Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067101.t1 | XP_013451319.1 | 91 | 885 | 75 | 1 | 1 | 880 | 1 | 885 | 0.00E+00 | 1547.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067101.t1 | A0A072U6K8 | 91.0 | 885 | 75 | 1 | 1 | 880 | 1 | 885 | 0.0e+00 | 1547.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049850 | MS.gene067101 | 0.812074 | 5.09E-51 | -1.69E-46 |
| MS.gene050020 | MS.gene067101 | 0.843314 | 1.51E-58 | -1.69E-46 |
| MS.gene050901 | MS.gene067101 | 0.807249 | 5.54E-50 | -1.69E-46 |
| MS.gene051199 | MS.gene067101 | 0.830513 | 2.82E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene067101 | 0.809146 | 2.19E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene067101 | 0.822692 | 2.07E-53 | -1.69E-46 |
| MS.gene051664 | MS.gene067101 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene067101 | 0.802784 | 4.76E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene067101 | 0.821266 | 4.42E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene067101 | 0.806061 | 9.88E-50 | -1.69E-46 |
| MS.gene052456 | MS.gene067101 | 0.825677 | 4.11E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene067101 | 0.800037 | 1.74E-48 | -1.69E-46 |
| MS.gene052611 | MS.gene067101 | 0.800048 | 1.73E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene067101 | 0.804901 | 1.73E-49 | -1.69E-46 |
| MS.gene053296 | MS.gene067101 | 0.800895 | 1.16E-48 | -1.69E-46 |
| MS.gene053383 | MS.gene067101 | 0.824583 | 7.46E-54 | -1.69E-46 |
| MS.gene055359 | MS.gene067101 | 0.825135 | 5.53E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene067101 | 0.813778 | 2.15E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene067101 | 0.824746 | 6.83E-54 | -1.69E-46 |
| MS.gene056005 | MS.gene067101 | 0.813179 | 2.92E-51 | -1.69E-46 |
| MS.gene056169 | MS.gene067101 | 0.809063 | 2.28E-50 | -1.69E-46 |
| MS.gene057022 | MS.gene067101 | 0.818631 | 1.77E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene067101 | 0.801657 | 8.12E-49 | -1.69E-46 |
| MS.gene060701 | MS.gene067101 | 0.81659 | 5.11E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067101.t1 | MTR_6g018770 | 93.785 | 885 | 50 | 1 | 1 | 880 | 1 | 885 | 0.0 | 1589 |
| MS.gene067101.t1 | MTR_7g082220 | 48.361 | 976 | 372 | 31 | 1 | 879 | 1 | 941 | 0.0 | 655 |
| MS.gene067101.t1 | MTR_4g008820 | 46.555 | 479 | 196 | 19 | 13 | 467 | 210 | 652 | 1.29e-81 | 277 |
| MS.gene067101.t1 | MTR_7g112030 | 36.538 | 104 | 64 | 2 | 770 | 873 | 807 | 908 | 1.50e-13 | 75.5 |
| MS.gene067101.t1 | MTR_1g083850 | 29.213 | 178 | 111 | 6 | 703 | 872 | 577 | 747 | 2.22e-13 | 74.7 |
| MS.gene067101.t1 | MTR_2g034810 | 25.000 | 184 | 119 | 7 | 698 | 875 | 753 | 923 | 7.89e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067101.t1 | AT1G67040 | 30.810 | 938 | 471 | 40 | 1 | 872 | 1 | 826 | 4.47e-80 | 276 |
| MS.gene067101.t1 | AT1G67040 | 30.704 | 938 | 470 | 41 | 1 | 872 | 1 | 824 | 2.42e-79 | 274 |
Find 158 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGAAAATGAAGATTTCT+TGG | 0.196487 | 6.3:-14809288 | None:intergenic |
| ATGCATGAAGGCTGAGATTT+TGG | 0.209163 | 6.3:+14811866 | MS.gene067101:CDS |
| TTCTGTCACAATGCCGTTAT+TGG | 0.209571 | 6.3:-14809669 | None:intergenic |
| GATTCTTTGAACAAGTTTAA+AGG | 0.217010 | 6.3:+14808743 | MS.gene067101:CDS |
| TGAAGATGTGCTTCAAATTT+TGG | 0.251852 | 6.3:+14812034 | MS.gene067101:CDS |
| TTCATTGCTGAATTGGTTCT+TGG | 0.260531 | 6.3:+14811618 | MS.gene067101:CDS |
| TAGTTCACCTCTAAAGAAAA+AGG | 0.274374 | 6.3:+14810441 | MS.gene067101:CDS |
| ACAAATCATGTTGGATTATT+CGG | 0.275766 | 6.3:+14811201 | MS.gene067101:CDS |
| GATCTTGGAACCTGGTTTGC+AGG | 0.281086 | 6.3:+14809595 | MS.gene067101:CDS |
| ATCAATTCGGTAAACAAGTT+TGG | 0.298864 | 6.3:-14811520 | None:intergenic |
| AATTGCTGCCAAAACTATTA+TGG | 0.298910 | 6.3:+14811804 | MS.gene067101:CDS |
| TTTGGATTGTAGATTGCTAA+TGG | 0.300946 | 6.3:+14809125 | MS.gene067101:intron |
| CCTTCATGTTTCAACCGTTC+AGG | 0.309083 | 6.3:-14811438 | None:intergenic |
| CAAACCGCATGGAGGCTTAA+AGG | 0.309387 | 6.3:+14810027 | MS.gene067101:CDS |
| ACCAAATGGAGTTGGGAATT+AGG | 0.310684 | 6.3:-14808779 | None:intergenic |
| GACATTTGCCATTGAACATT+TGG | 0.315673 | 6.3:-14810687 | None:intergenic |
| TGAGTCACTCATTGGGAAAA+TGG | 0.316669 | 6.3:+14811967 | MS.gene067101:CDS |
| TACTACCTTGTTCATCTTAT+CGG | 0.321674 | 6.3:-14810407 | None:intergenic |
| TGCAAGCACATATATTCTTC+TGG | 0.326935 | 6.3:-14809987 | None:intergenic |
| GCCATTGAACATTTGGTCAT+TGG | 0.337243 | 6.3:-14810680 | None:intergenic |
| TAAACACACCATAATAGTTT+TGG | 0.339049 | 6.3:-14811812 | None:intergenic |
| AGTTATCTTCATTGCTGAAT+TGG | 0.339654 | 6.3:+14811611 | MS.gene067101:CDS |
| TGATGATGGTGAGGAGTCTT+TGG | 0.341754 | 6.3:+14809313 | MS.gene067101:CDS |
| AACAGAAGCTGAAAGAATTA+AGG | 0.344196 | 6.3:+14810551 | MS.gene067101:CDS |
| CATTTGACATTAGAATTGTT+TGG | 0.355599 | 6.3:-14810361 | None:intergenic |
| TTTAATCGAAACCAACTTAA+GGG | 0.357961 | 6.3:+14811744 | MS.gene067101:CDS |
| TCAGGGGTCGATGATGTCTT+TGG | 0.362655 | 6.3:-14810501 | None:intergenic |
