Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062191.t1 | XP_013468841.1 | 94.6 | 409 | 22 | 0 | 1 | 409 | 1 | 409 | 1.30E-231 | 812 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062191.t1 | P14749 | 78.3 | 369 | 80 | 0 | 41 | 409 | 43 | 411 | 8.4e-176 | 617.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062191.t1 | A0A072VNB8 | 94.6 | 409 | 22 | 0 | 1 | 409 | 1 | 409 | 9.1e-232 | 812.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87685 | MS.gene062191 | PPI |
| MS.gene92763 | MS.gene062191 | PPI |
| MS.gene06516 | MS.gene062191 | PPI |
| MS.gene059347 | MS.gene062191 | PPI |
| MS.gene062191 | MS.gene049391 | PPI |
| MS.gene062191 | MS.gene92764 | PPI |
| MS.gene036941 | MS.gene062191 | PPI |
| MS.gene036942 | MS.gene062191 | PPI |
| MS.gene27500 | MS.gene062191 | PPI |
| MS.gene062191 | MS.gene013419 | PPI |
| MS.gene27501 | MS.gene062191 | PPI |
| MS.gene87684 | MS.gene062191 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062191.t1 | MTR_1g077520 | 94.621 | 409 | 22 | 0 | 1 | 409 | 1 | 409 | 0.0 | 808 |
| MS.gene062191.t1 | MTR_6g086625 | 80.988 | 405 | 74 | 2 | 4 | 407 | 3 | 405 | 0.0 | 694 |
| MS.gene062191.t1 | MTR_1g077480 | 79.462 | 409 | 79 | 3 | 4 | 407 | 3 | 411 | 0.0 | 689 |
| MS.gene062191.t1 | MTR_1g077520 | 95.808 | 334 | 14 | 0 | 1 | 334 | 1 | 334 | 0.0 | 671 |
| MS.gene062191.t1 | MTR_6g086575 | 77.778 | 405 | 86 | 2 | 4 | 407 | 3 | 404 | 0.0 | 668 |
| MS.gene062191.t1 | MTR_6g069140 | 75.641 | 390 | 92 | 1 | 21 | 407 | 30 | 419 | 0.0 | 642 |
| MS.gene062191.t1 | MTR_7g073650 | 64.960 | 371 | 128 | 2 | 41 | 409 | 38 | 408 | 0.0 | 518 |
| MS.gene062191.t1 | MTR_7g073640 | 61.443 | 402 | 152 | 3 | 10 | 409 | 9 | 409 | 0.0 | 517 |
| MS.gene062191.t1 | MTR_3g094160 | 57.346 | 422 | 159 | 6 | 5 | 409 | 10 | 427 | 8.14e-180 | 508 |
| MS.gene062191.t1 | MTR_1g078410 | 52.153 | 209 | 43 | 4 | 7 | 209 | 4 | 161 | 4.05e-63 | 201 |
| MS.gene062191.t1 | MTR_0279s0030 | 53.600 | 125 | 56 | 2 | 287 | 409 | 101 | 225 | 7.19e-40 | 142 |
| MS.gene062191.t1 | MTR_0279s0030 | 53.600 | 125 | 56 | 2 | 287 | 409 | 185 | 309 | 9.43e-39 | 141 |
| MS.gene062191.t1 | MTR_0279s0030 | 53.600 | 125 | 56 | 2 | 287 | 409 | 250 | 374 | 4.08e-38 | 141 |
| MS.gene062191.t1 | MTR_8g089725 | 25.214 | 468 | 231 | 16 | 54 | 405 | 38 | 502 | 4.14e-26 | 110 |
| MS.gene062191.t1 | MTR_8g089735 | 25.000 | 468 | 232 | 16 | 54 | 405 | 38 | 502 | 2.25e-25 | 108 |
| MS.gene062191.t1 | MTR_2g096530 | 27.520 | 367 | 174 | 13 | 38 | 315 | 22 | 385 | 2.25e-21 | 96.7 |
| MS.gene062191.t1 | MTR_8g089745 | 26.703 | 367 | 178 | 13 | 38 | 316 | 20 | 383 | 4.56e-21 | 95.1 |
| MS.gene062191.t1 | MTR_3g086580 | 26.611 | 357 | 168 | 11 | 50 | 315 | 36 | 389 | 7.11e-21 | 95.5 |
| MS.gene062191.t1 | MTR_8g089740 | 25.676 | 370 | 184 | 12 | 33 | 316 | 15 | 379 | 8.01e-21 | 95.1 |
| MS.gene062191.t1 | MTR_8g089745 | 26.703 | 367 | 178 | 13 | 38 | 316 | 20 | 383 | 9.42e-21 | 95.1 |
| MS.gene062191.t1 | MTR_3g086580 | 31.285 | 179 | 94 | 6 | 164 | 315 | 26 | 202 | 7.00e-14 | 73.6 |
| MS.gene062191.t1 | MTR_3g094180 | 52.381 | 63 | 27 | 1 | 320 | 379 | 7 | 69 | 5.18e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062191.t1 | AT5G08370 | 72.527 | 364 | 100 | 0 | 43 | 406 | 29 | 392 | 0.0 | 587 |
| MS.gene062191.t1 | AT5G08370 | 72.131 | 366 | 102 | 0 | 41 | 406 | 1 | 366 | 0.0 | 584 |
| MS.gene062191.t1 | AT5G08380 | 60.442 | 407 | 156 | 3 | 7 | 409 | 5 | 410 | 0.0 | 522 |
| MS.gene062191.t1 | AT3G56310 | 64.151 | 371 | 128 | 4 | 43 | 409 | 62 | 431 | 3.64e-179 | 506 |
| MS.gene062191.t1 | AT3G56310 | 59.838 | 371 | 120 | 5 | 43 | 409 | 62 | 407 | 1.01e-160 | 458 |
| MS.gene062191.t1 | AT5G08380 | 63.259 | 313 | 111 | 2 | 7 | 316 | 5 | 316 | 6.55e-149 | 425 |
| MS.gene062191.t1 | AT3G26380 | 25.215 | 349 | 171 | 11 | 54 | 315 | 42 | 387 | 1.97e-20 | 93.6 |
| MS.gene062191.t1 | AT3G26380 | 25.215 | 349 | 171 | 11 | 54 | 315 | 42 | 387 | 4.85e-20 | 92.8 |
Find 108 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCGGATTCAAACAATAAA+TGG | 0.147087 | 1.1:-58020582 | MS.gene062191:CDS |
| GTCAACGGGACTTGCAAATT+TGG | 0.157242 | 1.1:-58022610 | MS.gene062191:CDS |
| TTGATTAAATACCTTTCTTT+AGG | 0.196467 | 1.1:+58021079 | None:intergenic |
| TGGAGTAGCTGGAATCATTT+TGG | 0.218651 | 1.1:-58022798 | MS.gene062191:CDS |
| TCAACATATGCTCGGTTATT+AGG | 0.229069 | 1.1:-58023885 | MS.gene062191:CDS |
| ATGCTAAAACATTTGCTTCT+TGG | 0.230773 | 1.1:-58021299 | MS.gene062191:CDS |
| GGGTACCATTATCTTAATTT+AGG | 0.240621 | 1.1:-58022588 | MS.gene062191:intron |
| AGGAGACATCTTGTTGAAAA+TGG | 0.251897 | 1.1:-58023831 | MS.gene062191:CDS |
| TGCTAAAACATTTGCTTCTT+GGG | 0.279893 | 1.1:-58021298 | MS.gene062191:intron |
| TCAACGGGACTTGCAAATTT+GGG | 0.283165 | 1.1:-58022609 | MS.gene062191:CDS |
| TTGAAAATGATAGGGAAATA+TGG | 0.285973 | 1.1:-58021557 | MS.gene062191:intron |
| ATCGTTCTCATTTCAGCATA+TGG | 0.316070 | 1.1:-58020372 | MS.gene062191:CDS |
| CAGGTGATATTGAAGATAAT+TGG | 0.330171 | 1.1:-58020756 | MS.gene062191:CDS |
