AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034563

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034563.t1 MTR_1g054880 94.812 559 29 0 1 559 1 559 0.0 1082
MS.gene034563.t1 MTR_1g088020 86.631 561 68 2 1 559 1 556 0.0 989
MS.gene034563.t1 MTR_1g088225 86.096 561 69 3 1 559 1 554 0.0 975
MS.gene034563.t1 MTR_7g108890 73.357 563 146 3 1 559 1 563 0.0 859
MS.gene034563.t1 MTR_0458s0010 73.890 563 99 7 1 559 1 519 0.0 793
MS.gene034563.t1 MTR_7g108875 66.606 554 172 5 16 559 15 565 0.0 764
MS.gene034563.t1 MTR_7g108900 66.855 531 171 4 31 558 32 560 0.0 738
MS.gene034563.t1 MTR_1g083520 50.733 546 237 8 17 558 11 528 0.0 529
MS.gene034563.t1 MTR_0458s0030 91.386 267 23 0 293 559 49 315 0.0 521
MS.gene034563.t1 MTR_0458s0030 62.500 56 16 1 1 56 1 51 1.88e-14 75.1
MS.gene034563.t1 MTR_1g088040 91.386 267 23 0 293 559 49 315 0.0 521
MS.gene034563.t1 MTR_1g088040 62.500 56 16 1 1 56 1 51 1.88e-14 75.1
MS.gene034563.t1 MTR_3g010770 50.459 545 241 9 37 559 39 576 5.95e-179 517
MS.gene034563.t1 MTR_8g042910 50.929 538 245 6 37 558 78 612 9.03e-179 518
MS.gene034563.t1 MTR_7g108905 51.245 482 204 10 83 558 100 556 1.42e-155 457
MS.gene034563.t1 MTR_4g025690 45.633 561 241 16 8 558 7 513 3.10e-143 424
MS.gene034563.t1 MTR_4g025730 47.410 502 210 15 59 558 60 509 4.42e-139 413
MS.gene034563.t1 MTR_1g008140 47.390 479 218 8 96 558 147 607 4.35e-138 414
MS.gene034563.t1 MTR_2g044810 42.049 566 273 12 10 558 7 534 2.55e-134 401
MS.gene034563.t1 MTR_2g044880 46.281 484 207 9 85 558 85 525 1.51e-133 399
MS.gene034563.t1 MTR_7g050980 46.512 473 204 12 96 558 122 555 4.84e-133 399
MS.gene034563.t1 MTR_8g023310 46.735 490 214 12 88 558 128 589 6.08e-133 400
MS.gene034563.t1 MTR_7g112580 45.629 469 217 10 96 558 106 542 9.10e-133 398
MS.gene034563.t1 MTR_8g042900 45.219 502 240 12 62 558 110 581 9.18e-132 396
MS.gene034563.t1 MTR_4g087980 46.055 469 215 8 93 558 83 516 9.28e-132 394
MS.gene034563.t1 MTR_4g124520 48.019 429 191 8 132 558 123 521 1.27e-131 394
MS.gene034563.t1 MTR_4g025670 44.561 478 217 7 86 558 55 489 1.29e-130 390
MS.gene034563.t1 MTR_3g010780 43.173 498 254 10 62 558 105 574 2.88e-128 387
MS.gene034563.t1 MTR_4g087970 44.770 478 206 9 96 558 83 517 4.10e-128 385
MS.gene034563.t1 MTR_8g104645 55.891 331 142 3 230 558 44 372 5.08e-128 379
MS.gene034563.t1 MTR_3g091380 43.253 541 263 13 37 558 82 597 6.00e-128 387
MS.gene034563.t1 MTR_8g104655 42.545 550 281 11 15 558 21 541 1.69e-127 384
MS.gene034563.t1 MTR_7g050950 40.331 543 261 14 36 558 54 553 2.17e-126 382
MS.gene034563.t1 MTR_7g050870 41.296 540 261 14 36 558 54 554 2.55e-126 382
MS.gene034563.t1 MTR_4g035980 40.824 534 270 14 37 558 40 539 4.30e-122 370
MS.gene034563.t1 MTR_3g033690 40.602 532 265 12 37 558 36 526 1.29e-120 366
MS.gene034563.t1 MTR_7g053360 39.192 569 278 15 8 558 9 527 7.19e-120 364
MS.gene034563.t1 MTR_4g124550 42.549 463 251 6 96 558 146 593 1.50e-119 365
MS.gene034563.t1 MTR_3g008640 39.787 563 283 14 8 558 9 527 3.58e-119 362
MS.gene034563.t1 MTR_3g008700 39.367 569 277 15 8 558 9 527 3.74e-119 362
MS.gene034563.t1 MTR_3g008720 40.485 536 261 14 37 558 36 527 5.22e-119 362
MS.gene034563.t1 MTR_1g086190 37.383 535 301 10 36 558 51 563 2.73e-110 340
MS.gene034563.t1 MTR_8g023150 38.817 541 279 17 34 558 78 582 5.61e-109 338
MS.gene034563.t1 MTR_1g086210 36.563 547 306 11 34 558 42 569 1.94e-107 333
MS.gene034563.t1 MTR_1g083510 39.623 477 259 11 96 557 120 582 4.03e-106 330
MS.gene034563.t1 MTR_2g044810 57.540 252 107 0 307 558 214 465 1.68e-105 325
MS.gene034563.t1 MTR_7g112590 36.127 537 316 9 34 557 60 582 8.09e-103 322
MS.gene034563.t1 MTR_2g044660 50.799 313 147 3 246 558 327 632 2.07e-100 317
MS.gene034563.t1 MTR_8g104580 48.193 332 133 6 230 558 205 500 1.80e-99 310
MS.gene034563.t1 MTR_3g095920 34.570 593 303 16 7 557 14 563 4.27e-98 309
MS.gene034563.t1 MTR_0618s0020 60.088 228 90 1 332 558 1 228 2.71e-97 295
MS.gene034563.t1 MTR_7g110560 35.338 532 317 11 34 559 40 550 2.01e-96 304
MS.gene034563.t1 MTR_1g083490 33.640 544 302 9 34 554 64 571 6.15e-96 304
MS.gene034563.t1 MTR_4g005180 33.640 544 302 9 34 554 46 553 2.98e-95 301
MS.gene034563.t1 MTR_1g083470 36.695 466 265 8 96 554 124 566 3.36e-95 302
MS.gene034563.t1 MTR_1g083500 36.695 466 265 8 96 554 124 566 3.36e-95 302