| GAAAATGAGGAGTTGGTTAC+TGG | 0.364580 | 6.3:+14810580 | MS.gene067101:CDS |
| GGAAGATGCAAGAAAACATT+TGG | 0.365373 | 6.3:-14809630 | None:intergenic |
| GCCTAATTCCCAACTCCATT+TGG | 0.368909 | 6.3:+14808778 | MS.gene067101:CDS |
| TCAGAACCTTGTCTGCTTGA+AGG | 0.375714 | 6.3:-14810298 | None:intergenic |
| TTTGCAATATCTTATCAATT+CGG | 0.382071 | 6.3:-14811533 | None:intergenic |
| TCTGGTATAGACAAGTCATT+AGG | 0.386944 | 6.3:+14809740 | MS.gene067101:CDS |
| TCATTTAACACAGGAAAGAT+AGG | 0.389980 | 6.3:+14811483 | MS.gene067101:CDS |
| GAAGAGTCCGAGAATTTCTT+CGG | 0.392103 | 6.3:+14809526 | MS.gene067101:CDS |
| ATCTCAGCCTTCATGCATAA+AGG | 0.401946 | 6.3:-14811861 | None:intergenic |
| AAGCTAGGTGGTGGTTGTAT+TGG | 0.402353 | 6.3:+14808076 | MS.gene067101:CDS |
| GATTTATCTCTCTTTGAAGA+TGG | 0.402536 | 6.3:-14809266 | None:intergenic |
| AATCAATCATGTTATAATTC+TGG | 0.408879 | 6.3:+14809722 | MS.gene067101:CDS |
| AACTAAACCAAGTAATTGAT+TGG | 0.409723 | 6.3:+14811940 | MS.gene067101:CDS |
| TTGGGAGATGAGTCACTCAT+TGG | 0.418329 | 6.3:+14811959 | MS.gene067101:CDS |
| CTCTTTCCCGAAGAAATTCT+CGG | 0.418867 | 6.3:-14809533 | None:intergenic |
| TTGGATTGTAGATTGCTAAT+GGG | 0.423160 | 6.3:+14809126 | MS.gene067101:intron |
| CTGGTATAGACAAGTCATTA+GGG | 0.423338 | 6.3:+14809741 | MS.gene067101:CDS |
| CACTTAAAACATCTTCTCTC+AGG | 0.424535 | 6.3:-14810519 | None:intergenic |
| TCATCTCCCAATCAATTACT+TGG | 0.431669 | 6.3:-14811947 | None:intergenic |
| CACATATATTCTTCTGGAAG+TGG | 0.436122 | 6.3:-14809981 | None:intergenic |
| GCCTCAGAAGCTTCGGAAAA+CGG | 0.442167 | 6.3:+14809370 | MS.gene067101:CDS |
| TTTGAGGCGGGTGTTGATAT+TGG | 0.445664 | 6.3:+14812011 | MS.gene067101:CDS |
| CAAACAGAAATCCCTTAAGT+TGG | 0.447740 | 6.3:-14811755 | None:intergenic |
| GTGAAAACATTTGAAACAAT+AGG | 0.449483 | 6.3:-14809815 | None:intergenic |
| TAAGAACAATTTATAGAGCC+AGG | 0.449521 | 6.3:-14811408 | None:intergenic |
| AAGAGTCCGAGAATTTCTTC+GGG | 0.450925 | 6.3:+14809527 | MS.gene067101:CDS |
| AGAAGAGCAGTAACTAGGTT+TGG | 0.451888 | 6.3:+14809404 | MS.gene067101:CDS |
| GAGTCTTGTAGCTAGGTTGA+TGG | 0.454113 | 6.3:+14809229 | MS.gene067101:CDS |
| ATTAAGGTCTAGAGAAAATG+AGG | 0.458749 | 6.3:+14810567 | MS.gene067101:CDS |
| TTTGGTCATTGGAACATGTT+TGG | 0.464261 | 6.3:-14810669 | None:intergenic |
| GTCTAGAGAAAATGAGGAGT+TGG | 0.467713 | 6.3:+14810573 | MS.gene067101:CDS |
| CTGTTTGTAGCCTGCAAACC+AGG | 0.470209 | 6.3:-14809605 | None:intergenic |
| TGTTCTTACCAAATGGAGTT+GGG | 0.472016 | 6.3:-14808786 | None:intergenic |
| GATGCAAATTTGATCTAGAA+AGG | 0.476115 | 6.3:+14810272 | MS.gene067101:CDS |
| GAAGCTTCCAAGACTGATCC+AGG | 0.477697 | 6.3:-14811252 | None:intergenic |
| GATTAAGAAGTGGGAATGTA+TGG | 0.479978 | 6.3:+14811908 | MS.gene067101:CDS |
| CACCGACTTCTCTTCAGCAT+CGG | 0.480466 | 6.3:+14809835 | MS.gene067101:CDS |
| ATCGAGACTACTGGAAGAAA+AGG | 0.481977 | 6.3:-14811274 | None:intergenic |
| TGAGCCTTCATCGAGACTAC+TGG | 0.485738 | 6.3:-14811283 | None:intergenic |
| TAAGAGTGAGATTAAGAAGT+GGG | 0.487969 | 6.3:+14811899 | MS.gene067101:CDS |
| AGTGGAAATAAAGACTTTGT+CGG | 0.490289 | 6.3:+14810193 | MS.gene067101:CDS |
| AGAAGCGGCTACTAAGATCT+TGG | 0.491388 | 6.3:+14809580 | MS.gene067101:CDS |
| AGTCAAGGCCTCAGAAGCTT+CGG | 0.491390 | 6.3:+14809363 | MS.gene067101:CDS |
| AGAGGTGAACTAAAGGTAGA+TGG | 0.495533 | 6.3:-14810430 | None:intergenic |
| TCTCAGTCCTGGATCAGTCT+TGG | 0.495904 | 6.3:+14811245 | MS.gene067101:CDS |
| ACTAAACCAAGTAATTGATT+GGG | 0.497729 | 6.3:+14811941 | MS.gene067101:CDS |
| TAACGGCATTGTGACAGAAA+TGG | 0.498435 | 6.3:+14809673 | MS.gene067101:CDS |
| TTTCTTTAGAGGTGAACTAA+AGG | 0.500467 | 6.3:-14810437 | None:intergenic |
| CATAAAACTCAAACACAAGA+AGG | 0.500478 | 6.3:+14810079 | MS.gene067101:CDS |
| TCAAAGTGTCCTACCAATAA+CGG | 0.502704 | 6.3:+14809656 | MS.gene067101:CDS |
| AAGATCATAGCTCATGTTGA+TGG | 0.503734 | 6.3:+14809923 | MS.gene067101:CDS |
| GAAATTCTCGGACTCTTCAA+AGG | 0.504286 | 6.3:-14809521 | None:intergenic |
| ATGTTCTTACCAAATGGAGT+TGG | 0.504634 | 6.3:-14808787 | None:intergenic |
| TCTAATGTCAAATGTAAAAG+AGG | 0.505745 | 6.3:+14810370 | MS.gene067101:CDS |
| ATTGGTAGGACACTTTGAAA+TGG | 0.506348 | 6.3:-14809651 | None:intergenic |
| ACGAGAGAAGAGCAGTAACT+AGG | 0.521472 | 6.3:+14809399 | MS.gene067101:CDS |
| TGGGAGATGAGTCACTCATT+GGG | 0.526532 | 6.3:+14811960 | MS.gene067101:CDS |
| TCCAATGACCAAATGTTCAA+TGG | 0.528320 | 6.3:+14810679 | MS.gene067101:CDS |
| AAGAAGAATAATCAAAAGCT+AGG | 0.529032 | 6.3:+14808061 | MS.gene067101:CDS |
| AGTGATGATGCTAGTGTGAA+TGG | 0.540323 | 6.3:+14808013 | MS.gene067101:CDS |
| AGTAGTCTCGATGAAGGCTC+AGG | 0.544009 | 6.3:+14811285 | MS.gene067101:CDS |
| CATGGAGGCTTAAAGGATGA+TGG | 0.544031 | 6.3:+14810034 | MS.gene067101:CDS |
| TCTTCCAGTAGTCTCGATGA+AGG | 0.544529 | 6.3:+14811279 | MS.gene067101:CDS |
| TTAAGAGTGAGATTAAGAAG+TGG | 0.550047 | 6.3:+14811898 | MS.gene067101:CDS |
| AAGAAGTGGGAATGTATGGT+TGG | 0.555304 | 6.3:+14811912 | MS.gene067101:CDS |
