AlfalfaGEDB | MS.gene98171

M. sativa cultivar XinJiangDaYe / MS.gene98171

KEGG: K02932
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008097 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0019843 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0097159 GO:0110165 GO:1901363 GO:1901564 GO:1901566 GO:1901576
PFAM: PF14204.9 PF17144.7

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98171.t1	XP_013444706.1	97.6	292	7	0	1	292	1	292	2.00E-154	555.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98171.t1	Q8LBI1	84.4	288	45	0	1	288	1	288	4.8e-136	485.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98171.t1	B7FJX5	97.6	292	7	0	1	292	1	292	1.5e-154	555.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049306	MS.gene98171	0.824851	6.45E-54	-1.69E-46
MS.gene049361	MS.gene98171	0.885826	5.81E-72	-1.69E-46
MS.gene049387	MS.gene98171	0.815115	1.09E-51	-1.69E-46
MS.gene050134	MS.gene98171	0.907076	7.49E-81	-1.69E-46
MS.gene050791	MS.gene98171	0.879346	1.34E-69	-1.69E-46
MS.gene050912	MS.gene98171	0.853586	2.17E-61	-1.69E-46
MS.gene051925	MS.gene98171	0.84586	3.12E-59	-1.69E-46
MS.gene051927	MS.gene98171	0.824874	6.37E-54	-1.69E-46
MS.gene051984	MS.gene98171	0.874396	6.98E-68	-1.69E-46
MS.gene052209	MS.gene98171	0.809294	2.03E-50	-1.69E-46
MS.gene052664	MS.gene98171	0.881557	2.17E-70	-1.69E-46
MS.gene052666	MS.gene98171	0.869171	3.78E-66	-1.69E-46
MS.gene053224	MS.gene98171	0.878739	2.20E-69	-1.69E-46
MS.gene054624	MS.gene98171	0.832781	7.77E-56	-1.69E-46
MS.gene055232	MS.gene98171	0.82719	1.79E-54	-1.69E-46
MS.gene057272	MS.gene98171	0.904213	1.55E-79	-1.69E-46
MS.gene057641	MS.gene98171	0.844254	8.47E-59	-1.69E-46
MS.gene057643	MS.gene98171	0.879659	1.04E-69	-1.69E-46
MS.gene059340	MS.gene98171	0.816739	4.73E-52	-1.69E-46
MS.gene060483	MS.gene98171	0.889704	1.91E-73	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene068341	MS.gene98171	PPI
MS.gene32092	MS.gene98171	PPI
MS.gene64512	MS.gene98171	PPI
MS.gene068781	MS.gene98171	PPI
MS.gene39195	MS.gene98171	PPI
MS.gene87309	MS.gene98171	PPI
MS.gene98171	MS.gene015586	PPI
MS.gene40019	MS.gene98171	PPI
MS.gene073893	MS.gene98171	PPI
MS.gene90360	MS.gene98171	PPI
MS.gene063385	MS.gene98171	PPI
MS.gene035194	MS.gene98171	PPI
MS.gene77667	MS.gene98171	PPI
MS.gene77392	MS.gene98171	PPI
MS.gene91244	MS.gene98171	PPI
MS.gene94588	MS.gene98171	PPI
MS.gene061905	MS.gene98171	PPI
MS.gene045180	MS.gene98171	PPI
MS.gene065189	MS.gene98171	PPI
MS.gene49109	MS.gene98171	PPI
MS.gene95828	MS.gene98171	PPI
MS.gene061166	MS.gene98171	PPI
MS.gene053448	MS.gene98171	PPI
MS.gene53524	MS.gene98171	PPI
MS.gene059846	MS.gene98171	PPI
MS.gene035396	MS.gene98171	PPI
MS.gene09845	MS.gene98171	PPI
MS.gene40020	MS.gene98171	PPI
MS.gene022752	MS.gene98171	PPI
MS.gene014499	MS.gene98171	PPI
MS.gene013607	MS.gene98171	PPI
MS.gene003693	MS.gene98171	PPI
MS.gene031484	MS.gene98171	PPI
MS.gene066300	MS.gene98171	PPI
MS.gene81493	MS.gene98171	PPI
MS.gene034931	MS.gene98171	PPI
MS.gene034607	MS.gene98171	PPI
