Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065068.t1 | XP_003597689.1 | 91.7 | 508 | 42 | 0 | 1 | 508 | 24 | 531 | 3.80E-254 | 887.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065068.t1 | Q93Y22 | 76.3 | 510 | 113 | 5 | 1 | 508 | 24 | 527 | 1.5e-201 | 703.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065068.t1 | G7II11 | 91.7 | 508 | 42 | 0 | 1 | 508 | 24 | 531 | 2.8e-254 | 887.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene003764 | MS.gene065068 | PPI |
| MS.gene065068 | MS.gene74608 | PPI |
| MS.gene065068 | MS.gene062888 | PPI |
| MS.gene003673 | MS.gene065068 | PPI |
| MS.gene21432 | MS.gene065068 | PPI |
| MS.gene065068 | MS.gene02789 | PPI |
| MS.gene065068 | MS.gene02023 | PPI |
| MS.gene065068 | MS.gene23325 | PPI |
| MS.gene065068 | MS.gene50735 | PPI |
| MS.gene014282 | MS.gene065068 | PPI |
| MS.gene053143 | MS.gene065068 | PPI |
| MS.gene065068 | MS.gene50077 | PPI |
| MS.gene065068 | MS.gene054585 | PPI |
| MS.gene065068 | MS.gene68093 | PPI |
| MS.gene034150 | MS.gene065068 | PPI |
| MS.gene065068 | MS.gene005784 | PPI |
| MS.gene065068 | MS.gene056700 | PPI |
| MS.gene065068 | MS.gene032230 | PPI |
| MS.gene065068 | MS.gene003672 | PPI |
| MS.gene063166 | MS.gene065068 | PPI |
| MS.gene065068 | MS.gene45686 | PPI |
| MS.gene065068 | MS.gene38302 | PPI |
| MS.gene065068 | MS.gene68223 | PPI |
| MS.gene065068 | MS.gene064893 | PPI |
| MS.gene065068 | MS.gene003223 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065068.t1 | MTR_2g101180 | 94.488 | 508 | 28 | 0 | 1 | 508 | 24 | 531 | 0.0 | 979 |
| MS.gene065068.t1 | MTR_1g111910 | 92.172 | 396 | 29 | 2 | 113 | 508 | 1 | 394 | 0.0 | 712 |
| MS.gene065068.t1 | MTR_1g111900 | 86.298 | 416 | 16 | 3 | 93 | 508 | 24 | 398 | 0.0 | 696 |
| MS.gene065068.t1 | MTR_1g111910 | 92.515 | 334 | 24 | 1 | 113 | 446 | 1 | 333 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065068.t1 | AT5G05010 | 74.314 | 510 | 123 | 5 | 1 | 508 | 24 | 527 | 0.0 | 755 |
| MS.gene065068.t1 | AT5G05010 | 74.314 | 510 | 123 | 5 | 1 | 508 | 24 | 527 | 0.0 | 755 |
Find 131 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTCTTGGTTAAGAATT+TGG | 0.109257 | 1.2:+82846832 | None:intergenic |
| CTGTGTTCTCTGAGCATATT+TGG | 0.189831 | 1.2:+82844084 | None:intergenic |
| CTTGAATATGTCCATCTTCT+TGG | 0.211819 | 1.2:+82846820 | None:intergenic |
| TCTAGCAGTGGAACTGGTTT+TGG | 0.235664 | 1.2:-82847355 | MS.gene065068:CDS |
| TTTGGAAGTGGCTCTGGTTT+TGG | 0.245009 | 1.2:-82847337 | MS.gene065068:CDS |
| AACTGTTGGCCCTCTTCTTC+TGG | 0.278840 | 1.2:-82845270 | MS.gene065068:CDS |
| AATAACTCTTTATTCATGTT+AGG | 0.288485 | 1.2:+82845514 | None:intergenic |
| TCAAGGGAATAAGAATATTC+AGG | 0.290822 | 1.2:+82847788 | None:intergenic |
| GTCCTAGACTGGCCAAGTTT+TGG | 0.298368 | 1.2:+82846969 | None:intergenic |
| TACAAACATCATACCACTTA+AGG | 0.306927 | 1.2:-82844119 | MS.gene065068:CDS |
| TTTCAGAAAGAATACAAGTT+TGG | 0.329519 | 1.2:+82848205 | None:intergenic |
| GAGCAACATACTGGAAGATT+TGG | 0.339702 | 1.2:-82848246 | MS.gene065068:CDS |
| GAAAAGAATAGAGGTGATAA+AGG | 0.356831 | 1.2:-82847445 | MS.gene065068:CDS |
| CCAGATCCCATTGACGTTAA+CGG | 0.360280 | 1.2:+82847412 | None:intergenic |
| TGCCGTAAAACGAACTGAAA+TGG | 0.366753 | 1.2:+82844469 | None:intergenic |
| AGATGGACATATTCAAGTTC+AGG | 0.371232 | 1.2:-82846814 | MS.gene065068:intron |
| GCAGCATTTCCCAAGTTGAT+AGG | 0.371518 | 1.2:-82848365 | MS.gene065068:CDS |
| TTTGATGAAGTCATCTCTCT+TGG | 0.376116 | 1.2:-82847722 | MS.gene065068:CDS |
| CTTTGGTCCGTTAACGTCAA+TGG | 0.381100 | 1.2:-82847419 | MS.gene065068:CDS |
| TGGCTTGATTATCACCAGTT+TGG | 0.383291 | 1.2:+82845554 | None:intergenic |
| TTATGTCAGCATTGAATATG+AGG | 0.408842 | 1.2:-82845238 | MS.gene065068:CDS |
| ACCTTTAGGCTTGGTAGAAA+AGG | 0.412806 | 1.2:+82847291 | None:intergenic |
| ATAACTCTTTATTCATGTTA+GGG | 0.412906 | 1.2:+82845515 | None:intergenic |
| ACCAACACCGGCGGCATCAC+TGG | 0.413982 | 1.2:+82845432 | None:intergenic |
| TGTGTTCTCTGAGCATATTT+GGG | 0.417674 | 1.2:+82844085 | None:intergenic |
| TCTGAGGAATGTTGTGGTTT+CGG | 0.419247 | 1.2:-82845199 | MS.gene065068:CDS |
| GCCAGTGATGCCGCCGGTGT+TGG | 0.419520 | 1.2:-82845433 | MS.gene065068:CDS |
| TAAGAATTTGGAGAGACAAT+TGG | 0.421054 | 1.2:+82846844 | None:intergenic |
| AGAGGTGATAAAGGAGGCTT+TGG | 0.422652 | 1.2:-82847436 | MS.gene065068:CDS |
| ATCTGCCACTGCTCCGCCAA+AGG | 0.428873 | 1.2:-82847084 | MS.gene065068:CDS |
| GTGGGGCAGCTGTCCTAGAC+TGG | 0.429267 | 1.2:+82846958 | None:intergenic |
| CCATCTGTTAGTCAGATTGA+TGG | 0.431274 | 1.2:-82845150 | MS.gene065068:CDS |
| TTTCCCAGTGCCTATCAACT+TGG | 0.434831 | 1.2:+82848355 | None:intergenic |
| AAACAAACAGAGCAACATAC+TGG | 0.436197 | 1.2:-82848255 | MS.gene065068:CDS |
| GACTAACAGATGGTGCTTCT+CGG | 0.439604 | 1.2:+82845160 | None:intergenic |
| CCAGTGGGGAAAGGCCTGTT+GGG | 0.443467 | 1.2:+82845460 | None:intergenic |
| CCGTTAACGTCAATGGGATC+TGG | 0.444335 | 1.2:-82847412 | MS.gene065068:CDS |
| ACTGCTCCGCCAAAGGGTCT+TGG | 0.445125 | 1.2:-82847077 | MS.gene065068:CDS |
| GAAGTTGTTCAGCCAAAACT+TGG | 0.446093 | 1.2:-82846981 | MS.gene065068:CDS |
| AGCATATCTAGCAGTGGAAC+TGG | 0.447231 | 1.2:-82847361 | MS.gene065068:CDS |
| CGAATATATACTAGGTCTAA+AGG | 0.450556 | 1.2:-82845485 | MS.gene065068:CDS |
| TTTCCCAAGTTGATAGGCAC+TGG | 0.451489 | 1.2:-82848359 | MS.gene065068:CDS |
| GCCGTAAAACGAACTGAAAT+GGG | 0.454944 | 1.2:+82844470 | None:intergenic |