| AAAATTCCTCTGCGTAGCAT+CGG | 0.555522 | 6.3:-14811724 | None:intergenic |
| CATGTTTCAACCGTTCAGGT+TGG | 0.559219 | 6.3:-14811434 | None:intergenic |
| TGTTTAAGTCATGGTGTGCA+TGG | 0.560555 | 6.3:+14811829 | MS.gene067101:CDS |
| ACTTAAAACATCTTCTCTCA+GGG | 0.561542 | 6.3:-14810518 | None:intergenic |
| CATGAGCTATGATCTTCTCC+TGG | 0.566492 | 6.3:-14809916 | None:intergenic |
| AGGTCAAAGCTGCGAATGCA+AGG | 0.569077 | 6.3:+14809336 | MS.gene067101:CDS |
| TGTAGTTCTTCTCAGAAGCC+AGG | 0.569110 | 6.3:+14809898 | MS.gene067101:CDS |
| AAACAAGTTTATTAGCGTGA+TGG | 0.570139 | 6.3:-14809496 | None:intergenic |
| CAGTGTGAGACAAATCATGT+TGG | 0.571406 | 6.3:+14811192 | MS.gene067101:intron |
| ATTGCTAATGGGAACAGTCA+AGG | 0.571532 | 6.3:+14809137 | MS.gene067101:CDS |
| AAGATTGACAGAAAGCAAGC+TGG | 0.574839 | 6.3:+14811575 | MS.gene067101:CDS |
| TGACAGAAATGGCTGGAACT+CGG | 0.575576 | 6.3:+14809684 | MS.gene067101:CDS |
| AATAATCAAAAGCTAGGTGG+TGG | 0.577202 | 6.3:+14808067 | MS.gene067101:CDS |
| AATGGTAATCATCTCAGTCC+TGG | 0.577258 | 6.3:+14811234 | MS.gene067101:CDS |
| CGCCGATGCTGAAGAGAAGT+CGG | 0.577797 | 6.3:-14809837 | None:intergenic |
| CGAATGCAAGGCATGAGTCA+AGG | 0.578523 | 6.3:+14809348 | MS.gene067101:CDS |
| AGTCTTGTAGCTAGGTTGAT+GGG | 0.578858 | 6.3:+14809230 | MS.gene067101:CDS |
| AATTCTTGAAGAATCAATGC+AGG | 0.584695 | 6.3:-14810622 | None:intergenic |
| TTGCATCTATCTGCCTTCGT+AGG | 0.585296 | 6.3:-14810256 | None:intergenic |
| GCAACTTCAAGCACTGTGAG+TGG | 0.585693 | 6.3:+14810175 | MS.gene067101:CDS |
| GGCATTGTGACAGAAATGGC+TGG | 0.587128 | 6.3:+14809677 | MS.gene067101:CDS |
| AAGCACCGAGTCTTGTAGCT+AGG | 0.588985 | 6.3:+14809222 | MS.gene067101:CDS |
| GCTACTAAGATCTTGGAACC+TGG | 0.592217 | 6.3:+14809587 | MS.gene067101:CDS |
| AAGCTCAAGGTTGATAGAAG+CGG | 0.592843 | 6.3:+14809565 | MS.gene067101:CDS |
| TTATTCGGAACCTCTTGCAA+TGG | 0.593405 | 6.3:+14811216 | MS.gene067101:CDS |
| GAGATGATTACCATTGCAAG+AGG | 0.593654 | 6.3:-14811226 | None:intergenic |
| AGATGAGACTAACCAGGAGG+AGG | 0.594237 | 6.3:-14808169 | None:intergenic |
| GTGGGAATGTATGGTTGGCA+TGG | 0.594355 | 6.3:+14811917 | MS.gene067101:CDS |
| AATGTCACTAGGAGCAATGA+GGG | 0.595121 | 6.3:+14811642 | MS.gene067101:CDS |
| AAAGGCTCCTTTATGCATGA+AGG | 0.595904 | 6.3:+14811854 | MS.gene067101:CDS |
| TGGTTCTTGGAAATGTCACT+AGG | 0.598922 | 6.3:+14811631 | MS.gene067101:CDS |
| CCTGAACGGTTGAAACATGA+AGG | 0.602964 | 6.3:+14811438 | MS.gene067101:CDS |
| AAAGCCTAAGTGGTCGAACT+CGG | 0.604253 | 6.3:+14810224 | MS.gene067101:CDS |
| TCCTGTGTTAAATGATGCTG+CGG | 0.608805 | 6.3:-14811475 | None:intergenic |
| ATAAAACTCAAACACAAGAA+GGG | 0.612050 | 6.3:+14810080 | MS.gene067101:CDS |
| ATCAACCTAGCTACAAGACT+CGG | 0.612572 | 6.3:-14809227 | None:intergenic |
| AGGAAACCTTCAAGCAGACA+AGG | 0.614022 | 6.3:+14810292 | MS.gene067101:CDS |
| TTATCCGAGTTCGACCACTT+AGG | 0.615870 | 6.3:-14810228 | None:intergenic |
| ATGCAAGAAATGAGAAGCTG+TGG | 0.616016 | 6.3:-14811675 | None:intergenic |
| AAGAACAATTTATAGAGCCA+GGG | 0.617947 | 6.3:-14811407 | None:intergenic |
| AATGTCAAATGTAAAAGAGG+AGG | 0.620342 | 6.3:+14810373 | MS.gene067101:CDS |
| GTTCTTACGACCAACCTGAA+CGG | 0.622153 | 6.3:+14811424 | MS.gene067101:CDS |
| GTCACAATGCCGTTATTGGT+AGG | 0.622935 | 6.3:-14809665 | None:intergenic |
| TGATGGTGAGGAGTCTTTGG+AGG | 0.623700 | 6.3:+14809316 | MS.gene067101:CDS |
| GATTGATTGTGTATATCTTG+TGG | 0.628394 | 6.3:-14809707 | None:intergenic |
| TTCTGATAGTGATGATGGTG+AGG | 0.629680 | 6.3:+14809304 | MS.gene067101:CDS |
| TCCGCAGCATCATTTAACAC+AGG | 0.629948 | 6.3:+14811474 | MS.gene067101:CDS |
| GTCATGGTGTGCATGGACAA+AGG | 0.631811 | 6.3:+14811836 | MS.gene067101:CDS |
| TCGGATAAGATCTCCTACGA+AGG | 0.632427 | 6.3:+14810243 | MS.gene067101:CDS |
| ATTATGGTGTGTTTAAGTCA+TGG | 0.635508 | 6.3:+14811820 | MS.gene067101:CDS |
| ATTGATATCTGTTCTGAATG+CGG | 0.636306 | 6.3:+14810642 | MS.gene067101:CDS |
| AGAGTACATCTCGAAGCTCA+AGG | 0.642881 | 6.3:+14809552 | MS.gene067101:CDS |
| GTTCAATGGCAAATGTCCCA+AGG | 0.650827 | 6.3:+14810693 | MS.gene067101:CDS |
| AAATGTCACTAGGAGCAATG+AGG | 0.653408 | 6.3:+14811641 | MS.gene067101:CDS |
| AAGAATAATCAAAAGCTAGG+TGG | 0.660457 | 6.3:+14808064 | MS.gene067101:CDS |
| GTCACTAGGAGCAATGAGGG+AGG | 0.676197 | 6.3:+14811645 | MS.gene067101:CDS |
| GGTTTGAATCAAAGCCTAAG+TGG | 0.679677 | 6.3:+14810214 | MS.gene067101:CDS |
| TGGTATAGACAAGTCATTAG+GGG | 0.687079 | 6.3:+14809742 | MS.gene067101:CDS |
| AAATACCGATAAGATGAACA+AGG | 0.690927 | 6.3:+14810402 | MS.gene067101:CDS |
| TCATCCTTTAAGCCTCCATG+CGG | 0.694997 | 6.3:-14810031 | None:intergenic |
| TCAGAAGCTTCGGAAAACGG+AGG | 0.698643 | 6.3:+14809373 | MS.gene067101:CDS |
| AGACAAGGTTCTGATGCACA+AGG | 0.700943 | 6.3:+14810307 | MS.gene067101:CDS |
| GATTCATCAAGCAAACCGCA+TGG | 0.702267 | 6.3:+14810016 | MS.gene067101:CDS |
| CTTAAAACATCTTCTCTCAG+GGG | 0.725373 | 6.3:-14810517 | None:intergenic |
| TCATCAAGCAAACCGCATGG+AGG | 0.732965 | 6.3:+14810019 | MS.gene067101:CDS |