| TTCATTAAGGCTTCACTCAT+TGG | 0.334944 | 1.1:+58020959 | None:intergenic |
| TGATTAAATACCTTTCTTTA+GGG | 0.343598 | 1.1:+58021080 | None:intergenic |
| CACGACAAGGGTTTAAAGTT+GGG | 0.350233 | 1.1:-58021481 | MS.gene062191:CDS |
| ACCTACCTAAATTAAGATAA+TGG | 0.357063 | 1.1:+58022583 | None:intergenic |
| CGTCCAAGGAGAAGGTAATT+AGG | 0.359088 | 1.1:-58023851 | MS.gene062191:CDS |
| TGACCTTCCAGATTTCATTA+AGG | 0.359870 | 1.1:+58020946 | None:intergenic |
| CTTGCATCAACAATGGCTTC+TGG | 0.362303 | 1.1:+58019485 | None:intergenic |
| TTGTTGATGCAAGAGATCTA+TGG | 0.366588 | 1.1:-58019475 | MS.gene062191:CDS |
| AGTGAAAAGTAATAATGATT+TGG | 0.371753 | 1.1:-58019980 | MS.gene062191:CDS |
| AGTGAAGCCTTAATGAAATC+TGG | 0.387023 | 1.1:-58020953 | MS.gene062191:CDS |
| TGATAGGCTCCTTTATTAGT+TGG | 0.398232 | 1.1:-58020217 | MS.gene062191:intron |
| CATCTTGTTGAAAATGGACT+TGG | 0.402096 | 1.1:-58023825 | MS.gene062191:CDS |
| TGAGGGAAATGTTGCAGTAT+TGG | 0.405098 | 1.1:+58021531 | None:intergenic |
| GAGGGAAATGTTGCAGTATT+GGG | 0.406174 | 1.1:+58021532 | None:intergenic |
| ACCCTTGTCGTGAACATAAT+CGG | 0.409497 | 1.1:+58021492 | None:intergenic |
| ATATCACAACCAACTAATAA+AGG | 0.413000 | 1.1:+58020208 | None:intergenic |
| GAAAGTATAGTTCGTGAAAC+AGG | 0.415057 | 1.1:-58022762 | MS.gene062191:intron |
| TCGTTCTCATTTCAGCATAT+GGG | 0.420766 | 1.1:-58020371 | MS.gene062191:CDS |
| TTCCCAACCTCAAGCATGTC+AGG | 0.426549 | 1.1:+58020418 | None:intergenic |
| TCTTCATGTCCCAGTGATCC+AGG | 0.429018 | 1.1:+58021327 | None:intergenic |
| AATCTCTCAGGTGGAGTAGC+TGG | 0.429622 | 1.1:-58022809 | MS.gene062191:intron |
| TAAACGTATGCCTGGATCAC+TGG | 0.433474 | 1.1:-58021337 | MS.gene062191:CDS |
| AACATTTCCCTCAGGAATGA+AGG | 0.439010 | 1.1:-58021521 | MS.gene062191:CDS |
| AATAAATGGGCATCGTATGC+TGG | 0.452885 | 1.1:-58020568 | MS.gene062191:CDS |
| AATAACCGAGCATATGTTGA+TGG | 0.456837 | 1.1:+58023888 | None:intergenic |
| ATCCTGACATGCTTGAGGTT+GGG | 0.456983 | 1.1:-58020420 | MS.gene062191:CDS |
| GCAGACAAACTAGGAGTTCA+AGG | 0.457937 | 1.1:-58020009 | MS.gene062191:intron |
| TCTCCTAATTACCTTCTCCT+TGG | 0.468719 | 1.1:+58023848 | None:intergenic |
| GGAAATAGTTGGAGAACAAC+AGG | 0.470549 | 1.1:-58020775 | MS.gene062191:CDS |
| TTGGGGATCTACTCAGATGC+TGG | 0.473654 | 1.1:-58021463 | MS.gene062191:CDS |
| TCACGACAAGGGTTTAAAGT+TGG | 0.475337 | 1.1:-58021482 | MS.gene062191:CDS |
| AGCGGATTCAAACAATAAAT+GGG | 0.476529 | 1.1:-58020581 | MS.gene062191:CDS |
| GCTGATGCAATGGTGTCAAC+GGG | 0.486539 | 1.1:-58022624 | MS.gene062191:CDS |
| CAGCATATGGGCTTTAGCTA+AGG | 0.488753 | 1.1:-58020359 | MS.gene062191:intron |
| TTTGTTATTGCAGACAAACT+AGG | 0.489482 | 1.1:-58020018 | MS.gene062191:intron |
| AGCTGATGCAATGGTGTCAA+CGG | 0.491878 | 1.1:-58022625 | MS.gene062191:CDS |
| GATCCTGACATGCTTGAGGT+TGG | 0.493056 | 1.1:-58020421 | MS.gene062191:CDS |
| TATATGTTGTAGGTTTGGGC+AGG | 0.494743 | 1.1:-58019602 | MS.gene062191:intron |
| ATGGGAAGACCCAGCAACAT+GGG | 0.494903 | 1.1:-58020809 | MS.gene062191:CDS |
| GTTGGTTATTAGTTCATATG+TGG | 0.497210 | 1.1:+58020168 | None:intergenic |
| ACTTGTAGTAAACGTATGCC+TGG | 0.499229 | 1.1:-58021345 | MS.gene062191:CDS |
| TCTTCTTCTCAATGTGTGAA+TGG | 0.499960 | 1.1:-58020922 | MS.gene062191:intron |
| GAAAAGTAATAATGATTTGG+AGG | 0.511671 | 1.1:-58019977 | MS.gene062191:intron |
| ATATTGAAGATAATTGGAAT+AGG | 0.511959 | 1.1:-58020750 | MS.gene062191:intron |
| GGCAATTAGACTCATGGCTA+TGG | 0.519918 | 1.1:-58023952 | MS.gene062191:CDS |
| TAATTACCATTCCATCCTCC+AGG | 0.520204 | 1.1:+58020544 | None:intergenic |
| AGGCAACAATAATTGCATCT+TGG | 0.520762 | 1.1:-58019526 | MS.gene062191:CDS |
| CTCTGAATCTCGATTGAGCT+CGG | 0.525537 | 1.1:+58021883 | None:intergenic |
| TTAAGGCTTCACTCATTGGC+GGG | 0.529204 | 1.1:+58020963 | None:intergenic |
| TACTGCAATAACTTCCGAGT+TGG | 0.529388 | 1.1:+58020150 | None:intergenic |
| GATGGGAAGACCCAGCAACA+TGG | 0.530363 | 1.1:-58020810 | MS.gene062191:CDS |
| AAGGTCTAAGCCCTAAAGAA+AGG | 0.535262 | 1.1:-58021090 | MS.gene062191:intron |
| CACTATGGCAATTAGACTCA+TGG | 0.537430 | 1.1:-58023958 | None:intergenic |
| ACGACAAGGGTTTAAAGTTG+GGG | 0.537512 | 1.1:-58021480 | MS.gene062191:CDS |
| CGTATGCTGGACCTGGAGGA+TGG | 0.538221 | 1.1:-58020555 | MS.gene062191:CDS |
| ATTAAGGCTTCACTCATTGG+CGG | 0.541238 | 1.1:+58020962 | None:intergenic |
| TGTTGATGCAAGAGATCTAT+GGG | 0.541350 | 1.1:-58019474 | MS.gene062191:CDS |
| ACATTTCCCTCAGGAATGAA+GGG | 0.554817 | 1.1:-58021520 | MS.gene062191:CDS |
| GACATGCTTGAGGTTGGGAA+TGG | 0.559763 | 1.1:-58020415 | MS.gene062191:CDS |
| TGGGCATCGTATGCTGGACC+TGG | 0.560426 | 1.1:-58020562 | MS.gene062191:CDS |
| TTCCACTTGAAACTAGCTCG+TGG | 0.562402 | 1.1:+58019284 | None:intergenic |
| ATTGCATCTTGGTCTGACAT+AGG | 0.566385 | 1.1:-58019515 | MS.gene062191:CDS |
| TGGGGATCTACTCAGATGCT+GGG | 0.569882 | 1.1:-58021462 | MS.gene062191:intron |
| AAACGTATGCCTGGATCACT+GGG | 0.570234 | 1.1:-58021336 | MS.gene062191:CDS |
| CAACGGGACTTGCAAATTTG+GGG | 0.574225 | 1.1:-58022608 | MS.gene062191:CDS |
| GCCGATTATGTTCACGACAA+GGG | 0.574231 | 1.1:-58021493 | MS.gene062191:CDS |