| AGCTTCATACCAAGACCCTT+TGG | 0.456960 | 1.2:+82847068 | None:intergenic |
| TTTGGTCCGTTAACGTCAAT+GGG | 0.461560 | 1.2:-82847418 | MS.gene065068:CDS |
| GGGAAAGAATGCTGATGAAT+CGG | 0.468736 | 1.2:+82844490 | None:intergenic |
| TCTGCCACTGCTCCGCCAAA+GGG | 0.470096 | 1.2:-82847083 | MS.gene065068:CDS |
| TTGATGAAGTCATCTCTCTT+GGG | 0.471175 | 1.2:-82847721 | MS.gene065068:CDS |
| GTTCAGATTGAAAAGAATAG+AGG | 0.475721 | 1.2:-82847454 | MS.gene065068:intron |
| GATGGTGCTTCTCGGAGAGC+TGG | 0.477636 | 1.2:+82845168 | None:intergenic |
| CAAATTCTTAACCAAGAAGA+TGG | 0.481738 | 1.2:-82846831 | MS.gene065068:CDS |
| GTTTGTTTGTTACAAGAAGC+AGG | 0.489618 | 1.2:+82848270 | None:intergenic |
| TCCTCAACAGTTAAAGTGAC+CGG | 0.492542 | 1.2:+82846924 | None:intergenic |
| TAGACCTAGTATATATTCGT+TGG | 0.492607 | 1.2:+82845489 | None:intergenic |
| TGACTCTAGGAATTCCATCT+TGG | 0.501538 | 1.2:-82844786 | MS.gene065068:CDS |
| TTAGTCAGATTGATGGAGAA+TGG | 0.504506 | 1.2:-82845143 | MS.gene065068:CDS |
| CAAGGGAATAAGAATATTCA+GGG | 0.504878 | 1.2:+82847789 | None:intergenic |
| ACAAACATCATACCACTTAA+GGG | 0.509720 | 1.2:-82844118 | MS.gene065068:CDS |
| CCCAACAGGCCTTTCCCCAC+TGG | 0.515516 | 1.2:-82845460 | MS.gene065068:CDS |
| TTTCTAATGCAGTCAACTGT+TGG | 0.516277 | 1.2:-82845284 | MS.gene065068:intron |
| TGCAGATACCCTCTTCGTCA+AGG | 0.516625 | 1.2:+82847771 | None:intergenic |
| TGCCCCACCACTTACAGATC+CGG | 0.517039 | 1.2:-82846943 | MS.gene065068:CDS |
| GGCATCACTGGCTTGACCAG+TGG | 0.517182 | 1.2:+82845444 | None:intergenic |
| GCAGAGCACCGATGAGTCAA+TGG | 0.518908 | 1.2:-82845392 | MS.gene065068:CDS |
| CGAAGAAAAGCTTTACAAGC+TGG | 0.519651 | 1.2:-82847642 | MS.gene065068:CDS |
| TCCGGTCACTTTAACTGTTG+AGG | 0.521260 | 1.2:-82846925 | MS.gene065068:CDS |
| GAGCAAGGTCAATGAAACTA+AGG | 0.523675 | 1.2:-82847612 | MS.gene065068:CDS |
| TTGGAATCGTTGAAAGCAGA+AGG | 0.527051 | 1.2:-82847017 | MS.gene065068:CDS |
| TAGGTCTAAAGGATCCCAAC+AGG | 0.527324 | 1.2:-82845474 | MS.gene065068:CDS |
| ACCAGTGGGGAAAGGCCTGT+TGG | 0.527981 | 1.2:+82845459 | None:intergenic |
| AGTCATCTCTCTTGGGCACA+AGG | 0.529363 | 1.2:-82847714 | MS.gene065068:CDS |
| AAACTAAGGATCTTATGAAA+CGG | 0.532429 | 1.2:-82847598 | MS.gene065068:CDS |
| TTCCCAGTGCCTATCAACTT+GGG | 0.533942 | 1.2:+82848356 | None:intergenic |
| CAGCGGCACCATTGACTCAT+CGG | 0.534057 | 1.2:+82845384 | None:intergenic |
| GGCTTTGCAGGTATGACTCT+AGG | 0.534133 | 1.2:-82844799 | MS.gene065068:intron |
| TATATTTGGCAGTGGGTCGA+TGG | 0.534191 | 1.2:-82844531 | MS.gene065068:intron |
| GCATCACTGGCTTGACCAGT+GGG | 0.537469 | 1.2:+82845445 | None:intergenic |
| GGAGGATTACCACCCTTAAG+TGG | 0.539563 | 1.2:+82844106 | None:intergenic |
| GACAGTTTGTGGATATGTCT+CGG | 0.541129 | 1.2:-82848409 | None:intergenic |
| ATGTCTCGGATAAGAATTGA+GGG | 0.545450 | 1.2:-82848395 | MS.gene065068:CDS |
| GAAAAGGAATCAACATCAGT+GGG | 0.547040 | 1.2:+82847307 | None:intergenic |
| TGACAACCAACCTTTAGGCT+TGG | 0.549250 | 1.2:+82847282 | None:intergenic |
| AAGGGTCTTGGTATGAAGCT+TGG | 0.552053 | 1.2:-82847065 | MS.gene065068:CDS |
| TGATTGATAATTCAAATCGC+AGG | 0.552733 | 1.2:-82844748 | MS.gene065068:intron |
| AGAAAAGGAATCAACATCAG+TGG | 0.553193 | 1.2:+82847306 | None:intergenic |
| CTGGCTTGACCAGTGGGGAA+AGG | 0.553289 | 1.2:+82845451 | None:intergenic |
| TTCATACCAAGACCCTTTGG+CGG | 0.558674 | 1.2:+82847071 | None:intergenic |
| CTTCATCAATGTTTGATCTG+AGG | 0.560280 | 1.2:-82845215 | MS.gene065068:CDS |
| GTTCTCTGAGCATATTTGGG+AGG | 0.564000 | 1.2:+82844088 | None:intergenic |
| TGACCGGATCTGTAAGTGGT+GGG | 0.568365 | 1.2:+82846940 | None:intergenic |
| GCAGATACCCTCTTCGTCAA+GGG | 0.569720 | 1.2:+82847772 | None:intergenic |
| AGCAGGTACAGAGCTTCTAT+CGG | 0.569923 | 1.2:+82848287 | None:intergenic |
| TCTTATTCCCTTGACGAAGA+GGG | 0.573537 | 1.2:-82847779 | MS.gene065068:CDS |
| TTTGCCAACGAATATATACT+AGG | 0.575476 | 1.2:-82845493 | MS.gene065068:CDS |
| AGTTAAGCAATACTGTGAGA+TGG | 0.575944 | 1.2:-82847672 | MS.gene065068:CDS |
| AAGAATAGAGGTGATAAAGG+AGG | 0.578057 | 1.2:-82847442 | MS.gene065068:CDS |
| AATGCTGATGAATCGGCTTG+TGG | 0.578310 | 1.2:+82844497 | None:intergenic |
| TTCTTATTCCCTTGACGAAG+AGG | 0.581992 | 1.2:-82847780 | MS.gene065068:CDS |
| AAGGACAGTCCACTCCAAGA+TGG | 0.582320 | 1.2:+82844772 | None:intergenic |
| AAGACCCTTTGGCGGAGCAG+TGG | 0.583230 | 1.2:+82847079 | None:intergenic |
| TTCCCAAGTTGATAGGCACT+GGG | 0.584126 | 1.2:-82848358 | MS.gene065068:CDS |
| TATGTCTCGGATAAGAATTG+AGG | 0.588463 | 1.2:-82848396 | MS.gene065068:CDS |
| AGCCAAAACTTGGCCAGTCT+AGG | 0.590136 | 1.2:-82846971 | MS.gene065068:CDS |
| CCATCAATCTGACTAACAGA+TGG | 0.595071 | 1.2:+82845150 | None:intergenic |
| TGATACATTTAGTGACCTGA+AGG | 0.595305 | 1.2:-82844444 | MS.gene065068:intron |
| GCTTCTCGGAGAGCTGGAAG+AGG | 0.598962 | 1.2:+82845174 | None:intergenic |
| CAAGCTGGTTCAGCAGAGCA+AGG | 0.602199 | 1.2:-82847627 | MS.gene065068:CDS |
| GACCGGATCTGTAAGTGGTG+GGG | 0.605221 | 1.2:+82846941 | None:intergenic |
| GTTTGATCTGAGGAATGTTG+TGG | 0.605658 | 1.2:-82845205 | MS.gene065068:CDS |
| CCACTTTAAAAGACCAACAC+CGG | 0.605688 | 1.2:+82845420 | None:intergenic |
| AAAGTGACCGGATCTGTAAG+TGG | 0.607953 | 1.2:+82846936 | None:intergenic |
| GATTTGAATTATCAATCAGA+AGG | 0.611442 | 1.2:+82844753 | None:intergenic |
| GGTCAAGCCAGTGATGCCGC+CGG | 0.612112 | 1.2:-82845439 | MS.gene065068:CDS |
| GTCAGATTGATGGAGAATGG+AGG | 0.623551 | 1.2:-82845140 | MS.gene065068:intron |