| TTGCAACCGATGCTACGCAG+AGG | 0.744918 | 6.3:+14811718 | MS.gene067101:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATAATTTATATTTATT+TGG | + | chr6.3:14809107-14809126 | MS.gene067101:intron | 0.0% |
| !! | ATTTAAGAAAATAATAGAAA+TGG | - | chr6.3:14808494-14808513 | None:intergenic | 10.0% |
| !! | TTTCTTAAATAGATGAATAA+AGG | + | chr6.3:14808504-14808523 | MS.gene067101:intron | 15.0% |
| !!! | CATTGATTATAATGAAAATA+AGG | - | chr6.3:14810830-14810849 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+TGG | + | chr6.3:14810977-14810996 | MS.gene067101:intron | 15.0% |
| !! | AATCAATCATGTTATAATTC+TGG | + | chr6.3:14809722-14809741 | MS.gene067101:CDS | 20.0% |
| !! | ATATGTTGGATATTAGTTAT+GGG | + | chr6.3:14810885-14810904 | MS.gene067101:intron | 20.0% |
| !! | GAATATAATCAATGTATTGA+TGG | - | chr6.3:14810949-14810968 | None:intergenic | 20.0% |
| !! | TTTGCAATATCTTATCAATT+CGG | - | chr6.3:14811536-14811555 | None:intergenic | 20.0% |
| !!! | AAAGAGTTTTTTCTTATACT+CGG | + | chr6.3:14811063-14811082 | MS.gene067101:intron | 20.0% |
| !!! | CAAATTTCAATCATTCTTTT+AGG | + | chr6.3:14809065-14809084 | MS.gene067101:intron | 20.0% |
| !!! | TGCAAAGTTTAAATTCTTTT+TGG | + | chr6.3:14811550-14811569 | MS.gene067101:CDS | 20.0% |
| !!! | TTGTCTAATTGTTATTTCTT+TGG | + | chr6.3:14810747-14810766 | MS.gene067101:intron | 20.0% |
| !!! | TTTTAATTGACATCGTTTTT+TGG | + | chr6.3:14810851-14810870 | MS.gene067101:intron | 20.0% |
| ! | AAAAGCTTTCTTATAGATTG+CGG | + | chr6.3:14808859-14808878 | MS.gene067101:intron | 25.0% |
| ! | AACAGTCTAAATTTCAAACT+CGG | - | chr6.3:14808992-14809011 | None:intergenic | 25.0% |
| ! | AACTAAACCAAGTAATTGAT+TGG | + | chr6.3:14811940-14811959 | MS.gene067101:CDS | 25.0% |
| ! | AAGAAGAATAATCAAAAGCT+AGG | + | chr6.3:14808061-14808080 | MS.gene067101:CDS | 25.0% |
| ! | ACAAATCATGTTGGATTATT+CGG | + | chr6.3:14811201-14811220 | MS.gene067101:CDS | 25.0% |
| ! | ACTAAACCAAGTAATTGATT+GGG | + | chr6.3:14811941-14811960 | MS.gene067101:CDS | 25.0% |
| ! | ATAAAACTCAAACACAAGAA+GGG | + | chr6.3:14810080-14810099 | MS.gene067101:CDS | 25.0% |
| ! | ATCACCTACATTTACTAATA+AGG | - | chr6.3:14810799-14810818 | None:intergenic | 25.0% |
| ! | ATCAGAAAATGAAGATTTCT+TGG | - | chr6.3:14809291-14809310 | None:intergenic | 25.0% |
| ! | CATATGTTGGATATTAGTTA+TGG | + | chr6.3:14810884-14810903 | MS.gene067101:intron | 25.0% |
| ! | CATTTGACATTAGAATTGTT+TGG | - | chr6.3:14810364-14810383 | None:intergenic | 25.0% |
| ! | GAGTATAAGAAAAAACTCTT+TGG | - | chr6.3:14811064-14811083 | None:intergenic | 25.0% |
| ! | GATTCTTTGAACAAGTTTAA+AGG | + | chr6.3:14808743-14808762 | MS.gene067101:CDS | 25.0% |
| ! | TATATATCACCTATGAAACA+CGG | + | chr6.3:14808229-14808248 | MS.gene067101:intron | 25.0% |
| ! | TATCATATGTTCTTACCAAA+TGG | - | chr6.3:14808796-14808815 | None:intergenic | 25.0% |
| ! | TATCCCTTATTAGTAAATGT+AGG | + | chr6.3:14810792-14810811 | MS.gene067101:intron | 25.0% |
| ! | TATGTTGGATATTAGTTATG+GGG | + | chr6.3:14810886-14810905 | MS.gene067101:intron | 25.0% |
| ! | TCACCTACATTTACTAATAA+GGG | - | chr6.3:14810798-14810817 | None:intergenic | 25.0% |
| ! | TCTAATGTCAAATGTAAAAG+AGG | + | chr6.3:14810370-14810389 | MS.gene067101:CDS | 25.0% |
| ! | TTTAATCGAAACCAACTTAA+GGG | + | chr6.3:14811744-14811763 | MS.gene067101:CDS | 25.0% |
| ! | TTTCAAATGCGAAAAAAAGT+GGG | + | chr6.3:14809162-14809181 | MS.gene067101:CDS | 25.0% |
| !! | ATATCCAACATATGATTTGT+AGG | - | chr6.3:14810878-14810897 | None:intergenic | 25.0% |
| !! | CAAAAAGTGATAATGAGATT+AGG | + | chr6.3:14810470-14810489 | MS.gene067101:CDS | 25.0% |
| !! | GTGAAAACATTTGAAACAAT+AGG | - | chr6.3:14809818-14809837 | None:intergenic | 25.0% |
| !! | TAAACACACCATAATAGTTT+TGG | - | chr6.3:14811815-14811834 | None:intergenic | 25.0% |
| !! | TTCAGTGTAATTTTATGTGT+TGG | + | chr6.3:14808307-14808326 | MS.gene067101:intron | 25.0% |
| !! | TTGAAGATCTTGTAGATTTT+AGG | + | chr6.3:14812069-14812088 | MS.gene067101:CDS | 25.0% |
| !! | TTTTAATCGAAACCAACTTA+AGG | + | chr6.3:14811743-14811762 | MS.gene067101:CDS | 25.0% |
| !! | TTTTCAAATGCGAAAAAAAG+TGG | + | chr6.3:14809161-14809180 | MS.gene067101:CDS | 25.0% |
| !!! | AATATCGCCGTTTTTAAAAA+TGG | + | chr6.3:14808634-14808653 | MS.gene067101:intron | 25.0% |
| !!! | ACAATGGCCATTTTTAAAAA+CGG | - | chr6.3:14808644-14808663 | None:intergenic | 25.0% |
| !!! | TGTTTGAGTTTTATGTTTGA+AGG | - | chr6.3:14810074-14810093 | None:intergenic | 25.0% |
| !!! | TTTTATTTAAGCTTGTGCTT+TGG | + | chr6.3:14811117-14811136 | MS.gene067101:intron | 25.0% |
| AAACAAGTTTATTAGCGTGA+TGG | - | chr6.3:14809499-14809518 | None:intergenic | 30.0% | |
| AAATACCGATAAGATGAACA+AGG | + | chr6.3:14810402-14810421 | MS.gene067101:CDS | 30.0% | |
| AACAGAAGCTGAAAGAATTA+AGG | + | chr6.3:14810551-14810570 | MS.gene067101:CDS | 30.0% | |
| AACTAAAAGTAGATGCAGAA+GGG | - | chr6.3:14810773-14810792 | None:intergenic | 30.0% | |
| AAGAACAATTTATAGAGCCA+GGG | - | chr6.3:14811410-14811429 | None:intergenic | 30.0% | |
| AAGAATAATCAAAAGCTAGG+TGG | + | chr6.3:14808064-14808083 | MS.gene067101:CDS | 30.0% | |