| TAAAGAGTAACTTACCCCAT+GGG | 0.574865 | 1.1:+58023792 | None:intergenic |
| CAAAACAACGTCCAAGGAGA+AGG | 0.581274 | 1.1:-58023859 | MS.gene062191:CDS |
| ATTAGATCCTGACATGCTTG+AGG | 0.584939 | 1.1:-58020425 | MS.gene062191:intron |
| AATTATCACAGCTGATGCAA+TGG | 0.587045 | 1.1:-58022634 | MS.gene062191:intron |
| ATGCTTGAGGTTGGGAATGG+AGG | 0.591259 | 1.1:-58020412 | MS.gene062191:CDS |
| AATACTGCAACATTTCCCTC+AGG | 0.594240 | 1.1:-58021529 | MS.gene062191:CDS |
| GGCTAAACCCTTCATTCCTG+AGG | 0.594380 | 1.1:+58021513 | None:intergenic |
| AGGTAACAAAACAACGTCCA+AGG | 0.594953 | 1.1:-58023865 | MS.gene062191:CDS |
| ATGGAATAGGAGCTCAACAA+AGG | 0.594956 | 1.1:-58019546 | MS.gene062191:CDS |
| GCTGGACCTGGAGGATGGAA+TGG | 0.595925 | 1.1:-58020550 | MS.gene062191:intron |
| CCCTAGCATGACTTCTATAG+CGG | 0.600037 | 1.1:-58020599 | MS.gene062191:intron |
| ATGTTCCATCAACATATGCT+CGG | 0.601832 | 1.1:-58023893 | MS.gene062191:CDS |
| TGGTTGTGATATTCGTGCAA+TGG | 0.603010 | 1.1:-58020197 | MS.gene062191:CDS |
| TCCACTTGAAACTAGCTCGT+GGG | 0.603078 | 1.1:+58019285 | None:intergenic |
| AGCCGATTATGTTCACGACA+AGG | 0.606759 | 1.1:-58021494 | MS.gene062191:CDS |
| CGAGCTCAATCGAGATTCAG+AGG | 0.612330 | 1.1:-58021882 | MS.gene062191:intron |
| AGGTCCTCTAAGTGAAAACA+AGG | 0.615653 | 1.1:-58019582 | MS.gene062191:CDS |
| TATGATAATTGTGAAAACAA+AGG | 0.625517 | 1.1:-58021109 | MS.gene062191:CDS |
| GCTAAACCCTTCATTCCTGA+GGG | 0.626418 | 1.1:+58021514 | None:intergenic |
| AAGCCTTAATGAAATCTGGA+AGG | 0.632024 | 1.1:-58020949 | MS.gene062191:CDS |
| TAGATCTCTTGCATCAACAA+TGG | 0.642957 | 1.1:+58019478 | None:intergenic |
| GAAGTTATTGCAGTAAACCA+AGG | 0.645190 | 1.1:-58020142 | MS.gene062191:intron |
| AAAGAGTAACTTACCCCATG+GGG | 0.654754 | 1.1:+58023793 | None:intergenic |
| AGCATGAGAATCTATTTCAG+CGG | 0.658536 | 1.1:+58019329 | None:intergenic |
| ATATGAACTAATAACCAACT+CGG | 0.665369 | 1.1:-58020164 | MS.gene062191:CDS |
| GCATCGTATGCTGGACCTGG+AGG | 0.696296 | 1.1:-58020559 | MS.gene062191:CDS |
| AAGAGTAACTTACCCCATGG+GGG | 0.697614 | 1.1:+58023794 | None:intergenic |
| AGAGTAACTTACCCCATGGG+GGG | 0.714241 | 1.1:+58023795 | None:intergenic |
| TGATGCAAGAGATCTATGGG+AGG | 0.758189 | 1.1:-58019471 | MS.gene062191:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTATAAAATAATTAATGA+TGG | - | chr1.1:58019900-58019919 | MS.gene062191:intron | 10.0% |
| !! | GAAATTAATAAATTCATAAA+TGG | + | chr1.1:58019841-58019860 | None:intergenic | 10.0% |
| !! | TTAAATATAATGAAATATGT+TGG | + | chr1.1:58023373-58023392 | None:intergenic | 10.0% |
| !! | TTATCAATATATAACAAAAA+TGG | + | chr1.1:58022576-58022595 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGAAGATAGTTA+TGG | + | chr1.1:58020950-58020969 | None:intergenic | 15.0% |
| !! | ATTTATTAATTTCTTCCATT+TGG | - | chr1.1:58019848-58019867 | MS.gene062191:intron | 15.0% |
| !! | CATATTAGTTCAATATTAAA+GGG | - | chr1.1:58020109-58020128 | MS.gene062191:intron | 15.0% |
| !! | GTCAAAAAATATATATTTGA+TGG | + | chr1.1:58020534-58020553 | None:intergenic | 15.0% |
| !! | TAGTAAATTAAAAAGAGAAA+TGG | + | chr1.1:58020081-58020100 | None:intergenic | 15.0% |
| !! | TAGTCATTCAATAAAAAAAA+AGG | - | chr1.1:58021136-58021155 | MS.gene062191:intron | 15.0% |
| !! | TATAAAATAATTAATGATGG+TGG | - | chr1.1:58019903-58019922 | MS.gene062191:intron | 15.0% |
| !! | TGACATTATATAAGAATTAT+TGG | + | chr1.1:58022247-58022266 | None:intergenic | 15.0% |
| !! | TGTTTCACAAAATTATTTAA+CGG | + | chr1.1:58022415-58022434 | None:intergenic | 15.0% |
| !!! | AAATAATTTTGTGAAACATA+GGG | - | chr1.1:58022417-58022436 | MS.gene062191:intron | 15.0% |
| !!! | ACTAATACTAAACTATTTTT+AGG | - | chr1.1:58023493-58023512 | MS.gene062191:intron | 15.0% |
| !!! | CTGATTTAAATTTTTCTTTA+GGG | - | chr1.1:58022102-58022121 | MS.gene062191:intron | 15.0% |
| !!! | GAAATTTTCTTAATATAGAT+AGG | - | chr1.1:58023623-58023642 | MS.gene062191:intron | 15.0% |
| !!! | TAAATAATTTTGTGAAACAT+AGG | - | chr1.1:58022416-58022435 | MS.gene062191:intron | 15.0% |
| !! | AAAATAATTTGATCACAAGA+TGG | + | chr1.1:58022624-58022643 | None:intergenic | 20.0% |
| !! | ACTCTTTATTATCAATTTCT+TGG | - | chr1.1:58019473-58019492 | MS.gene062191:CDS | 20.0% |
| !! | AGAAACATGCATATTTAAAT+TGG | + | chr1.1:58021501-58021520 | None:intergenic | 20.0% |
| !! | AGTGAAAAGTAATAATGATT+TGG | - | chr1.1:58023270-58023289 | MS.gene062191:intron | 20.0% |
| !! | ATATTGAAGATAATTGGAAT+AGG | - | chr1.1:58022500-58022519 | MS.gene062191:intron | 20.0% |
| !! | ATCATGAAAATTATCATCAT+GGG | + | chr1.1:58020405-58020424 | None:intergenic | 20.0% |
| !! | ATTTCTTCTATATGTCAATA+AGG | - | chr1.1:58023179-58023198 | MS.gene062191:intron | 20.0% |
| !! | CAATATTCTCTAAATTTCAA+TGG | + | chr1.1:58022777-58022796 | None:intergenic | 20.0% |
| !! | CCTAAAGAAAAATTTAAATC+AGG | + | chr1.1:58022104-58022123 | None:intergenic | 20.0% |
| !! | CTAACTAATTGAAAATGATA+GGG | - | chr1.1:58021685-58021704 | MS.gene062191:intron | 20.0% |
| !! | GCATATTAGTTCAATATTAA+AGG | - | chr1.1:58020108-58020127 | MS.gene062191:intron | 20.0% |
