Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068341.t1 | XP_013444632.1 | 97.3 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 1.10E-97 | 365.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068341.t1 | Q5ZI57 | 55.8 | 163 | 72 | 0 | 19 | 181 | 14 | 176 | 3.3e-50 | 199.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068341.t1 | G8A2X1 | 97.3 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 7.9e-98 | 365.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene068341 | MS.gene98171 | PPI |
| MS.gene068341 | MS.gene024701 | PPI |
| MS.gene068341 | MS.gene22289 | PPI |
| MS.gene92142 | MS.gene068341 | PPI |
| MS.gene068341 | MS.gene04771 | PPI |
| MS.gene068341 | MS.gene21679 | PPI |
| MS.gene068341 | MS.gene015741 | PPI |
| MS.gene068341 | MS.gene21951 | PPI |
| MS.gene068341 | MS.gene59609 | PPI |
| MS.gene068341 | MS.gene05927 | PPI |
| MS.gene068341 | MS.gene79721 | PPI |
| MS.gene068341 | MS.gene049131 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068341.t1 | MTR_8g027700 | 97.312 | 186 | 5 | 0 | 1 | 186 | 1 | 186 | 3.23e-134 | 373 |
| MS.gene068341.t1 | MTR_4g081170 | 92.473 | 186 | 14 | 0 | 1 | 186 | 1 | 186 | 4.02e-127 | 355 |
| MS.gene068341.t1 | MTR_8g027700 | 96.296 | 135 | 5 | 0 | 52 | 186 | 1 | 135 | 2.56e-94 | 270 |
| MS.gene068341.t1 | MTR_4g027400 | 87.234 | 47 | 6 | 0 | 1 | 47 | 1 | 47 | 5.77e-23 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068341.t1 | AT5G54750 | 84.946 | 186 | 28 | 0 | 1 | 186 | 1 | 186 | 1.64e-118 | 333 |
| MS.gene068341.t1 | AT5G54750 | 79.397 | 199 | 28 | 1 | 1 | 186 | 1 | 199 | 1.53e-114 | 324 |
Find 35 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTACTCATCATCCTTATA+TGG | 0.260125 | 8.3:+66421255 | None:intergenic |
| TCCTTATATGGATACTCTTC+TGG | 0.287013 | 8.3:+66421267 | None:intergenic |
| GACATGTTGTTGTATTGTTT+TGG | 0.317631 | 8.3:-66422038 | MS.gene068341:CDS |
| TCGCCAGATCGAGGAGCAAC+AGG | 0.350787 | 8.3:+66424291 | None:intergenic |
| GCCCCTGTTGCTCCTCGATC+TGG | 0.370275 | 8.3:-66424294 | MS.gene068341:CDS |
| TCCAGAAGAGTATCCATATA+AGG | 0.373933 | 8.3:-66421268 | MS.gene068341:CDS |
| ACAGAAACTTACCATATCTA+AGG | 0.380693 | 8.3:+66421925 | None:intergenic |
| GCGTCAATTGCTTACAGATC+TGG | 0.400311 | 8.3:-66424071 | MS.gene068341:CDS |
| GAACTGTTTACTCTGACATA+TGG | 0.415874 | 8.3:-66424103 | MS.gene068341:CDS |
| AACTGTTTACTCTGACATAT+GGG | 0.439336 | 8.3:-66424102 | MS.gene068341:CDS |
| CACTACTGCAACATATTAAG+TGG | 0.462095 | 8.3:-66421962 | MS.gene068341:CDS |
| TTACTGCATCTGTGACCAAT+TGG | 0.470926 | 8.3:-66422072 | MS.gene068341:CDS |
| ATATTAAGTGGAGTCATTAG+AGG | 0.471581 | 8.3:-66421950 | MS.gene068341:CDS |
| TGGCTACGTGACGCGCTTCG+AGG | 0.478946 | 8.3:-66421333 | MS.gene068341:CDS |