| AATGTCAAATGTAAAAGAGG+AGG | + | chr6.3:14810373-14810392 | MS.gene067101:CDS | 30.0% | |
| AATTACCATTGGATTGTGAT+CGG | + | chr6.3:14808920-14808939 | MS.gene067101:intron | 30.0% | |
| AATTCTTGAAGAATCAATGC+AGG | - | chr6.3:14810625-14810644 | None:intergenic | 30.0% | |
| AATTGCTGCCAAAACTATTA+TGG | + | chr6.3:14811804-14811823 | MS.gene067101:CDS | 30.0% | |
| ACTTAAAACATCTTCTCTCA+GGG | - | chr6.3:14810521-14810540 | None:intergenic | 30.0% | |
| AGTGGAAATAAAGACTTTGT+CGG | + | chr6.3:14810193-14810212 | MS.gene067101:CDS | 30.0% | |
| AGTTATCTTCATTGCTGAAT+TGG | + | chr6.3:14811611-14811630 | MS.gene067101:CDS | 30.0% | |
| ATAGAAAGAGAAAATGCACA+TGG | - | chr6.3:14810726-14810745 | None:intergenic | 30.0% | |
| ATCAAAGACATTAAAACGAG+AGG | - | chr6.3:14811357-14811376 | None:intergenic | 30.0% | |
| ATCAATTCGGTAAACAAGTT+TGG | - | chr6.3:14811523-14811542 | None:intergenic | 30.0% | |
| ATTAAGGTCTAGAGAAAATG+AGG | + | chr6.3:14810567-14810586 | MS.gene067101:CDS | 30.0% | |
| ATTATGGTGTGTTTAAGTCA+TGG | + | chr6.3:14811820-14811839 | MS.gene067101:CDS | 30.0% | |
| CATAAAACTCAAACACAAGA+AGG | + | chr6.3:14810079-14810098 | MS.gene067101:CDS | 30.0% | |
| GATGCAAATTTGATCTAGAA+AGG | + | chr6.3:14810272-14810291 | MS.gene067101:CDS | 30.0% | |
| GATTGATTGTGTATATCTTG+TGG | - | chr6.3:14809710-14809729 | None:intergenic | 30.0% | |
| TAACTAAAAGTAGATGCAGA+AGG | - | chr6.3:14810774-14810793 | None:intergenic | 30.0% | |
| TAAGAACAATTTATAGAGCC+AGG | - | chr6.3:14811411-14811430 | None:intergenic | 30.0% | |
| TAAGAGTGAGATTAAGAAGT+GGG | + | chr6.3:14811899-14811918 | MS.gene067101:CDS | 30.0% | |
| TACTACCTTGTTCATCTTAT+CGG | - | chr6.3:14810410-14810429 | None:intergenic | 30.0% | |
| TCATTTAACACAGGAAAGAT+AGG | + | chr6.3:14811483-14811502 | MS.gene067101:CDS | 30.0% | |
| TGATCTTCAATTTGATTCCA+GGG | + | chr6.3:14811373-14811392 | MS.gene067101:intron | 30.0% | |
| TTAAGAGTGAGATTAAGAAG+TGG | + | chr6.3:14811898-14811917 | MS.gene067101:CDS | 30.0% | |
| TTGATCTTCAATTTGATTCC+AGG | + | chr6.3:14811372-14811391 | MS.gene067101:intron | 30.0% | |
| TTGGATTGTAGATTGCTAAT+GGG | + | chr6.3:14809126-14809145 | MS.gene067101:intron | 30.0% | |
| TTTGGATTGTAGATTGCTAA+TGG | + | chr6.3:14809125-14809144 | MS.gene067101:intron | 30.0% | |
| ! | AACTACATCATTTTCATGAG+AGG | - | chr6.3:14809885-14809904 | None:intergenic | 30.0% |
| ! | ACTACATCATTTTCATGAGA+GGG | - | chr6.3:14809884-14809903 | None:intergenic | 30.0% |
| ! | ATTGATATCTGTTCTGAATG+CGG | + | chr6.3:14810642-14810661 | MS.gene067101:CDS | 30.0% |
| ! | GAACATATGATAGTTTGTGT+TGG | + | chr6.3:14808804-14808823 | MS.gene067101:intron | 30.0% |
| ! | GATTTATCTCTCTTTGAAGA+TGG | - | chr6.3:14809269-14809288 | None:intergenic | 30.0% |
| ! | TAGTTCACCTCTAAAGAAAA+AGG | + | chr6.3:14810441-14810460 | MS.gene067101:CDS | 30.0% |
| ! | TGAAGATGTGCTTCAAATTT+TGG | + | chr6.3:14812034-14812053 | MS.gene067101:CDS | 30.0% |
| ! | TGATTTTCTCAGATTATCAG+TGG | - | chr6.3:14808282-14808301 | None:intergenic | 30.0% |
| ! | TTTCTTTAGAGGTGAACTAA+AGG | - | chr6.3:14810440-14810459 | None:intergenic | 30.0% |
| ! | TTTTCTCTCAGCTATTTGAT+TGG | + | chr6.3:14808101-14808120 | MS.gene067101:CDS | 30.0% |
| !! | TCATTTTCTGATAGTGATGA+TGG | + | chr6.3:14809299-14809318 | MS.gene067101:CDS | 30.0% |
| !! | TCTTTAGCATTGATACATCT+TGG | - | chr6.3:14808556-14808575 | None:intergenic | 30.0% |
| AAGATCATAGCTCATGTTGA+TGG | + | chr6.3:14809923-14809942 | MS.gene067101:CDS | 35.0% | |
| AATAATCAAAAGCTAGGTGG+TGG | + | chr6.3:14808067-14808086 | MS.gene067101:CDS | 35.0% | |
| ACAAATTCCACGTATTCACA+CGG | + | chr6.3:14808887-14808906 | MS.gene067101:intron | 35.0% | |
| ATGTTCTTACCAAATGGAGT+TGG | - | chr6.3:14808790-14808809 | None:intergenic | 35.0% | |
| ATTTAAGCTTGTGCTTTGGT+TGG | + | chr6.3:14811121-14811140 | MS.gene067101:intron | 35.0% | |
| CAAACAGAAATCCCTTAAGT+TGG | - | chr6.3:14811758-14811777 | None:intergenic | 35.0% | |
| CACAAGAAGAATCAGAACAA+TGG | - | chr6.3:14808660-14808679 | None:intergenic | 35.0% | |
| CACTTAAAACATCTTCTCTC+AGG | - | chr6.3:14810522-14810541 | None:intergenic | 35.0% | |
| CATTGTTCTGATTCTTCTTG+TGG | + | chr6.3:14808658-14808677 | MS.gene067101:intron | 35.0% | |
| CGATTGAGAGAGTTGTAAAA+TGG | + | chr6.3:14808606-14808625 | MS.gene067101:intron | 35.0% | |
| CTGGTATAGACAAGTCATTA+GGG | + | chr6.3:14809741-14809760 | MS.gene067101:CDS | 35.0% | |
| CTTAAAACATCTTCTCTCAG+GGG | - | chr6.3:14810520-14810539 | None:intergenic | 35.0% | |
| GACATTTGCCATTGAACATT+TGG | - | chr6.3:14810690-14810709 | None:intergenic | 35.0% | |
| GATTAAGAAGTGGGAATGTA+TGG | + | chr6.3:14811908-14811927 | MS.gene067101:CDS | 35.0% | |
| GGAAGATGCAAGAAAACATT+TGG | - | chr6.3:14809633-14809652 | None:intergenic | 35.0% | |
| GTCACCTCAATATCTAATGA+GGG | - | chr6.3:14808446-14808465 | None:intergenic | 35.0% | |
| GTCAGTATTAATGACGTGAT+TGG | + | chr6.3:14811009-14811028 | MS.gene067101:intron | 35.0% | |
| TCATCTCCCAATCAATTACT+TGG | - | chr6.3:14811950-14811969 | None:intergenic | 35.0% | |
