Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064082.t1 | XP_013453257.1 | 95.1 | 812 | 38 | 2 | 1 | 812 | 1 | 810 | 0.00E+00 | 1493.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064082.t1 | F4IK92 | 41.0 | 825 | 452 | 17 | 1 | 812 | 14 | 816 | 2.1e-146 | 521.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064082.t1 | A0A072UCW5 | 95.1 | 812 | 38 | 2 | 1 | 812 | 1 | 810 | 0.0e+00 | 1493.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene064082 | 0.822888 | 1.86E-53 | -1.69E-46 |
| MS.gene049418 | MS.gene064082 | 0.820204 | 7.76E-53 | -1.69E-46 |
| MS.gene04985 | MS.gene064082 | 0.81035 | 1.20E-50 | -1.69E-46 |
| MS.gene049989 | MS.gene064082 | 0.881324 | 2.64E-70 | -1.69E-46 |
| MS.gene050297 | MS.gene064082 | 0.880364 | 5.84E-70 | -1.69E-46 |
| MS.gene050310 | MS.gene064082 | 0.813935 | 1.99E-51 | -1.69E-46 |
| MS.gene050648 | MS.gene064082 | 0.834063 | 3.72E-56 | -1.69E-46 |
| MS.gene051067 | MS.gene064082 | 0.808857 | 2.52E-50 | -1.69E-46 |
| MS.gene051094 | MS.gene064082 | 0.829984 | 3.79E-55 | -1.69E-46 |
| MS.gene051263 | MS.gene064082 | 0.831497 | 1.61E-55 | -1.69E-46 |
| MS.gene051478 | MS.gene064082 | 0.809735 | 1.63E-50 | -1.69E-46 |
| MS.gene051629 | MS.gene064082 | 0.839848 | 1.24E-57 | -1.69E-46 |
| MS.gene052367 | MS.gene064082 | 0.824201 | 9.18E-54 | -1.69E-46 |
| MS.gene053416 | MS.gene064082 | 0.835038 | 2.12E-56 | -1.69E-46 |
| MS.gene053417 | MS.gene064082 | 0.836278 | 1.03E-56 | -1.69E-46 |
| MS.gene053929 | MS.gene064082 | 0.811768 | 5.93E-51 | -1.69E-46 |
| MS.gene055957 | MS.gene064082 | 0.84117 | 5.59E-58 | -1.69E-46 |
| MS.gene056041 | MS.gene064082 | 0.827794 | 1.28E-54 | -1.69E-46 |
| MS.gene056042 | MS.gene064082 | 0.830848 | 2.33E-55 | -1.69E-46 |
| MS.gene056169 | MS.gene064082 | 0.817663 | 2.93E-52 | -1.69E-46 |
| MS.gene056228 | MS.gene064082 | 0.852781 | 3.69E-61 | -1.69E-46 |
| MS.gene056526 | MS.gene064082 | 0.821679 | 3.55E-53 | -1.69E-46 |
| MS.gene057004 | MS.gene064082 | 0.808125 | 3.61E-50 | -1.69E-46 |
| MS.gene058196 | MS.gene064082 | 0.826492 | 2.63E-54 | -1.69E-46 |
| MS.gene058197 | MS.gene064082 | 0.85594 | 4.50E-62 | -1.69E-46 |
| MS.gene058198 | MS.gene064082 | 0.856955 | 2.27E-62 | -1.69E-46 |
| MS.gene059300 | MS.gene064082 | 0.883613 | 3.87E-71 | -1.69E-46 |
| MS.gene060473 | MS.gene064082 | 0.835462 | 1.65E-56 | -1.69E-46 |
| MS.gene060565 | MS.gene064082 | 0.8411 | 5.83E-58 | -1.69E-46 |
| MS.gene06057 | MS.gene064082 | 0.884053 | 2.66E-71 | -1.69E-46 |
| MS.gene061260 | MS.gene064082 | 0.822731 | 2.02E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064082.t1 | MTR_6g093150 | 95.074 | 812 | 38 | 2 | 1 | 812 | 1 | 810 | 0.0 | 1593 |
| MS.gene064082.t1 | MTR_6g093150 | 94.389 | 606 | 32 | 2 | 207 | 812 | 50 | 653 | 0.0 | 1177 |
| MS.gene064082.t1 | MTR_3g050060 | 25.685 | 876 | 529 | 19 | 12 | 787 | 27 | 880 | 1.16e-68 | 244 |
| MS.gene064082.t1 | MTR_3g050060 | 25.143 | 875 | 546 | 19 | 12 | 787 | 27 | 891 | 1.74e-67 | 241 |
| MS.gene064082.t1 | MTR_4g107110 | 36.268 | 284 | 176 | 1 | 7 | 290 | 1 | 279 | 1.24e-50 | 185 |
| MS.gene064082.t1 | MTR_4g107110 | 36.268 | 284 | 176 | 1 | 7 | 290 | 1 | 279 | 1.61e-49 | 185 |
| MS.gene064082.t1 | MTR_5g036950 | 26.950 | 564 | 348 | 13 | 13 | 556 | 22 | 541 | 4.12e-44 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064082.t1 | AT2G07170 | 41.963 | 815 | 437 | 16 | 11 | 812 | 25 | 816 | 0.0 | 567 |
| MS.gene064082.t1 | AT1G27210 | 30.669 | 538 | 325 | 12 | 12 | 548 | 34 | 524 | 4.35e-53 | 195 |
| MS.gene064082.t1 | AT4G27060 | 36.949 | 295 | 177 | 4 | 12 | 299 | 41 | 333 | 6.34e-49 | 186 |
| MS.gene064082.t1 | AT4G27060 | 21.978 | 364 | 227 | 12 | 494 | 812 | 504 | 855 | 3.52e-19 | 93.6 |
| MS.gene064082.t1 | AT1G50890 | 33.564 | 289 | 181 | 5 | 12 | 291 | 36 | 322 | 7.83e-45 | 174 |
| MS.gene064082.t1 | AT1G50890 | 24.731 | 279 | 193 | 7 | 501 | 772 | 503 | 771 | 9.69e-17 | 85.5 |
| MS.gene064082.t1 | AT1G59850 | 33.333 | 282 | 181 | 2 | 12 | 291 | 21 | 297 | 8.33e-37 | 145 |
| MS.gene064082.t1 | AT5G62580 | 32.056 | 287 | 181 | 5 | 14 | 290 | 7 | 289 | 8.91e-34 | 138 |
| MS.gene064082.t1 | AT5G62580 | 32.056 | 287 | 181 | 5 | 14 | 290 | 7 | 289 | 8.91e-34 | 138 |
Find 157 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGTTCTTGTCATCTTTA+AGG | 0.084954 | 6.4:-63716403 | MS.gene064082:CDS |
| TTTAGGATCCTGCATCTTTA+TGG | 0.153457 | 6.4:+63715378 | None:intergenic |
| AAATTATCCTCTCTGACTTT+TGG | 0.155108 | 6.4:+63714491 | None:intergenic |
| TTGGCTCTGCCTCACAAATT+TGG | 0.181166 | 6.4:+63714703 | None:intergenic |
| CACAACATTGATGTGTAATT+TGG | 0.196160 | 6.4:+63715323 | None:intergenic |
| AACAACCGCAGCAACAATTT+TGG | 0.226264 | 6.4:+63716880 | None:intergenic |
| ATGGATAAACTTTCTATAAC+TGG | 0.262628 | 6.4:+63714230 | None:intergenic |
| TCCTGGGAGAAGCGACATTT+TGG | 0.275170 | 6.4:+63714684 | None:intergenic |