| CATTAGAGGAGCCTTAGATA+TGG | 0.489659 | 8.3:-66421936 | MS.gene068341:intron |
| CAATGAAGGCTGAGGTCACT+TGG | 0.495529 | 8.3:-66421353 | MS.gene068341:CDS |
| TGCAGACCTTGAGAAGTGTC+AGG | 0.503862 | 8.3:+66421983 | None:intergenic |
| TGTCCCTTCAGCATTCCAAT+TGG | 0.505887 | 8.3:+66422057 | None:intergenic |
| GAGCTTCCTGACACTTCTCA+AGG | 0.519604 | 8.3:-66421989 | MS.gene068341:CDS |
| CACTACTCAGGTGTCAATGA+AGG | 0.520967 | 8.3:-66421367 | MS.gene068341:intron |
| GTTGGTTTGAAAATGTTCCT+TGG | 0.533914 | 8.3:-66422097 | MS.gene068341:CDS |
| TTGTGTTGATTTCAGAGAGA+CGG | 0.541444 | 8.3:-66423597 | MS.gene068341:CDS |
| TCAGGTGTCAATGAAGGCTG+AGG | 0.584417 | 8.3:-66421361 | MS.gene068341:intron |
| ATTGCTTACAGATCTGGAAG+AGG | 0.584590 | 8.3:-66424065 | MS.gene068341:CDS |
| CGCCAGATCGAGGAGCAACA+GGG | 0.594249 | 8.3:+66424292 | None:intergenic |
| AGCTCAACAAAATCTACCAA+AGG | 0.607221 | 8.3:+66422007 | None:intergenic |
| GTGACCAATTGGAATGCTGA+AGG | 0.607506 | 8.3:-66422061 | MS.gene068341:CDS |
| GCCAGATCGAGGAGCAACAG+GGG | 0.610973 | 8.3:+66424293 | None:intergenic |
| AATATTGCATCGCCAGATCG+AGG | 0.628537 | 8.3:+66424282 | None:intergenic |
| GACGGCCGAGGTGATTGCAA+AGG | 0.639432 | 8.3:-66423579 | MS.gene068341:intron |
| TGATTTCAGAGAGACGGCCG+AGG | 0.639877 | 8.3:-66423591 | MS.gene068341:CDS |
| TGACCAATTGGAATGCTGAA+GGG | 0.652019 | 8.3:-66422060 | MS.gene068341:CDS |
| CAATACCTTTGCAATCACCT+CGG | 0.674946 | 8.3:+66423574 | None:intergenic |
| ACTGTTTACTCTGACATATG+GGG | 0.685212 | 8.3:-66424101 | MS.gene068341:CDS |
| TCACAGATGCAGTAACACCA+AGG | 0.725020 | 8.3:+66422080 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAAAGAAAAAAAATTAA+GGG | + | chr8.3:66421337-66421356 | None:intergenic | 10.0% |
| !! | TATGTAAAGAAAAAAAATTA+AGG | + | chr8.3:66421338-66421357 | None:intergenic | 10.0% |
| !! | AAAATTATATAACTAAAGCA+TGG | + | chr8.3:66422635-66422654 | None:intergenic | 15.0% |
| !! | AAATTATATAACTAAAGCAT+GGG | + | chr8.3:66422634-66422653 | None:intergenic | 15.0% |
| !! | ATATCTTTATTAAAAGACTT+AGG | + | chr8.3:66422438-66422457 | None:intergenic | 15.0% |
| !! | TATCTTTATTAAAAGACTTA+GGG | + | chr8.3:66422437-66422456 | None:intergenic | 15.0% |
| !! | TATTAGTAAAGCATATTTAA+AGG | - | chr8.3:66423402-66423421 | MS.gene068341:intron | 15.0% |
| !! | TTACTATTTATTAAATAACG+CGG | + | chr8.3:66422170-66422189 | None:intergenic | 15.0% |
| !! | TTATCAATTTATAGAGTTAA+GGG | - | chr8.3:66422194-66422213 | MS.gene068341:intron | 15.0% |
| !! | TTTATCAATTTATAGAGTTA+AGG | - | chr8.3:66422193-66422212 | MS.gene068341:intron | 15.0% |
| !!! | ATAATGAATGGTTTTTTTAA+AGG | + | chr8.3:66423990-66424009 | None:intergenic | 15.0% |
| !!! | TCATATTTTCAAATTACTAT+CGG | - | chr8.3:66421654-66421673 | MS.gene068341:intron | 15.0% |