| TCCAATGACCAAATGTTCAA+TGG | + | chr6.3:14810679-14810698 | MS.gene067101:CDS | 35.0% | |
| TCTGGTATAGACAAGTCATT+AGG | + | chr6.3:14809740-14809759 | MS.gene067101:CDS | 35.0% | |
| TGCAAGCACATATATTCTTC+TGG | - | chr6.3:14809990-14810009 | None:intergenic | 35.0% | |
| TGGTATAGACAAGTCATTAG+GGG | + | chr6.3:14809742-14809761 | MS.gene067101:CDS | 35.0% | |
| TGGTCCTACAAATCATATGT+TGG | + | chr6.3:14810871-14810890 | MS.gene067101:intron | 35.0% | |
| TGTATTAGATGAGACTAACC+AGG | - | chr6.3:14808178-14808197 | None:intergenic | 35.0% | |
| TGTCACCTCAATATCTAATG+AGG | - | chr6.3:14808447-14808466 | None:intergenic | 35.0% | |
| TGTTCTTACCAAATGGAGTT+GGG | - | chr6.3:14808789-14808808 | None:intergenic | 35.0% | |
| TTCATAGTATCACACACTTG+AGG | + | chr6.3:14808402-14808421 | MS.gene067101:intron | 35.0% | |
| TTTGGAAACTGATGAGTGTT+TGG | + | chr6.3:14808683-14808702 | MS.gene067101:intron | 35.0% | |
| TTTGGTCATTGGAACATGTT+TGG | - | chr6.3:14810672-14810691 | None:intergenic | 35.0% | |
| ! | ATCAATGCAGGTGATCTTTT+AGG | - | chr6.3:14810613-14810632 | None:intergenic | 35.0% |
| ! | ATTGGTAGGACACTTTGAAA+TGG | - | chr6.3:14809654-14809673 | None:intergenic | 35.0% |
| ! | CACATATATTCTTCTGGAAG+TGG | - | chr6.3:14809984-14810003 | None:intergenic | 35.0% |
| ! | CTGATTCTTCTTGTGGATTT+TGG | + | chr6.3:14808665-14808684 | MS.gene067101:intron | 35.0% |
| ! | GATCTTGTAGATTTTAGGCA+TGG | + | chr6.3:14812074-14812093 | MS.gene067101:CDS | 35.0% |
| ! | GGTCTGAATCAAGTTTTCTT+TGG | + | chr6.3:14808825-14808844 | MS.gene067101:intron | 35.0% |
| ! | GTCTCTTCCTTTTTCTTTAG+AGG | - | chr6.3:14810451-14810470 | None:intergenic | 35.0% |
| ! | TCAAAGTGTCCTACCAATAA+CGG | + | chr6.3:14809656-14809675 | MS.gene067101:CDS | 35.0% |
| ! | TCAATGTATTGATGGCATGT+CGG | - | chr6.3:14810941-14810960 | None:intergenic | 35.0% |
| ! | TTCATTGCTGAATTGGTTCT+TGG | + | chr6.3:14811618-14811637 | MS.gene067101:CDS | 35.0% |
| AAAAAACTTCTTCCTCCTCC+TGG | + | chr6.3:14808157-14808176 | MS.gene067101:CDS | 40.0% | |
| AAAATTCCTCTGCGTAGCAT+CGG | - | chr6.3:14811727-14811746 | None:intergenic | 40.0% | |
| AAAGGCTCCTTTATGCATGA+AGG | + | chr6.3:14811854-14811873 | MS.gene067101:CDS | 40.0% | |
| AAATGTCACTAGGAGCAATG+AGG | + | chr6.3:14811641-14811660 | MS.gene067101:CDS | 40.0% | |
| AAGAAGTGGGAATGTATGGT+TGG | + | chr6.3:14811912-14811931 | MS.gene067101:CDS | 40.0% | |
| AAGAGTCCGAGAATTTCTTC+GGG | + | chr6.3:14809527-14809546 | MS.gene067101:CDS | 40.0% | |
| AAGATTGACAGAAAGCAAGC+TGG | + | chr6.3:14811575-14811594 | MS.gene067101:CDS | 40.0% | |
| AATGGTAATCATCTCAGTCC+TGG | + | chr6.3:14811234-14811253 | MS.gene067101:CDS | 40.0% | |
| AATGTCACTAGGAGCAATGA+GGG | + | chr6.3:14811642-14811661 | MS.gene067101:CDS | 40.0% | |
| ACCAAATGGAGTTGGGAATT+AGG | - | chr6.3:14808782-14808801 | None:intergenic | 40.0% | |
| AGAAGAGCAGTAACTAGGTT+TGG | + | chr6.3:14809404-14809423 | MS.gene067101:CDS | 40.0% | |
| AGAGGTGAACTAAAGGTAGA+TGG | - | chr6.3:14810433-14810452 | None:intergenic | 40.0% | |
| AGCTTTCTTATAGATTGCGG+CGG | + | chr6.3:14808862-14808881 | MS.gene067101:intron | 40.0% | |
| ATCAACCTAGCTACAAGACT+CGG | - | chr6.3:14809230-14809249 | None:intergenic | 40.0% | |
| ATCGAGACTACTGGAAGAAA+AGG | - | chr6.3:14811277-14811296 | None:intergenic | 40.0% | |
| ATCTCAGCCTTCATGCATAA+AGG | - | chr6.3:14811864-14811883 | None:intergenic | 40.0% | |
| ATGAAACACGGATACGGATA+TGG | + | chr6.3:14808241-14808260 | MS.gene067101:intron | 40.0% | |
| ATGCAAGAAATGAGAAGCTG+TGG | - | chr6.3:14811678-14811697 | None:intergenic | 40.0% | |
| ATTAGATGAGACTAACCAGG+AGG | - | chr6.3:14808175-14808194 | None:intergenic | 40.0% | |
| ATTGCTAATGGGAACAGTCA+AGG | + | chr6.3:14809137-14809156 | MS.gene067101:CDS | 40.0% | |
| CACTGATATGCGTAGAAACA+AGG | - | chr6.3:14811177-14811196 | None:intergenic | 40.0% | |
| CAGTGTGAGACAAATCATGT+TGG | + | chr6.3:14811192-14811211 | MS.gene067101:intron | 40.0% | |
| CCAGACATGCTTTCAATCTA+AGG | - | chr6.3:14810915-14810934 | None:intergenic | 40.0% | |
| CTCTTTCCCGAAGAAATTCT+CGG | - | chr6.3:14809536-14809555 | None:intergenic | 40.0% | |
| CTGATGCACAAGGAGAAAAA+AGG | + | chr6.3:14810317-14810336 | MS.gene067101:CDS | 40.0% | |
| GAAATTCTCGGACTCTTCAA+AGG | - | chr6.3:14809524-14809543 | None:intergenic | 40.0% | |
| GAAGAGTCCGAGAATTTCTT+CGG | + | chr6.3:14809526-14809545 | MS.gene067101:CDS | 40.0% | |
| GACTGTTTGAACTTGACCTA+TGG | + | chr6.3:14809005-14809024 | MS.gene067101:intron | 40.0% | |
| GAGATGATTACCATTGCAAG+AGG | - | chr6.3:14811229-14811248 | None:intergenic | 40.0% | |
| GAGCATACATGCAAAAACTG+CGG | + | chr6.3:14809764-14809783 | MS.gene067101:CDS | 40.0% | |
| GATGCCCTCATTAGATATTG+AGG | + | chr6.3:14808439-14808458 | MS.gene067101:intron | 40.0% | |
| GCCATTGAACATTTGGTCAT+TGG | - | chr6.3:14810683-14810702 | None:intergenic | 40.0% | |
| GGTTTGAATCAAAGCCTAAG+TGG | + | chr6.3:14810214-14810233 | MS.gene067101:CDS | 40.0% | |
| GTCAGCACTTCAATTACCAT+TGG | + | chr6.3:14808909-14808928 | MS.gene067101:intron | 40.0% | |