| GTGACCGGATCTGTAAGTGG+TGG | 0.625034 | 1.2:+82846939 | None:intergenic |
| AGTCTCGTTTCCAGAAGAAG+AGG | 0.627045 | 1.2:+82845260 | None:intergenic |
| AATGTCACACTAAAACGAGA+TGG | 0.630100 | 1.2:-82846894 | MS.gene065068:CDS |
| CAGTGGCAGATGAAGTTAGA+CGG | 0.631872 | 1.2:+82847096 | None:intergenic |
| ATCGTTGAAAGCAGAAGGTG+AGG | 0.632089 | 1.2:-82847012 | MS.gene065068:CDS |
| CTAGGAATTCCATCTTGGAG+TGG | 0.636941 | 1.2:-82844781 | MS.gene065068:CDS |
| AAGTGAGATTGACAAGAGCA+AGG | 0.637473 | 1.2:-82847570 | MS.gene065068:intron |
| GTCTCGTTTCCAGAAGAAGA+GGG | 0.649029 | 1.2:+82845261 | None:intergenic |
| GATATGAGCATATCTAGCAG+TGG | 0.667660 | 1.2:-82847367 | MS.gene065068:CDS |
| AAAGGAATCAACATCAGTGG+GGG | 0.672209 | 1.2:+82847309 | None:intergenic |
| GTCACACTAAAACGAGATGG+CGG | 0.686876 | 1.2:-82846891 | MS.gene065068:CDS |
| AACATCATACCACTTAAGGG+TGG | 0.688096 | 1.2:-82844115 | MS.gene065068:CDS |
| CTTTAAAAGACCAACACCGG+CGG | 0.688739 | 1.2:+82845423 | None:intergenic |
| AGGGTGTGTCTTGAAAGAGA+TGG | 0.696577 | 1.2:+82845534 | None:intergenic |
| GATGTTAACTCACTTGTCAG+CGG | 0.717510 | 1.2:+82845367 | None:intergenic |
| AAAAGGAATCAACATCAGTG+GGG | 0.724123 | 1.2:+82847308 | None:intergenic |
| CATCACTGGCTTGACCAGTG+GGG | 0.736650 | 1.2:+82845446 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATAAAGATAATAAC+AGG | + | chr1.2:82847765-82847784 | None:intergenic | 10.0% |
| !! | GACAAAAAAAAATTAATTTA+AGG | + | chr1.2:82844585-82844604 | None:intergenic | 10.0% |
| !!! | GTTATTATCTTTATTTTTAT+TGG | - | chr1.2:82847765-82847784 | MS.gene065068:CDS | 10.0% |
| !! | TAAATGAAATATGTTGATAT+GGG | - | chr1.2:82846459-82846478 | MS.gene065068:intron | 15.0% |
| !! | TATATTGAAAATTGTATTTC+CGG | + | chr1.2:82846666-82846685 | None:intergenic | 15.0% |
| !! | TTGTCTGATTATAATATATT+TGG | - | chr1.2:82847804-82847823 | MS.gene065068:intron | 15.0% |
| !!! | GTTCATTACTTAATATTTTT+AGG | - | chr1.2:82844636-82844655 | MS.gene065068:intron | 15.0% |
| !!! | TATTGAATTTTATAAGGTTT+AGG | - | chr1.2:82844502-82844521 | MS.gene065068:CDS | 15.0% |
| !!! | TTGGTATATTGAATTTTATA+AGG | - | chr1.2:82844496-82844515 | MS.gene065068:CDS | 15.0% |
| !!! | TTTTTTAGCTAGATTTTTTT+AGG | - | chr1.2:82845985-82846004 | MS.gene065068:intron | 15.0% |
| !! | AATAACTCTTTATTCATGTT+AGG | + | chr1.2:82846938-82846957 | None:intergenic | 20.0% |
| !! | AATTATTCAAAATGAATTCC+TGG | + | chr1.2:82845717-82845736 | None:intergenic | 20.0% |
| !! | ACCAATCAATTGAAAATAAA+TGG | + | chr1.2:82844271-82844290 | None:intergenic | 20.0% |
| !! | ATAACTCTTTATTCATGTTA+GGG | + | chr1.2:82846937-82846956 | None:intergenic | 20.0% |
| !! | ATATTGAAAATTGTATTTCC+GGG | + | chr1.2:82846665-82846684 | None:intergenic | 20.0% |
| !! | ATTATAATATATTTGGCAGT+GGG | - | chr1.2:82847811-82847830 | MS.gene065068:intron | 20.0% |
| !! | ATTCAGAAACATGATAATAT+GGG | + | chr1.2:82845286-82845305 | None:intergenic | 20.0% |
| !! | CTAATTCAAACAAATTTAGT+TGG | + | chr1.2:82847478-82847497 | None:intergenic | 20.0% |
| !! | GATAATGTTTAAAAATCAGT+CGG | - | chr1.2:82845923-82845942 | MS.gene065068:intron | 20.0% |
| !! | GTAAATGAAATATGTTGATA+TGG | - | chr1.2:82846458-82846477 | MS.gene065068:intron | 20.0% |
| !! | TAAATGAAGAAATGAAACTT+AGG | + | chr1.2:82844440-82844459 | None:intergenic | 20.0% |
| !! | TATTCAGAAACATGATAATA+TGG | + | chr1.2:82845287-82845306 | None:intergenic | 20.0% |
| !! | TTTGTTTGAATTAGAATGTT+CGG | - | chr1.2:82847484-82847503 | MS.gene065068:intron | 20.0% |
| !!! | ATTGAATTTTATAGGTGTTT+TGG | - | chr1.2:82844477-82844496 | MS.gene065068:CDS | 20.0% |
| !!! | GAATGAATAAGAGAAATTTT+AGG | + | chr1.2:82846766-82846785 | None:intergenic | 20.0% |
| !!! | TCCATTTATTTTCAATTGAT+TGG | - | chr1.2:82844267-82844286 | MS.gene065068:intron | 20.0% |
| !!! | TTCAGTACATTGAATTTTAT+AGG | - | chr1.2:82844469-82844488 | MS.gene065068:CDS | 20.0% |
| !!! | TTTTAATCACATCATCATTT+GGG | - | chr1.2:82845769-82845788 | MS.gene065068:intron | 20.0% |
| ! | AAACTAAGGATCTTATGAAA+CGG | - | chr1.2:82844851-82844870 | MS.gene065068:intron | 25.0% |
| ! | AAGCTATCATTAATTCTGTT+AGG | - | chr1.2:82846254-82846273 | MS.gene065068:intron | 25.0% |
| ! | AGTGATATATGCATACAAAA+AGG | + | chr1.2:82846823-82846842 | None:intergenic | 25.0% |
| ! | ATTCAAACAAATTTAGTTGG+TGG | + | chr1.2:82847475-82847494 | None:intergenic | 25.0% |
| ! | CTCTAATTCTGCAATAAAAT+TGG | - | chr1.2:82847629-82847648 | MS.gene065068:CDS | 25.0% |
| ! | GAATAACAGTATTCAATTAC+TGG | - | chr1.2:82846135-82846154 | MS.gene065068:intron | 25.0% |
| ! | GATTATAATATATTTGGCAG+TGG | - | chr1.2:82847810-82847829 | MS.gene065068:intron | 25.0% |
| ! | GATTTGAATTATCAATCAGA+AGG | + | chr1.2:82847699-82847718 | None:intergenic | 25.0% |
| ! | GTGATATATGCATACAAAAA+GGG | + | chr1.2:82846822-82846841 | None:intergenic | 25.0% |
| ! | TAGTTAGGGAAGTTAATAAA+AGG | + | chr1.2:82846205-82846224 | None:intergenic | 25.0% |
| ! | TTCATTTCTTCATTTACATG+TGG | - | chr1.2:82844444-82844463 | MS.gene065068:intron | 25.0% |
| ! | TTCTGGCATTCAAATTTATT+TGG | - | chr1.2:82848054-82848073 | MS.gene065068:intron | 25.0% |
| ! | TTTAATCACATCATCATTTG+GGG | - | chr1.2:82845770-82845789 | MS.gene065068:intron | 25.0% |
| ! | TTTCAGAAAGAATACAAGTT+TGG | + | chr1.2:82844247-82844266 | None:intergenic | 25.0% |
| !! | AGTTTGAAACAATGTCAAAA+TGG | - | chr1.2:82848096-82848115 | MS.gene065068:intron | 25.0% |
| !! | CTTTTAATCACATCATCATT+TGG | - | chr1.2:82845768-82845787 | MS.gene065068:intron | 25.0% |