| !!! | TTTAACTTCCATTATTTATT+GGG | - | chr8.3:66424065-66424084 | MS.gene068341:CDS | 15.0% |
| !!! | TTTTAACTTCCATTATTTAT+TGG | - | chr8.3:66424064-66424083 | MS.gene068341:CDS | 15.0% |
| !! | AAAATACAGATATGAATCTA+GGG | + | chr8.3:66423199-66423218 | None:intergenic | 20.0% |
| !! | AACTGATAAGAGTAAAATAA+TGG | + | chr8.3:66422845-66422864 | None:intergenic | 20.0% |
| !! | AGATTATTCATGACTTTATA+TGG | - | chr8.3:66423901-66423920 | MS.gene068341:intron | 20.0% |
| !! | ATATGTGATATGTTAAAATG+AGG | + | chr8.3:66423763-66423782 | None:intergenic | 20.0% |
| !! | CAAGTATGTTTACAAATTAT+AGG | - | chr8.3:66422699-66422718 | MS.gene068341:intron | 20.0% |
| !! | CATACTTGTTCATATAAATT+TGG | + | chr8.3:66422687-66422706 | None:intergenic | 20.0% |
| !! | TACTATTTATTAAATAACGC+GGG | + | chr8.3:66422169-66422188 | None:intergenic | 20.0% |
| !! | TTACTAATCAAGCAAATTAA+GGG | + | chr8.3:66422130-66422149 | None:intergenic | 20.0% |
| !! | TTATATGGTTTAACTATGTA+AGG | - | chr8.3:66423916-66423935 | MS.gene068341:intron | 20.0% |
| !! | TTTACTAATCAAGCAAATTA+AGG | + | chr8.3:66422131-66422150 | None:intergenic | 20.0% |
| !!! | ATCTAAAAGTTCATTTTGAT+TGG | - | chr8.3:66423296-66423315 | MS.gene068341:intron | 20.0% |
| !!! | CAACTCATAATTATTTTTCT+TGG | - | chr8.3:66424092-66424111 | MS.gene068341:CDS | 20.0% |
| ! | ACTTTGGACTTATAACTTAT+AGG | + | chr8.3:66423124-66423143 | None:intergenic | 25.0% |
| ! | ATTTATCCTCATTGTGATAA+AGG | - | chr8.3:66422048-66422067 | MS.gene068341:CDS | 25.0% |
| ! | CAAAATACAGATATGAATCT+AGG | + | chr8.3:66423200-66423219 | None:intergenic | 25.0% |
| ! | CTGTCAATTTATAGAGTTAA+GGG | - | chr8.3:66422344-66422363 | MS.gene068341:intron | 25.0% |
| ! | GAAAAAAAGCTTATGAAACA+TGG | + | chr8.3:66422565-66422584 | None:intergenic | 25.0% |
| ! | TAATGATAATTCTATGTAGC+AGG | + | chr8.3:66422822-66422841 | None:intergenic | 25.0% |
| ! | TACTAATCAAGCAAATTAAG+GGG | + | chr8.3:66422129-66422148 | None:intergenic | 25.0% |
| ! | TATGGTAATAGTTTGATTGT+TGG | - | chr8.3:66423854-66423873 | MS.gene068341:intron | 25.0% |
| ! | TATGGTGTGTAATTGTATTT+GGG | - | chr8.3:66421825-66421844 | MS.gene068341:intron | 25.0% |
| ! | TCTTATCAAAATGACTGATT+GGG | - | chr8.3:66422462-66422481 | MS.gene068341:intron | 25.0% |
| ! | TGCTTTCAGAAAATAATGAA+TGG | + | chr8.3:66424002-66424021 | None:intergenic | 25.0% |
| ! | TTATGGTGTGTAATTGTATT+TGG | - | chr8.3:66421824-66421843 | MS.gene068341:intron | 25.0% |
| ! | TTATGGTGTGTATAAATAAG+AGG | - | chr8.3:66422300-66422319 | MS.gene068341:intron | 25.0% |
| ! | TTCTTATCAAAATGACTGAT+TGG | - | chr8.3:66422461-66422480 | MS.gene068341:intron | 25.0% |
| !! | ATTTTTCCTTATCACAGTAT+AGG | + | chr8.3:66422411-66422430 | None:intergenic | 25.0% |
| !!! | AAAGGTATTGTTTTGTTGTT+TGG | - | chr8.3:66421993-66422012 | MS.gene068341:CDS | 25.0% |