| GTCTAGAGAAAATGAGGAGT+TGG | + | chr6.3:14810573-14810592 | MS.gene067101:CDS | 40.0% | |
| TAACGGCATTGTGACAGAAA+TGG | + | chr6.3:14809673-14809692 | MS.gene067101:CDS | 40.0% | |
| TAGTATCACACACTTGAGGT+TGG | + | chr6.3:14808406-14808425 | MS.gene067101:intron | 40.0% | |
| TATCCGTATCCGTGTTTCAT+AGG | - | chr6.3:14808241-14808260 | None:intergenic | 40.0% | |
| TCACCTATGAAACACGGATA+CGG | + | chr6.3:14808235-14808254 | MS.gene067101:intron | 40.0% | |
| TCCTGTGTTAAATGATGCTG+CGG | - | chr6.3:14811478-14811497 | None:intergenic | 40.0% | |
| TGAGTCACTCATTGGGAAAA+TGG | + | chr6.3:14811967-14811986 | MS.gene067101:CDS | 40.0% | |
| TGGTTCTTGGAAATGTCACT+AGG | + | chr6.3:14811631-14811650 | MS.gene067101:CDS | 40.0% | |
| TGTTTAAGTCATGGTGTGCA+TGG | + | chr6.3:14811829-14811848 | MS.gene067101:CDS | 40.0% | |
| TTATTCGGAACCTCTTGCAA+TGG | + | chr6.3:14811216-14811235 | MS.gene067101:CDS | 40.0% | |
| TTCTGTCACAATGCCGTTAT+TGG | - | chr6.3:14809672-14809691 | None:intergenic | 40.0% | |
| ! | AGTGATGATGCTAGTGTGAA+TGG | + | chr6.3:14808013-14808032 | MS.gene067101:CDS | 40.0% |
| ! | ATGCATGAAGGCTGAGATTT+TGG | + | chr6.3:14811866-14811885 | MS.gene067101:CDS | 40.0% |
| ! | CCTTAGATTGAAAGCATGTC+TGG | + | chr6.3:14810912-14810931 | MS.gene067101:intron | 40.0% |
| ! | GAAAATGAGGAGTTGGTTAC+TGG | + | chr6.3:14810580-14810599 | MS.gene067101:CDS | 40.0% |
| ! | GTGTTTTGTCACAAGTGAGA+AGG | + | chr6.3:14809450-14809469 | MS.gene067101:CDS | 40.0% |
| !! | AAGCTCAAGGTTGATAGAAG+CGG | + | chr6.3:14809565-14809584 | MS.gene067101:CDS | 40.0% |
| !! | ACTTGAGGTTGGTAGTGTAA+AGG | + | chr6.3:14808417-14808436 | MS.gene067101:intron | 40.0% |
| !! | AGTCTTGTAGCTAGGTTGAT+GGG | + | chr6.3:14809230-14809249 | MS.gene067101:CDS | 40.0% |
| !! | TTCTGATAGTGATGATGGTG+AGG | + | chr6.3:14809304-14809323 | MS.gene067101:CDS | 40.0% |
| !!! | AGGAGGAGGAAGAAGTTTTT+TGG | - | chr6.3:14808158-14808177 | None:intergenic | 40.0% |
| AAAGCCTAAGTGGTCGAACT+CGG | + | chr6.3:14810224-14810243 | MS.gene067101:CDS | 45.0% | |
| AATGGCAAATGTCCCAAGGT+TGG | + | chr6.3:14810697-14810716 | MS.gene067101:intron | 45.0% | |
| ACGAGAGAAGAGCAGTAACT+AGG | + | chr6.3:14809399-14809418 | MS.gene067101:CDS | 45.0% | |
| ACTGTCCGATCACAATCCAA+TGG | - | chr6.3:14808928-14808947 | None:intergenic | 45.0% | |
| AGAAGCGGCTACTAAGATCT+TGG | + | chr6.3:14809580-14809599 | MS.gene067101:CDS | 45.0% | |
| AGAGTACATCTCGAAGCTCA+AGG | + | chr6.3:14809552-14809571 | MS.gene067101:CDS | 45.0% | |
| AGGAAACCTTCAAGCAGACA+AGG | + | chr6.3:14810292-14810311 | MS.gene067101:CDS | 45.0% | |
| ATGCACATGGAAACCAACCT+TGG | - | chr6.3:14810713-14810732 | None:intergenic | 45.0% | |
| CATGAGCTATGATCTTCTCC+TGG | - | chr6.3:14809919-14809938 | None:intergenic | 45.0% | |
| CATGGAGGCTTAAAGGATGA+TGG | + | chr6.3:14810034-14810053 | MS.gene067101:CDS | 45.0% | |
| CATGTTTCAACCGTTCAGGT+TGG | - | chr6.3:14811437-14811456 | None:intergenic | 45.0% | |
| CCTCAGATTTGACGTGTTCT+GGG | - | chr6.3:14808371-14808390 | None:intergenic | 45.0% | |
| CCTGAACGGTTGAAACATGA+AGG | + | chr6.3:14811438-14811457 | MS.gene067101:CDS | 45.0% | |
| CCTTCATGTTTCAACCGTTC+AGG | - | chr6.3:14811441-14811460 | None:intergenic | 45.0% | |
| CTCAGATTTGACGTGTTCTG+GGG | - | chr6.3:14808370-14808389 | None:intergenic | 45.0% | |
| GATTCATCAAGCAAACCGCA+TGG | + | chr6.3:14810016-14810035 | MS.gene067101:CDS | 45.0% | |
| GCCTAATTCCCAACTCCATT+TGG | + | chr6.3:14808778-14808797 | MS.gene067101:CDS | 45.0% | |
| GCTACTAAGATCTTGGAACC+TGG | + | chr6.3:14809587-14809606 | MS.gene067101:CDS | 45.0% | |
| GTCACAATGCCGTTATTGGT+AGG | - | chr6.3:14809668-14809687 | None:intergenic | 45.0% | |
| GTTCAATGGCAAATGTCCCA+AGG | + | chr6.3:14810693-14810712 | MS.gene067101:CDS | 45.0% | |
| GTTCTTACGACCAACCTGAA+CGG | + | chr6.3:14811424-14811443 | MS.gene067101:CDS | 45.0% | |
| TCAGAACCTTGTCTGCTTGA+AGG | - | chr6.3:14810301-14810320 | None:intergenic | 45.0% | |
| TCATCCTTTAAGCCTCCATG+CGG | - | chr6.3:14810034-14810053 | None:intergenic | 45.0% | |
| TCCGCAGCATCATTTAACAC+AGG | + | chr6.3:14811474-14811493 | MS.gene067101:CDS | 45.0% | |
| TCCTCAGATTTGACGTGTTC+TGG | - | chr6.3:14808372-14808391 | None:intergenic | 45.0% | |
| TCGGATAAGATCTCCTACGA+AGG | + | chr6.3:14810243-14810262 | MS.gene067101:CDS | 45.0% | |
| TCTTCCAGTAGTCTCGATGA+AGG | + | chr6.3:14811279-14811298 | MS.gene067101:CDS | 45.0% | |
| TGACAGAAATGGCTGGAACT+CGG | + | chr6.3:14809684-14809703 | MS.gene067101:CDS | 45.0% | |
| TGCACATGGAAACCAACCTT+GGG | - | chr6.3:14810712-14810731 | None:intergenic | 45.0% | |
| TGGGAGATGAGTCACTCATT+GGG | + | chr6.3:14811960-14811979 | MS.gene067101:CDS | 45.0% | |
| TGTAGTTCTTCTCAGAAGCC+AGG | + | chr6.3:14809898-14809917 | MS.gene067101:CDS | 45.0% | |
| TTATCCGAGTTCGACCACTT+AGG | - | chr6.3:14810231-14810250 | None:intergenic | 45.0% | |
| TTGCATCTATCTGCCTTCGT+AGG | - | chr6.3:14810259-14810278 | None:intergenic | 45.0% | |
| TTGGGAGATGAGTCACTCAT+TGG | + | chr6.3:14811959-14811978 | MS.gene067101:CDS | 45.0% | |