MS.gene034563.t1 MTR_4g005170 33.640 544 302 9 34 554 64 571 4.00e-95 303
MS.gene034563.t1 MTR_4g120280 38.914 442 231 10 130 557 155 571 1.01e-94 301
MS.gene034563.t1 MTR_8g093460 36.000 525 291 13 37 547 47 540 8.30e-94 298
MS.gene034563.t1 MTR_7g110490 37.131 474 278 9 93 558 105 566 9.76e-94 298
MS.gene034563.t1 MTR_7g110510 37.131 474 278 9 93 558 105 566 9.76e-94 298
MS.gene034563.t1 MTR_4g120290 38.549 441 234 10 130 557 155 571 1.84e-93 297
MS.gene034563.t1 MTR_7g110440 35.881 471 290 6 96 558 108 574 9.52e-92 293
MS.gene034563.t1 MTR_2g436040 32.801 564 325 11 8 554 16 542 2.23e-90 290
MS.gene034563.t1 MTR_5g083620 41.243 354 174 8 230 558 12 356 9.87e-85 268
MS.gene034563.t1 MTR_2g436050 33.519 540 310 13 34 557 57 563 5.33e-83 270
MS.gene034563.t1 MTR_8g088610 40.979 327 183 5 230 554 54 372 2.61e-82 262
MS.gene034563.t1 MTR_7g110420 34.369 483 285 10 96 558 108 578 3.60e-77 255
MS.gene034563.t1 MTR_7g107180 42.902 317 161 8 246 558 7 307 1.61e-74 239
MS.gene034563.t1 MTR_2g105560 41.009 317 165 8 246 558 41 339 9.54e-74 238
MS.gene034563.t1 MTR_7g110430 32.640 481 258 10 96 558 108 540 1.81e-71 238
MS.gene034563.t1 MTR_7g111560 30.467 535 321 13 35 558 62 556 1.19e-70 237
MS.gene034563.t1 MTR_1g086540 33.521 355 203 9 204 547 12 344 9.58e-55 189
MS.gene034563.t1 MTR_6g024165 36.474 329 173 10 231 547 30 334 1.18e-54 188
MS.gene034563.t1 MTR_6g088810 36.393 305 166 6 254 547 90 377 8.05e-52 182
MS.gene034563.t1 MTR_8g102380 35.987 314 171 7 247 547 81 377 1.21e-51 181
MS.gene034563.t1 MTR_6g012800 33.642 324 180 9 245 556 5 305 2.87e-51 178
MS.gene034563.t1 MTR_7g092780 33.974 312 182 6 246 547 90 387 1.07e-48 174
MS.gene034563.t1 MTR_7g011530 33.677 291 169 5 241 521 1 277 1.36e-47 169
MS.gene034563.t1 MTR_6g042660 33.910 289 165 6 238 521 29 296 1.48e-46 166
MS.gene034563.t1 MTR_2g039530 37.987 308 152 11 230 526 40 319 5.52e-45 162
MS.gene034563.t1 MTR_5g083590 30.159 315 167 5 246 559 7 269 1.21e-44 159
MS.gene034563.t1 MTR_7g102600 30.571 350 217 6 210 547 58 393 4.21e-44 161
MS.gene034563.t1 MTR_4g124740 32.268 313 176 8 245 547 53 339 1.24e-43 159
MS.gene034563.t1 MTR_6g042690 32.915 319 184 9 238 547 31 328 3.93e-43 157
MS.gene034563.t1 MTR_2g033970 31.731 312 184 8 246 548 56 347 1.72e-42 155
MS.gene034563.t1 MTR_5g095490 33.117 308 177 7 252 547 67 357 2.54e-42 155
MS.gene034563.t1 MTR_8g102380 37.023 262 136 7 247 495 81 326 8.07e-42 153
MS.gene034563.t1 MTR_5g012600 31.132 318 190 7 245 550 62 362 1.18e-41 154
MS.gene034563.t1 MTR_1g033050 35.211 284 161 5 245 521 17 284 1.44e-41 152
MS.gene034563.t1 MTR_5g093970 32.573 307 190 6 242 547 39 329 6.64e-40 148
MS.gene034563.t1 MTR_5g088300 32.573 307 183 7 242 547 33 316 6.19e-38 142
MS.gene034563.t1 MTR_2g436600 30.671 313 177 11 246 548 55 337 4.70e-37 140
MS.gene034563.t1 MTR_5g088290 30.293 307 191 6 242 547 44 328 3.73e-35 135
MS.gene034563.t1 MTR_4g051810 30.097 309 195 6 241 549 32 319 7.98e-34 131
MS.gene034563.t1 MTR_4g074290 30.671 313 190 8 243 547 68 361 4.47e-33 130
MS.gene034563.t1 MTR_2g073390 31.410 312 185 10 245 547 70 361 8.79e-33 129
MS.gene034563.t1 MTR_8g036225 30.599 317 184 8 245 549 32 324 1.77e-32 127
MS.gene034563.t1 MTR_5g088280 30.065 306 192 6 242 547 35 318 2.37e-32 127
MS.gene034563.t1 MTR_0009s0350 33.684 285 166 8 243 520 68 336 4.33e-32 127
MS.gene034563.t1 MTR_0009s0340 33.684 285 166 8 243 520 68 336 4.33e-32 127
MS.gene034563.t1 MTR_6g025590 36.066 183 98 6 231 403 38 211 1.43e-24 102
MS.gene034563.t1 MTR_0408s0030 35.878 131 70 4 418 547 31 148 3.06e-18 82.4
MS.gene034563.t1 MTR_2g436070 27.273 297 174 12 34 320 57 321 8.29e-16 79.7
MS.gene034563.t1 MTR_6g024200 29.651 172 100 4 377 547 125 276 1.17e-15 77.8
MS.gene034563.t1 MTR_7g102580 46.512 86 36 2 323 403 73 153 1.35e-15 74.7
MS.gene034563.t1 MTR_4g130790 29.167 192 124 5 249 432 25 212 5.07e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034563.t1 AT1G02810 60.727 578 196 9 8 559 6 578 0.0 697
MS.gene034563.t1 AT4G02330 60.420 571 204 10 9 559 4 572 0.0 693
MS.gene034563.t1 AT2G47550 62.082 538 192 7 27 559 29 559 0.0 660
MS.gene034563.t1 AT3G10720 49.351 539 252 9 37 559 83 616 5.79e-172 501
MS.gene034563.t1 AT5G04970 46.875 544 258 9 37 559 88 621 4.24e-165 483
MS.gene034563.t1 AT2G45220 43.525 556 246 14 19 558 8 511 1.62e-139 414