| !!! | ACAATATGAATTTTGCTGTT+TGG | - | chr8.3:66421861-66421880 | MS.gene068341:intron | 25.0% |
| !!! | CTCATAATTATTTTTCTTGG+AGG | - | chr8.3:66424095-66424114 | MS.gene068341:CDS | 25.0% |
| !!! | GTTGTTTTCCCAATAAATAA+TGG | + | chr8.3:66424076-66424095 | None:intergenic | 25.0% |
| !!! | TTCTTACCTCATTTTTTTTG+TGG | - | chr8.3:66423658-66423677 | MS.gene068341:CDS | 25.0% |
| !!! | TTTTCAAGATTTTGCTTTCT+TGG | - | chr8.3:66423951-66423970 | MS.gene068341:intron | 25.0% |
| AAAAGCTTAGTTAGTTGGTT+AGG | - | chr8.3:66422277-66422296 | MS.gene068341:intron | 30.0% | |
| AACTGTTTACTCTGACATAT+GGG | - | chr8.3:66421452-66421471 | MS.gene068341:intron | 30.0% | |
| ACAGAAACTTACCATATCTA+AGG | + | chr8.3:66423632-66423651 | None:intergenic | 30.0% | |
| AGCAAAATGTATTCTACTTG+GGG | - | chr8.3:66422888-66422907 | MS.gene068341:intron | 30.0% | |
| ATATTAAGTGGAGTCATTAG+AGG | - | chr8.3:66423604-66423623 | MS.gene068341:CDS | 30.0% | |
| CAGCAAAATGTATTCTACTT+GGG | - | chr8.3:66422887-66422906 | MS.gene068341:intron | 30.0% | |
| CCAAAAACTCATCAATCAAA+CGG | + | chr8.3:66421918-66421937 | None:intergenic | 30.0% | |
| CCTGTCAATTTATAGAGTTA+AGG | - | chr8.3:66422343-66422362 | MS.gene068341:intron | 30.0% | |
| CCTTAACTCTATAAATTGAC+AGG | + | chr8.3:66422346-66422365 | None:intergenic | 30.0% | |
| CGCTACAAACTAAGAAAATA+TGG | - | chr8.3:66423836-66423855 | MS.gene068341:intron | 30.0% | |
| CTGTATAAAACCAGAGTTAA+GGG | + | chr8.3:66423437-66423456 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr8.3:66423706-66423725 | None:intergenic | 30.0% | |
| GAGATAGATGAACAAATAGT+TGG | + | chr8.3:66423163-66423182 | None:intergenic | 30.0% | |
| GGTTTAACTATGTAAGGAAA+GGG | - | chr8.3:66423922-66423941 | MS.gene068341:intron | 30.0% | |
| TACAATTACACACCATAACA+TGG | + | chr8.3:66421822-66421841 | None:intergenic | 30.0% | |
| TACTCTTATCAGTTTGTAGA+TGG | - | chr8.3:66422851-66422870 | MS.gene068341:intron | 30.0% | |
| TCAGCAAAATGTATTCTACT+TGG | - | chr8.3:66422886-66422905 | MS.gene068341:intron | 30.0% | |
| TGAACAAAAGCTTAGTTAGT+TGG | - | chr8.3:66422272-66422291 | MS.gene068341:intron | 30.0% | |
| TGAAGAGTGAAGATAAACTT+TGG | + | chr8.3:66423140-66423159 | None:intergenic | 30.0% | |
| TGCTAGCACTAAATTTATTC+TGG | - | chr8.3:66422992-66423011 | MS.gene068341:intron | 30.0% | |
| TGGTTTAACTATGTAAGGAA+AGG | - | chr8.3:66423921-66423940 | MS.gene068341:intron | 30.0% | |
| TGTTCATCTATCTCAGTTAT+TGG | - | chr8.3:66423169-66423188 | MS.gene068341:intron | 30.0% | |
| TTAGTTAGTTGGTTAGGTTA+TGG | - | chr8.3:66422283-66422302 | MS.gene068341:intron | 30.0% | |
| TTGGACTTATAACTTATAGG+TGG | + | chr8.3:66423121-66423140 | None:intergenic | 30.0% | |
| TTTCACATCTACATAGTTGT+GGG | - | chr8.3:66421786-66421805 | MS.gene068341:intron | 30.0% | |