| GTTGAATAGGTGTATTATTC+AGG | 0.277892 | 6.4:-63716555 | MS.gene064082:CDS |
| GGTGAAAAGTAGTGAAAGTT+TGG | 0.278968 | 6.4:-63714600 | MS.gene064082:CDS |
| CAGGATGTGGGTTATGAATA+TGG | 0.288308 | 6.4:-63715556 | MS.gene064082:CDS |
| TTCGTTCTTGTCATCTTTAA+GGG | 0.289104 | 6.4:-63716402 | MS.gene064082:CDS |
| TTATCTCAAGAATCTTTAAA+AGG | 0.289916 | 6.4:-63714752 | MS.gene064082:CDS |
| TAAATATTGGAAAATGCTTC+CGG | 0.292412 | 6.4:-63716198 | MS.gene064082:CDS |
| ACAACATTGATGTGTAATTT+GGG | 0.297728 | 6.4:+63715324 | None:intergenic |
| TACTCTCAAACTCTTCATTA+TGG | 0.299131 | 6.4:+63715629 | None:intergenic |
| CTGCTGCAGCCATGGGATTA+TGG | 0.311128 | 6.4:+63714142 | None:intergenic |
| CACTTTAGCACCGTATCTTC+TGG | 0.313958 | 6.4:-63714183 | MS.gene064082:CDS |
| AACGGTTTGCTTCTCACATT+TGG | 0.314748 | 6.4:+63715436 | None:intergenic |
| AGATCTAAACTCTGCATATA+TGG | 0.315587 | 6.4:-63714309 | MS.gene064082:CDS |
| AACGTGCCAATCATCTCTTT+TGG | 0.320011 | 6.4:+63715690 | None:intergenic |
| ATTGAAAGAGCAATGCAATT+TGG | 0.320218 | 6.4:+63713691 | None:intergenic |
| CAATAAAATTACATCATATC+TGG | 0.334865 | 6.4:-63713576 | MS.gene064082:CDS |
| CCAACAAGAGCATCGAAAAT+AGG | 0.336403 | 6.4:+63716737 | None:intergenic |
| GAGAATTGTTTCGAGTTCTT+TGG | 0.336737 | 6.4:+63717051 | None:intergenic |
| CACGCGGAATCCTCCTGTTT+CGG | 0.343898 | 6.4:-63716654 | MS.gene064082:CDS |
| TGTGAGAAGCAAACCGTTAG+AGG | 0.344735 | 6.4:-63715431 | MS.gene064082:CDS |
| CTAGTTTCTGAAGATGGCTT+TGG | 0.352507 | 6.4:+63714647 | None:intergenic |
| CCAAGCCTACCATTCTTGAT+TGG | 0.357127 | 6.4:+63714792 | None:intergenic |
| ACTACCGAGCCTTCAGAAAC+TGG | 0.367334 | 6.4:-63716167 | MS.gene064082:CDS |
| AAACATGATGCATCAGTTAC+AGG | 0.369760 | 6.4:-63715236 | MS.gene064082:intron |
| TTCCACTACAGAATGTGTTC+TGG | 0.378816 | 6.4:+63715654 | None:intergenic |
| AGGATAATTTGAACTGCTTA+GGG | 0.382496 | 6.4:-63714478 | MS.gene064082:CDS |
| GAGGATAATTTGAACTGCTT+AGG | 0.390712 | 6.4:-63714479 | MS.gene064082:CDS |
| ACCATTTCTAGCATTGGTTC+TGG | 0.391155 | 6.4:+63714391 | None:intergenic |
| GATCGAGACACACACGATAT+CGG | 0.403024 | 6.4:-63717076 | MS.gene064082:CDS |
| TGCGTTGGGACAAATTGCTT+TGG | 0.405945 | 6.4:-63716432 | MS.gene064082:CDS |
| TTAGTACTAGTTTCTGAAGA+TGG | 0.408101 | 6.4:+63714641 | None:intergenic |
| TGGAGTGCATACGGAGATCC+TGG | 0.410874 | 6.4:+63714667 | None:intergenic |
| ATACCATACAAAACCGAAAC+AGG | 0.420721 | 6.4:+63716641 | None:intergenic |
| CCAGTAGTTTGTGTTACTCT+CGG | 0.422069 | 6.4:+63714361 | None:intergenic |
| CAAATGAAATGACTTGTATT+CGG | 0.426495 | 6.4:-63715291 | MS.gene064082:CDS |
| TTCAGATATTGAAATCAAAC+AGG | 0.427865 | 6.4:-63715260 | MS.gene064082:CDS |
| CACAATGCATTAAACAAAGT+TGG | 0.432006 | 6.4:-63717100 | MS.gene064082:CDS |
| TTGCTTCTCACATTTGGCTT+CGG | 0.433575 | 6.4:+63715442 | None:intergenic |
| AAATATTGGAAAATGCTTCC+GGG | 0.434596 | 6.4:-63716197 | MS.gene064082:CDS |
| GAGCCTAACATCTCTATGTC+TGG | 0.437595 | 6.4:+63715801 | None:intergenic |
| CTGCGTTGATTGAGTTGAAT+AGG | 0.437729 | 6.4:-63716568 | MS.gene064082:CDS |
| TATATGGAAGCTTTGTGTTC+CGG | 0.441349 | 6.4:-63714293 | MS.gene064082:CDS |
| ATTACTACTCAGCTTGTTGT+TGG | 0.446978 | 6.4:+63717144 | None:intergenic |
| CCTTCTCTAACAGAAGAATC+TGG | 0.448809 | 6.4:+63716842 | None:intergenic |
| TTCTTGATTGGATTGTAGAA+AGG | 0.451684 | 6.4:+63714804 | None:intergenic |
| GCTTTGAAATTAGCGAATCA+AGG | 0.460154 | 6.4:-63716794 | MS.gene064082:CDS |
| AGGAATGAGGAGATGGAATG+TGG | 0.463881 | 6.4:+63717016 | None:intergenic |
| AGGGTTTGAAAGATACGGAT+TGG | 0.465253 | 6.4:-63716478 | MS.gene064082:CDS |
| CAGTAGTTTGTGTTACTCTC+GGG | 0.467032 | 6.4:+63714362 | None:intergenic |
| TCCACTACAGAATGTGTTCT+GGG | 0.471821 | 6.4:+63715655 | None:intergenic |
| TAGAGAGGGTTTGAAAGATA+CGG | 0.472957 | 6.4:-63716483 | MS.gene064082:CDS |
| AAAGCGGCTTCTGTTGCGTT+GGG | 0.473923 | 6.4:-63716446 | MS.gene064082:CDS |
| GAGCAAAGGTAAACCTTTGA+AGG | 0.475464 | 6.4:+63716139 | None:intergenic |
| TCTTGATTGGATTGTAGAAA+GGG | 0.477546 | 6.4:+63714805 | None:intergenic |
| AACTTGCCTGCTGCAGCCAT+GGG | 0.477757 | 6.4:+63714135 | None:intergenic |
| GCAAGAGAGGAATGAGGAGA+TGG | 0.478087 | 6.4:+63717009 | None:intergenic |
| AGGACAACCATTTCTAGCAT+TGG | 0.479539 | 6.4:+63714385 | None:intergenic |
| GAAACTGGATCCTCCTTCAA+AGG | 0.479927 | 6.4:-63716152 | MS.gene064082:intron |
| GAAACTAGTACTAAGCAATC+AGG | 0.487912 | 6.4:-63714632 | MS.gene064082:CDS |
| CATTGTTTACAAAGCAGTCA+TGG | 0.488796 | 6.4:+63715470 | None:intergenic |
| ACATCAATGTTGTGTACAAA+GGG | 0.488994 | 6.4:-63715314 | MS.gene064082:CDS |
| GAACTTGCCTGCTGCAGCCA+TGG | 0.490305 | 6.4:+63714134 | None:intergenic |
| ACTTAATATGAAATCAACTA+CGG | 0.491293 | 6.4:-63715773 | MS.gene064082:CDS |
| AGTCCAGACATAGAGATGTT+AGG | 0.496261 | 6.4:-63715804 | MS.gene064082:CDS |