MS.gene034563.t1 AT2G26440 43.446 534 267 11 35 558 39 547 3.41e-136 407
MS.gene034563.t1 AT3G60730 46.313 434 217 7 131 558 96 519 2.89e-132 395
MS.gene034563.t1 AT5G51490 44.511 501 230 9 63 558 79 536 4.56e-131 393
MS.gene034563.t1 AT3G43270 47.122 469 221 9 96 559 80 526 8.36e-131 392
MS.gene034563.t1 AT1G11580 39.451 583 288 12 1 558 15 557 3.43e-130 392
MS.gene034563.t1 AT3G05620 44.259 479 210 8 96 558 104 541 5.35e-130 390
MS.gene034563.t1 AT1G11580 39.451 583 288 12 1 558 36 578 7.39e-130 391
MS.gene034563.t1 AT4G33220 47.046 474 222 10 96 558 68 523 7.67e-130 390
MS.gene034563.t1 AT1G53830 43.017 537 274 11 34 554 63 583 1.69e-127 386
MS.gene034563.t1 AT1G23200 40.657 578 277 17 11 558 13 554 1.29e-125 380
MS.gene034563.t1 AT5G53370 42.115 539 263 13 37 558 79 585 3.61e-125 380
MS.gene034563.t1 AT5G53370 42.115 539 263 13 37 558 115 621 1.09e-124 380
MS.gene034563.t1 AT3G49220 46.560 436 209 8 128 558 180 596 2.11e-124 378
MS.gene034563.t1 AT4G33220 55.193 337 143 3 223 558 73 402 2.88e-124 371
MS.gene034563.t1 AT3G49220 46.560 436 209 8 128 558 225 641 5.53e-124 379
MS.gene034563.t1 AT3G14310 45.567 485 224 11 96 558 126 592 5.98e-124 377
MS.gene034563.t1 AT3G10720 63.462 260 95 0 300 559 1 260 3.58e-123 363
MS.gene034563.t1 AT5G04960 39.332 539 274 13 30 556 65 562 5.67e-123 373
MS.gene034563.t1 AT3G05610 41.189 471 250 5 93 559 119 566 2.17e-121 372
MS.gene034563.t1 AT5G51500 46.404 431 199 9 132 558 138 540 9.19e-120 364
MS.gene034563.t1 AT3G10710 39.587 533 280 11 30 558 67 561 3.85e-119 363
MS.gene034563.t1 AT4G02300 40.868 553 279 13 16 558 18 532 6.93e-119 362
MS.gene034563.t1 AT4G02320 42.566 491 235 11 77 554 58 514 1.83e-116 355
MS.gene034563.t1 AT2G26450 38.246 536 286 12 34 558 110 611 2.12e-116 358
MS.gene034563.t1 AT1G53840 40.688 494 253 12 75 552 112 581 3.33e-115 354
MS.gene034563.t1 AT4G00190 40.684 526 251 15 36 558 7 474 4.74e-115 350
MS.gene034563.t1 AT4G33230 38.462 533 298 10 34 558 96 606 5.34e-114 352
MS.gene034563.t1 AT2G43050 40.779 488 239 8 78 559 74 517 2.15e-113 347
MS.gene034563.t1 AT5G27870 39.362 470 250 6 96 558 121 562 7.23e-113 352
MS.gene034563.t1 AT3G59010 43.953 430 210 7 131 559 130 529 3.78e-110 339
MS.gene034563.t1 AT5G49180 40.756 476 263 6 83 555 108 567 2.58e-108 336
MS.gene034563.t1 AT4G03930 42.657 429 215 6 131 558 126 524 5.90e-105 325
MS.gene034563.t1 AT3G47400 49.851 335 162 4 227 558 263 594 5.03e-104 325
MS.gene034563.t1 AT3G27980 41.628 430 208 6 134 558 106 497 1.16e-102 319
MS.gene034563.t1 AT1G11590 41.958 429 218 7 131 558 126 524 3.14e-101 316
MS.gene034563.t1 AT3G14300 40.426 470 244 11 96 555 525 968 3.59e-101 327
MS.gene034563.t1 AT3G06830 40.492 447 215 8 131 556 150 566 2.31e-100 315
MS.gene034563.t1 AT5G20860 37.051 529 264 15 51 558 58 538 9.07e-99 310
MS.gene034563.t1 AT4G15980 45.122 328 176 2 228 554 374 698 2.60e-86 282
MS.gene034563.t1 AT4G15980 45.122 328 176 2 228 554 384 708 4.46e-86 281
MS.gene034563.t1 AT5G64640 36.555 476 242 13 103 551 160 602 5.02e-86 278
MS.gene034563.t1 AT5G09760 46.519 316 144 8 246 546 267 572 1.17e-85 277
MS.gene034563.t1 AT5G09760 46.519 316 144 8 246 546 241 546 1.18e-85 276
MS.gene034563.t1 AT1G11370 48.837 258 129 1 232 489 32 286 5.18e-83 261
MS.gene034563.t1 AT2G47030 43.810 315 170 4 247 558 278 588 3.83e-78 258
MS.gene034563.t1 AT5G20860 34.990 483 230 12 72 545 90 497 5.69e-78 255
MS.gene034563.t1 AT2G47040 30.872 596 350 13 11 558 14 595 2.27e-76 253
MS.gene034563.t1 AT3G62170 42.857 315 173 4 247 558 278 588 2.66e-74 247
MS.gene034563.t1 AT5G19730 35.032 314 176 6 245 547 85 381 4.33e-52 182
MS.gene034563.t1 AT2G36710 32.951 349 199 7 211 552 70 390 4.84e-51 181
MS.gene034563.t1 AT1G05310 34.451 328 180 7 233 547 83 388 4.21e-50 177
MS.gene034563.t1 AT3G29090 33.837 331 178 11 240 555 1 305 3.80e-49 173
MS.gene034563.t1 AT2G36700 32.792 308 187 5 245 547 41 333 6.07e-49 173
MS.gene034563.t1 AT2G21610 33.003 303 183 6 245 547 50 332 1.76e-48 172
MS.gene034563.t1 AT2G21610 33.003 303 183 6 245 547 55 337 2.25e-48 172
MS.gene034563.t1 AT5G07430 33.544 316 187 7 237 547 58 355 8.37e-46 165
MS.gene034563.t1 AT5G18990 36.426 291 150 7 246 521 29 299 3.64e-45 162
MS.gene034563.t1 AT3G17060 29.375 320 197 7 238 548 38 337 1.71e-44 161