| ! | ATATGTACTGACCATTATGT+CGG | + | chr8.3:66423025-66423044 | None:intergenic | 30.0% |
| ! | ATTTTTCTTGGAGGAAAATG+AGG | - | chr8.3:66424104-66424123 | MS.gene068341:CDS | 30.0% |
| ! | GACATGTTGTTGTATTGTTT+TGG | - | chr8.3:66423516-66423535 | MS.gene068341:intron | 30.0% |
| ! | GGTATGACTTTTACAATAGT+GGG | - | chr8.3:66423317-66423336 | MS.gene068341:intron | 30.0% |
| ! | TGGTATGACTTTTACAATAG+TGG | - | chr8.3:66423316-66423335 | MS.gene068341:intron | 30.0% |
| ! | TTTGGTTTCTTTAGATGCTT+GGG | - | chr8.3:66422011-66422030 | MS.gene068341:CDS | 30.0% |
| ! | TTTTCACATCTACATAGTTG+TGG | - | chr8.3:66421785-66421804 | MS.gene068341:intron | 30.0% |
| !! | AAGTGAAGCATTTTGTCAAA+TGG | - | chr8.3:66422539-66422558 | MS.gene068341:intron | 30.0% |
| !! | ATTTTCAGGGGTTATAACAT+TGG | - | chr8.3:66421889-66421908 | MS.gene068341:intron | 30.0% |
| !!! | ATGTTGTTGTATTGTTTTGG+AGG | - | chr8.3:66423519-66423538 | MS.gene068341:intron | 30.0% |
| !!! | GGATTTTTAGTTCCATGTTA+TGG | - | chr8.3:66421807-66421826 | MS.gene068341:intron | 30.0% |
| !!! | TATGAATTTTGCTGTTTGGT+TGG | - | chr8.3:66421865-66421884 | MS.gene068341:intron | 30.0% |
| !!! | TTACCTCATTTTTTTTGTGG+TGG | - | chr8.3:66423661-66423680 | MS.gene068341:intron | 30.0% |
| AACACAAATGAAAAACAGCC+TGG | - | chr8.3:66422929-66422948 | MS.gene068341:intron | 35.0% | |
| ACTGTTTACTCTGACATATG+GGG | - | chr8.3:66421453-66421472 | MS.gene068341:intron | 35.0% | |
| ACTTTGTAGGTGGTTATAGT+TGG | - | chr8.3:66423246-66423265 | MS.gene068341:intron | 35.0% | |
| AGCTCAACAAAATCTACCAA+AGG | + | chr8.3:66423550-66423569 | None:intergenic | 35.0% | |
| ATGTGCTGCAAAAGATTACA+TGG | + | chr8.3:66424134-66424153 | None:intergenic | 35.0% | |
| ATTATCTAACTAACTCCCAG+AGG | + | chr8.3:66422220-66422239 | None:intergenic | 35.0% | |
| CACTACTGCAACATATTAAG+TGG | - | chr8.3:66423592-66423611 | MS.gene068341:CDS | 35.0% | |
| CCTGTATAAAACCAGAGTTA+AGG | + | chr8.3:66423438-66423457 | None:intergenic | 35.0% | |
| CTTCATTCATTGCTACGAAA+GGG | + | chr8.3:66424039-66424058 | None:intergenic | 35.0% | |
| GAACTGTTTACTCTGACATA+TGG | - | chr8.3:66421451-66421470 | MS.gene068341:intron | 35.0% | |
| TAGATTTCCTTGCACTTTGT+AGG | - | chr8.3:66423233-66423252 | MS.gene068341:intron | 35.0% | |
| TATAGGTGGTCTGATTAGAA+AGG | + | chr8.3:66423107-66423126 | None:intergenic | 35.0% | |
| TCCTTATATGGATACTCTTC+TGG | + | chr8.3:66424290-66424309 | None:intergenic | 35.0% | |
| TCTGCATTAGAAATTGCTCT+TGG | - | chr8.3:66421413-66421432 | MS.gene068341:intron | 35.0% | |
| TCTTCATTCATTGCTACGAA+AGG | + | chr8.3:66424040-66424059 | None:intergenic | 35.0% | |
| TGATAAAGGCCATGTAGAAA+TGG | - | chr8.3:66422062-66422081 | MS.gene068341:CDS | 35.0% | |