| CCAATCAAGAATGGTAGGCT+TGG | 0.497219 | 6.4:-63714792 | MS.gene064082:CDS |
| TAAAGCGGCTTCTGTTGCGT+TGG | 0.497925 | 6.4:-63716447 | MS.gene064082:CDS |
| TAAACTTTCTATAACTGGAC+CGG | 0.499508 | 6.4:+63714235 | None:intergenic |
| GCCAAAATGTCGCTTCTCCC+AGG | 0.502514 | 6.4:-63714685 | MS.gene064082:CDS |
| GTCATCCCAAAAGAGATGAT+TGG | 0.502641 | 6.4:-63715696 | MS.gene064082:CDS |
| CATAATCCCATGGCTGCAGC+AGG | 0.504288 | 6.4:-63714141 | MS.gene064082:intron |
| AAAGCATGTCAAAATGATGT+TGG | 0.506304 | 6.4:-63715727 | MS.gene064082:CDS |
| TCTGCTCAAGTGAGAAAGAA+TGG | 0.511359 | 6.4:-63714434 | MS.gene064082:CDS |
| CCGAGAGTAACACAAACTAC+TGG | 0.513150 | 6.4:-63714361 | MS.gene064082:CDS |
| GTTGAGCTTCTGAATAAAAC+CGG | 0.517186 | 6.4:-63714254 | MS.gene064082:CDS |
| ACTCATTGTTTGTAGCGGCT+TGG | 0.517709 | 6.4:+63715597 | None:intergenic |
| TGTAAAACCGCATCCCTCAC+TGG | 0.518045 | 6.4:+63716227 | None:intergenic |
| GCCAGAACCAATGCTAGAAA+TGG | 0.519664 | 6.4:-63714392 | MS.gene064082:CDS |
| CAACTTATTACTTCCTCTAA+CGG | 0.520424 | 6.4:+63715418 | None:intergenic |
| CCAGATTCTTCTGTTAGAGA+AGG | 0.522317 | 6.4:-63716842 | MS.gene064082:CDS |
| CACATCAATGTTGTGTACAA+AGG | 0.523686 | 6.4:-63715315 | MS.gene064082:CDS |
| AATAGGTGTATTATTCAGGC+TGG | 0.528873 | 6.4:-63716551 | MS.gene064082:CDS |
| TTCTACAATCCAATCAAGAA+TGG | 0.529982 | 6.4:-63714801 | MS.gene064082:CDS |
| TGTTACAAGCATGCAGGATG+TGG | 0.535835 | 6.4:-63715569 | MS.gene064082:CDS |
| AATGTACTCCATAAAGATGC+AGG | 0.536807 | 6.4:-63715386 | MS.gene064082:CDS |
| AAGGAGGATCCAGTTTCTGA+AGG | 0.539883 | 6.4:+63716158 | None:intergenic |
| TGTAATTTGGGGACTTGACT+CGG | 0.540972 | 6.4:+63715336 | None:intergenic |
| CTCCAGCATGAATCCTCGGT+TGG | 0.542014 | 6.4:+63714555 | None:intergenic |
| TGGGCCTATGGATGACAAGC+AGG | 0.545178 | 6.4:-63715536 | MS.gene064082:CDS |
| AACATCTCTATGTCTGGACT+CGG | 0.546866 | 6.4:+63715807 | None:intergenic |
| CATGACTGCTTTGTAAACAA+TGG | 0.547183 | 6.4:-63715469 | MS.gene064082:CDS |
| AGATGGCTTTGGAGTGCATA+CGG | 0.548202 | 6.4:+63714658 | None:intergenic |
| GGGTTATGAATATGGGCCTA+TGG | 0.549080 | 6.4:-63715548 | MS.gene064082:CDS |
| GAATCAAGGTAATGAAGATA+AGG | 0.552496 | 6.4:-63716780 | MS.gene064082:CDS |
| ATTGTTTACAAAGCAGTCAT+GGG | 0.553394 | 6.4:+63715471 | None:intergenic |
| CTTAATATGAAATCAACTAC+GGG | 0.555405 | 6.4:-63715772 | MS.gene064082:CDS |
| CTATCTCCAGCATGAATCCT+CGG | 0.562259 | 6.4:+63714551 | None:intergenic |
| TCTCAAGAATCTTTAAAAGG+AGG | 0.564666 | 6.4:-63714749 | MS.gene064082:CDS |
| AGCATTGGTTCTGGCAGCAG+AGG | 0.565867 | 6.4:+63714400 | None:intergenic |
| CAGAAAACTCCAAATTTGTG+AGG | 0.569734 | 6.4:-63714712 | MS.gene064082:CDS |
| ACAATCCAATCAAGAATGGT+AGG | 0.573841 | 6.4:-63714797 | MS.gene064082:CDS |
| GCAGGTTTCGCCATAAAATG+TGG | 0.574624 | 6.4:+63716587 | None:intergenic |
| AGGATGTGGGTTATGAATAT+GGG | 0.575148 | 6.4:-63715555 | MS.gene064082:CDS |
| GGCTGTTGGTAGTATTAGAG+AGG | 0.583720 | 6.4:-63716498 | MS.gene064082:CDS |
| AGCCAACCGAGGATTCATGC+TGG | 0.584954 | 6.4:-63714557 | MS.gene064082:CDS |
| TGATTCCTCGAGGTTTGACA+AGG | 0.586369 | 6.4:-63716360 | MS.gene064082:intron |
| GGATCCAGTTTCTGAAGGCT+CGG | 0.586766 | 6.4:+63716163 | None:intergenic |
| AGGTTGTATTGAAATGTTCG+CGG | 0.587532 | 6.4:-63716822 | MS.gene064082:CDS |
| TTCATTCTCTTGATTCCTCG+AGG | 0.588058 | 6.4:-63716370 | MS.gene064082:CDS |
| AGGTGTATTATTCAGGCTGG+TGG | 0.594436 | 6.4:-63716548 | MS.gene064082:CDS |
| GAGAATGCAAGAGAGGAATG+AGG | 0.599531 | 6.4:+63717003 | None:intergenic |
| TCAAGACTCATTGTTTGTAG+CGG | 0.603027 | 6.4:+63715592 | None:intergenic |
| ATCTCTATGTCTGGACTCGG+TGG | 0.603533 | 6.4:+63715810 | None:intergenic |
| AACGAGAATAAGTTCGTCAC+CGG | 0.604731 | 6.4:+63714274 | None:intergenic |
| GGAGTGCATACGGAGATCCT+GGG | 0.608022 | 6.4:+63714668 | None:intergenic |
| CCCCAGAACACATTCTGTAG+TGG | 0.608984 | 6.4:-63715656 | MS.gene064082:CDS |
| CAACATTGATGTGTAATTTG+GGG | 0.611777 | 6.4:+63715325 | None:intergenic |
| AATGCAATTTGGTCCGTGGA+CGG | 0.613979 | 6.4:+63713702 | None:intergenic |
| TTAGCACCGTATCTTCTGGA+AGG | 0.614062 | 6.4:-63714179 | MS.gene064082:CDS |
| GGTGAAACCAGTGAGGGATG+CGG | 0.615202 | 6.4:-63716234 | MS.gene064082:CDS |
| GGATAATTTGAACTGCTTAG+GGG | 0.616156 | 6.4:-63714477 | MS.gene064082:CDS |
| GATTCATGCTGGAGATAGTG+TGG | 0.617649 | 6.4:-63714546 | MS.gene064082:CDS |
| TAATTTGAACTGCTTAGGGG+AGG | 0.618224 | 6.4:-63714474 | MS.gene064082:CDS |
| GTTGAAATGAGCACCGTCCA+CGG | 0.618871 | 6.4:-63713715 | MS.gene064082:CDS |
| GAGCAATGCAATTTGGTCCG+TGG | 0.621953 | 6.4:+63713698 | None:intergenic |
| TCTCACCAAAATTGTTGCTG+CGG | 0.626501 | 6.4:-63716885 | MS.gene064082:CDS |
| GGATATGTGTAAAAGTTACA+AGG | 0.626865 | 6.4:-63714525 | MS.gene064082:CDS |
| ATATGAAATCAACTACGGGA+AGG | 0.627700 | 6.4:-63715768 | MS.gene064082:CDS |
| GCTGTTGGTAGTATTAGAGA+GGG | 0.629368 | 6.4:-63716497 | MS.gene064082:CDS |