MS.gene034563.t1 AT3G24130 32.609 322 182 7 246 553 34 334 9.09e-44 159
MS.gene034563.t1 AT5G47500 31.746 315 186 7 245 547 60 357 3.28e-43 158
MS.gene034563.t1 AT5G07420 32.686 309 183 8 245 547 66 355 1.86e-41 153
MS.gene034563.t1 AT5G55590 32.075 318 187 7 242 547 78 378 1.52e-39 148
MS.gene034563.t1 AT2G19150 28.875 329 208 6 234 554 29 339 2.54e-39 147
MS.gene034563.t1 AT5G26810 31.975 319 189 9 242 547 30 333 2.70e-37 141
MS.gene034563.t1 AT5G55590 33.840 263 147 6 242 492 78 325 4.14e-37 140
MS.gene034563.t1 AT2G47280 31.056 322 188 8 246 553 35 336 6.28e-37 140
MS.gene034563.t1 AT1G44980 43.716 183 99 2 230 412 63 241 9.65e-37 137
MS.gene034563.t1 AT5G61680 29.570 372 208 12 187 547 30 358 3.81e-36 139
MS.gene034563.t1 AT1G69940 29.773 309 192 8 245 547 66 355 3.84e-36 139
MS.gene034563.t1 AT5G07410 29.773 309 192 8 245 547 66 355 7.11e-36 138
MS.gene034563.t1 AT2G19150 30.970 268 161 5 234 493 29 280 3.33e-34 131
MS.gene034563.t1 AT3G49220 30.097 206 121 7 128 329 225 411 2.25e-16 82.0

Find 103 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTTATATGCAATCCTTTA+TGG 0.127257 1.1:+41418552 MS.gene034563:CDS
CCGTAAGTTTGTGAACTTAT+TGG 0.152481 1.1:+41417009 MS.gene034563:CDS
GGAACAGTTGACTTCATATT+TGG 0.153800 1.1:+41418313 MS.gene034563:CDS
GTACCCTTGCAAATGGTTTC+TGG 0.200233 1.1:-41416890 None:intergenic
AACTGATGAAGATAGTATTT+TGG 0.238098 1.1:+41417495 MS.gene034563:CDS
TTCAAAGCTGCAACTATAAA+AGG 0.248256 1.1:-41418227 None:intergenic
GGATTAAATTGTCCACTTAA+AGG 0.252484 1.1:-41418382 None:intergenic
TTTACAATAAGTAGGGTTTA+TGG 0.266824 1.1:-41416912 None:intergenic
GTTTGAACAGTTCCAACTTT+AGG 0.279022 1.1:-41418493 None:intergenic
TCACTTGCAACTGTGTTATT+TGG 0.293731 1.1:-41417592 None:intergenic
AGAACATCATGGCCACAAAA+AGG 0.293871 1.1:+41417370 MS.gene034563:CDS
ACTTATTGTAAAACCGTTCT+TGG 0.299570 1.1:+41416923 MS.gene034563:CDS
ACCGTTCTTGGTAGTCAAAA+TGG 0.304777 1.1:+41416935 MS.gene034563:CDS
GAATACTTATCAAATACTTA+TGG 0.313182 1.1:+41417118 MS.gene034563:CDS
TGGCCTGGTTATCATGTTAT+TGG 0.321352 1.1:+41418694 MS.gene034563:CDS
GACTAACCAACAAACATGTT+TGG 0.337162 1.1:+41417216 MS.gene034563:CDS
GATAGTTTCATAAACCCTTC+TGG 0.341399 1.1:+41418574 MS.gene034563:CDS
TATTAAACCAGCAGATGATT+TGG 0.346208 1.1:+41418468 MS.gene034563:CDS
ACCCTTCTGGTTGGCGTGAA+TGG 0.353642 1.1:+41418587 MS.gene034563:CDS
AAGAAATACTTAATGATGAT+TGG 0.358837 1.1:+41417679 MS.gene034563:CDS
TATAGAGAATGTGATATCTA+TGG 0.361336 1.1:+41418292 MS.gene034563:CDS
ATCAATCAAACAATTATTAC+AGG 0.371518 1.1:+41417709 MS.gene034563:CDS
AAATCTTCGGCTTGAGAAGC+TGG 0.379722 1.1:-41417169 None:intergenic
AAGGAAAGTTTCAAAATCTT+CGG 0.386339 1.1:-41417182 None:intergenic
ACAGTGTCTAACTTTGTTAG+TGG 0.386747 1.1:+41418739 MS.gene034563:CDS
TCTCGGGCATCCAACCCTTC+AGG 0.388766 1.1:-41417339 None:intergenic
GTTTATGAAACTATCCATAA+AGG 0.390037 1.1:-41418566 None:intergenic
TATCCTCGCCTTCCTTTAAG+TGG 0.400077 1.1:+41418370 MS.gene034563:CDS
GACCATCCAAACATGTTTGT+TGG 0.404138 1.1:-41417222 None:intergenic
TTGATAAGTATTCAAAACTT+AGG 0.406808 1.1:-41417108 None:intergenic
GTTGACTTCATATTTGGAAA+TGG 0.407911 1.1:+41418319 MS.gene034563:CDS
GCTTTATTTGACATCTTCAA+TGG 0.414247 1.1:-41417424 None:intergenic
GTTCACAAACTTACGGGATT+GGG 0.426105 1.1:-41417002 None:intergenic
AATGGAAACATATATGACTA+TGG 0.430610 1.1:+41416953 MS.gene034563:CDS
GAACAAGATTGAAAGTAGAT+AGG 0.433031 1.1:-41416834 None:intergenic
TATATCAATCCACTCATGTA+AGG 0.434854 1.1:-41418790 None:intergenic
CAATAAGTTCACAAACTTAC+GGG 0.436945 1.1:-41417008 None:intergenic
CACTATATACACATTCTTTG+AGG 0.437264 1.1:+41418263 MS.gene034563:CDS
AGTTCACAAACTTACGGGAT+TGG 0.438103 1.1:-41417003 None:intergenic
CCAATAAGTTCACAAACTTA+CGG 0.451950 1.1:-41417009 None:intergenic
ATTGTTGTTGTTAGTCAAGA+TGG 0.454724 1.1:+41417526 MS.gene034563:CDS
ACTTTGTTAGTGGTGATGAT+TGG 0.464508 1.1:+41418749 MS.gene034563:CDS
CACTCTTTGATCAGAAGCTG+TGG 0.465564 1.1:-41417251 None:intergenic
GTTCGACCTTGAGCTGTGAT+AGG 0.465990 1.1:-41418403 None:intergenic
TAGCCTTGTTCCTGAAGGGT+TGG 0.466068 1.1:+41417329 MS.gene034563:CDS
CTATTTGCAGTGCTTGAACC+TGG 0.466600 1.1:-41418664 None:intergenic
GTTCTTGAATATTCTTTCCA+TGG 0.474078 1.1:-41418529 None:intergenic
GATGATTTGGCTCCTAAAGT+TGG 0.474444 1.1:+41418481 MS.gene034563:CDS
AAACTTACGGGATTGGGATA+AGG 0.474593 1.1:-41416996 None:intergenic