| !! | TAAGGAATCAATGAAAAAAA+CGG | - | chr1.1:58022523-58022542 | MS.gene062191:intron | 20.0% |
| !! | TAATAAATTCATAAATGGAG+AGG | + | chr1.1:58019836-58019855 | None:intergenic | 20.0% |
| !! | TATAAGATAAAGTTGAACAA+TGG | + | chr1.1:58020031-58020050 | None:intergenic | 20.0% |
| !! | TATCATGAAAATTATCATCA+TGG | + | chr1.1:58020406-58020425 | None:intergenic | 20.0% |
| !! | TATGATAATTGTGAAAACAA+AGG | - | chr1.1:58022141-58022160 | MS.gene062191:intron | 20.0% |
| !! | TCCTTATATATATATTCTCA+AGG | - | chr1.1:58023601-58023620 | MS.gene062191:intron | 20.0% |
| !! | TCCTTGAGAATATATATATA+AGG | + | chr1.1:58023605-58023624 | None:intergenic | 20.0% |
| !! | TCTAACTAATTGAAAATGAT+AGG | - | chr1.1:58021684-58021703 | MS.gene062191:intron | 20.0% |
| !! | TGATTAAATACCTTTCTTTA+GGG | + | chr1.1:58022173-58022192 | None:intergenic | 20.0% |
| !! | TGATTGAATATCACAAAATT+GGG | + | chr1.1:58019523-58019542 | None:intergenic | 20.0% |
| !! | TTGATTAAATACCTTTCTTT+AGG | + | chr1.1:58022174-58022193 | None:intergenic | 20.0% |
| !! | TTGATTGAATATCACAAAAT+TGG | + | chr1.1:58019524-58019543 | None:intergenic | 20.0% |
| !!! | AAAAAGAAACTCTTTTACTA+GGG | + | chr1.1:58022740-58022759 | None:intergenic | 20.0% |
| !!! | AATAATTTTGTGAAACATAG+GGG | - | chr1.1:58022418-58022437 | MS.gene062191:intron | 20.0% |
| !!! | ATACAAACAATTTTGACTTT+AGG | + | chr1.1:58023572-58023591 | None:intergenic | 20.0% |
| !!! | ATTTTTTACAAGCTTCTAAA+AGG | - | chr1.1:58020228-58020247 | MS.gene062191:intron | 20.0% |
| !!! | CCTGATTTAAATTTTTCTTT+AGG | - | chr1.1:58022101-58022120 | MS.gene062191:intron | 20.0% |
| !!! | GATTATTGTATCTTTTTCAA+AGG | - | chr1.1:58021660-58021679 | MS.gene062191:intron | 20.0% |
| !!! | TAAAAAATGTATCCTCTTTT+AGG | + | chr1.1:58020216-58020235 | None:intergenic | 20.0% |
| !!! | TAAAAAGAAACTCTTTTACT+AGG | + | chr1.1:58022741-58022760 | None:intergenic | 20.0% |
| !!! | TACAAACAATTTTGACTTTA+GGG | + | chr1.1:58023571-58023590 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTTATCTATACCT+TGG | + | chr1.1:58023128-58023147 | None:intergenic | 20.0% |
| !!! | TTTAGGAGTATATTTTGATT+TGG | + | chr1.1:58020199-58020218 | None:intergenic | 20.0% |
| ! | AATATCCATAACTATCTATG+TGG | - | chr1.1:58020976-58020995 | MS.gene062191:intron | 25.0% |
| ! | ACCATTATCTTAATTTAGGT+AGG | - | chr1.1:58020666-58020685 | MS.gene062191:intron | 25.0% |
| ! | ACCTACCTAAATTAAGATAA+TGG | + | chr1.1:58020670-58020689 | None:intergenic | 25.0% |
| ! | AGACACATAAAATAGATAGT+GGG | + | chr1.1:58019932-58019951 | None:intergenic | 25.0% |
| ! | ATAATGAAATATGTTGGTGT+CGG | + | chr1.1:58023367-58023386 | None:intergenic | 25.0% |
| ! | ATATATAGTATGAATCTCTC+AGG | - | chr1.1:58020429-58020448 | MS.gene062191:intron | 25.0% |
| ! | ATATCACAACCAACTAATAA+AGG | + | chr1.1:58023045-58023064 | None:intergenic | 25.0% |
| ! | ATATGAACTAATAACCAACT+CGG | - | chr1.1:58023086-58023105 | MS.gene062191:intron | 25.0% |
| ! | ATGAACCAAAGAACAATATA+AGG | + | chr1.1:58023825-58023844 | None:intergenic | 25.0% |
| ! | ATTGACCTTATATTGTTCTT+TGG | - | chr1.1:58023817-58023836 | MS.gene062191:CDS | 25.0% |
| ! | ATTTAACGGCAAATAGAAAA+TGG | + | chr1.1:58022401-58022420 | None:intergenic | 25.0% |
| ! | TAAAACCTATTTGCATTTGA+AGG | + | chr1.1:58022200-58022219 | None:intergenic | 25.0% |
| ! | TAGACACATAAAATAGATAG+TGG | + | chr1.1:58019933-58019952 | None:intergenic | 25.0% |
| ! | TCAAAATATACTCCTAAAAG+AGG | - | chr1.1:58020201-58020220 | MS.gene062191:CDS | 25.0% |
| ! | TCTAAAAGGATACTTAAGAA+AGG | - | chr1.1:58020242-58020261 | MS.gene062191:intron | 25.0% |
| ! | TTGAAAATGATAGGGAAATA+TGG | - | chr1.1:58021693-58021712 | MS.gene062191:intron | 25.0% |
| !! | AGATTAGTAAGTCTAGAATT+TGG | + | chr1.1:58020575-58020594 | None:intergenic | 25.0% |
| !! | ATCAAAAACAATTTGCTCAA+AGG | + | chr1.1:58022982-58023001 | None:intergenic | 25.0% |
| !! | ATGAAGAAAGTACGTATTTA+CGG | - | chr1.1:58021175-58021194 | MS.gene062191:intron | 25.0% |
| !! | GTTCTTTTGTATATACTGAT+AGG | - | chr1.1:58023017-58023036 | MS.gene062191:intron | 25.0% |
| !! | TAAAGTTGAACAATGGTTTT+AGG | + | chr1.1:58020024-58020043 | None:intergenic | 25.0% |
| !!! | AAAGTTGAACAATGGTTTTA+GGG | + | chr1.1:58020023-58020042 | None:intergenic | 25.0% |
| !!! | ACAAACAATTTTGACTTTAG+GGG | + | chr1.1:58023570-58023589 | None:intergenic | 25.0% |
| !!! | ATAAGCACTGAATACAATAA+TGG | + | chr1.1:58023443-58023462 | None:intergenic | 25.0% |
| !!! | TAGCAGTTATTTTATGGAAT+AGG | - | chr1.1:58023691-58023710 | MS.gene062191:intron | 25.0% |
| AATAAGTGAAATGCGCAATT+TGG | + | chr1.1:58019963-58019982 | None:intergenic | 30.0% | |
| AATCTCCTTCAAATGCAAAT+AGG | - | chr1.1:58022192-58022211 | MS.gene062191:intron | 30.0% | |
| AATGAAAACACTAGAAGTCA+AGG | + | chr1.1:58022949-58022968 | None:intergenic | 30.0% | |
| AGTTTGTCTGCAATAACAAA+AGG | + | chr1.1:58023232-58023251 | None:intergenic | 30.0% | |
| ATACATATGCAACATGAAGA+TGG | + | chr1.1:58021545-58021564 | None:intergenic | 30.0% | |
| ATCCTCCCTATTTATCTATT+TGG | - | chr1.1:58019611-58019630 | MS.gene062191:intron | 30.0% | |