| TTCATTCATTGCTACGAAAG+GGG | + | chr8.3:66424038-66424057 | None:intergenic | 35.0% | |
| ! | CCGTTTGATTGATGAGTTTT+TGG | - | chr8.3:66421915-66421934 | MS.gene068341:intron | 35.0% |
| ! | GTTTGGTTTCTTTAGATGCT+TGG | - | chr8.3:66422010-66422029 | MS.gene068341:CDS | 35.0% |
| !! | CTGTTTGGTTGGTATTTTCA+GGG | - | chr8.3:66421876-66421895 | MS.gene068341:intron | 35.0% |
| !! | GTTGGTTTGAAAATGTTCCT+TGG | - | chr8.3:66423457-66423476 | MS.gene068341:intron | 35.0% |
| !! | TCCAGAAGAGTATCCATATA+AGG | - | chr8.3:66424286-66424305 | MS.gene068341:CDS | 35.0% |
| !! | TGTTTGGTTGGTATTTTCAG+GGG | - | chr8.3:66421877-66421896 | MS.gene068341:intron | 35.0% |
| !! | TTGTGTTGATTTCAGAGAGA+CGG | - | chr8.3:66421957-66421976 | MS.gene068341:CDS | 35.0% |
| !!! | AACTCTGGTTTTATACAGGT+TGG | - | chr8.3:66423439-66423458 | MS.gene068341:intron | 35.0% |
| !!! | CCTTAACTCTGGTTTTATAC+AGG | - | chr8.3:66423435-66423454 | MS.gene068341:intron | 35.0% |
| !!! | TGTTTTGGAGGATAATCCTT+TGG | - | chr8.3:66423531-66423550 | MS.gene068341:intron | 35.0% |
| ACAACAACAATCTCTAAGCC+AGG | + | chr8.3:66422950-66422969 | None:intergenic | 40.0% | |
| ACATGGCCTTTATCACAATG+AGG | + | chr8.3:66422057-66422076 | None:intergenic | 40.0% | |
| ACTTCTGATCAAGGCATGTT+TGG | - | chr8.3:66421571-66421590 | MS.gene068341:intron | 40.0% | |
| ATAACCACCTACAAAGTGCA+AGG | + | chr8.3:66423243-66423262 | None:intergenic | 40.0% | |
| ATTGCTTACAGATCTGGAAG+AGG | - | chr8.3:66421489-66421508 | MS.gene068341:intron | 40.0% | |
| ATTTCCTTGCACTTTGTAGG+TGG | - | chr8.3:66423236-66423255 | MS.gene068341:intron | 40.0% | |
| CAATACCTTTGCAATCACCT+CGG | + | chr8.3:66421983-66422002 | None:intergenic | 40.0% | |
| CAGTGTAACCCAACTATCTA+AGG | + | chr8.3:66422488-66422507 | None:intergenic | 40.0% | |
| CATTAGAGGAGCCTTAGATA+TGG | - | chr8.3:66423618-66423637 | MS.gene068341:CDS | 40.0% | |
| CTTGTACATTCACACTACTC+AGG | - | chr8.3:66424175-66424194 | MS.gene068341:intron | 40.0% | |
| GTTTCAGACAGATACAGACA+CGG | + | chr8.3:66421702-66421721 | None:intergenic | 40.0% | |
| TGACCAATTGGAATGCTGAA+GGG | - | chr8.3:66423494-66423513 | MS.gene068341:intron | 40.0% | |
| TGATTGGGCCTTAGATAGTT+GGG | - | chr8.3:66422477-66422496 | MS.gene068341:intron | 40.0% | |
| TTACTGCATCTGTGACCAAT+TGG | - | chr8.3:66423482-66423501 | MS.gene068341:intron | 40.0% | |
| TTATAGAGTTAAGGGCCTCT+GGG | - | chr8.3:66422202-66422221 | MS.gene068341:intron | 40.0% | |
| TTTATAGAGTTAAGGGCCTC+TGG | - | chr8.3:66422201-66422220 | MS.gene068341:intron | 40.0% | |
| !! | GCTGTTTGGTTGGTATTTTC+AGG | - | chr8.3:66421875-66421894 | MS.gene068341:intron | 40.0% |
| !!! | CTCATTTTTTTTGTGGTGGC+CGG | - | chr8.3:66423665-66423684 | MS.gene068341:intron | 40.0% |
| !!! | TCATTTTTTTTGTGGTGGCC+GGG | - | chr8.3:66423666-66423685 | MS.gene068341:intron | 40.0% |