GTTTATGGTACCCTTGCAAA+TGG 0.476298 1.1:-41416897 None:intergenic
TTATTGGACTCATATCTTCA+AGG 0.477449 1.1:+41417025 MS.gene034563:CDS
TTTGCAGCTGTGGTTGCTCA+AGG 0.483394 1.1:+41418115 MS.gene034563:intron
GGAAACATACAACTTCATAA+AGG 0.484214 1.1:-41416813 None:intergenic
AACCCTAGCCTTGTTCCTGA+AGG 0.488138 1.1:+41417324 MS.gene034563:CDS
TTAGGAGCCAAATCATCTGC+TGG 0.490137 1.1:-41418475 None:intergenic
TATGCAGAATATGATAATAG+AGG 0.503332 1.1:+41418640 MS.gene034563:CDS
TGTTTGTTGGTTAGTCAAAA+CGG 0.510632 1.1:-41417209 None:intergenic
ACATTCAATTCAGCCACCTT+CGG 0.511026 1.1:+41417760 MS.gene034563:CDS
AGCTATTGCATCATTGATAG+TGG 0.514897 1.1:-41417563 None:intergenic
TATGATTCTGCTAGACGCCA+TGG 0.522383 1.1:+41417457 MS.gene034563:CDS
TGTGGTTGCTCAAGGGTTCG+TGG 0.525099 1.1:+41418123 MS.gene034563:CDS
ATTCTTTCCATGGTCTCCCT+AGG 0.526798 1.1:-41418519 None:intergenic
AACCAACAAACATGTTTGGA+TGG 0.529492 1.1:+41417220 MS.gene034563:CDS
AACCCTTCAGGAACAAGGCT+AGG 0.539952 1.1:-41417327 None:intergenic
TTGCAGCTGTGGTTGCTCAA+GGG 0.540541 1.1:+41418116 MS.gene034563:intron
TAAATTGTCCACTTAAAGGA+AGG 0.540732 1.1:-41418378 None:intergenic
GCAAATAGAGTAACATGGCC+TGG 0.542797 1.1:+41418679 MS.gene034563:CDS
ATAACATTTCGCAACACCGC+TGG 0.545912 1.1:+41418154 MS.gene034563:CDS
TTCCATTCACGCCAACCAGA+AGG 0.547863 1.1:-41418589 None:intergenic
ATTCAAAACTTAGGTTAGCA+AGG 0.548004 1.1:-41417099 None:intergenic
GATGATTGGATTCCTCAAAC+TGG 0.552199 1.1:+41418763 MS.gene034563:CDS
AATAACACAGTTGCAAGTGA+TGG 0.552711 1.1:+41417595 MS.gene034563:CDS
GGAACTGTTCAAACATACCT+AGG 0.552848 1.1:+41418502 MS.gene034563:CDS
TTTATAGTTGCAGCTTTGAA+GGG 0.553426 1.1:+41418230 MS.gene034563:CDS
ACCCTAGCCTTGTTCCTGAA+GGG 0.553675 1.1:+41417325 MS.gene034563:CDS
ATGTAAGGGACACCAGTTTG+AGG 0.558666 1.1:-41418775 None:intergenic
CAAGCAGTTGCACTAAGAAG+TGG 0.560018 1.1:+41418190 MS.gene034563:CDS
CCCTTGCAAATGGTTTCTGG+TGG 0.562538 1.1:-41416887 None:intergenic
TCCACCAGAAACCATTTGCA+AGG 0.564730 1.1:+41416886 MS.gene034563:CDS
GGCAATCGCAATGTCGCTGA+TGG 0.564812 1.1:+41417730 MS.gene034563:CDS
CATCCAACCCTTCAGGAACA+AGG 0.568039 1.1:-41417332 None:intergenic
ATCTTCAAGAGCGCGAATTG+TGG 0.568143 1.1:-41417068 None:intergenic
ATGATTCTGCTAGACGCCAT+GGG 0.571818 1.1:+41417458 MS.gene034563:CDS
ACCCTTCAGGAACAAGGCTA+GGG 0.572687 1.1:-41417326 None:intergenic
AGAATAAAATAAGAACATCA+TGG 0.573410 1.1:+41417359 MS.gene034563:CDS
GTTGTTAGTCAAGATGGAAG+TGG 0.573418 1.1:+41417532 MS.gene034563:CDS
GTTTCATAAACCCTTCTGGT+TGG 0.577634 1.1:+41418578 MS.gene034563:CDS
TTTAATCCTATCACAGCTCA+AGG 0.579785 1.1:+41418397 MS.gene034563:CDS
GGTTAGTCAAAACGGCGCTA+AGG 0.579986 1.1:-41417201 None:intergenic
TACTTAATGATGATTGGAGA+AGG 0.582331 1.1:+41417685 MS.gene034563:CDS
TCCATTCACGCCAACCAGAA+GGG 0.592883 1.1:-41418588 None:intergenic
GAATATGATAATAGAGGACC+AGG 0.596632 1.1:+41418646 MS.gene034563:CDS
AAACATACCTAGGGAGACCA+TGG 0.607181 1.1:+41418512 MS.gene034563:CDS
ACCGACCCGAATCAAAACAC+TGG 0.608494 1.1:+41418424 MS.gene034563:CDS
ATATCAATCCACTCATGTAA+GGG 0.611046 1.1:-41418789 None:intergenic
TGTCCACTTAAAGGAAGGCG+AGG 0.613023 1.1:-41418373 None:intergenic
ACTGGTGTCCCTTACATGAG+TGG 0.613192 1.1:+41418781 MS.gene034563:CDS
TCTGGTTGGCGTGAATGGAA+TGG 0.615333 1.1:+41418592 MS.gene034563:CDS
CCACCAGAAACCATTTGCAA+GGG 0.619550 1.1:+41416887 MS.gene034563:CDS
TGTGAAATTTGCTGCATCAG+TGG 0.628516 1.1:-41418719 None:intergenic
GAACTGTTCAAACATACCTA+GGG 0.647641 1.1:+41418503 MS.gene034563:CDS
GCACCAATAACATGATAACC+AGG 0.649380 1.1:-41418697 None:intergenic
GCACTGCAAATAGAGTAACA+TGG 0.741232 1.1:+41418674 MS.gene034563:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAATATTTTACGATT+TGG - chr1.1:41417863-41417882 None:intergenic 10.0%
!! AAACACTTGAATTTCAAAAA+TGG + chr1.1:41417394-41417413 MS.gene034563:CDS 20.0%
!! AAGAAATACTTAATGATGAT+TGG + chr1.1:41417679-41417698 MS.gene034563:CDS 20.0%
!! AGAATAAAATAAGAACATCA+TGG + chr1.1:41417359-41417378 MS.gene034563:CDS 20.0%
!! ATCAATCAAACAATTATTAC+AGG + chr1.1:41417709-41417728 MS.gene034563:CDS 20.0%
!! GAATACTTATCAAATACTTA+TGG + chr1.1:41417118-41417137 MS.gene034563:CDS 20.0%
!! TTGATAAGTATTCAAAACTT+AGG - chr1.1:41417111-41417130 None:intergenic 20.0%
!!! ATATTAATTTTTCTTACCGA+AGG - chr1.1:41417779-41417798 None:intergenic 20.0%
!!! TGAATAACGATTGATAATTT+TGG + chr1.1:41417952-41417971 MS.gene034563:intron 20.0%