| !! | GCATTAAAACTGATTCAAAA+TGG | + | chr1.2:82844562-82844581 | None:intergenic | 25.0% |
| !! | TAATACCTTACAGGTATTTT+AGG | + | chr1.2:82846503-82846522 | None:intergenic | 25.0% |
| !! | TAATTGACTTATTTGAACCA+AGG | + | chr1.2:82845959-82845978 | None:intergenic | 25.0% |
| !! | TCAAAAGACAAATCAGTTTT+TGG | - | chr1.2:82845413-82845432 | MS.gene065068:CDS | 25.0% |
| !! | TTGATATGTGGTGTATTTTA+GGG | - | chr1.2:82846565-82846584 | MS.gene065068:intron | 25.0% |
| !! | TTTGATATGTGGTGTATTTT+AGG | - | chr1.2:82846564-82846583 | MS.gene065068:intron | 25.0% |
| !! | TTTTTGTATGCATATATCAC+TGG | - | chr1.2:82846822-82846841 | MS.gene065068:CDS | 25.0% |
| !!! | AAGTCATCAATTGATGATTT+TGG | + | chr1.2:82847553-82847572 | None:intergenic | 25.0% |
| !!! | AATCATTTTGGTTACCTATT+TGG | - | chr1.2:82846596-82846615 | MS.gene065068:intron | 25.0% |
| !!! | AGTCATCAATTGATGATTTT+GGG | + | chr1.2:82847552-82847571 | None:intergenic | 25.0% |
| !!! | ATCATTTTGGTTACCTATTT+GGG | - | chr1.2:82846597-82846616 | MS.gene065068:intron | 25.0% |
| !!! | ATTATGTTGCTTTTGATATG+TGG | - | chr1.2:82846553-82846572 | MS.gene065068:intron | 25.0% |
| !!! | ATTGACGAAATTGTTTTTAG+TGG | - | chr1.2:82844525-82844544 | MS.gene065068:intron | 25.0% |
| !!! | CTTCATTTTTTCTTCTTCAT+GGG | + | chr1.2:82846634-82846653 | None:intergenic | 25.0% |
| !!! | GTTAGTAATTTTGATGTTCA+AGG | - | chr1.2:82845582-82845601 | MS.gene065068:intron | 25.0% |
| !!! | TCTTCATTTTTTCTTCTTCA+TGG | + | chr1.2:82846635-82846654 | None:intergenic | 25.0% |
| !!! | TTGACGAAATTGTTTTTAGT+GGG | - | chr1.2:82844526-82844545 | MS.gene065068:intron | 25.0% |
| AAATTCCCATGATTTACATG+AGG | - | chr1.2:82845851-82845870 | MS.gene065068:intron | 30.0% | |
| ACAAACATCATACCACTTAA+GGG | - | chr1.2:82848331-82848350 | MS.gene065068:CDS | 30.0% | |
| ACTAAACCTCATGTAAATCA+TGG | + | chr1.2:82845860-82845879 | None:intergenic | 30.0% | |
| ATGAACTGAATATAAGAGCA+AGG | + | chr1.2:82844622-82844641 | None:intergenic | 30.0% | |
| ATTTATGACAACCAACCTTT+AGG | + | chr1.2:82845175-82845194 | None:intergenic | 30.0% | |
| ATTTCATTTACTTCTCTCTC+AGG | + | chr1.2:82846449-82846468 | None:intergenic | 30.0% | |
| CAAATTCTTAACCAAGAAGA+TGG | - | chr1.2:82845618-82845637 | MS.gene065068:intron | 30.0% | |
| CAAGGGAATAAGAATATTCA+GGG | + | chr1.2:82844663-82844682 | None:intergenic | 30.0% | |
| CATCTTCTTGGTTAAGAATT+TGG | + | chr1.2:82845620-82845639 | None:intergenic | 30.0% | |
| CGAATATATACTAGGTCTAA+AGG | - | chr1.2:82846964-82846983 | MS.gene065068:CDS | 30.0% | |
| CTAAACCTCATGTAAATCAT+GGG | + | chr1.2:82845859-82845878 | None:intergenic | 30.0% | |
| CTACTGTACAACCATTTAAT+AGG | - | chr1.2:82846314-82846333 | MS.gene065068:intron | 30.0% | |
| CTATTAAATGGTTGTACAGT+AGG | + | chr1.2:82846316-82846335 | None:intergenic | 30.0% | |
| CTTTCTCTGAACAATTGTTA+GGG | - | chr1.2:82847351-82847370 | MS.gene065068:CDS | 30.0% | |
| GAAAAGAATAGAGGTGATAA+AGG | - | chr1.2:82845004-82845023 | MS.gene065068:intron | 30.0% | |
| GGTGATGTACAAAAAAAAAC+TGG | + | chr1.2:82846745-82846764 | None:intergenic | 30.0% | |
| GTTCAGATTGAAAAGAATAG+AGG | - | chr1.2:82844995-82845014 | MS.gene065068:intron | 30.0% | |
| TAAGAATTTGGAGAGACAAT+TGG | + | chr1.2:82845608-82845627 | None:intergenic | 30.0% | |
| TACAAACATCATACCACTTA+AGG | - | chr1.2:82848330-82848349 | MS.gene065068:CDS | 30.0% | |
| TAGACCTAGTATATATTCGT+TGG | + | chr1.2:82846963-82846982 | None:intergenic | 30.0% | |
| TAGGGAAGTTAATAAAAGGA+GGG | + | chr1.2:82846201-82846220 | None:intergenic | 30.0% | |
| TCAAGGGAATAAGAATATTC+AGG | + | chr1.2:82844664-82844683 | None:intergenic | 30.0% | |
| TCTTTCTCTGAACAATTGTT+AGG | - | chr1.2:82847350-82847369 | MS.gene065068:CDS | 30.0% | |
| TGCTTGAATACTGATGTAAT+GGG | - | chr1.2:82848268-82848287 | MS.gene065068:CDS | 30.0% | |
| TTAAATGTAACGACTGTGAA+TGG | - | chr1.2:82845220-82845239 | MS.gene065068:CDS | 30.0% | |
| TTAGGGAAGTTAATAAAAGG+AGG | + | chr1.2:82846202-82846221 | None:intergenic | 30.0% | |
| TTCTCAATTTCCTGTCATAT+TGG | - | chr1.2:82844377-82844396 | MS.gene065068:intron | 30.0% | |
| TTGCTTGAATACTGATGTAA+TGG | - | chr1.2:82848267-82848286 | MS.gene065068:CDS | 30.0% | |
| TTTCTCTGAACAATTGTTAG+GGG | - | chr1.2:82847352-82847371 | MS.gene065068:CDS | 30.0% | |
| TTTGCCAACGAATATATACT+AGG | - | chr1.2:82846956-82846975 | MS.gene065068:CDS | 30.0% | |
| ! | AACCATGGTTTTTGTGTTTT+GGG | - | chr1.2:82847377-82847396 | MS.gene065068:CDS | 30.0% |
| ! | GTGAAACAAATTCTTTTTCC+TGG | - | chr1.2:82845804-82845823 | MS.gene065068:intron | 30.0% |
| ! | TGATTGATAATTCAAATCGC+AGG | - | chr1.2:82847701-82847720 | MS.gene065068:CDS | 30.0% |
| ! | TTATGTCAGCATTGAATATG+AGG | - | chr1.2:82847211-82847230 | MS.gene065068:intron | 30.0% |
| !! | AGCTTTTCACTTCTGAAAAT+AGG | + | chr1.2:82846093-82846112 | None:intergenic | 30.0% |
| !! | ATCAATTGATGATTTTGGGA+GGG | + | chr1.2:82847548-82847567 | None:intergenic | 30.0% |
| !! | CTTAAGATGAGCTGTTTTAT+GGG | - | chr1.2:82846021-82846040 | MS.gene065068:intron | 30.0% |
| !! | TTTAGTTTGCAGTGATATGT+TGG | - | chr1.2:82845874-82845893 | MS.gene065068:intron | 30.0% |
| !!! | TCATTTTGGTTACCTATTTG+GGG | - | chr1.2:82846598-82846617 | MS.gene065068:intron | 30.0% |
| AAAAATGAAGAGTTTGTGCC+CGG | - | chr1.2:82846644-82846663 | MS.gene065068:intron | 35.0% | |
| AAAAGGAATCAACATCAGTG+GGG | + | chr1.2:82845144-82845163 | None:intergenic | 35.0% | |