| ATGAAAACACTAGAAGTCAA+GGG | + | chr1.1:58022948-58022967 | None:intergenic | 30.0% | |
| ATGCTAAAACATTTGCTTCT+TGG | - | chr1.1:58021951-58021970 | MS.gene062191:intron | 30.0% | |
| CAACCCCAAATAGATAAATA+GGG | + | chr1.1:58019619-58019638 | None:intergenic | 30.0% | |
| CAGGTGATATTGAAGATAAT+TGG | - | chr1.1:58022494-58022513 | MS.gene062191:intron | 30.0% | |
| GAAGATAATTGGAATAGGTA+AGG | - | chr1.1:58022505-58022524 | MS.gene062191:intron | 30.0% | |
| GACACATAAAATAGATAGTG+GGG | + | chr1.1:58019931-58019950 | None:intergenic | 30.0% | |
| GACTAGAATGATAAATGATC+AGG | + | chr1.1:58021121-58021140 | None:intergenic | 30.0% | |
| GGGTACCATTATCTTAATTT+AGG | - | chr1.1:58020662-58020681 | MS.gene062191:intron | 30.0% | |
| GTTGGTTATTAGTTCATATG+TGG | + | chr1.1:58023085-58023104 | None:intergenic | 30.0% | |
| TAATTAACTGTGTCTACAAC+TGG | - | chr1.1:58019564-58019583 | MS.gene062191:CDS | 30.0% | |
| TACATATGCAACATGAAGAT+GGG | + | chr1.1:58021544-58021563 | None:intergenic | 30.0% | |
| TAGATAGGTGTATATGTTGT+AGG | - | chr1.1:58023638-58023657 | MS.gene062191:intron | 30.0% | |
| TCCTCCCTATTTATCTATTT+GGG | - | chr1.1:58019612-58019631 | MS.gene062191:intron | 30.0% | |
| TGCTAAAACATTTGCTTCTT+GGG | - | chr1.1:58021952-58021971 | MS.gene062191:intron | 30.0% | |
| TTTCACCACATAGATAGTTA+TGG | + | chr1.1:58020984-58021003 | None:intergenic | 30.0% | |
| ! | AGCGGATTCAAACAATAAAT+GGG | - | chr1.1:58022669-58022688 | MS.gene062191:intron | 30.0% |
| ! | GAGTTTCTTTTTACATGTGA+TGG | - | chr1.1:58022748-58022767 | MS.gene062191:intron | 30.0% |
| ! | TGTCATACATTTTGCCAAAT+AGG | - | chr1.1:58022262-58022281 | MS.gene062191:intron | 30.0% |
| ! | TTAGTAAGTCTAGAATTTGG+AGG | + | chr1.1:58020572-58020591 | None:intergenic | 30.0% |
| !! | ACAAGGTAGCAGTTATTTTA+TGG | - | chr1.1:58023685-58023704 | MS.gene062191:intron | 30.0% |
| !! | TAGCGGATTCAAACAATAAA+TGG | - | chr1.1:58022668-58022687 | MS.gene062191:intron | 30.0% |
| !! | TTTGTTATTGCAGACAAACT+AGG | - | chr1.1:58023232-58023251 | MS.gene062191:intron | 30.0% |
| !!! | CTAGAACTTTTTCATATTGC+AGG | - | chr1.1:58021024-58021043 | MS.gene062191:intron | 30.0% |
| !!! | GAATGTAGGTTTTAGAACAA+CGG | + | chr1.1:58020054-58020073 | None:intergenic | 30.0% |
| !!! | GAGAGGATTTTTTTAAAGCT+CGG | + | chr1.1:58019819-58019838 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCAGACGATTGTT+GGG | - | chr1.1:58021344-58021363 | MS.gene062191:CDS | 30.0% |
| !!! | TTTTTTTTCCAGACGATTGT+TGG | - | chr1.1:58021343-58021362 | MS.gene062191:CDS | 30.0% |
| AAGCCTTAATGAAATCTGGA+AGG | - | chr1.1:58022301-58022320 | MS.gene062191:intron | 35.0% | |
| AATAACCGAGCATATGTTGA+TGG | + | chr1.1:58019365-58019384 | None:intergenic | 35.0% | |
| AATTATCACAGCTGATGCAA+TGG | - | chr1.1:58020616-58020635 | MS.gene062191:intron | 35.0% | |
| ACGAATGGTGTATGAAATCA+AGG | + | chr1.1:58023319-58023338 | None:intergenic | 35.0% | |
| AGAGAAATGGCATAGAATGT+AGG | + | chr1.1:58020068-58020087 | None:intergenic | 35.0% | |
| AGCATGAGAATCTATTTCAG+CGG | + | chr1.1:58023924-58023943 | None:intergenic | 35.0% | |
| AGCTTTGCTCTGACTTTAAA+TGG | - | chr1.1:58019732-58019751 | MS.gene062191:intron | 35.0% | |
| AGGAGACATCTTGTTGAAAA+TGG | - | chr1.1:58019419-58019438 | MS.gene062191:intron | 35.0% | |
| AGGCAACAATAATTGCATCT+TGG | - | chr1.1:58023724-58023743 | MS.gene062191:intron | 35.0% | |
| AGGTGTATATGTTGTAGGTT+TGG | - | chr1.1:58023643-58023662 | MS.gene062191:intron | 35.0% | |
| AGTGAAGCCTTAATGAAATC+TGG | - | chr1.1:58022297-58022316 | MS.gene062191:intron | 35.0% | |
| ATAAAGAGTAACTTACCCCA+TGG | + | chr1.1:58019462-58019481 | None:intergenic | 35.0% | |
| ATCAACAATAAGTGCAGAGT+TGG | + | chr1.1:58021244-58021263 | None:intergenic | 35.0% | |
| ATCGTTCTCATTTCAGCATA+TGG | - | chr1.1:58022878-58022897 | MS.gene062191:intron | 35.0% | |
| ATGTTCCATCAACATATGCT+CGG | - | chr1.1:58019357-58019376 | MS.gene062191:CDS | 35.0% | |
| CCAACCCCAAATAGATAAAT+AGG | + | chr1.1:58019620-58019639 | None:intergenic | 35.0% | |
| CCTCCCTATTTATCTATTTG+GGG | - | chr1.1:58019613-58019632 | MS.gene062191:intron | 35.0% | |
| GAAGTTATTGCAGTAAACCA+AGG | - | chr1.1:58023108-58023127 | MS.gene062191:intron | 35.0% | |
| GCTTTGCTCTGACTTTAAAT+GGG | - | chr1.1:58019733-58019752 | MS.gene062191:intron | 35.0% | |
| GGTGTATATGTTGTAGGTTT+GGG | - | chr1.1:58023644-58023663 | MS.gene062191:intron | 35.0% | |
| TAAAGAGTAACTTACCCCAT+GGG | + | chr1.1:58019461-58019480 | None:intergenic | 35.0% | |
| TAGATCTCTTGCATCAACAA+TGG | + | chr1.1:58023775-58023794 | None:intergenic | 35.0% | |
| TATAGTATGAATCTCTCAGG+TGG | - | chr1.1:58020432-58020451 | MS.gene062191:intron | 35.0% | |
| TCAACATATGCTCGGTTATT+AGG | - | chr1.1:58019365-58019384 | MS.gene062191:CDS | 35.0% | |
| TCGTTCTCATTTCAGCATAT+GGG | - | chr1.1:58022879-58022898 | MS.gene062191:intron | 35.0% | |
| TCTTCTTCTCAATGTGTGAA+TGG | - | chr1.1:58022328-58022347 | MS.gene062191:intron | 35.0% | |
| TGACCTTCCAGATTTCATTA+AGG | + | chr1.1:58022307-58022326 | None:intergenic | 35.0% | |