!!! TGATGTTCTTATTTTATTCT+CGG - chr1.1:41417359-41417378 None:intergenic 20.0%
! AAGGAAAGTTTCAAAATCTT+CGG - chr1.1:41417185-41417204 None:intergenic 25.0%
! AATGGAAACATATATGACTA+TGG + chr1.1:41416953-41416972 MS.gene034563:CDS 25.0%
! AGTTTATATGCAATCCTTTA+TGG + chr1.1:41418552-41418571 MS.gene034563:CDS 25.0%
! GTTTATGAAACTATCCATAA+AGG - chr1.1:41418569-41418588 None:intergenic 25.0%
! TATAGAGAATGTGATATCTA+TGG + chr1.1:41418292-41418311 MS.gene034563:CDS 25.0%
! TATGCAGAATATGATAATAG+AGG + chr1.1:41418640-41418659 MS.gene034563:CDS 25.0%
! TATGTTTGTGTGATTAAATG+TGG - chr1.1:41418007-41418026 None:intergenic 25.0%
! TGTGAATATGTAGCAATTTA+TGG - chr1.1:41417827-41417846 None:intergenic 25.0%
! TTTACAATAAGTAGGGTTTA+TGG - chr1.1:41416915-41416934 None:intergenic 25.0%
!! AACTGATGAAGATAGTATTT+TGG + chr1.1:41417495-41417514 MS.gene034563:CDS 25.0%
!!! GATGTTCTTATTTTATTCTC+GGG - chr1.1:41417358-41417377 None:intergenic 25.0%
!!! TAACGATTGATAATTTTGGT+TGG + chr1.1:41417956-41417975 MS.gene034563:intron 25.0%
!!! TTTTGGTTGGTTTTTAACAA+CGG + chr1.1:41417969-41417988 MS.gene034563:intron 25.0%
ACTTATTGTAAAACCGTTCT+TGG + chr1.1:41416923-41416942 MS.gene034563:CDS 30.0%
ATATCAATCCACTCATGTAA+GGG - chr1.1:41418792-41418811 None:intergenic 30.0%
ATGTAGCAATTTATGGTTTG+TGG - chr1.1:41417820-41417839 None:intergenic 30.0%
ATTCAAAACTTAGGTTAGCA+AGG - chr1.1:41417102-41417121 None:intergenic 30.0%
CAACAATTTCACTAACTTGA+TGG + chr1.1:41418082-41418101 MS.gene034563:intron 30.0%
CAATAAGTTCACAAACTTAC+GGG - chr1.1:41417011-41417030 None:intergenic 30.0%
CACTATATACACATTCTTTG+AGG + chr1.1:41418263-41418282 MS.gene034563:CDS 30.0%
CCAATAAGTTCACAAACTTA+CGG - chr1.1:41417012-41417031 None:intergenic 30.0%
GAACAAGATTGAAAGTAGAT+AGG - chr1.1:41416837-41416856 None:intergenic 30.0%
GGAAACATACAACTTCATAA+AGG - chr1.1:41416816-41416835 None:intergenic 30.0%
GGATTAAATTGTCCACTTAA+AGG - chr1.1:41418385-41418404 None:intergenic 30.0%
GTTCTTGAATATTCTTTCCA+TGG - chr1.1:41418532-41418551 None:intergenic 30.0%
TAAATTGTCCACTTAAAGGA+AGG - chr1.1:41418381-41418400 None:intergenic 30.0%
TACTTAATGATGATTGGAGA+AGG + chr1.1:41417685-41417704 MS.gene034563:CDS 30.0%
TATATCAATCCACTCATGTA+AGG - chr1.1:41418793-41418812 None:intergenic 30.0%
TATTAAACCAGCAGATGATT+TGG + chr1.1:41418468-41418487 MS.gene034563:CDS 30.0%
TTATTGGACTCATATCTTCA+AGG + chr1.1:41417025-41417044 MS.gene034563:CDS 30.0%
TTCAAAGCTGCAACTATAAA+AGG - chr1.1:41418230-41418249 None:intergenic 30.0%
! AGAACGGTTTTACAATAAGT+AGG - chr1.1:41416923-41416942 None:intergenic 30.0%
! ATTGTTGTTGTTAGTCAAGA+TGG + chr1.1:41417526-41417545 MS.gene034563:CDS 30.0%
! GAACGGTTTTACAATAAGTA+GGG - chr1.1:41416922-41416941 None:intergenic 30.0%
! GTTGACTTCATATTTGGAAA+TGG + chr1.1:41418319-41418338 MS.gene034563:CDS 30.0%
! TGTTTGTTGGTTAGTCAAAA+CGG - chr1.1:41417212-41417231 None:intergenic 30.0%
! TTAATTTTTCTTACCGAAGG+TGG - chr1.1:41417776-41417795 None:intergenic 30.0%
!! GCTTTATTTGACATCTTCAA+TGG - chr1.1:41417427-41417446 None:intergenic 30.0%
!! GGTTTTTAACAACGGATTTT+TGG + chr1.1:41417977-41417996 MS.gene034563:intron 30.0%
!! TTCCTCATTTTTATCACAGA+AGG + chr1.1:41417622-41417641 MS.gene034563:CDS 30.0%
!! TTTATAGTTGCAGCTTTGAA+GGG + chr1.1:41418230-41418249 MS.gene034563:CDS 30.0%
!! TTTTATAGTTGCAGCTTTGA+AGG + chr1.1:41418229-41418248 MS.gene034563:CDS 30.0%
!!! AAATTCCAGTGTTTTGATTC+GGG - chr1.1:41418432-41418451 None:intergenic 30.0%
!!! GAAATTCCAGTGTTTTGATT+CGG - chr1.1:41418433-41418452 None:intergenic 30.0%
AACCAACAAACATGTTTGGA+TGG + chr1.1:41417220-41417239 MS.gene034563:CDS 35.0%
AATAACACAGTTGCAAGTGA+TGG + chr1.1:41417595-41417614 MS.gene034563:CDS 35.0%
ACAGTGTCTAACTTTGTTAG+TGG + chr1.1:41418739-41418758 MS.gene034563:CDS 35.0%
AGCTATTGCATCATTGATAG+TGG - chr1.1:41417566-41417585 None:intergenic 35.0%
CACCTTCTGTGATAAAAATG+AGG - chr1.1:41417627-41417646 None:intergenic 35.0%
CCGTAAGTTTGTGAACTTAT+TGG + chr1.1:41417009-41417028 MS.gene034563:CDS 35.0%
CTATACTATGCCATGACTTA+TGG + chr1.1:41418035-41418054 MS.gene034563:intron 35.0%
GAACTGTTCAAACATACCTA+GGG + chr1.1:41418503-41418522 MS.gene034563:CDS 35.0%
GAATATGATAATAGAGGACC+AGG + chr1.1:41418646-41418665 MS.gene034563:CDS 35.0%
GACTAACCAACAAACATGTT+TGG + chr1.1:41417216-41417235 MS.gene034563:CDS 35.0%
GATAGTTTCATAAACCCTTC+TGG + chr1.1:41418574-41418593 MS.gene034563:CDS 35.0%