| AATATTGCATCGCCAGATCG+AGG | + | chr8.3:66421275-66421294 | None:intergenic | 45.0% | |
| CAAGCAAATTAAGGGGACAC+TGG | + | chr8.3:66422122-66422141 | None:intergenic | 45.0% | |
| CACTACTCAGGTGTCAATGA+AGG | - | chr8.3:66424187-66424206 | MS.gene068341:intron | 45.0% | |
| CATTTGACTAGATGCACGAG+AGG | - | chr8.3:66422791-66422810 | MS.gene068341:intron | 45.0% | |
| CCACAGACTAAACGAACAAG+CGG | + | chr8.3:66422093-66422112 | None:intergenic | 45.0% | |
| CGGCCACCACAAAAAAAATG+AGG | + | chr8.3:66423667-66423686 | None:intergenic | 45.0% | |
| CTGATTGGGCCTTAGATAGT+TGG | - | chr8.3:66422476-66422495 | MS.gene068341:intron | 45.0% | |
| GAGAAGATGACCCTTAACTC+TGG | - | chr8.3:66423424-66423443 | MS.gene068341:intron | 45.0% | |
| GCGTCAATTGCTTACAGATC+TGG | - | chr8.3:66421483-66421502 | MS.gene068341:intron | 45.0% | |
| GTCTGACACGTGTTAATGTC+TGG | - | chr8.3:66421595-66421614 | MS.gene068341:intron | 45.0% | |
| GTGACCAATTGGAATGCTGA+AGG | - | chr8.3:66423493-66423512 | MS.gene068341:intron | 45.0% | |
| TATAGGTCCCCAAACTTCGA+TGG | + | chr8.3:66422394-66422413 | None:intergenic | 45.0% | |
| TCACAGATGCAGTAACACCA+AGG | + | chr8.3:66423477-66423496 | None:intergenic | 45.0% | |
| TGGGGACCTATACTGTGATA+AGG | - | chr8.3:66422402-66422421 | MS.gene068341:intron | 45.0% | |
| TGTCCCTTCAGCATTCCAAT+TGG | + | chr8.3:66423500-66423519 | None:intergenic | 45.0% | |
| ! | CATGCCTTGATCAGAAGTGT+CGG | + | chr8.3:66421569-66421588 | None:intergenic | 45.0% |
| ! | CTGGTTTGAGTCCGACATAA+TGG | - | chr8.3:66423011-66423030 | MS.gene068341:intron | 45.0% |
| ! | TGGGCTATGTGATGCTACTT+GGG | - | chr8.3:66423336-66423355 | MS.gene068341:intron | 45.0% |
| !!! | CATTTTTTTTGTGGTGGCCG+GGG | - | chr8.3:66423667-66423686 | MS.gene068341:intron | 45.0% |
| AAGGTTCAGAGTTCGAACCC+CGG | + | chr8.3:66423687-66423706 | None:intergenic | 50.0% | |
| AGGTGCAGACCATCGAAGTT+TGG | - | chr8.3:66422382-66422401 | MS.gene068341:intron | 50.0% | |
| ATACCAACTGAGTGCTCACG+AGG | - | chr8.3:66423727-66423746 | MS.gene068341:intron | 50.0% | |
| CAATGAAGGCTGAGGTCACT+TGG | - | chr8.3:66424201-66424220 | MS.gene068341:intron | 50.0% | |
| CCGCTTGTTCGTTTAGTCTG+TGG | - | chr8.3:66422090-66422109 | MS.gene068341:CDS | 50.0% | |
| GAGCTTCCTGACACTTCTCA+AGG | - | chr8.3:66423565-66423584 | MS.gene068341:intron | 50.0% | |
| GGTGCAGACCATCGAAGTTT+GGG | - | chr8.3:66422383-66422402 | MS.gene068341:intron | 50.0% | |
| GTGCAGACCATCGAAGTTTG+GGG | - | chr8.3:66422384-66422403 | MS.gene068341:intron | 50.0% | |
| TCAGGTGTCAATGAAGGCTG+AGG | - | chr8.3:66424193-66424212 | MS.gene068341:intron | 50.0% | |
| TTGACTAGATGCACGAGAGG+AGG | - | chr8.3:66422794-66422813 | MS.gene068341:intron | 50.0% | |
| ! | GTGGGCTATGTGATGCTACT+TGG | - | chr8.3:66423335-66423354 | MS.gene068341:intron | 50.0% |