| AAACAAACAGAGCAACATAC+TGG | - | chr1.2:82844194-82844213 | MS.gene065068:intron | 35.0% | |
| AAACGCAAAAATCAGCTCAA+AGG | + | chr1.2:82844710-82844729 | None:intergenic | 35.0% | |
| AAATCGCAGGTATGCTAAAT+TGG | - | chr1.2:82847714-82847733 | MS.gene065068:CDS | 35.0% | |
| AACCCAAAACACAAAAACCA+TGG | + | chr1.2:82847382-82847401 | None:intergenic | 35.0% | |
| AAGAATAGAGGTGATAAAGG+AGG | - | chr1.2:82845007-82845026 | MS.gene065068:intron | 35.0% | |
| AATGTCACACTAAAACGAGA+TGG | - | chr1.2:82845555-82845574 | MS.gene065068:CDS | 35.0% | |
| ACTCTACTATTCTCTTCCTT+AGG | - | chr1.2:82845330-82845349 | MS.gene065068:intron | 35.0% | |
| AGAAAAGGAATCAACATCAG+TGG | + | chr1.2:82845146-82845165 | None:intergenic | 35.0% | |
| AGTTAAGCAATACTGTGAGA+TGG | - | chr1.2:82844777-82844796 | MS.gene065068:CDS | 35.0% | |
| ATGTCTCGGATAAGAATTGA+GGG | - | chr1.2:82844054-82844073 | MS.gene065068:CDS | 35.0% | |
| CAACCATTTAATAGGTGGTA+TGG | - | chr1.2:82846322-82846341 | MS.gene065068:intron | 35.0% | |
| CAATAGATAACATCTAAGCC+AGG | + | chr1.2:82845825-82845844 | None:intergenic | 35.0% | |
| CTACCATACCACCTATTAAA+TGG | + | chr1.2:82846328-82846347 | None:intergenic | 35.0% | |
| CTGGAAGACAACTAAAGTAT+CGG | - | chr1.2:82846841-82846860 | MS.gene065068:CDS | 35.0% | |
| CTGTACAACCATTTAATAGG+TGG | - | chr1.2:82846317-82846336 | MS.gene065068:intron | 35.0% | |
| CTTCAGGTCAATAAATGTGT+CGG | + | chr1.2:82848140-82848159 | None:intergenic | 35.0% | |
| CTTCATCAATGTTTGATCTG+AGG | - | chr1.2:82847234-82847253 | MS.gene065068:intron | 35.0% | |
| CTTGAATATGTCCATCTTCT+TGG | + | chr1.2:82845632-82845651 | None:intergenic | 35.0% | |
| GAAAAGGAATCAACATCAGT+GGG | + | chr1.2:82845145-82845164 | None:intergenic | 35.0% | |
| GAAATATGTTGATATGGGTG+TGG | - | chr1.2:82846464-82846483 | MS.gene065068:intron | 35.0% | |
| GAAGATGTTTGTATGACTGA+AGG | - | chr1.2:82848156-82848175 | MS.gene065068:intron | 35.0% | |
| GATAATATGGGCACAAAACA+AGG | + | chr1.2:82845274-82845293 | None:intergenic | 35.0% | |
| GTTCTCTCTGTCCAAAATAT+AGG | + | chr1.2:82846383-82846402 | None:intergenic | 35.0% | |
| TCAGTCATACAAACATCTTC+AGG | + | chr1.2:82848156-82848175 | None:intergenic | 35.0% | |
| TGATACATTTAGTGACCTGA+AGG | - | chr1.2:82848005-82848024 | MS.gene065068:intron | 35.0% | |
| TGTGTTCTCTGAGCATATTT+GGG | + | chr1.2:82848367-82848386 | None:intergenic | 35.0% | |
| TTAATAAAAGGAGGGAACAG+TGG | + | chr1.2:82846193-82846212 | None:intergenic | 35.0% | |
| TTAGGCCTAAAATACCTGTA+AGG | - | chr1.2:82846495-82846514 | MS.gene065068:intron | 35.0% | |
| TTAGTCAGATTGATGGAGAA+TGG | - | chr1.2:82847306-82847325 | MS.gene065068:CDS | 35.0% | |
| TTATCCATAACTGCAGTTGA+CGG | + | chr1.2:82848233-82848252 | None:intergenic | 35.0% | |
| TTGATGAAGTCATCTCTCTT+GGG | - | chr1.2:82844728-82844747 | MS.gene065068:intron | 35.0% | |
| TTTCTAATGCAGTCAACTGT+TGG | - | chr1.2:82847165-82847184 | MS.gene065068:intron | 35.0% | |
| TTTGATGAAGTCATCTCTCT+TGG | - | chr1.2:82844727-82844746 | MS.gene065068:intron | 35.0% | |
| ! | AGATGGACATATTCAAGTTC+AGG | - | chr1.2:82845635-82845654 | MS.gene065068:intron | 35.0% |
| ! | AGGGACTGAAACAATCATTT+TGG | - | chr1.2:82846584-82846603 | MS.gene065068:intron | 35.0% |
| ! | ATAGTTAGGCTAGGTTAGTT+AGG | + | chr1.2:82846220-82846239 | None:intergenic | 35.0% |
| ! | CAACCATGGTTTTTGTGTTT+TGG | - | chr1.2:82847376-82847395 | MS.gene065068:CDS | 35.0% |
| ! | GAGAAATGGTAACGATTGTA+GGG | + | chr1.2:82846294-82846313 | None:intergenic | 35.0% |
| ! | GTTAACTAAGTATGACTTGC+TGG | - | chr1.2:82844326-82844345 | MS.gene065068:intron | 35.0% |
| ! | GTTTGTTTGTTACAAGAAGC+AGG | + | chr1.2:82844182-82844201 | None:intergenic | 35.0% |
| ! | TAGTTAGGCTAGGTTAGTTA+GGG | + | chr1.2:82846219-82846238 | None:intergenic | 35.0% |
| ! | TCCCATTTCAGTTCGTTTTA+CGG | - | chr1.2:82847978-82847997 | MS.gene065068:intron | 35.0% |
| ! | TTGTGCGTTGTCCTATATTT+TGG | - | chr1.2:82846369-82846388 | MS.gene065068:intron | 35.0% |
| !! | AATGATAGCTTTAACTGCCT+TGG | + | chr1.2:82846245-82846264 | None:intergenic | 35.0% |
| !! | CATCAATTGATGATTTTGGG+AGG | + | chr1.2:82847549-82847568 | None:intergenic | 35.0% |
| !! | GCTTAAGATGAGCTGTTTTA+TGG | - | chr1.2:82846020-82846039 | MS.gene065068:intron | 35.0% |
| !! | TCAATTGATGATTTTGGGAG+GGG | + | chr1.2:82847547-82847566 | None:intergenic | 35.0% |
| !! | TGCAATAAAATTGGCTTTGC+AGG | - | chr1.2:82847638-82847657 | MS.gene065068:CDS | 35.0% |
| !!! | ACGAAATTGTTTTTAGTGGG+AGG | - | chr1.2:82844529-82844548 | MS.gene065068:intron | 35.0% |
| !!! | ATATCATGCCTTGTTTTTGC+AGG | - | chr1.2:82846871-82846890 | MS.gene065068:CDS | 35.0% |
| !!! | ATTGGTCTTTTCGTCTTGTT+AGG | - | chr1.2:82844285-82844304 | MS.gene065068:intron | 35.0% |
| !!! | TCTTTTTTGCTTCTCTTTGC+AGG | - | chr1.2:82848306-82848325 | MS.gene065068:CDS | 35.0% |
| AAAAAGGGTCTTGAGAAGAG+GGG | + | chr1.2:82846807-82846826 | None:intergenic | 40.0% | |
| AAAGGAATCAACATCAGTGG+GGG | + | chr1.2:82845143-82845162 | None:intergenic | 40.0% | |
| AACAATCCATACGAACCTTC+AGG | + | chr1.2:82848023-82848042 | None:intergenic | 40.0% | |
| AACATCATACCACTTAAGGG+TGG | - | chr1.2:82848334-82848353 | MS.gene065068:CDS | 40.0% | |
| AAGAGCAAGGTATGATTGGA+AGG | - | chr1.2:82844892-82844911 | MS.gene065068:intron | 40.0% | |
| AAGTGAGATTGACAAGAGCA+AGG | - | chr1.2:82844879-82844898 | MS.gene065068:intron | 40.0% | |
| AATCTTCTCACAGACATGGT+GGG | - | chr1.2:82846060-82846079 | MS.gene065068:intron | 40.0% | |