GTTTGAACAGTTCCAACTTT+AGG - chr1.1:41418496-41418515 None:intergenic 35.0%
TTTAATCCTATCACAGCTCA+AGG + chr1.1:41418397-41418416 MS.gene034563:CDS 35.0%
! ACTTTGTTAGTGGTGATGAT+TGG + chr1.1:41418749-41418768 MS.gene034563:CDS 35.0%
! GGAACAGTTGACTTCATATT+TGG + chr1.1:41418313-41418332 MS.gene034563:CDS 35.0%
! TCACTTGCAACTGTGTTATT+TGG - chr1.1:41417595-41417614 None:intergenic 35.0%
! TTCAAGTGTTTCCCTTTTTG+TGG - chr1.1:41417385-41417404 None:intergenic 35.0%
!! TTTGAAGTAGTTTTCTCCCA+TGG - chr1.1:41417477-41417496 None:intergenic 35.0%
!!! TCCATTTTGACTACCAAGAA+CGG - chr1.1:41416939-41416958 None:intergenic 35.0%
AAACTTACGGGATTGGGATA+AGG - chr1.1:41416999-41417018 None:intergenic 40.0%
ACATTCAATTCAGCCACCTT+CGG + chr1.1:41417760-41417779 MS.gene034563:CDS 40.0%
AGAACATCATGGCCACAAAA+AGG + chr1.1:41417370-41417389 MS.gene034563:CDS 40.0%
AGTTCACAAACTTACGGGAT+TGG - chr1.1:41417006-41417025 None:intergenic 40.0%
GAACATCATGGCCACAAAAA+GGG + chr1.1:41417371-41417390 MS.gene034563:CDS 40.0%
GACCATCCAAACATGTTTGT+TGG - chr1.1:41417225-41417244 None:intergenic 40.0%
GATGATTGGATTCCTCAAAC+TGG + chr1.1:41418763-41418782 MS.gene034563:CDS 40.0%
GCACCAATAACATGATAACC+AGG - chr1.1:41418700-41418719 None:intergenic 40.0%
GCACTGCAAATAGAGTAACA+TGG + chr1.1:41418674-41418693 MS.gene034563:CDS 40.0%
GGAACTGTTCAAACATACCT+AGG + chr1.1:41418502-41418521 MS.gene034563:CDS 40.0%
GTTCACAAACTTACGGGATT+GGG - chr1.1:41417005-41417024 None:intergenic 40.0%
GTTGTTAGTCAAGATGGAAG+TGG + chr1.1:41417532-41417551 MS.gene034563:CDS 40.0%
GTTTATGGTACCCTTGCAAA+TGG - chr1.1:41416900-41416919 None:intergenic 40.0%
GTTTCATAAACCCTTCTGGT+TGG + chr1.1:41418578-41418597 MS.gene034563:CDS 40.0%
TGGCCTGGTTATCATGTTAT+TGG + chr1.1:41418694-41418713 MS.gene034563:CDS 40.0%
TTCATGCATGCCATAAGTCA+TGG - chr1.1:41418048-41418067 None:intergenic 40.0%
! ACCGTTCTTGGTAGTCAAAA+TGG + chr1.1:41416935-41416954 MS.gene034563:CDS 40.0%
! CACTAACTTGATGGTTCATG+TGG + chr1.1:41418091-41418110 MS.gene034563:intron 40.0%
! GATGATTTGGCTCCTAAAGT+TGG + chr1.1:41418481-41418500 MS.gene034563:CDS 40.0%
!! TGTGAAATTTGCTGCATCAG+TGG - chr1.1:41418722-41418741 None:intergenic 40.0%
AAACATACCTAGGGAGACCA+TGG + chr1.1:41418512-41418531 MS.gene034563:CDS 45.0%
ATAACATTTCGCAACACCGC+TGG + chr1.1:41418154-41418173 MS.gene034563:CDS 45.0%
ATGATTCTGCTAGACGCCAT+GGG + chr1.1:41417458-41417477 MS.gene034563:CDS 45.0%
ATGTAAGGGACACCAGTTTG+AGG - chr1.1:41418778-41418797 None:intergenic 45.0%
ATTCTTTCCATGGTCTCCCT+AGG - chr1.1:41418522-41418541 None:intergenic 45.0%
CAAGCAGTTGCACTAAGAAG+TGG + chr1.1:41418190-41418209 MS.gene034563:CDS 45.0%
CACTCTTTGATCAGAAGCTG+TGG - chr1.1:41417254-41417273 None:intergenic 45.0%
CCACCAGAAACCATTTGCAA+GGG + chr1.1:41416887-41416906 MS.gene034563:CDS 45.0%
CTATTTGCAGTGCTTGAACC+TGG - chr1.1:41418667-41418686 None:intergenic 45.0%
GCAAATAGAGTAACATGGCC+TGG + chr1.1:41418679-41418698 MS.gene034563:CDS 45.0%
GTACCCTTGCAAATGGTTTC+TGG - chr1.1:41416893-41416912 None:intergenic 45.0%
TATCCTCGCCTTCCTTTAAG+TGG + chr1.1:41418370-41418389 MS.gene034563:CDS 45.0%
TATGATTCTGCTAGACGCCA+TGG + chr1.1:41417457-41417476 MS.gene034563:CDS 45.0%
TCCACCAGAAACCATTTGCA+AGG + chr1.1:41416886-41416905 MS.gene034563:CDS 45.0%
TTAGGAGCCAAATCATCTGC+TGG - chr1.1:41418478-41418497 None:intergenic 45.0%
TTCATGTGGATTTGCAGCTG+TGG + chr1.1:41418105-41418124 MS.gene034563:intron 45.0%
! AAATCTTCGGCTTGAGAAGC+TGG - chr1.1:41417172-41417191 None:intergenic 45.0%
! ATCTTCAAGAGCGCGAATTG+TGG - chr1.1:41417071-41417090 None:intergenic 45.0%
! TTGATGTTTTGCTGCTCCAG+CGG - chr1.1:41418173-41418192 None:intergenic 45.0%
!!! TCCAGTGTTTTGATTCGGGT+CGG - chr1.1:41418428-41418447 None:intergenic 45.0%
!!! TAAATTATTAAATTATTTTG+TGG - chr1.1:41417916-41417935 None:intergenic 5.0%
AACCCTTCAGGAACAAGGCT+AGG - chr1.1:41417330-41417349 None:intergenic 50.0%
ACCCTTCAGGAACAAGGCTA+GGG - chr1.1:41417329-41417348 None:intergenic 50.0%
ACCGACCCGAATCAAAACAC+TGG + chr1.1:41418424-41418443 MS.gene034563:CDS 50.0%
ACTGGTGTCCCTTACATGAG+TGG + chr1.1:41418781-41418800 MS.gene034563:CDS 50.0%
CATCCAACCCTTCAGGAACA+AGG - chr1.1:41417335-41417354 None:intergenic 50.0%
GTTCGACCTTGAGCTGTGAT+AGG - chr1.1:41418406-41418425 None:intergenic 50.0%
TCCATTCACGCCAACCAGAA+GGG - chr1.1:41418591-41418610 None:intergenic 50.0%