| GAATGTCGAGAATGCAAGAG+AGG | 0.629620 | 6.4:+63716996 | None:intergenic |
| GGCTCGGTAGTATAATGACC+CGG | 0.630775 | 6.4:+63716179 | None:intergenic |
| CACTCCTGCTTGTCATCCAT+AGG | 0.633163 | 6.4:+63715532 | None:intergenic |
| TGGAATGTGGAGTTAATGAG+TGG | 0.637506 | 6.4:+63717029 | None:intergenic |
| TCTTGATGTTACAAGCATGC+AGG | 0.641520 | 6.4:-63715575 | MS.gene064082:CDS |
| TAGTTTGTGTTACTCTCGGG+AGG | 0.642716 | 6.4:+63714365 | None:intergenic |
| GGATTGGAAAACACGTAAAG+CGG | 0.647564 | 6.4:-63716462 | MS.gene064082:CDS |
| TATAAGAGATTCATAAACAG+TGG | 0.652703 | 6.4:+63716916 | None:intergenic |
| ATTATAGGTGAAACCAGTGA+GGG | 0.652743 | 6.4:-63716240 | MS.gene064082:intron |
| CAAAGGTAAACCTTTGAAGG+AGG | 0.653235 | 6.4:+63716142 | None:intergenic |
| CTGGTATTGTACAAAACACG+CGG | 0.655159 | 6.4:-63716670 | MS.gene064082:CDS |
| CTATTCAACTCAATCAACGC+AGG | 0.655568 | 6.4:+63716569 | None:intergenic |
| TCTACAGAAAATATCTGCGG+AGG | 0.664334 | 6.4:-63715865 | MS.gene064082:intron |
| CCATACAAAACCGAAACAGG+AGG | 0.673672 | 6.4:+63716644 | None:intergenic |
| GTTACAAGCATGCAGGATGT+GGG | 0.676382 | 6.4:-63715568 | MS.gene064082:CDS |
| TATCTGCGGAGGTGACTCTG+TGG | 0.685008 | 6.4:-63715854 | MS.gene064082:CDS |
| CTTTCTACAGAAAATATCTG+CGG | 0.688105 | 6.4:-63715868 | MS.gene064082:intron |
| GACTGCCCCAAAAGTCAGAG+AGG | 0.694271 | 6.4:-63714498 | MS.gene064082:CDS |
| GATTATAGGTGAAACCAGTG+AGG | 0.696142 | 6.4:-63716241 | MS.gene064082:intron |
| CCACTACAGAATGTGTTCTG+GGG | 0.711381 | 6.4:+63715656 | None:intergenic |
| GTGAATCGTCTTGTATGTGA+AGG | 0.716670 | 6.4:-63714332 | MS.gene064082:CDS |
| AATCACCTTGTCAAACCTCG+AGG | 0.724129 | 6.4:+63716355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGAAAAATAACTAATTA+AGG | - | chr6.4:63716671-63716690 | MS.gene064082:CDS | 10.0% |
| !! | ATATATTAATAATCGATTAT+AGG | - | chr6.4:63714471-63714490 | MS.gene064082:CDS | 10.0% |
| !! | TACACTTATAATTTAGTTAA+CGG | + | chr6.4:63714452-63714471 | None:intergenic | 15.0% |
| !!! | AATATGAATATTGTAACTTT+TGG | - | chr6.4:63715768-63715787 | MS.gene064082:CDS | 15.0% |
| !!! | TAATTTTTATTTTCTTCTGA+TGG | - | chr6.4:63716793-63716812 | MS.gene064082:CDS | 15.0% |
| !!! | TTGATTTCATATTAAGTTTT+TGG | + | chr6.4:63714950-63714969 | None:intergenic | 15.0% |
| !! | ACTTAATATGAAATCAACTA+CGG | - | chr6.4:63714953-63714972 | MS.gene064082:intron | 20.0% |
| !! | AGGATATATATAAAGACATT+TGG | - | chr6.4:63714660-63714679 | MS.gene064082:CDS | 20.0% |
| !! | CAATAAAATTACATCATATC+TGG | - | chr6.4:63717150-63717169 | MS.gene064082:CDS | 20.0% |
| !! | GATATCAAAATTCAAAAAGA+GGG | + | chr6.4:63714618-63714637 | None:intergenic | 20.0% |
| !! | TGATATCAAAATTCAAAAAG+AGG | + | chr6.4:63714619-63714638 | None:intergenic | 20.0% |
| !! | TTATCTCAAGAATCTTTAAA+AGG | - | chr6.4:63715974-63715993 | MS.gene064082:intron | 20.0% |
| !! | TTTGATATCAATATTGCTAT+TGG | - | chr6.4:63714629-63714648 | MS.gene064082:CDS | 20.0% |
| !!! | TTTTACAAGCTCTTAAATAT+TGG | - | chr6.4:63714515-63714534 | MS.gene064082:CDS | 20.0% |
| ! | AAACAAGAACACTATCTAAT+TGG | + | chr6.4:63714700-63714719 | None:intergenic | 25.0% |
| ! | AACAAGAACACTATCTAATT+GGG | + | chr6.4:63714699-63714718 | None:intergenic | 25.0% |
| ! | ACAACATTGATGTGTAATTT+GGG | + | chr6.4:63715405-63715424 | None:intergenic | 25.0% |
| ! | ATAAATGAGCTACTGTATAT+CGG | + | chr6.4:63715591-63715610 | None:intergenic | 25.0% |
| ! | ATGGATAAACTTTCTATAAC+TGG | + | chr6.4:63716499-63716518 | None:intergenic | 25.0% |
| ! | CTTAATATGAAATCAACTAC+GGG | - | chr6.4:63714954-63714973 | MS.gene064082:intron | 25.0% |
| ! | GTTAAACAATTTAATAACCC+AGG | + | chr6.4:63716887-63716906 | None:intergenic | 25.0% |
| ! | TAAATATTGGAAAATGCTTC+CGG | - | chr6.4:63714528-63714547 | MS.gene064082:CDS | 25.0% |
| ! | TATAAGAGATTCATAAACAG+TGG | + | chr6.4:63713813-63713832 | None:intergenic | 25.0% |
| ! | TGATTGCTAATCTTATACAT+TGG | - | chr6.4:63714807-63714826 | MS.gene064082:CDS | 25.0% |
| ! | TTCAGATATTGAAATCAAAC+AGG | - | chr6.4:63715466-63715485 | MS.gene064082:CDS | 25.0% |
| !! | AATGCTTTGAATACCATTTA+AGG | + | chr6.4:63716734-63716753 | None:intergenic | 25.0% |
| !! | ATATCAATATTGCTATTGGT+TGG | - | chr6.4:63714633-63714652 | MS.gene064082:CDS | 25.0% |
| !! | CAAATGAAATGACTTGTATT+CGG | - | chr6.4:63715435-63715454 | MS.gene064082:CDS | 25.0% |
| !! | TGGAAAAAAGATCATTTTCA+AGG | - | chr6.4:63716146-63716165 | MS.gene064082:intron | 25.0% |
| !! | TTTGAGAGATTGTTTTCTAA+TGG | + | chr6.4:63713774-63713793 | None:intergenic | 25.0% |
| !!! | AAATTTGGAGTTTTCTGAAA+AGG | + | chr6.4:63716011-63716030 | None:intergenic | 25.0% |
| !!! | ATCATTGATAATGCAAATGT+AGG | - | chr6.4:63716908-63716927 | MS.gene064082:CDS | 25.0% |
| !!! | ATGTTAGTCTTTCTTGTTTT+AGG | - | chr6.4:63716986-63717005 | MS.gene064082:CDS | 25.0% |
