234:CDS 55.0%
TGTCCACTTAGCGGAAGGCG+AGG + chr1.4:70088932-70088951 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 70087416 70089369 70087416 ID=MS.gene07234
chr1.4 mRNA 70087416 70089369 70087416 ID=MS.gene07234.t1;Parent=MS.gene07234
chr1.4 exon 70088391 70089369 70088391 ID=MS.gene07234.t1.exon1;Parent=MS.gene07234.t1
chr1.4 CDS 70088391 70089369 70088391 ID=cds.MS.gene07234.t1;Parent=MS.gene07234.t1
chr1.4 exon 70087416 70088107 70087416 ID=MS.gene07234.t1.exon2;Parent=MS.gene07234.t1
chr1.4 CDS 70087416 70088107 70087416 ID=cds.MS.gene07234.t1;Parent=MS.gene07234.t1
Gene Sequence

>MS.gene07234

ATGGCTCTCAAACACAAAACTATTGCCTATCTACTTTCGATCTTGTTCTTTGTATCATTCCATGTAGCAAATGGTGTTCCACCAGAAACCATTTGCAGCTCTACCGTAAACCCTACTTATTGTAAAAACGTATTTGCCAATCAAAATGGAAACATTTATGACTATGGTAAAATTTCAATTCGAAAATCCTTATCGCAATCCCGTAAGTTCATGAATTCAATAGACTCACAACTTCAAGGAGGTTCATCTTTGTCTCAATCCACAATTCGGGCTCTTGAAGATTGTCGATTCCTTGCTGAATTGAGTTTTGAATACTTATCAAACACCTATACAACAACAAATCAATCTAGTAATGTTCTTCCAACTTCTCAAGCAGAAGACTTTGAAACTTTTCTAAGTGCCGTTTTGACTAACCAACAAACATGTTTGGAAGGTCTAAACACTATAGCTTCTGATCAGAGAGTGAAGAACGACTTAACGTCATCGATCTCTGATGACATGAAGCTTCATAGTGTCACCCTAGCCTTGTTCAAGAAAGGTTGGGTTCCTAAAAGTAAAATAAGAACATCATGGCCACAAAATGGCAAGCATTTGAATTTCAAAAATGGTCGTTTGCCATTGAAGATGTCAAATAAAGCACGTGCTATTTATGATTCTGCTAGACGCAATGGGAGAAAACTACTTCAAACTAATACTAATGAAGATAGTGTTGTGGTGAGTGATATTGTCGTTGTTAGTCAAGATGGAAGTGGAAACTTTACCACTATCAATGACGCAGTAGCTGCTGCACCAAATAACACGGTTGCTAGTGATGGATACTTCTTCATATTTATCACCAAAGGTGTGTATCAAGAGTATGTATCTATACCCAAAAACAAAAGGTACTTGATGATGGTTGGAGAGGGAATCAATCAAACAGTTATCACCGGAGACCACAATGTTGTTGATGGTTTCACAACATTCAATTCAGCCACATTTGGTAAGCAAATTTAATACTTGGACATATTAAATATACTATTAACAAAAAATGGTATATACCGATTTTTAAACGTATATTTGATGAATGGTTTGAAAATTTTGTCGCTAATGTGATTGAAAATTTCCGACTTTTACAATGATTGCTAAAAGGCAATTTTTTTTTTTAGTTTACAATTACTCACACAAATAGTGTTAATATATTTTATATTGTGATTTATGGCATGCATGAAGATAATCTATATGTTAAAAATTTCACAAATTTGACGTTTCTTGTGAATTTTCAGTCGTCGTTGGTCAAGGGTTCGTAGCAGTTAACATAACATTTCGCAACACCGCTGGACCAAGCAAACACCAAGCAGTTGCAATGAGAAGTGGAGCAGATATGTCCACCTTCTATAGTTGTAGCTTTGAAGGGTATCAGGACACATTGTATACACATTCTCTAAGGCAGTTTTATCGAGAATGCGATATATACGGAACAGTTGACTTCATATTTGGAAATGGTGCCGTTGTTTTGCAAAATTGTAACATTTATCCTCGCCTTCCGCTAAGTGGACAATTCAATTCCATCACTGCTCAAGGTCGAACTGATCCAAATCAAAACACTGGAACTTCTATACAAAATGCAACTATTAAAGCAGCAGATGATTTGGCTCCGAAAGTTGGAACTGTTCAAACATACCTAGGAAGACCGTGGAAAGAATATTCAAGGACAGTTTTTATGCAATCTTTCATGGACAGTTTCATAAACCCTGCTGGTTGGCATGAATGGAATGGTGATTTTGCATTGAATACTTTGTACTATGCAGAATACGGCAACAGAGGAGCGGGTTCAAGCACCGTGAATCGAGTGACATGGCCTGGTTATCATGTTATCGGTGCTACCGATGCAGCCAATTTCACGGTGTCCAATTTCTTGAGTGGTGATGATTGGATTCCTCAAACTGGTGTTCCATACTCTAGTGGATTGATATAG
Protein sequence

>MS.gene07234.t1

MALKHKTIAYLLSILFFVSFHVANGVPPETICSSTVNPTYCKNVFANQNGNIYDYGKISIRKSLSQSRKFMNSIDSQLQGGSSLSQSTIRALEDCRFLAELSFEYLSNTYTTTNQSSNVLPTSQAEDFETFLSAVLTNQQTCLEGLNTIASDQRVKNDLTSSISDDMKLHSVTLALFKKGWVPKSKIRTSWPQNGKHLNFKNGRLPLKMSNKARAIYDSARRNGRKLLQTNTNEDSVVVSDIVVVSQDGSGNFTTINDAVAAAPNNTVASDGYFFIFITKGVYQEYVSIPKNKRYLMMVGEGINQTVITGDHNVVDGFTTFNSATFVVVGQGFVAVNITFRNTAGPSKHQAVAMRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNGAVVLQNCNIYPRLPLSGQFNSITAQGRTDPNQNTGTSIQNATIKAADDLAPKVGTVQTYLGRPWKEYSRTVFMQSFMDSFINPAGWHEWNGDFALNTLYYAEYGNRGAGSSTVNRVTWPGYHVIGATDAANFTVSNFLSGDDWIPQTGVPYSSGLI