| TGATAGGCTCCTTTATTAGT+TGG | - | chr1.1:58023033-58023052 | MS.gene062191:intron | 35.0% | |
| TGTTGATGCAAGAGATCTAT+GGG | - | chr1.1:58023776-58023795 | MS.gene062191:intron | 35.0% | |
| TTCATTAAGGCTTCACTCAT+TGG | + | chr1.1:58022294-58022313 | None:intergenic | 35.0% | |
| TTGTTGATGCAAGAGATCTA+TGG | - | chr1.1:58023775-58023794 | MS.gene062191:intron | 35.0% | |
| ! | AAGAAACTCTTTTACTAGGG+AGG | + | chr1.1:58022737-58022756 | None:intergenic | 35.0% |
| ! | ATTTCATCTGGTGTCAATTC+CGG | - | chr1.1:58019694-58019713 | MS.gene062191:intron | 35.0% |
| ! | ATTTTGTGAAACATAGGGGA+TGG | - | chr1.1:58022422-58022441 | MS.gene062191:intron | 35.0% |
| ! | CAAAAAGTGTGGGAAATAGT+TGG | - | chr1.1:58022464-58022483 | MS.gene062191:intron | 35.0% |
| ! | CATCTTGTTGAAAATGGACT+TGG | - | chr1.1:58019425-58019444 | MS.gene062191:intron | 35.0% |
| ! | CCTATTTATCTATTTGGGGT+TGG | - | chr1.1:58019617-58019636 | MS.gene062191:intron | 35.0% |
| ! | GAAAGTATAGTTCGTGAAAC+AGG | - | chr1.1:58020488-58020507 | MS.gene062191:intron | 35.0% |
| ! | TTACGTGATGCGAATTTTCA+AGG | - | chr1.1:58020345-58020364 | MS.gene062191:intron | 35.0% |
| ! | TTTTGTGAAACATAGGGGAT+GGG | - | chr1.1:58022423-58022442 | MS.gene062191:intron | 35.0% |
| AAAGAGTAACTTACCCCATG+GGG | + | chr1.1:58019460-58019479 | None:intergenic | 40.0% | |
| AAAGTCAGAGCAAAGCTCTA+TGG | + | chr1.1:58019729-58019748 | None:intergenic | 40.0% | |
| AACATTTCCCTCAGGAATGA+AGG | - | chr1.1:58021729-58021748 | MS.gene062191:intron | 40.0% | |
| AAGGTCTAAGCCCTAAAGAA+AGG | - | chr1.1:58022160-58022179 | MS.gene062191:intron | 40.0% | |
| AATACTGCAACATTTCCCTC+AGG | - | chr1.1:58021721-58021740 | MS.gene062191:intron | 40.0% | |
| ACACCATTCGTACCATACTA+TGG | - | chr1.1:58023328-58023347 | MS.gene062191:intron | 40.0% | |
| ACATTTCCCTCAGGAATGAA+GGG | - | chr1.1:58021730-58021749 | MS.gene062191:intron | 40.0% | |
| ACCCTTGTCGTGAACATAAT+CGG | + | chr1.1:58021761-58021780 | None:intergenic | 40.0% | |
| ACTTGTAGTAAACGTATGCC+TGG | - | chr1.1:58021905-58021924 | MS.gene062191:intron | 40.0% | |
| AGGTAACAAAACAACGTCCA+AGG | - | chr1.1:58019385-58019404 | MS.gene062191:intron | 40.0% | |
| AGGTCCTCTAAGTGAAAACA+AGG | - | chr1.1:58023668-58023687 | MS.gene062191:intron | 40.0% | |
| ATGGAATAGGAGCTCAACAA+AGG | - | chr1.1:58023704-58023723 | MS.gene062191:intron | 40.0% | |
| ATTAAGGCTTCACTCATTGG+CGG | + | chr1.1:58022291-58022310 | None:intergenic | 40.0% | |
| ATTAGATCCTGACATGCTTG+AGG | - | chr1.1:58022825-58022844 | MS.gene062191:intron | 40.0% | |
| ATTGCATCTTGGTCTGACAT+AGG | - | chr1.1:58023735-58023754 | MS.gene062191:intron | 40.0% | |
| CCCCAAATAGATAAATAGGG+AGG | + | chr1.1:58019616-58019635 | None:intergenic | 40.0% | |
| GAGGGAAATGTTGCAGTATT+GGG | + | chr1.1:58021721-58021740 | None:intergenic | 40.0% | |
| GGAAATAGTTGGAGAACAAC+AGG | - | chr1.1:58022475-58022494 | MS.gene062191:intron | 40.0% | |
| GGGTGCAATATTAGACTAGA+TGG | + | chr1.1:58019503-58019522 | None:intergenic | 40.0% | |
| TAATTACCATTCCATCCTCC+AGG | + | chr1.1:58022709-58022728 | None:intergenic | 40.0% | |
| TACTGCAATAACTTCCGAGT+TGG | + | chr1.1:58023103-58023122 | None:intergenic | 40.0% | |
| TATATGTTGTAGGTTTGGGC+AGG | - | chr1.1:58023648-58023667 | MS.gene062191:intron | 40.0% | |
| TCAACGGGACTTGCAAATTT+GGG | - | chr1.1:58020641-58020660 | MS.gene062191:intron | 40.0% | |
| TCTCCTAATTACCTTCTCCT+TGG | + | chr1.1:58019405-58019424 | None:intergenic | 40.0% | |
| TGAGGGAAATGTTGCAGTAT+TGG | + | chr1.1:58021722-58021741 | None:intergenic | 40.0% | |
| TGCGTCTTTATCTCTCCAAA+TGG | + | chr1.1:58019866-58019885 | None:intergenic | 40.0% | |
| TGGTTGTGATATTCGTGCAA+TGG | - | chr1.1:58023053-58023072 | MS.gene062191:intron | 40.0% | |
| ! | AATAAATGGGCATCGTATGC+TGG | - | chr1.1:58022682-58022701 | MS.gene062191:intron | 40.0% |
| ! | ACGACAAGGGTTTAAAGTTG+GGG | - | chr1.1:58021770-58021789 | MS.gene062191:intron | 40.0% |
| ! | CACGACAAGGGTTTAAAGTT+GGG | - | chr1.1:58021769-58021788 | MS.gene062191:intron | 40.0% |
| ! | GGAGTAGCTGGAATCATTTT+GGG | - | chr1.1:58020453-58020472 | MS.gene062191:intron | 40.0% |
| ! | TCACGACAAGGGTTTAAAGT+TGG | - | chr1.1:58021768-58021787 | MS.gene062191:intron | 40.0% |
| ! | TGGAGTAGCTGGAATCATTT+TGG | - | chr1.1:58020452-58020471 | MS.gene062191:intron | 40.0% |
| !!! | GCTACCTTGTTTTCACTTAG+AGG | + | chr1.1:58023675-58023694 | None:intergenic | 40.0% |
| AAACGTATGCCTGGATCACT+GGG | - | chr1.1:58021914-58021933 | MS.gene062191:intron | 45.0% | |
| AAAGCTCGGTATCCAATCCA+GGG | + | chr1.1:58019805-58019824 | None:intergenic | 45.0% | |
| AAGAGTAACTTACCCCATGG+GGG | + | chr1.1:58019459-58019478 | None:intergenic | 45.0% | |
| AGCAACATGGGCAAAAAGTG+TGG | - | chr1.1:58022453-58022472 | MS.gene062191:intron | 45.0% | |
| AGCCGATTATGTTCACGACA+AGG | - | chr1.1:58021756-58021775 | MS.gene062191:intron | 45.0% | |
| AGGGTTGTTACGTACGAGTA+AGG | + | chr1.1:58020004-58020023 | None:intergenic | 45.0% | |
| ATCCTGACATGCTTGAGGTT+GGG | - | chr1.1:58022830-58022849 | MS.gene062191:intron | 45.0% | |