| !!! | CTTTTTCAGATTTTTACAAC+TGG | - | chr6.4:63715887-63715906 | MS.gene064082:intron | 25.0% |
| !!! | TTTTGTATGGTATGTTGATT+AGG | - | chr6.4:63714095-63714114 | MS.gene064082:intron | 25.0% |
| AAAGCATGTCAAAATGATGT+TGG | - | chr6.4:63714999-63715018 | MS.gene064082:intron | 30.0% | |
| AAATAACTGATATACTTCCC+AGG | + | chr6.4:63716966-63716985 | None:intergenic | 30.0% | |
| AAATATTGGAAAATGCTTCC+GGG | - | chr6.4:63714529-63714548 | MS.gene064082:CDS | 30.0% | |
| ACATCAATGTTGTGTACAAA+GGG | - | chr6.4:63715412-63715431 | MS.gene064082:CDS | 30.0% | |
| AGATCTAAACTCTGCATATA+TGG | - | chr6.4:63716417-63716436 | MS.gene064082:CDS | 30.0% | |
| AGGATAATTTGAACTGCTTA+GGG | - | chr6.4:63716248-63716267 | MS.gene064082:intron | 30.0% | |
| ATTGAAAGAGCAATGCAATT+TGG | + | chr6.4:63717038-63717057 | None:intergenic | 30.0% | |
| ATTGTTTACAAAGCAGTCAT+GGG | + | chr6.4:63715258-63715277 | None:intergenic | 30.0% | |
| CAACATTGATGTGTAATTTG+GGG | + | chr6.4:63715404-63715423 | None:intergenic | 30.0% | |
| CAACTTATTACTTCCTCTAA+CGG | + | chr6.4:63715311-63715330 | None:intergenic | 30.0% | |
| CACAACATTGATGTGTAATT+TGG | + | chr6.4:63715406-63715425 | None:intergenic | 30.0% | |
| CACAATGCATTAAACAAAGT+TGG | - | chr6.4:63713626-63713645 | MS.gene064082:CDS | 30.0% | |
| CTTTCTACAGAAAATATCTG+CGG | - | chr6.4:63714858-63714877 | MS.gene064082:intron | 30.0% | |
| GAATCAAGGTAATGAAGATA+AGG | - | chr6.4:63713946-63713965 | MS.gene064082:intron | 30.0% | |
| GGATATGTGTAAAAGTTACA+AGG | - | chr6.4:63716201-63716220 | MS.gene064082:CDS | 30.0% | |
| GTTGAATAGGTGTATTATTC+AGG | - | chr6.4:63714171-63714190 | MS.gene064082:CDS | 30.0% | |
| TAAACTTTCTATAACTGGAC+CGG | + | chr6.4:63716494-63716513 | None:intergenic | 30.0% | |
| TACTCTCAAACTCTTCATTA+TGG | + | chr6.4:63715100-63715119 | None:intergenic | 30.0% | |
| TCTTGATTGGATTGTAGAAA+GGG | + | chr6.4:63715924-63715943 | None:intergenic | 30.0% | |
| TTCGTTCTTGTCATCTTTAA+GGG | - | chr6.4:63714324-63714343 | MS.gene064082:CDS | 30.0% | |
| TTCTACAATCCAATCAAGAA+TGG | - | chr6.4:63715925-63715944 | MS.gene064082:intron | 30.0% | |
| TTCTTGATTGGATTGTAGAA+AGG | + | chr6.4:63715925-63715944 | None:intergenic | 30.0% | |
| ! | AAATTATCCTCTCTGACTTT+TGG | + | chr6.4:63716238-63716257 | None:intergenic | 30.0% |
| ! | AAGAACATTGACAGTTTTCA+TGG | + | chr6.4:63716518-63716537 | None:intergenic | 30.0% |
| ! | AATTATCCTCTCTGACTTTT+GGG | + | chr6.4:63716237-63716256 | None:intergenic | 30.0% |
| ! | AGAGATTGTTTTCTAATGGA+AGG | + | chr6.4:63713770-63713789 | None:intergenic | 30.0% |
| ! | ATTGTATTTTTCACATGGCA+TGG | + | chr6.4:63716832-63716851 | None:intergenic | 30.0% |
| ! | ATTTGAAGTAATGTCCGAAA+TGG | - | chr6.4:63715810-63715829 | MS.gene064082:CDS | 30.0% |
| ! | ATTTTTCCTTCCAGAAGATA+CGG | + | chr6.4:63716556-63716575 | None:intergenic | 30.0% |
| ! | GATTTTTACAACTGGCATAA+TGG | - | chr6.4:63715895-63715914 | MS.gene064082:intron | 30.0% |
| ! | GCTTAAGAATCCACATTTTA+TGG | - | chr6.4:63714129-63714148 | MS.gene064082:intron | 30.0% |
| ! | GCTTTTATATGCAATTCAAG+AGG | - | chr6.4:63717073-63717092 | MS.gene064082:CDS | 30.0% |
| ! | TATTGCTATTGGTTGGAATA+AGG | - | chr6.4:63714640-63714659 | MS.gene064082:CDS | 30.0% |
| ! | TCTCAAGAATCTTTAAAAGG+AGG | - | chr6.4:63715977-63715996 | MS.gene064082:intron | 30.0% |
| ! | TGCACATTGTATTTTTCACA+TGG | + | chr6.4:63716837-63716856 | None:intergenic | 30.0% |
| ! | TGCGGTTGTTAAATGTTTTA+GGG | - | chr6.4:63713859-63713878 | MS.gene064082:intron | 30.0% |
| ! | TTAGTACTAGTTTCTGAAGA+TGG | + | chr6.4:63716088-63716107 | None:intergenic | 30.0% |
| ! | TTTTCAATACCATAATCCCA+TGG | - | chr6.4:63716575-63716594 | MS.gene064082:CDS | 30.0% |
| !!! | TCTAATGGAAGGTTTTAGTT+CGG | + | chr6.4:63713759-63713778 | None:intergenic | 30.0% |
| AAACATGATGCATCAGTTAC+AGG | - | chr6.4:63715490-63715509 | MS.gene064082:CDS | 35.0% | |
| AATAGGTGTATTATTCAGGC+TGG | - | chr6.4:63714175-63714194 | MS.gene064082:CDS | 35.0% | |
| AATATATACCACATACCGTG+TGG | + | chr6.4:63715847-63715866 | None:intergenic | 35.0% | |
| AATGTACTCCATAAAGATGC+AGG | - | chr6.4:63715340-63715359 | MS.gene064082:CDS | 35.0% | |
| ACAATCCAATCAAGAATGGT+AGG | - | chr6.4:63715929-63715948 | MS.gene064082:intron | 35.0% | |
| AGGTTGTATTGAAATGTTCG+CGG | - | chr6.4:63713904-63713923 | MS.gene064082:intron | 35.0% | |
| ATACCATACAAAACCGAAAC+AGG | + | chr6.4:63714088-63714107 | None:intergenic | 35.0% | |
| ATATGAAATCAACTACGGGA+AGG | - | chr6.4:63714958-63714977 | MS.gene064082:intron | 35.0% | |
| ATTATAGGTGAAACCAGTGA+GGG | - | chr6.4:63714486-63714505 | MS.gene064082:CDS | 35.0% | |
| CACATCAATGTTGTGTACAA+AGG | - | chr6.4:63715411-63715430 | MS.gene064082:CDS | 35.0% | |
| CAGAAAACTCCAAATTTGTG+AGG | - | chr6.4:63716014-63716033 | MS.gene064082:intron | 35.0% | |
| CATGACTGCTTTGTAAACAA+TGG | - | chr6.4:63715257-63715276 | MS.gene064082:CDS | 35.0% | |