| ACAAAAAGGGTCTTGAGAAG+AGG | + | chr1.2:82846809-82846828 | None:intergenic | 40.0% | |
| AGTCCAAGAAGAATAAGGCT+TGG | + | chr1.2:82846417-82846436 | None:intergenic | 40.0% | |
| AGTTTGGACCTGCAAAAACA+AGG | + | chr1.2:82846882-82846901 | None:intergenic | 40.0% | |
| CAAAAAGGGTCTTGAGAAGA+GGG | + | chr1.2:82846808-82846827 | None:intergenic | 40.0% | |
| CACCTAGTCCAAGAAGAATA+AGG | + | chr1.2:82846422-82846441 | None:intergenic | 40.0% | |
| CCAGAAGGAGGAAAAGTTAT+TGG | + | chr1.2:82846166-82846185 | None:intergenic | 40.0% | |
| CCATCAATCTGACTAACAGA+TGG | + | chr1.2:82847302-82847321 | None:intergenic | 40.0% | |
| CCATCTGTTAGTCAGATTGA+TGG | - | chr1.2:82847299-82847318 | MS.gene065068:CDS | 40.0% | |
| CGAAGAAAAGCTTTACAAGC+TGG | - | chr1.2:82844807-82844826 | MS.gene065068:intron | 40.0% | |
| CGCACAACTATATGACCAAA+CGG | + | chr1.2:82846356-82846375 | None:intergenic | 40.0% | |
| CTGTGTTCTCTGAGCATATT+TGG | + | chr1.2:82848368-82848387 | None:intergenic | 40.0% | |
| GAAGTTGTTCAGCCAAAACT+TGG | - | chr1.2:82845468-82845487 | MS.gene065068:CDS | 40.0% | |
| GACAGGAAATTGAGAAGACA+TGG | + | chr1.2:82844373-82844392 | None:intergenic | 40.0% | |
| GAGCAACATACTGGAAGATT+TGG | - | chr1.2:82844203-82844222 | MS.gene065068:intron | 40.0% | |
| GAGCAAGGTCAATGAAACTA+AGG | - | chr1.2:82844837-82844856 | MS.gene065068:intron | 40.0% | |
| GATATGAGCATATCTAGCAG+TGG | - | chr1.2:82845082-82845101 | MS.gene065068:intron | 40.0% | |
| GATGTTAACTCACTTGTCAG+CGG | + | chr1.2:82847085-82847104 | None:intergenic | 40.0% | |
| GCAGGTATGCTAAATTGGAA+TGG | - | chr1.2:82847719-82847738 | MS.gene065068:CDS | 40.0% | |
| GCCGTAAAACGAACTGAAAT+GGG | + | chr1.2:82847982-82848001 | None:intergenic | 40.0% | |
| GGCAAAAACTATCCCCAAAT+AGG | + | chr1.2:82846613-82846632 | None:intergenic | 40.0% | |
| GGCACAAAAATTCTAGACTC+AGG | + | chr1.2:82844352-82844371 | None:intergenic | 40.0% | |
| GGGAAAGAATGCTGATGAAT+CGG | + | chr1.2:82847962-82847981 | None:intergenic | 40.0% | |
| GTCTGGTATAAATGAGCTGA+TGG | - | chr1.2:82847405-82847424 | MS.gene065068:CDS | 40.0% | |
| GTTAACATCGATCATTGACG+TGG | - | chr1.2:82847096-82847115 | MS.gene065068:CDS | 40.0% | |
| GTTCAATCTTCTCACAGACA+TGG | - | chr1.2:82846056-82846075 | MS.gene065068:intron | 40.0% | |
| GTTTGATCTGAGGAATGTTG+TGG | - | chr1.2:82847244-82847263 | MS.gene065068:intron | 40.0% | |
| TAACTGCCTTGGCTATAGTT+AGG | + | chr1.2:82846234-82846253 | None:intergenic | 40.0% | |
| TCCTCAACAGTTAAAGTGAC+CGG | + | chr1.2:82845528-82845547 | None:intergenic | 40.0% | |
| TCTGAGGAATGTTGTGGTTT+CGG | - | chr1.2:82847250-82847269 | MS.gene065068:intron | 40.0% | |
| TCTTATTCCCTTGACGAAGA+GGG | - | chr1.2:82844670-82844689 | MS.gene065068:intron | 40.0% | |
| TGACAAGAGCAAGGTATGAT+TGG | - | chr1.2:82844888-82844907 | MS.gene065068:intron | 40.0% | |
| TGCCGTAAAACGAACTGAAA+TGG | + | chr1.2:82847983-82848002 | None:intergenic | 40.0% | |
| TGGCTTGATTATCACCAGTT+TGG | + | chr1.2:82846898-82846917 | None:intergenic | 40.0% | |
| TGGTTGTACAGTAGGAGAAA+TGG | + | chr1.2:82846308-82846327 | None:intergenic | 40.0% | |
| TGTCTGTGAGAAGATTGAAC+AGG | + | chr1.2:82846056-82846075 | None:intergenic | 40.0% | |
| TTCTTATTCCCTTGACGAAG+AGG | - | chr1.2:82844669-82844688 | MS.gene065068:intron | 40.0% | |
| TTGGAATCGTTGAAAGCAGA+AGG | - | chr1.2:82845432-82845451 | MS.gene065068:CDS | 40.0% | |
| TTTCTACCAAGCCTAAAGGT+TGG | - | chr1.2:82845161-82845180 | MS.gene065068:CDS | 40.0% | |
| TTTGGTCCGTTAACGTCAAT+GGG | - | chr1.2:82845031-82845050 | MS.gene065068:intron | 40.0% | |
| ! | ACCTTTAGGCTTGGTAGAAA+AGG | + | chr1.2:82845161-82845180 | None:intergenic | 40.0% |
| ! | CCAATAACTTTTCCTCCTTC+TGG | - | chr1.2:82846163-82846182 | MS.gene065068:intron | 40.0% |
| ! | CCACTTTAAAAGACCAACAC+CGG | + | chr1.2:82847032-82847051 | None:intergenic | 40.0% |
| ! | CCTGTAAGGTATTACACTGA+CGG | - | chr1.2:82846509-82846528 | MS.gene065068:intron | 40.0% |
| ! | GGAGAAATGGTAACGATTGT+AGG | + | chr1.2:82846295-82846314 | None:intergenic | 40.0% |
| ! | GTCATATTGGTGCTTTCATG+AGG | - | chr1.2:82844390-82844409 | MS.gene065068:intron | 40.0% |
| ! | TCCTTTTCTACCAAGCCTAA+AGG | - | chr1.2:82845157-82845176 | MS.gene065068:CDS | 40.0% |
| ! | TGACTCTAGGAATTCCATCT+TGG | - | chr1.2:82847663-82847682 | MS.gene065068:CDS | 40.0% |
| !! | AGCCTTATTCTTCTTGGACT+AGG | - | chr1.2:82846417-82846436 | MS.gene065068:intron | 40.0% |
| !! | ATTCTGTTAGGTACTGATCG+TGG | - | chr1.2:82846266-82846285 | MS.gene065068:intron | 40.0% |
| !! | CAACCAAGCCTTATTCTTCT+TGG | - | chr1.2:82846411-82846430 | MS.gene065068:intron | 40.0% |
| !! | CATGAAAGCACCAATATGAC+AGG | + | chr1.2:82844390-82844409 | None:intergenic | 40.0% |
| !! | CGTCTTGTTAGGAGCATTAT+TGG | - | chr1.2:82844296-82844315 | MS.gene065068:intron | 40.0% |
| !! | GTGCTTTCATGAGGTTTTGA+CGG | - | chr1.2:82844399-82844418 | MS.gene065068:intron | 40.0% |
| !!! | TTGTGTTTTGGGTTGAAGTC+TGG | - | chr1.2:82847388-82847407 | MS.gene065068:CDS | 40.0% |
| !!! | TTGTTTTTGCAGGTCCAAAC+TGG | - | chr1.2:82846881-82846900 | MS.gene065068:CDS | 40.0% |
| AAAGTGACCGGATCTGTAAG+TGG | + | chr1.2:82845516-82845535 | None:intergenic | 45.0% | |
| AAGGGTCTTGGTATGAAGCT+TGG | - | chr1.2:82845384-82845403 | MS.gene065068:CDS | 45.0% | |
| ACCTAGCCTAACTATAGCCA+AGG | - | chr1.2:82846225-82846244 | MS.gene065068:intron | 45.0% | |
| AGAGGTGATAAAGGAGGCTT+TGG | - | chr1.2:82845013-82845032 | MS.gene065068:intron | 45.0% | |