| ! | AAGCTAGGTGGTGGTTGTAT+TGG | + | chr6.3:14808076-14808095 | MS.gene067101:CDS | 45.0% |
| ! | AGACAAGGTTCTGATGCACA+AGG | + | chr6.3:14810307-14810326 | MS.gene067101:CDS | 45.0% |
| ! | GAGTCTTGTAGCTAGGTTGA+TGG | + | chr6.3:14809229-14809248 | MS.gene067101:CDS | 45.0% |
| !! | CAGCATCGGCGAAAAACAAA+AGG | + | chr6.3:14809849-14809868 | MS.gene067101:CDS | 45.0% |
| !! | TAAGCTATGAAGCACCGACA+CGG | - | chr6.3:14811038-14811057 | None:intergenic | 45.0% |
| !! | TGATGATGGTGAGGAGTCTT+TGG | + | chr6.3:14809313-14809332 | MS.gene067101:CDS | 45.0% |
| !! | TTTGAGGCGGGTGTTGATAT+TGG | + | chr6.3:14812011-14812030 | MS.gene067101:CDS | 45.0% |
| !!! | GGCTGAGATTTTGGTTCAAG+AGG | + | chr6.3:14811875-14811894 | MS.gene067101:CDS | 45.0% |
| AGATGAGACTAACCAGGAGG+AGG | - | chr6.3:14808172-14808191 | None:intergenic | 50.0% | |
| AGGTCAAAGCTGCGAATGCA+AGG | + | chr6.3:14809336-14809355 | MS.gene067101:CDS | 50.0% | |
| AGTAGTCTCGATGAAGGCTC+AGG | + | chr6.3:14811285-14811304 | MS.gene067101:CDS | 50.0% | |
| AGTCAAGGCCTCAGAAGCTT+CGG | + | chr6.3:14809363-14809382 | MS.gene067101:CDS | 50.0% | |
| CAAACCGCATGGAGGCTTAA+AGG | + | chr6.3:14810027-14810046 | MS.gene067101:CDS | 50.0% | |
| CCCAGAACACGTCAAATCTG+AGG | + | chr6.3:14808368-14808387 | MS.gene067101:intron | 50.0% | |
| CGAATGCAAGGCATGAGTCA+AGG | + | chr6.3:14809348-14809367 | MS.gene067101:CDS | 50.0% | |
| CTGTTTGTAGCCTGCAAACC+AGG | - | chr6.3:14809608-14809627 | None:intergenic | 50.0% | |
| GAAGCTTCCAAGACTGATCC+AGG | - | chr6.3:14811255-14811274 | None:intergenic | 50.0% | |
| GCCTCAGAAGCTTCGGAAAA+CGG | + | chr6.3:14809370-14809389 | MS.gene067101:CDS | 50.0% | |
| GGCATTGTGACAGAAATGGC+TGG | + | chr6.3:14809677-14809696 | MS.gene067101:CDS | 50.0% | |
| GTCAGCACATCAGAAGCCAT+AGG | - | chr6.3:14809024-14809043 | None:intergenic | 50.0% | |
| GTCATGGTGTGCATGGACAA+AGG | + | chr6.3:14811836-14811855 | MS.gene067101:CDS | 50.0% | |
| GTGGGAATGTATGGTTGGCA+TGG | + | chr6.3:14811917-14811936 | MS.gene067101:CDS | 50.0% | |
| TCAGAAGCTTCGGAAAACGG+AGG | + | chr6.3:14809373-14809392 | MS.gene067101:CDS | 50.0% | |
| TCAGGGGTCGATGATGTCTT+TGG | - | chr6.3:14810504-14810523 | None:intergenic | 50.0% | |
| TCATCAAGCAAACCGCATGG+AGG | + | chr6.3:14810019-14810038 | MS.gene067101:CDS | 50.0% | |
| TCTCAGTCCTGGATCAGTCT+TGG | + | chr6.3:14811245-14811264 | MS.gene067101:CDS | 50.0% | |
| TGAGCCTTCATCGAGACTAC+TGG | - | chr6.3:14811286-14811305 | None:intergenic | 50.0% | |
| ! | GATCTTGGAACCTGGTTTGC+AGG | + | chr6.3:14809595-14809614 | MS.gene067101:CDS | 50.0% |
| ! | GCAACTTCAAGCACTGTGAG+TGG | + | chr6.3:14810175-14810194 | MS.gene067101:CDS | 50.0% |
| ! | TCCGTTTTCCGAAGCTTCTG+AGG | - | chr6.3:14809374-14809393 | None:intergenic | 50.0% |
| ! | TGATGGTGAGGAGTCTTTGG+AGG | + | chr6.3:14809316-14809335 | MS.gene067101:CDS | 50.0% |
| !! | AAGCACCGAGTCTTGTAGCT+AGG | + | chr6.3:14809222-14809241 | MS.gene067101:CDS | 50.0% |
| !! | CACCGACTTCTCTTCAGCAT+CGG | + | chr6.3:14809835-14809854 | MS.gene067101:CDS | 50.0% |
| CCAGGGTGAAAACAAAGCCC+TGG | - | chr6.3:14811393-14811412 | None:intergenic | 55.0% | |
| CGCCGATGCTGAAGAGAAGT+CGG | - | chr6.3:14809840-14809859 | None:intergenic | 55.0% | |
| GTCACTAGGAGCAATGAGGG+AGG | + | chr6.3:14811645-14811664 | MS.gene067101:CDS | 55.0% | |
| TTGCAACCGATGCTACGCAG+AGG | + | chr6.3:14811718-14811737 | MS.gene067101:CDS | 55.0% | |
| ! | GACGTGATTGGTGTCCGTGT+CGG | + | chr6.3:14811021-14811040 | MS.gene067101:intron | 55.0% |
| ! | GTGCTGACCGTGTGAATACG+TGG | - | chr6.3:14808897-14808916 | None:intergenic | 55.0% |
| !! | GTGTTGGTGTCGTGTCGTGT+CGG | + | chr6.3:14808323-14808342 | MS.gene067101:intron | 55.0% |
| !!! | CCAGGGCTTTGTTTTCACCC+TGG | + | chr6.3:14811390-14811409 | MS.gene067101:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 14808010 | 14812106 | 14808010 | ID=MS.gene067101 |
| chr6.3 | mRNA | 14808010 | 14812106 | 14808010 | ID=MS.gene067101.t1;Parent=MS.gene067101 |
| chr6.3 | exon | 14808010 | 14808178 | 14808010 | ID=MS.gene067101.t1.exon1;Parent=MS.gene067101.t1 |
| chr6.3 | CDS | 14808010 | 14808178 | 14808010 | ID=cds.MS.gene067101.t1;Parent=MS.gene067101.t1 |
| chr6.3 | exon | 14808729 | 14808799 | 14808729 | ID=MS.gene067101.t1.exon2;Parent=MS.gene067101.t1 |
| chr6.3 | CDS | 14808729 | 14808799 | 14808729 | ID=cds.MS.gene067101.t1;Parent=MS.gene067101.t1 |
| chr6.3 | exon | 14809137 | 14810714 | 14809137 | ID=MS.gene067101.t1.exon3;Parent=MS.gene067101.t1 |
| chr6.3 | CDS | 14809137 | 14810714 | 14809137 | ID=cds.MS.gene067101.t1;Parent=MS.gene067101.t1 |
| chr6.3 | exon | 14811195 | 14811306 | 14811195 | ID=MS.gene067101.t1.exon4;Parent=MS.gene067101.t1 |
| chr6.3 | CDS | 14811195 | 14811306 | 14811195 | ID=cds.MS.gene067101.t1;Parent=MS.gene067101.t1 |
| chr6.3 | exon | 14811394 | 14812106 | 14811394 | ID=MS.gene067101.t1.exon5;Parent=MS.gene067101.t1 |
| chr6.3 | CDS | 14811394 | 14812106 | 14811394 | ID=cds.MS.gene067101.t1;Parent=MS.gene067101.t1 |
| Gene Sequence |
| Protein sequence |