| CAAAACAACGTCCAAGGAGA+AGG | - | chr1.1:58019391-58019410 | MS.gene062191:intron | 45.0% | |
| CAACGGGACTTGCAAATTTG+GGG | - | chr1.1:58020642-58020661 | MS.gene062191:intron | 45.0% | |
| CATCGACATCTGCCATAGTA+TGG | + | chr1.1:58023343-58023362 | None:intergenic | 45.0% | |
| CCCTAGCATGACTTCTATAG+CGG | - | chr1.1:58022651-58022670 | MS.gene062191:intron | 45.0% | |
| CCGCTATAGAAGTCATGCTA+GGG | + | chr1.1:58022654-58022673 | None:intergenic | 45.0% | |
| CGTCCAAGGAGAAGGTAATT+AGG | - | chr1.1:58019399-58019418 | MS.gene062191:intron | 45.0% | |
| CTCTGAATCTCGATTGAGCT+CGG | + | chr1.1:58021370-58021389 | None:intergenic | 45.0% | |
| CTGCCATAGTATGGTACGAA+TGG | + | chr1.1:58023334-58023353 | None:intergenic | 45.0% | |
| CTTGCATCAACAATGGCTTC+TGG | + | chr1.1:58023768-58023787 | None:intergenic | 45.0% | |
| CTTGGAGTATGCTCATCTCA+AGG | - | chr1.1:58019660-58019679 | MS.gene062191:intron | 45.0% | |
| GCAGACAAACTAGGAGTTCA+AGG | - | chr1.1:58023241-58023260 | MS.gene062191:intron | 45.0% | |
| GCCGATTATGTTCACGACAA+GGG | - | chr1.1:58021757-58021776 | MS.gene062191:intron | 45.0% | |
| GCTAAACCCTTCATTCCTGA+GGG | + | chr1.1:58021739-58021758 | None:intergenic | 45.0% | |
| GGCAATTAGACTCATGGCTA+TGG | - | chr1.1:58019298-58019317 | MS.gene062191:CDS | 45.0% | |
| GTCAACGGGACTTGCAAATT+TGG | - | chr1.1:58020640-58020659 | MS.gene062191:intron | 45.0% | |
| GTCTCAGGTTCGATTTCATC+TGG | - | chr1.1:58019682-58019701 | MS.gene062191:intron | 45.0% | |
| TAAACGTATGCCTGGATCAC+TGG | - | chr1.1:58021913-58021932 | MS.gene062191:intron | 45.0% | |
| TAAAGCTCGGTATCCAATCC+AGG | + | chr1.1:58019806-58019825 | None:intergenic | 45.0% | |
| TATGCTCATCTCAAGGTCTC+AGG | - | chr1.1:58019667-58019686 | MS.gene062191:intron | 45.0% | |
| TCCGCTATAGAAGTCATGCT+AGG | + | chr1.1:58022655-58022674 | None:intergenic | 45.0% | |
| TGATGCAAGAGATCTATGGG+AGG | - | chr1.1:58023779-58023798 | MS.gene062191:intron | 45.0% | |
| TTAAGGCTTCACTCATTGGC+GGG | + | chr1.1:58022290-58022309 | None:intergenic | 45.0% | |
| ! | AGCTGATGCAATGGTGTCAA+CGG | - | chr1.1:58020625-58020644 | MS.gene062191:intron | 45.0% |
| ! | CAGCATATGGGCTTTAGCTA+AGG | - | chr1.1:58022891-58022910 | MS.gene062191:intron | 45.0% |
| ! | GCAACATGGGCAAAAAGTGT+GGG | - | chr1.1:58022454-58022473 | MS.gene062191:intron | 45.0% |
| !! | ACACTTTTTGCCCATGTTGC+TGG | + | chr1.1:58022454-58022473 | None:intergenic | 45.0% |
| !! | ATTGATCCCCTCGGATTAGT+CGG | - | chr1.1:58019778-58019797 | MS.gene062191:intron | 45.0% |
| !! | CACTTTTTGCCCATGTTGCT+GGG | + | chr1.1:58022453-58022472 | None:intergenic | 45.0% |
| !! | GTTGGCTTAGTGGTTGGTTT+GGG | - | chr1.1:58019635-58019654 | MS.gene062191:intron | 45.0% |
| !! | TAGTGGTTGGTTTGGGATCT+TGG | - | chr1.1:58019642-58019661 | MS.gene062191:intron | 45.0% |
| !! | TCTATTTGGGGTTGGCTTAG+TGG | - | chr1.1:58019625-58019644 | MS.gene062191:intron | 45.0% |
| !! | ATTATATTTATATTAAAATG+TGG | + | chr1.1:58020759-58020778 | None:intergenic | 5.0% |
| !! | CATATATTTATATTAAAATA+TGG | + | chr1.1:58020831-58020850 | None:intergenic | 5.0% |
| !! | TTTATAAAATTAAAAAACAA+AGG | + | chr1.1:58021604-58021623 | None:intergenic | 5.0% |
| !!! | AAATTAAAAGTATATATTAT+AGG | + | chr1.1:58021444-58021463 | None:intergenic | 5.0% |
| !!! | ACTTTTAATTTATTAATTAA+TGG | - | chr1.1:58021453-58021472 | MS.gene062191:intron | 5.0% |
| AATCTCACTGCCCACTTGCA+GGG | + | chr1.1:58019761-58019780 | None:intergenic | 50.0% | |
| AATCTCTCAGGTGGAGTAGC+TGG | - | chr1.1:58020441-58020460 | MS.gene062191:intron | 50.0% | |
| AGAGTAACTTACCCCATGGG+GGG | + | chr1.1:58019458-58019477 | None:intergenic | 50.0% | |
| AGCTCTATGGACTTGTCCAC+CGG | + | chr1.1:58019716-58019735 | None:intergenic | 50.0% | |
| ATGCTTGAGGTTGGGAATGG+AGG | - | chr1.1:58022838-58022857 | MS.gene062191:intron | 50.0% | |
| ATGGGAAGACCCAGCAACAT+GGG | - | chr1.1:58022441-58022460 | MS.gene062191:intron | 50.0% | |
| CGAGCTCAATCGAGATTCAG+AGG | - | chr1.1:58021368-58021387 | MS.gene062191:intron | 50.0% | |
| GACATGCTTGAGGTTGGGAA+TGG | - | chr1.1:58022835-58022854 | MS.gene062191:intron | 50.0% | |
| GATCCTGACATGCTTGAGGT+TGG | - | chr1.1:58022829-58022848 | MS.gene062191:intron | 50.0% | |
| GGCTAAACCCTTCATTCCTG+AGG | + | chr1.1:58021740-58021759 | None:intergenic | 50.0% | |
| TAAATGGGTCCCCTGCAAGT+GGG | - | chr1.1:58019748-58019767 | MS.gene062191:intron | 50.0% | |
| TCTTCATGTCCCAGTGATCC+AGG | + | chr1.1:58021926-58021945 | None:intergenic | 50.0% | |
| TGGGGATCTACTCAGATGCT+GGG | - | chr1.1:58021788-58021807 | MS.gene062191:intron | 50.0% | |
| TTAAATGGGTCCCCTGCAAG+TGG | - | chr1.1:58019747-58019766 | MS.gene062191:intron | 50.0% | |
| TTCCCAACCTCAAGCATGTC+AGG | + | chr1.1:58022835-58022854 | None:intergenic | 50.0% | |
| TTGGGGATCTACTCAGATGC+TGG | - | chr1.1:58021787-58021806 | MS.gene062191:intron | 50.0% | |
| ! | CTCATTGGCGGGTACCTATT+TGG | + | chr1.1:58022279-58022298 | None:intergenic | 50.0% |
| ! | GCTGATGCAATGGTGTCAAC+GGG | - | chr1.1:58020626-58020645 | MS.gene062191:intron | 50.0% |
| ! | TCATCTGGTGTCAATTCCGG+TGG | - | chr1.1:58019697-58019716 | MS.gene062191:intron | 50.0% |