| ! | TCGTGAGCACTCAGTTGGTA+TGG | + | chr8.3:66423728-66423747 | None:intergenic | 50.0% |
| !! | AGCACCGACACTTCTGATCA+AGG | - | chr8.3:66421562-66421581 | MS.gene068341:intron | 50.0% |
| !! | GCGGAAGTGCCATTTCTACA+TGG | + | chr8.3:66422074-66422093 | None:intergenic | 50.0% |
| !! | TGCAGACCTTGAGAAGTGTC+AGG | + | chr8.3:66423574-66423593 | None:intergenic | 50.0% |
| TCTCCTCGTGAGCACTCAGT+TGG | + | chr8.3:66423733-66423752 | None:intergenic | 55.0% | |
| TGATTTCAGAGAGACGGCCG+AGG | - | chr8.3:66421963-66421982 | MS.gene068341:CDS | 55.0% | |
| ! | AGTTAAGGGCCTCTGGGAGT+TGG | - | chr8.3:66422208-66422227 | MS.gene068341:intron | 55.0% |
| ! | GTTAAGGGCCTCTGGGAGTT+GGG | - | chr8.3:66422209-66422228 | MS.gene068341:intron | 55.0% |
| CGCCAGATCGAGGAGCAACA+GGG | + | chr8.3:66421265-66421284 | None:intergenic | 60.0% | |
| GACGGCCGAGGTGATTGCAA+AGG | - | chr8.3:66421975-66421994 | MS.gene068341:CDS | 60.0% | |
| GCCAGATCGAGGAGCAACAG+GGG | + | chr8.3:66421264-66421283 | None:intergenic | 60.0% | |
| TCGCCAGATCGAGGAGCAAC+AGG | + | chr8.3:66421266-66421285 | None:intergenic | 60.0% | |
| CTGCACCTCCCAACTCCCAG+AGG | + | chr8.3:66422370-66422389 | None:intergenic | 65.0% | |
| GCCCCTGTTGCTCCTCGATC+TGG | - | chr8.3:66421260-66421279 | MS.gene068341:CDS | 65.0% | |
| TGGCTACGTGACGCGCTTCG+AGG | - | chr8.3:66424221-66424240 | MS.gene068341:intron | 65.0% | |
| ! | AAGGGCCTCTGGGAGTTGGG+AGG | - | chr8.3:66422362-66422381 | MS.gene068341:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 66421257 | 66424319 | 66421257 | ID=MS.gene068341 |
| chr8.3 | mRNA | 66421257 | 66424319 | 66421257 | ID=MS.gene068341.t1;Parent=MS.gene068341 |
| chr8.3 | exon | 66424263 | 66424319 | 66424263 | ID=MS.gene068341.t1.exon1;Parent=MS.gene068341.t1 |
| chr8.3 | CDS | 66424263 | 66424319 | 66424263 | ID=cds.MS.gene068341.t1;Parent=MS.gene068341.t1 |
| chr8.3 | exon | 66424034 | 66424131 | 66424034 | ID=MS.gene068341.t1.exon2;Parent=MS.gene068341.t1 |
| chr8.3 | CDS | 66424034 | 66424131 | 66424034 | ID=cds.MS.gene068341.t1;Parent=MS.gene068341.t1 |
| chr8.3 | exon | 66423580 | 66423679 | 66423580 | ID=MS.gene068341.t1.exon3;Parent=MS.gene068341.t1 |
| chr8.3 | CDS | 66423580 | 66423679 | 66423580 | ID=cds.MS.gene068341.t1;Parent=MS.gene068341.t1 |
| chr8.3 | exon | 66421937 | 66422119 | 66421937 | ID=MS.gene068341.t1.exon4;Parent=MS.gene068341.t1 |
| chr8.3 | CDS | 66421937 | 66422119 | 66421937 | ID=cds.MS.gene068341.t1;Parent=MS.gene068341.t1 |
| chr8.3 | exon | 66421257 | 66421379 | 66421257 | ID=MS.gene068341.t1.exon5;Parent=MS.gene068341.t1 |
| chr8.3 | CDS | 66421257 | 66421379 | 66421257 | ID=cds.MS.gene068341.t1;Parent=MS.gene068341.t1 |
| Gene Sequence |
| Protein sequence |