| CATTGTTTACAAAGCAGTCA+TGG | + | chr6.4:63715259-63715278 | None:intergenic | 35.0% | |
| CTTCGTTCTTGTCATCTTTA+AGG | - | chr6.4:63714323-63714342 | MS.gene064082:CDS | 35.0% | |
| GAAACTAGTACTAAGCAATC+AGG | - | chr6.4:63716094-63716113 | MS.gene064082:intron | 35.0% | |
| GAGGATAATTTGAACTGCTT+AGG | - | chr6.4:63716247-63716266 | MS.gene064082:intron | 35.0% | |
| GATATACTTCCCAGGTTATT+CGG | + | chr6.4:63716958-63716977 | None:intergenic | 35.0% | |
| GGATAATTTGAACTGCTTAG+GGG | - | chr6.4:63716249-63716268 | MS.gene064082:intron | 35.0% | |
| GGTGAAAAGTAGTGAAAGTT+TGG | - | chr6.4:63716126-63716145 | MS.gene064082:intron | 35.0% | |
| GTTGAGCTTCTGAATAAAAC+CGG | - | chr6.4:63716472-63716491 | MS.gene064082:CDS | 35.0% | |
| TAGAGAGGGTTTGAAAGATA+CGG | - | chr6.4:63714243-63714262 | MS.gene064082:CDS | 35.0% | |
| TCAAGACTCATTGTTTGTAG+CGG | + | chr6.4:63715137-63715156 | None:intergenic | 35.0% | |
| TGGTGTAACAAGAACCATTT+CGG | + | chr6.4:63715827-63715846 | None:intergenic | 35.0% | |
| ! | ACATTTTTGTTGCATCTTCG+TGG | - | chr6.4:63716704-63716723 | MS.gene064082:CDS | 35.0% |
| ! | ACTGTCGAATCAGAACTTTT+AGG | + | chr6.4:63715368-63715387 | None:intergenic | 35.0% |
| ! | AGGATGTGGGTTATGAATAT+GGG | - | chr6.4:63715171-63715190 | MS.gene064082:intron | 35.0% |
| ! | ATTATCCTCTCTGACTTTTG+GGG | + | chr6.4:63716236-63716255 | None:intergenic | 35.0% |
| ! | CATGCTTTTCTTACAGACAA+AGG | + | chr6.4:63714987-63715006 | None:intergenic | 35.0% |
| ! | CATGTAGTGGAAAGTAAACA+AGG | + | chr6.4:63715627-63715646 | None:intergenic | 35.0% |
| ! | CTGCGGTTGTTAAATGTTTT+AGG | - | chr6.4:63713858-63713877 | MS.gene064082:intron | 35.0% |
| ! | TATATGGAAGCTTTGTGTTC+CGG | - | chr6.4:63716433-63716452 | MS.gene064082:CDS | 35.0% |
| ! | TTTAGGATCCTGCATCTTTA+TGG | + | chr6.4:63715351-63715370 | None:intergenic | 35.0% |
| !! | ATTACTACTCAGCTTGTTGT+TGG | + | chr6.4:63713585-63713604 | None:intergenic | 35.0% |
| !! | CAACAATTTTGGTGAGATGT+GGG | + | chr6.4:63713838-63713857 | None:intergenic | 35.0% |
| !! | GAGAATTGTTTCGAGTTCTT+TGG | + | chr6.4:63713678-63713697 | None:intergenic | 35.0% |
| !! | GCTTTGAAATTAGCGAATCA+AGG | - | chr6.4:63713932-63713951 | MS.gene064082:intron | 35.0% |
| !! | TAAGCAATCAGGCTTGTTTT+CGG | - | chr6.4:63716105-63716124 | MS.gene064082:intron | 35.0% |
| AAAAGAGGGAGAAAGAGCAA+AGG | + | chr6.4:63714604-63714623 | None:intergenic | 40.0% | |
| AACATCTCTATGTCTGGACT+CGG | + | chr6.4:63714922-63714941 | None:intergenic | 40.0% | |
| AACGAGAATAAGTTCGTCAC+CGG | + | chr6.4:63716455-63716474 | None:intergenic | 40.0% | |
| ACAAGGTGATTTCTCACTCT+CGG | - | chr6.4:63714383-63714402 | MS.gene064082:CDS | 40.0% | |
| AGGGTTTGAAAGATACGGAT+TGG | - | chr6.4:63714248-63714267 | MS.gene064082:CDS | 40.0% | |
| AGTCCAGACATAGAGATGTT+AGG | - | chr6.4:63714922-63714941 | MS.gene064082:intron | 40.0% | |
| ATGGTTCTTGTTACACCACA+CGG | - | chr6.4:63715829-63715848 | MS.gene064082:CDS | 40.0% | |
| CCAGATTCTTCTGTTAGAGA+AGG | - | chr6.4:63713884-63713903 | MS.gene064082:intron | 40.0% | |
| CCTTCTCTAACAGAAGAATC+TGG | + | chr6.4:63713887-63713906 | None:intergenic | 40.0% | |
| CTATTCAACTCAATCAACGC+AGG | + | chr6.4:63714160-63714179 | None:intergenic | 40.0% | |
| CTGGTATTGTACAAAACACG+CGG | - | chr6.4:63714056-63714075 | MS.gene064082:intron | 40.0% | |
| GAGCAAAGGTAAACCTTTGA+AGG | + | chr6.4:63714590-63714609 | None:intergenic | 40.0% | |
| GATTATAGGTGAAACCAGTG+AGG | - | chr6.4:63714485-63714504 | MS.gene064082:CDS | 40.0% | |
| GGATTGGAAAACACGTAAAG+CGG | - | chr6.4:63714264-63714283 | MS.gene064082:CDS | 40.0% | |
| GTCATCCCAAAAGAGATGAT+TGG | - | chr6.4:63715030-63715049 | MS.gene064082:intron | 40.0% | |
| GTGAATCGTCTTGTATGTGA+AGG | - | chr6.4:63716394-63716413 | MS.gene064082:CDS | 40.0% | |
| TAATTTGAACTGCTTAGGGG+AGG | - | chr6.4:63716252-63716271 | MS.gene064082:intron | 40.0% | |
| TCCACTACAGAATGTGTTCT+GGG | + | chr6.4:63715074-63715093 | None:intergenic | 40.0% | |
| TCTACAGAAAATATCTGCGG+AGG | - | chr6.4:63714861-63714880 | MS.gene064082:intron | 40.0% | |
| TCTCACCAAAATTGTTGCTG+CGG | - | chr6.4:63713841-63713860 | MS.gene064082:intron | 40.0% | |
| TCTGCTCAAGTGAGAAAGAA+TGG | - | chr6.4:63716292-63716311 | MS.gene064082:intron | 40.0% | |
| TCTTCGTGGCATACCTTAAA+TGG | - | chr6.4:63716718-63716737 | MS.gene064082:CDS | 40.0% | |
| TCTTGATGTTACAAGCATGC+AGG | - | chr6.4:63715151-63715170 | MS.gene064082:intron | 40.0% | |
| TGGAATGTGGAGTTAATGAG+TGG | + | chr6.4:63713700-63713719 | None:intergenic | 40.0% | |
| TGTAATTTGGGGACTTGACT+CGG | + | chr6.4:63715393-63715412 | None:intergenic | 40.0% | |
| TTCATTCTCTTGATTCCTCG+AGG | - | chr6.4:63714356-63714375 | MS.gene064082:CDS | 40.0% | |
| TTCCACTACAGAATGTGTTC+TGG | + | chr6.4:63715075-63715094 | None:intergenic | 40.0% | |
| TTTAATAACCCAGGCCTGTT+TGG | + | chr6.4:63716878-63716897 | None:intergenic | 40.0% | |