| AGATGAAGTTAGACGGCCTA+AGG | + | chr1.2:82845349-82845368 | None:intergenic | 45.0% | |
| AGCAGGTACAGAGCTTCTAT+CGG | + | chr1.2:82844165-82844184 | None:intergenic | 45.0% | |
| AGCATATCTAGCAGTGGAAC+TGG | - | chr1.2:82845088-82845107 | MS.gene065068:intron | 45.0% | |
| AGCTTCATACCAAGACCCTT+TGG | + | chr1.2:82845384-82845403 | None:intergenic | 45.0% | |
| AGGGTGTGTCTTGAAAGAGA+TGG | + | chr1.2:82846918-82846937 | None:intergenic | 45.0% | |
| AGTCTCGTTTCCAGAAGAAG+AGG | + | chr1.2:82847192-82847211 | None:intergenic | 45.0% | |
| ATATTTGGCAGTGGGTCGAA+TGG | - | chr1.2:82847819-82847838 | MS.gene065068:intron | 45.0% | |
| ATCGTTGAAAGCAGAAGGTG+AGG | - | chr1.2:82845437-82845456 | MS.gene065068:CDS | 45.0% | |
| ATGGGTGTGGCTGTTCAATT+AGG | - | chr1.2:82846477-82846496 | MS.gene065068:intron | 45.0% | |
| CAATCTTCTCACAGACATGG+TGG | - | chr1.2:82846059-82846078 | MS.gene065068:intron | 45.0% | |
| CAATTGTTAGGGGACAACCA+TGG | - | chr1.2:82847362-82847381 | MS.gene065068:CDS | 45.0% | |
| CAGTGGCAGATGAAGTTAGA+CGG | + | chr1.2:82845356-82845375 | None:intergenic | 45.0% | |
| CCAGATCCCATTGACGTTAA+CGG | + | chr1.2:82845040-82845059 | None:intergenic | 45.0% | |
| CCGTCAGTGTAATACCTTAC+AGG | + | chr1.2:82846512-82846531 | None:intergenic | 45.0% | |
| CTAGGAATTCCATCTTGGAG+TGG | - | chr1.2:82847668-82847687 | MS.gene065068:CDS | 45.0% | |
| CTGTGAGAAGATTGAACAGG+TGG | + | chr1.2:82846053-82846072 | None:intergenic | 45.0% | |
| CTTGAGAAGAGGGGAAGAAT+CGG | + | chr1.2:82846798-82846817 | None:intergenic | 45.0% | |
| CTTTGGTCCGTTAACGTCAA+TGG | - | chr1.2:82845030-82845049 | MS.gene065068:intron | 45.0% | |
| GACTAACAGATGGTGCTTCT+CGG | + | chr1.2:82847292-82847311 | None:intergenic | 45.0% | |
| GCACAAAACAAGGCACAGTT+TGG | + | chr1.2:82845264-82845283 | None:intergenic | 45.0% | |
| GTCACACTAAAACGAGATGG+CGG | - | chr1.2:82845558-82845577 | MS.gene065068:CDS | 45.0% | |
| GTCAGATTGATGGAGAATGG+AGG | - | chr1.2:82847309-82847328 | MS.gene065068:CDS | 45.0% | |
| GTCTCGTTTCCAGAAGAAGA+GGG | + | chr1.2:82847191-82847210 | None:intergenic | 45.0% | |
| GTTCTCTGAGCATATTTGGG+AGG | + | chr1.2:82848364-82848383 | None:intergenic | 45.0% | |
| TAGGTCTAAAGGATCCCAAC+AGG | - | chr1.2:82846975-82846994 | MS.gene065068:CDS | 45.0% | |
| TAGTGACCTGAAGGTTCGTA+TGG | - | chr1.2:82848014-82848033 | MS.gene065068:intron | 45.0% | |
| TATATTTGGCAGTGGGTCGA+TGG | - | chr1.2:82847818-82847837 | MS.gene065068:intron | 45.0% | |
| TGACAACCAACCTTTAGGCT+TGG | + | chr1.2:82845170-82845189 | None:intergenic | 45.0% | |
| TTCATACCAAGACCCTTTGG+CGG | + | chr1.2:82845381-82845400 | None:intergenic | 45.0% | |
| TTCCCAGTGCCTATCAACTT+GGG | + | chr1.2:82844096-82844115 | None:intergenic | 45.0% | |
| TTTCCCAGTGCCTATCAACT+TGG | + | chr1.2:82844097-82844116 | None:intergenic | 45.0% | |
| ! | CTTTAAAAGACCAACACCGG+CGG | + | chr1.2:82847029-82847048 | None:intergenic | 45.0% |
| ! | TCCGGTCACTTTAACTGTTG+AGG | - | chr1.2:82845524-82845543 | MS.gene065068:CDS | 45.0% |
| ! | TGCAGTTGACGGATGGTATA+AGG | + | chr1.2:82848222-82848241 | None:intergenic | 45.0% |
| !! | AATGCTGATGAATCGGCTTG+TGG | + | chr1.2:82847955-82847974 | None:intergenic | 45.0% |
| !! | ATTGATGATTTTGGGAGGGG+AGG | + | chr1.2:82847544-82847563 | None:intergenic | 45.0% |
| !! | GCAGCATTTCCCAAGTTGAT+AGG | - | chr1.2:82844084-82844103 | MS.gene065068:CDS | 45.0% |
| !! | TCTAGCAGTGGAACTGGTTT+TGG | - | chr1.2:82845094-82845113 | MS.gene065068:intron | 45.0% |
| !! | TTCCCAAGTTGATAGGCACT+GGG | - | chr1.2:82844091-82844110 | MS.gene065068:CDS | 45.0% |
| !! | TTGATGATTTTGGGAGGGGA+GGG | + | chr1.2:82847543-82847562 | None:intergenic | 45.0% |
| !! | TTTCCCAAGTTGATAGGCAC+TGG | - | chr1.2:82844090-82844109 | MS.gene065068:CDS | 45.0% |
| !!! | AGTGGAACTGGTTTTGGAAG+TGG | - | chr1.2:82845100-82845119 | MS.gene065068:intron | 45.0% |
| !!! | CCGGTGTTGGTCTTTTAAAG+TGG | - | chr1.2:82847029-82847048 | MS.gene065068:CDS | 45.0% |
| !!! | TTTGGAAGTGGCTCTGGTTT+TGG | - | chr1.2:82845112-82845131 | MS.gene065068:intron | 45.0% |
| !! | ACAAAAAAAAATTAATTTAA+GGG | + | chr1.2:82844584-82844603 | None:intergenic | 5.0% |
| AACTGTTGGCCCTCTTCTTC+TGG | - | chr1.2:82847179-82847198 | MS.gene065068:intron | 50.0% | |
| AAGGACAGTCCACTCCAAGA+TGG | + | chr1.2:82847680-82847699 | None:intergenic | 50.0% | |
| AGCCAAAACTTGGCCAGTCT+AGG | - | chr1.2:82845478-82845497 | MS.gene065068:CDS | 50.0% | |
| AGTCACAGCACACAGAGCTT+GGG | + | chr1.2:82845680-82845699 | None:intergenic | 50.0% | |
| AGTCATCTCTCTTGGGCACA+AGG | - | chr1.2:82844735-82844754 | MS.gene065068:intron | 50.0% | |
| CAGTCGGTATGCAAGTTCCT+TGG | - | chr1.2:82845939-82845958 | MS.gene065068:intron | 50.0% | |
| CCATAACTGCAGTTGACGGA+TGG | + | chr1.2:82848229-82848248 | None:intergenic | 50.0% | |
| CCATCCGTCAACTGCAGTTA+TGG | - | chr1.2:82848226-82848245 | MS.gene065068:CDS | 50.0% | |
| CCGTTAACGTCAATGGGATC+TGG | - | chr1.2:82845037-82845056 | MS.gene065068:intron | 50.0% | |
| GCAGATACCCTCTTCGTCAA+GGG | + | chr1.2:82844680-82844699 | None:intergenic | 50.0% | |
| GCCTTGGCTATAGTTAGGCT+AGG | + | chr1.2:82846229-82846248 | None:intergenic | 50.0% | |
| GGAGGATTACCACCCTTAAG+TGG | + | chr1.2:82848346-82848365 | None:intergenic | 50.0% | |
| GGCTTTGCAGGTATGACTCT+AGG | - | chr1.2:82847650-82847669 | MS.gene065068:CDS | 50.0% | |
| GGTATGGTAGCACAACCGTT+TGG | - | chr1.2:82846338-82846357 | MS.gene065068:intron | 50.0% | |