TCTGGTTGGCGTGAATGGAA+TGG + chr1.1:41418592-41418611 MS.gene034563:CDS 50.0%
TGTCCACTTAAAGGAAGGCG+AGG - chr1.1:41418376-41418395 None:intergenic 50.0%
TTCCATTCACGCCAACCAGA+AGG - chr1.1:41418592-41418611 None:intergenic 50.0%
TTGCAGCTGTGGTTGCTCAA+GGG + chr1.1:41418116-41418135 MS.gene034563:intron 50.0%
TTTGCAGCTGTGGTTGCTCA+AGG + chr1.1:41418115-41418134 MS.gene034563:intron 50.0%
! CCCTTGCAAATGGTTTCTGG+TGG - chr1.1:41416890-41416909 None:intergenic 50.0%
! GGTTAGTCAAAACGGCGCTA+AGG - chr1.1:41417204-41417223 None:intergenic 50.0%
!! AACCCTAGCCTTGTTCCTGA+AGG + chr1.1:41417324-41417343 MS.gene034563:CDS 50.0%
!! ACCCTAGCCTTGTTCCTGAA+GGG + chr1.1:41417325-41417344 MS.gene034563:CDS 50.0%
!! TAGCCTTGTTCCTGAAGGGT+TGG + chr1.1:41417329-41417348 MS.gene034563:CDS 50.0%
GGCAATCGCAATGTCGCTGA+TGG + chr1.1:41417730-41417749 MS.gene034563:CDS 55.0%
TGTGGTTGCTCAAGGGTTCG+TGG + chr1.1:41418123-41418142 MS.gene034563:CDS 55.0%
! ACCCTTCTGGTTGGCGTGAA+TGG + chr1.1:41418587-41418606 MS.gene034563:CDS 55.0%
TCTCGGGCATCCAACCCTTC+AGG - chr1.1:41417342-41417361 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 41416794 41418813 41416794 ID=MS.gene034563
chr1.1 mRNA 41416794 41418813 41416794 ID=MS.gene034563.t1;Parent=MS.gene034563
chr1.1 exon 41416794 41417781 41416794 ID=MS.gene034563.t1.exon1;Parent=MS.gene034563.t1
chr1.1 CDS 41416794 41417781 41416794 ID=cds.MS.gene034563.t1;Parent=MS.gene034563.t1
chr1.1 exon 41418122 41418813 41418122 ID=MS.gene034563.t1.exon2;Parent=MS.gene034563.t1
chr1.1 CDS 41418122 41418813 41418122 ID=cds.MS.gene034563.t1;Parent=MS.gene034563.t1
Gene Sequence

>MS.gene034563

ATGGCTTTCAAAAACTTCACCTTTATGAAGTTGTATGTTTCCTATCTACTTTCAATCTTGTTCTTTGTATCATTGTGTGTAGCAAATAATGTTCCACCAGAAACCATTTGCAAGGGTACCATAAACCCTACTTATTGTAAAACCGTTCTTGGTAGTCAAAATGGAAACATATATGACTATGGTCGCATTTCTATTCGAAAGTCCTTATCCCAATCCCGTAAGTTTGTGAACTTATTGGACTCATATCTTCAAGGTAGTTCGTCTTTGTCTCAATCCACAATTCGCGCTCTTGAAGATTGTCAATACCTTGCTAACCTAAGTTTTGAATACTTATCAAATACTTATGGCACAACAAATCAATCTAGTAACGTTCTTCCAGCTTCTCAAGCCGAAGATTTTGAAACTTTCCTTAGCGCCGTTTTGACTAACCAACAAACATGTTTGGATGGTCTAAACACCACAGCTTCTGATCAAAGAGTGAAAAATGACTTGTCATTATCTCTCTCTGATGACATAAAGCTTCATAGCGTAACCCTAGCCTTGTTCCTGAAGGGTTGGATGCCCGAGAATAAAATAAGAACATCATGGCCACAAAAAGGGAAACACTTGAATTTCAAAAATGGTAATTTACCATTGAAGATGTCAAATAAAGCACGCGCTATTTATGATTCTGCTAGACGCCATGGGAGAAAACTACTTCAAACTGATGAAGATAGTATTTTGGTTAGTGATATTGTTGTTGTTAGTCAAGATGGAAGTGGAAACTTTACCACTATCAATGATGCAATAGCTGCTGCACCAAATAACACAGTTGCAAGTGATGGATACTTCCTCATTTTTATCACAGAAGGTGTGTATGAAGAGTATGTCTCTATTGACAAAAAGAAGAAATACTTAATGATGATTGGAGAAGGAATCAATCAAACAATTATTACAGGCAATCGCAATGTCGCTGATGGTTTCACAACATTCAATTCAGCCACCTTCGGTAAGAAAAATTAATATTTAGACGTATTAAATAGACCACAAACCATAAATTGCTACATATTCACAACTCATTTAGTGACCAAATCGTAAAATATTTTTTTTTTGCTGAATCAAGAGCGTAATGACATCAAACCACAAAATAATTTAATAATTTATTTCACAAAATTGTTTTGAATAACGATTGATAATTTTGGTTGGTTTTTAACAACGGATTTTTGGTAGTCCACATTTAATCACACAAACATATTGTTAATCTATACTATGCCATGACTTATGGCATGCATGAAGATACGTTAGTTGTCAACAATTTCACTAACTTGATGGTTCATGTGGATTTGCAGCTGTGGTTGCTCAAGGGTTCGTGGCAGTTAACATAACATTTCGCAACACCGCTGGAGCAGCAAAACATCAAGCAGTTGCACTAAGAAGTGGAGCAGACATGTCTACCTTTTATAGTTGCAGCTTTGAAGGGTATCAAGACACACTATATACACATTCTTTGAGGCAATTCTATAGAGAATGTGATATCTATGGAACAGTTGACTTCATATTTGGAAATGGTGCAGTTGTTTTGCAAAATTGTAACATCTATCCTCGCCTTCCTTTAAGTGGACAATTTAATCCTATCACAGCTCAAGGTCGAACCGACCCGAATCAAAACACTGGAATTTCTATACAAAATGCAACTATTAAACCAGCAGATGATTTGGCTCCTAAAGTTGGAACTGTTCAAACATACCTAGGGAGACCATGGAAAGAATATTCAAGAACAGTTTATATGCAATCCTTTATGGATAGTTTCATAAACCCTTCTGGTTGGCGTGAATGGAATGGTGATTTTGCATTGAGCACTTTATATTATGCAGAATATGATAATAGAGGACCAGGTTCAAGCACTGCAAATAGAGTAACATGGCCTGGTTATCATGTTATTGGTGCCACTGATGCAGCAAATTTCACAGTGTCTAACTTTGTTAGTGGTGATGATTGGATTCCTCAAACTGGTGTCCCTTACATGAGTGGATTGATATAG
Protein sequence

>MS.gene034563.t1

MAFKNFTFMKLYVSYLLSILFFVSLCVANNVPPETICKGTINPTYCKTVLGSQNGNIYDYGRISIRKSLSQSRKFVNLLDSYLQGSSSLSQSTIRALEDCQYLANLSFEYLSNTYGTTNQSSNVLPASQAEDFETFLSAVLTNQQTCLDGLNTTASDQRVKNDLSLSLSDDIKLHSVTLALFLKGWMPENKIRTSWPQKGKHLNFKNGNLPLKMSNKARAIYDSARRHGRKLLQTDEDSILVSDIVVVSQDGSGNFTTINDAIAAAPNNTVASDGYFLIFITEGVYEEYVSIDKKKKYLMMIGEGINQTIITGNRNVADGFTTFNSATFAVVAQGFVAVNITFRNTAGAAKHQAVALRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNGAVVLQNCNIYPRLPLSGQFNPITAQGRTDPNQNTGISIQNATIKPADDLAPKVGTVQTYLGRPWKEYSRTVYMQSFMDSFINPSGWREWNGDFALSTLYYAEYDNRGPGSSTANRVTWPGYHVIGATDAANFTVSNFVSGDDWIPQTGVPYMSGLI