| ! | AACAACCGCAGCAACAATTT+TGG | + | chr6.4:63713849-63713868 | None:intergenic | 40.0% |
| ! | AACGGTTTGCTTCTCACATT+TGG | + | chr6.4:63715293-63715312 | None:intergenic | 40.0% |
| ! | AACGTGCCAATCATCTCTTT+TGG | + | chr6.4:63715039-63715058 | None:intergenic | 40.0% |
| ! | ACGTGCCAATCATCTCTTTT+GGG | + | chr6.4:63715038-63715057 | None:intergenic | 40.0% |
| ! | CAAAGGTAAACCTTTGAAGG+AGG | + | chr6.4:63714587-63714606 | None:intergenic | 40.0% |
| ! | CAGGATGTGGGTTATGAATA+TGG | - | chr6.4:63715170-63715189 | MS.gene064082:intron | 40.0% |
| ! | CAGTAGTTTGTGTTACTCTC+GGG | + | chr6.4:63716367-63716386 | None:intergenic | 40.0% |
| ! | CCAGTAGTTTGTGTTACTCT+CGG | + | chr6.4:63716368-63716387 | None:intergenic | 40.0% |
| ! | CCTATTTTCGATGCTCTTGT+TGG | - | chr6.4:63713989-63714008 | MS.gene064082:intron | 40.0% |
| ! | CTAGTTTCTGAAGATGGCTT+TGG | + | chr6.4:63716082-63716101 | None:intergenic | 40.0% |
| ! | CTTGAAGCGTTATCATGTAG+TGG | + | chr6.4:63715640-63715659 | None:intergenic | 40.0% |
| ! | TTGCTTCTCACATTTGGCTT+CGG | + | chr6.4:63715287-63715306 | None:intergenic | 40.0% |
| ! | TTTTCAGCCATGCAGAAAAG+AGG | - | chr6.4:63717111-63717130 | MS.gene064082:CDS | 40.0% |
| !! | ACCATTTCTAGCATTGGTTC+TGG | + | chr6.4:63716338-63716357 | None:intergenic | 40.0% |
| !! | AGGACAACCATTTCTAGCAT+TGG | + | chr6.4:63716344-63716363 | None:intergenic | 40.0% |
| !! | ATCGCTTTTACCGAATAACC+TGG | - | chr6.4:63716945-63716964 | MS.gene064082:CDS | 40.0% |
| !! | CCAACAAGAGCATCGAAAAT+AGG | + | chr6.4:63713992-63714011 | None:intergenic | 40.0% |
| !! | CTGCGTTGATTGAGTTGAAT+AGG | - | chr6.4:63714158-63714177 | MS.gene064082:CDS | 40.0% |
| !! | GCAACAATTTTGGTGAGATG+TGG | + | chr6.4:63713839-63713858 | None:intergenic | 40.0% |
| !! | GCTGTTGGTAGTATTAGAGA+GGG | - | chr6.4:63714229-63714248 | MS.gene064082:CDS | 40.0% |
| !! | TCGCTTTTACCGAATAACCT+GGG | - | chr6.4:63716946-63716965 | MS.gene064082:CDS | 40.0% |
| AAGGAGGATCCAGTTTCTGA+AGG | + | chr6.4:63714571-63714590 | None:intergenic | 45.0% | |
| AATCACCTTGTCAAACCTCG+AGG | + | chr6.4:63714374-63714393 | None:intergenic | 45.0% | |
| AATGCAATTTGGTCCGTGGA+CGG | + | chr6.4:63717027-63717046 | None:intergenic | 45.0% | |
| ACTCATTGTTTGTAGCGGCT+TGG | + | chr6.4:63715132-63715151 | None:intergenic | 45.0% | |
| AGGAATGAGGAGATGGAATG+TGG | + | chr6.4:63713713-63713732 | None:intergenic | 45.0% | |
| AGGTGTATTATTCAGGCTGG+TGG | - | chr6.4:63714178-63714197 | MS.gene064082:CDS | 45.0% | |
| CACTTTAGCACCGTATCTTC+TGG | - | chr6.4:63716543-63716562 | MS.gene064082:CDS | 45.0% | |
| CCAAGCCTACCATTCTTGAT+TGG | + | chr6.4:63715937-63715956 | None:intergenic | 45.0% | |
| CCAATCAAGAATGGTAGGCT+TGG | - | chr6.4:63715934-63715953 | MS.gene064082:intron | 45.0% | |
| CCACTACAGAATGTGTTCTG+GGG | + | chr6.4:63715073-63715092 | None:intergenic | 45.0% | |
| CCATACAAAACCGAAACAGG+AGG | + | chr6.4:63714085-63714104 | None:intergenic | 45.0% | |
| CCGAGAGTAACACAAACTAC+TGG | - | chr6.4:63716365-63716384 | MS.gene064082:CDS | 45.0% | |
| CTATCTCCAGCATGAATCCT+CGG | + | chr6.4:63716178-63716197 | None:intergenic | 45.0% | |
| GAAACTGGATCCTCCTTCAA+AGG | - | chr6.4:63714574-63714593 | MS.gene064082:CDS | 45.0% | |
| GAATGTCGAGAATGCAAGAG+AGG | + | chr6.4:63713733-63713752 | None:intergenic | 45.0% | |
| GAGAATGCAAGAGAGGAATG+AGG | + | chr6.4:63713726-63713745 | None:intergenic | 45.0% | |
| GAGCCTAACATCTCTATGTC+TGG | + | chr6.4:63714928-63714947 | None:intergenic | 45.0% | |
| GATCGAGACACACACGATAT+CGG | - | chr6.4:63713650-63713669 | MS.gene064082:CDS | 45.0% | |
| GATTCATGCTGGAGATAGTG+TGG | - | chr6.4:63716180-63716199 | MS.gene064082:CDS | 45.0% | |
| GCAGGTTTCGCCATAAAATG+TGG | + | chr6.4:63714142-63714161 | None:intergenic | 45.0% | |
| GCCAGAACCAATGCTAGAAA+TGG | - | chr6.4:63716334-63716353 | MS.gene064082:intron | 45.0% | |
| GGGTTATGAATATGGGCCTA+TGG | - | chr6.4:63715178-63715197 | MS.gene064082:intron | 45.0% | |
| GTTACAAGCATGCAGGATGT+GGG | - | chr6.4:63715158-63715177 | MS.gene064082:intron | 45.0% | |
| TGATTCCTCGAGGTTTGACA+AGG | - | chr6.4:63714366-63714385 | MS.gene064082:CDS | 45.0% | |
| TGCGTTGGGACAAATTGCTT+TGG | - | chr6.4:63714294-63714313 | MS.gene064082:CDS | 45.0% | |
| TGTGAGAAGCAAACCGTTAG+AGG | - | chr6.4:63715295-63715314 | MS.gene064082:CDS | 45.0% | |
| TGTTACAAGCATGCAGGATG+TGG | - | chr6.4:63715157-63715176 | MS.gene064082:intron | 45.0% | |
| TTAGCACCGTATCTTCTGGA+AGG | - | chr6.4:63716547-63716566 | MS.gene064082:CDS | 45.0% | |
| TTGTTACACCACACGGTATG+TGG | - | chr6.4:63715836-63715855 | MS.gene064082:CDS | 45.0% | |
| ! | AGTGTTCTTTTGACGGCTGT+TGG | - | chr6.4:63714214-63714233 | MS.gene064082:CDS | 45.0% |
| ! | TAGTTTGTGTTACTCTCGGG+AGG | + | chr6.4:63716364-63716383 | None:intergenic | 45.0% |
| !! | AGATGGCTTTGGAGTGCATA+CGG | + | chr6.4:63716071-63716090 | None:intergenic | 45.0% |