| !! | GGTTGGCTTAGTGGTTGGTT+TGG | - | chr1.1:58019634-58019653 | MS.gene062191:intron | 50.0% |
| !! | TTTGGGGTTGGCTTAGTGGT+TGG | - | chr1.1:58019629-58019648 | MS.gene062191:intron | 50.0% |
| ATCTCACTGCCCACTTGCAG+GGG | + | chr1.1:58019760-58019779 | None:intergenic | 55.0% | |
| CAATCTCACTGCCCACTTGC+AGG | + | chr1.1:58019762-58019781 | None:intergenic | 55.0% | |
| GATGGGAAGACCCAGCAACA+TGG | - | chr1.1:58022440-58022459 | MS.gene062191:intron | 55.0% | |
| GGCAGTGAGATTGATCCCCT+CGG | - | chr1.1:58019769-58019788 | MS.gene062191:intron | 55.0% | |
| ! | ACTTGGTTTGACACCCCCCA+TGG | - | chr1.1:58019442-58019461 | MS.gene062191:intron | 55.0% |
| ! | CTTGGTTTGACACCCCCCAT+GGG | - | chr1.1:58019443-58019462 | MS.gene062191:intron | 55.0% |
| ! | TTGGTTTGACACCCCCCATG+GGG | - | chr1.1:58019444-58019463 | MS.gene062191:intron | 55.0% |
| !! | GGATTAGTCGGTCCCTGGAT+TGG | - | chr1.1:58019790-58019809 | MS.gene062191:intron | 55.0% |
| AGCTCGGCCCAACAATCGTC+TGG | + | chr1.1:58021354-58021373 | None:intergenic | 60.0% | |
| CAGGGACCGACTAATCCGAG+GGG | + | chr1.1:58019787-58019806 | None:intergenic | 60.0% | |
| CCAGGGACCGACTAATCCGA+GGG | + | chr1.1:58019788-58019807 | None:intergenic | 60.0% | |
| CGTATGCTGGACCTGGAGGA+TGG | - | chr1.1:58022695-58022714 | MS.gene062191:intron | 60.0% | |
| GCATCGTATGCTGGACCTGG+AGG | - | chr1.1:58022691-58022710 | MS.gene062191:intron | 60.0% | |
| GCTGGACCTGGAGGATGGAA+TGG | - | chr1.1:58022700-58022719 | MS.gene062191:intron | 60.0% | |
| TCCAGGGACCGACTAATCCG+AGG | + | chr1.1:58019789-58019808 | None:intergenic | 60.0% | |
| ! | TGGGCATCGTATGCTGGACC+TGG | - | chr1.1:58022688-58022707 | MS.gene062191:intron | 60.0% |
| !! | CCCTCGGATTAGTCGGTCCC+TGG | - | chr1.1:58019785-58019804 | MS.gene062191:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 58019296 | 58023976 | 58019296 | ID=MS.gene062191 |
| chr1.1 | mRNA | 58019296 | 58023976 | 58019296 | ID=MS.gene062191.t1;Parent=MS.gene062191 |
| chr1.1 | exon | 58023807 | 58023976 | 58023807 | ID=MS.gene062191.t1.exon1;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58023807 | 58023976 | 58023807 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58022763 | 58022821 | 58022763 | ID=MS.gene062191.t1.exon2;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58022763 | 58022821 | 58022763 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58022589 | 58022645 | 58022589 | ID=MS.gene062191.t1.exon3;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58022589 | 58022645 | 58022589 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58021883 | 58021917 | 58021883 | ID=MS.gene062191.t1.exon4;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58021883 | 58021917 | 58021883 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58021463 | 58021566 | 58021463 | ID=MS.gene062191.t1.exon5;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58021463 | 58021566 | 58021463 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58021299 | 58021374 | 58021299 | ID=MS.gene062191.t1.exon6;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58021299 | 58021374 | 58021299 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58021091 | 58021149 | 58021091 | ID=MS.gene062191.t1.exon7;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58021091 | 58021149 | 58021091 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58020923 | 58020988 | 58020923 | ID=MS.gene062191.t1.exon8;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58020923 | 58020988 | 58020923 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58020751 | 58020834 | 58020751 | ID=MS.gene062191.t1.exon9;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58020751 | 58020834 | 58020751 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58020551 | 58020615 | 58020551 | ID=MS.gene062191.t1.exon10;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58020551 | 58020615 | 58020551 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58020360 | 58020442 | 58020360 | ID=MS.gene062191.t1.exon11;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58020360 | 58020442 | 58020360 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58020143 | 58020233 | 58020143 | ID=MS.gene062191.t1.exon12;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58020143 | 58020233 | 58020143 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58019978 | 58020027 | 58019978 | ID=MS.gene062191.t1.exon13;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58019978 | 58020027 | 58019978 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58019472 | 58019612 | 58019472 | ID=MS.gene062191.t1.exon14;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58019472 | 58019612 | 58019472 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| chr1.1 | exon | 58019296 | 58019385 | 58019296 | ID=MS.gene062191.t1.exon15;Parent=MS.gene062191.t1 |
| chr1.1 | CDS | 58019296 | 58019385 | 58019296 | ID=cds.MS.gene062191.t1;Parent=MS.gene062191.t1 |
| Gene Sequence |
| Protein sequence |