| TGACCGGATCTGTAAGTGGT+GGG | + | chr1.2:82845512-82845531 | None:intergenic | 50.0% | |
| TGCAGATACCCTCTTCGTCA+AGG | + | chr1.2:82844681-82844700 | None:intergenic | 50.0% | |
| ! | TCTCACAGACATGGTGGGAT+CGG | - | chr1.2:82846065-82846084 | MS.gene065068:intron | 50.0% |
| !! | AACAGTGGATTGCCAGAAGG+AGG | + | chr1.2:82846178-82846197 | None:intergenic | 50.0% |
| !! | GACTGCTGGTTTGCATAACC+AGG | - | chr1.2:82845696-82845715 | MS.gene065068:intron | 50.0% |
| !! | GTCCTAGACTGGCCAAGTTT+TGG | + | chr1.2:82845483-82845502 | None:intergenic | 50.0% |
| !! | TGATGATTTTGGGAGGGGAG+GGG | + | chr1.2:82847542-82847561 | None:intergenic | 50.0% |
| !!! | ACTGGTTTTGGAAGTGGCTC+TGG | - | chr1.2:82845106-82845125 | MS.gene065068:intron | 50.0% |
| CAGTCACAGCACACAGAGCT+TGG | + | chr1.2:82845681-82845700 | None:intergenic | 55.0% | |
| GACCGGATCTGTAAGTGGTG+GGG | + | chr1.2:82845511-82845530 | None:intergenic | 55.0% | |
| GTGACCGGATCTGTAAGTGG+TGG | + | chr1.2:82845513-82845532 | None:intergenic | 55.0% | |
| TGCCCCACCACTTACAGATC+CGG | - | chr1.2:82845506-82845525 | MS.gene065068:CDS | 55.0% | |
| ! | CAAGCTGGTTCAGCAGAGCA+AGG | - | chr1.2:82844822-82844841 | MS.gene065068:intron | 55.0% |
| !! | CAGCGGCACCATTGACTCAT+CGG | + | chr1.2:82847068-82847087 | None:intergenic | 55.0% |
| !! | CATCACTGGCTTGACCAGTG+GGG | + | chr1.2:82847006-82847025 | None:intergenic | 55.0% |
| !! | GCAGAGCACCGATGAGTCAA+TGG | - | chr1.2:82847057-82847076 | MS.gene065068:CDS | 55.0% |
| !! | GCATCACTGGCTTGACCAGT+GGG | + | chr1.2:82847007-82847026 | None:intergenic | 55.0% |
| !! | GGGAACAGTGGATTGCCAGA+AGG | + | chr1.2:82846181-82846200 | None:intergenic | 55.0% |
| AAGACCCTTTGGCGGAGCAG+TGG | + | chr1.2:82845373-82845392 | None:intergenic | 60.0% | |
| ACCAGTGGGGAAAGGCCTGT+TGG | + | chr1.2:82846993-82847012 | None:intergenic | 60.0% | |
| ACTGCTCCGCCAAAGGGTCT+TGG | - | chr1.2:82845372-82845391 | MS.gene065068:intron | 60.0% | |
| ATCTGCCACTGCTCCGCCAA+AGG | - | chr1.2:82845365-82845384 | MS.gene065068:intron | 60.0% | |
| CCAGTGGGGAAAGGCCTGTT+GGG | + | chr1.2:82846992-82847011 | None:intergenic | 60.0% | |
| GATGGTGCTTCTCGGAGAGC+TGG | + | chr1.2:82847284-82847303 | None:intergenic | 60.0% | |
| GCTCTGTGTGCTGTGACTGC+TGG | - | chr1.2:82845682-82845701 | MS.gene065068:intron | 60.0% | |
| GCTTCTCGGAGAGCTGGAAG+AGG | + | chr1.2:82847278-82847297 | None:intergenic | 60.0% | |
| TCTGCCACTGCTCCGCCAAA+GGG | - | chr1.2:82845366-82845385 | MS.gene065068:intron | 60.0% | |
| ! | CTGGCTTGACCAGTGGGGAA+AGG | + | chr1.2:82847001-82847020 | None:intergenic | 60.0% |
| !! | GGCATCACTGGCTTGACCAG+TGG | + | chr1.2:82847008-82847027 | None:intergenic | 60.0% |
| !! | TGATTTTGGGAGGGGAGGGG+AGG | + | chr1.2:82847539-82847558 | None:intergenic | 60.0% |
| ACCAACACCGGCGGCATCAC+TGG | + | chr1.2:82847020-82847039 | None:intergenic | 65.0% | |
| AGGGGAGGGGAGGAGCAATG+TGG | + | chr1.2:82847529-82847548 | None:intergenic | 65.0% | |
| CCCAACAGGCCTTTCCCCAC+TGG | - | chr1.2:82846989-82847008 | MS.gene065068:CDS | 65.0% | |
| GGGGAGGGGAGGAGCAATGT+GGG | + | chr1.2:82847528-82847547 | None:intergenic | 65.0% | |
| GGTCAAGCCAGTGATGCCGC+CGG | - | chr1.2:82847010-82847029 | MS.gene065068:CDS | 65.0% | |
| GTGGGGCAGCTGTCCTAGAC+TGG | + | chr1.2:82845494-82845513 | None:intergenic | 65.0% | |
| GCCAGTGATGCCGCCGGTGT+TGG | - | chr1.2:82847016-82847035 | MS.gene065068:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 82844054 | 82848417 | 82844054 | ID=MS.gene065068 |
| chr1.2 | mRNA | 82844054 | 82848417 | 82844054 | ID=MS.gene065068.t1;Parent=MS.gene065068 |
| chr1.2 | exon | 82848220 | 82848417 | 82848220 | ID=MS.gene065068.t1.exon1;Parent=MS.gene065068.t1 |
| chr1.2 | CDS | 82848220 | 82848417 | 82848220 | ID=cds.MS.gene065068.t1;Parent=MS.gene065068.t1 |
| chr1.2 | exon | 82847571 | 82847813 | 82847571 | ID=MS.gene065068.t1.exon2;Parent=MS.gene065068.t1 |
| chr1.2 | CDS | 82847571 | 82847813 | 82847571 | ID=cds.MS.gene065068.t1;Parent=MS.gene065068.t1 |
| chr1.2 | exon | 82847293 | 82847470 | 82847293 | ID=MS.gene065068.t1.exon3;Parent=MS.gene065068.t1 |
| chr1.2 | CDS | 82847293 | 82847470 | 82847293 | ID=cds.MS.gene065068.t1;Parent=MS.gene065068.t1 |
| chr1.2 | exon | 82846815 | 82847119 | 82846815 | ID=MS.gene065068.t1.exon4;Parent=MS.gene065068.t1 |
| chr1.2 | CDS | 82846815 | 82847119 | 82846815 | ID=cds.MS.gene065068.t1;Parent=MS.gene065068.t1 |
| chr1.2 | exon | 82845380 | 82845578 | 82845380 | ID=MS.gene065068.t1.exon5;Parent=MS.gene065068.t1 |
| chr1.2 | CDS | 82845380 | 82845578 | 82845380 | ID=cds.MS.gene065068.t1;Parent=MS.gene065068.t1 |
| chr1.2 | exon | 82845141 | 82845294 | 82845141 | ID=MS.gene065068.t1.exon6;Parent=MS.gene065068.t1 |
| chr1.2 | CDS | 82845141 | 82845294 | 82845141 | ID=cds.MS.gene065068.t1;Parent=MS.gene065068.t1 |
| chr1.2 | exon | 82844749 | 82844811 | 82844749 | ID=MS.gene065068.t1.exon7;Parent=MS.gene065068.t1 |
| chr1.2 | CDS | 82844749 | 82844811 | 82844749 | ID=cds.MS.gene065068.t1;Parent=MS.gene065068.t1 |
| chr1.2 | exon | 82844445 | 82844541 | 82844445 | ID=MS.gene065068.t1.exon8;Parent=MS.gene065068.t1 |
| chr1.2 | CDS | 82844445 | 82844541 | 82844445 | ID=cds.MS.gene065068.t1;Parent=MS.gene065068.t1 |
| chr1.2 | exon | 82844054 | 82844143 | 82844054 | ID=MS.gene065068.t1.exon9;Parent=MS.gene065068.t1 |
| chr1.2 | CDS | 82844054 | 82844143 | 82844054 | ID=cds.MS.gene065068.t1;Parent=MS.gene065068.t1 |
| Gene Sequence |
| Protein sequence |