| !! | CCTCCTGTTTCGGTTTTGTA+TGG | - | chr6.4:63714082-63714101 | MS.gene064082:intron | 45.0% |
| !! | GACGCAGAGTGTTCTTTTGA+CGG | - | chr6.4:63714207-63714226 | MS.gene064082:CDS | 45.0% |
| !! | GGCTGTTGGTAGTATTAGAG+AGG | - | chr6.4:63714228-63714247 | MS.gene064082:CDS | 45.0% |
| !! | TTGGCTCTGCCTCACAAATT+TGG | + | chr6.4:63716026-63716045 | None:intergenic | 45.0% |
| AAAGCGGCTTCTGTTGCGTT+GGG | - | chr6.4:63714280-63714299 | MS.gene064082:CDS | 50.0% | |
| ACTACCGAGCCTTCAGAAAC+TGG | - | chr6.4:63714559-63714578 | MS.gene064082:CDS | 50.0% | |
| ATCTCTATGTCTGGACTCGG+TGG | + | chr6.4:63714919-63714938 | None:intergenic | 50.0% | |
| CACTCCTGCTTGTCATCCAT+AGG | + | chr6.4:63715197-63715216 | None:intergenic | 50.0% | |
| CCCCAGAACACATTCTGTAG+TGG | - | chr6.4:63715070-63715089 | MS.gene064082:intron | 50.0% | |
| CTTAACCAGTGCAGCCAAAC+AGG | - | chr6.4:63716861-63716880 | MS.gene064082:CDS | 50.0% | |
| GAGCAATGCAATTTGGTCCG+TGG | + | chr6.4:63717031-63717050 | None:intergenic | 50.0% | |
| GCAAGAGAGGAATGAGGAGA+TGG | + | chr6.4:63713720-63713739 | None:intergenic | 50.0% | |
| TAAAGCGGCTTCTGTTGCGT+TGG | - | chr6.4:63714279-63714298 | MS.gene064082:CDS | 50.0% | |
| TGTAAAACCGCATCCCTCAC+TGG | + | chr6.4:63714502-63714521 | None:intergenic | 50.0% | |
| ! | GCTTCAGCGTTTTGTCTTGC+TGG | - | chr6.4:63714037-63714056 | MS.gene064082:intron | 50.0% |
| ! | GGATCCAGTTTCTGAAGGCT+CGG | + | chr6.4:63714566-63714585 | None:intergenic | 50.0% |
| ! | GGCTCGGTAGTATAATGACC+CGG | + | chr6.4:63714550-63714569 | None:intergenic | 50.0% |
| ! | GTTGAAATGAGCACCGTCCA+CGG | - | chr6.4:63717011-63717030 | MS.gene064082:CDS | 50.0% |
| ! | TCCTGGGAGAAGCGACATTT+TGG | + | chr6.4:63716045-63716064 | None:intergenic | 50.0% |
| !! | CATTTTCAAGGAGCCAACCG+AGG | - | chr6.4:63716158-63716177 | MS.gene064082:CDS | 50.0% |
| AACTTGCCTGCTGCAGCCAT+GGG | + | chr6.4:63716594-63716613 | None:intergenic | 55.0% | |
| AGCCAACCGAGGATTCATGC+TGG | - | chr6.4:63716169-63716188 | MS.gene064082:CDS | 55.0% | |
| CACGCGGAATCCTCCTGTTT+CGG | - | chr6.4:63714072-63714091 | MS.gene064082:intron | 55.0% | |
| CATAATCCCATGGCTGCAGC+AGG | - | chr6.4:63716585-63716604 | MS.gene064082:CDS | 55.0% | |
| CTCCAGCATGAATCCTCGGT+TGG | + | chr6.4:63716174-63716193 | None:intergenic | 55.0% | |
| CTGCTGCAGCCATGGGATTA+TGG | + | chr6.4:63716587-63716606 | None:intergenic | 55.0% | |
| GACTGCCCCAAAAGTCAGAG+AGG | - | chr6.4:63716228-63716247 | MS.gene064082:CDS | 55.0% | |
| GGAGTGCATACGGAGATCCT+GGG | + | chr6.4:63716061-63716080 | None:intergenic | 55.0% | |
| GGTGAAACCAGTGAGGGATG+CGG | - | chr6.4:63714492-63714511 | MS.gene064082:CDS | 55.0% | |
| TATCTGCGGAGGTGACTCTG+TGG | - | chr6.4:63714872-63714891 | MS.gene064082:intron | 55.0% | |
| TGGAGTGCATACGGAGATCC+TGG | + | chr6.4:63716062-63716081 | None:intergenic | 55.0% | |
| TGGGCCTATGGATGACAAGC+AGG | - | chr6.4:63715190-63715209 | MS.gene064082:intron | 55.0% | |
| ! | CTGCACGCCTCTTTTCTGCA+TGG | + | chr6.4:63717121-63717140 | None:intergenic | 55.0% |
| ! | GCCAAAATGTCGCTTCTCCC+AGG | - | chr6.4:63716041-63716060 | MS.gene064082:intron | 55.0% |
| !! | AGCATTGGTTCTGGCAGCAG+AGG | + | chr6.4:63716329-63716348 | None:intergenic | 55.0% |
| CAGTGCAGCCAAACAGGCCT+GGG | - | chr6.4:63716867-63716886 | MS.gene064082:CDS | 60.0% | |
| GAACTTGCCTGCTGCAGCCA+TGG | + | chr6.4:63716595-63716614 | None:intergenic | 60.0% | |
| CCAGGCCTGTTTGGCTGCAC+TGG | + | chr6.4:63716869-63716888 | None:intergenic | 65.0% | |
| CCAGTGCAGCCAAACAGGCC+TGG | - | chr6.4:63716866-63716885 | MS.gene064082:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 63713575 | 63717173 | 63713575 | ID=MS.gene064082 |
| chr6.4 | mRNA | 63713575 | 63717173 | 63713575 | ID=MS.gene064082.t1;Parent=MS.gene064082 |
| chr6.4 | exon | 63716361 | 63717173 | 63716361 | ID=MS.gene064082.t1.exon1;Parent=MS.gene064082.t1 |
| chr6.4 | CDS | 63716361 | 63717173 | 63716361 | ID=cds.MS.gene064082.t1;Parent=MS.gene064082.t1 |
| chr6.4 | exon | 63716153 | 63716255 | 63716153 | ID=MS.gene064082.t1.exon2;Parent=MS.gene064082.t1 |
| chr6.4 | CDS | 63716153 | 63716255 | 63716153 | ID=cds.MS.gene064082.t1;Parent=MS.gene064082.t1 |
| chr6.4 | exon | 63715237 | 63715880 | 63715237 | ID=MS.gene064082.t1.exon3;Parent=MS.gene064082.t1 |
| chr6.4 | CDS | 63715237 | 63715880 | 63715237 | ID=cds.MS.gene064082.t1;Parent=MS.gene064082.t1 |
| chr6.4 | exon | 63714142 | 63714852 | 63714142 | ID=MS.gene064082.t1.exon4;Parent=MS.gene064082.t1 |
| chr6.4 | CDS | 63714142 | 63714852 | 63714142 | ID=cds.MS.gene064082.t1;Parent=MS.gene064082.t1 |
| chr6.4 | exon | 63713575 | 63713740 | 63713575 | ID=MS.gene064082.t1.exon5;Parent=MS.gene064082.t1 |
| chr6.4 | CDS | 63713575 | 63713740 | 63713575 | ID=cds.MS.gene064082.t1;Parent=MS.gene064082.t1 |
| Gene Sequence |
| Protein sequence |