MS.gene39294	MS.gene98171	PPI
MS.gene059880	MS.gene98171	PPI
MS.gene018651	MS.gene98171	PPI
MS.gene069038	MS.gene98171	PPI
MS.gene072782	MS.gene98171	PPI
MS.gene037902	MS.gene98171	PPI
MS.gene041623	MS.gene98171	PPI
MS.gene98171	MS.gene32091	PPI
MS.gene43350	MS.gene98171	PPI
MS.gene014498	MS.gene98171	PPI
MS.gene98171	MS.gene95471	PPI
MS.gene95644	MS.gene98171	PPI
MS.gene98171	MS.gene50744	PPI
MS.gene23314	MS.gene98171	PPI
MS.gene03059	MS.gene98171	PPI
MS.gene039132	MS.gene98171	PPI
MS.gene95472	MS.gene98171	PPI
MS.gene79721	MS.gene98171	PPI
MS.gene56525	MS.gene98171	PPI
MS.gene06729	MS.gene98171	PPI
MS.gene08488	MS.gene98171	PPI
MS.gene040601	MS.gene98171	PPI
MS.gene98171	MS.gene96780	PPI
MS.gene96826	MS.gene98171	PPI
MS.gene25010	MS.gene98171	PPI
MS.gene59549	MS.gene98171	PPI
MS.gene75537	MS.gene98171	PPI
MS.gene98171	MS.gene74532	PPI
MS.gene031550	MS.gene98171	PPI
MS.gene99779	MS.gene98171	PPI
MS.gene83961	MS.gene98171	PPI
MS.gene004705	MS.gene98171	PPI
MS.gene47347	MS.gene98171	PPI
MS.gene98171	MS.gene067072	PPI
MS.gene060923	MS.gene98171	PPI
MS.gene23437	MS.gene98171	PPI
MS.gene45646	MS.gene98171	PPI
MS.gene006753	MS.gene98171	PPI
MS.gene06946	MS.gene98171	PPI
MS.gene41329	MS.gene98171	PPI
MS.gene059878	MS.gene98171	PPI
MS.gene073150	MS.gene98171	PPI
MS.gene02109	MS.gene98171	PPI
MS.gene42324	MS.gene98171	PPI
MS.gene004704	MS.gene98171	PPI
MS.gene92142	MS.gene98171	PPI
MS.gene000480	MS.gene98171	PPI
MS.gene98171	MS.gene96949	PPI
MS.gene59609	MS.gene98171	PPI
MS.gene69196	MS.gene98171	PPI
MS.gene031406	MS.gene98171	PPI
MS.gene98171	MS.gene003314	PPI
MS.gene064682	MS.gene98171	PPI
MS.gene81068	MS.gene98171	PPI
MS.gene031378	MS.gene98171	PPI
MS.gene46475	MS.gene98171	PPI
MS.gene019309	MS.gene98171	PPI
MS.gene53720	MS.gene98171	PPI
MS.gene020215	MS.gene98171	PPI
MS.gene34149	MS.gene98171	PPI
MS.gene018553	MS.gene98171	PPI
MS.gene006800	MS.gene98171	PPI
MS.gene066301	MS.gene98171	PPI
MS.gene85984	MS.gene98171	PPI
MS.gene006276	MS.gene98171	PPI
MS.gene066348	MS.gene98171	PPI
MS.gene050985	MS.gene98171	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98171.t1	MTR_8g028125	97.000	300	9	0	1	300	1	300	0.0	595
MS.gene98171.t1	MTR_3g118030	89.310	290	31	0	1	290	1	290	0.0	537
MS.gene98171.t1	MTR_4g016680	53.548	155	33	1	127	281	8	123	4.07e-45	150
MS.gene98171.t1	MTR_2g435940	69.444	72	17	1	178	244	24	95	1.93e-25	97.8

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98171.t1	AT3G25520	84.138	290	46	1	290	1	290	0.0	512
MS.gene98171.t1	AT3G25520	84.138	290	46	1	290	1	290	0.0	512
MS.gene98171.t1	AT5G39740	83.448	290	48	1	290	1	290	0.0	512
MS.gene98171.t1	AT5G39740	83.448	290	48	1	290	1	290	0.0	512
MS.gene98171.t1	AT3G25520	81.461	178	33	113	290	2	179	1.27e-105	306

Find 82 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAATACCTCTTGTGTTGTTT+TGG	0.227809	8.2:-69052588	None:intergenic
GTTCACCGCAAGTATATCTT+TGG	0.291930	8.2:+69052287	MS.gene98171:CDS
TGTTCTTATCCTGGTTAATC+AGG	0.320790	8.2:-69050658	None:intergenic
TTCTCTGATTTCTTAATTGT+AGG	0.330648	8.2:-69052558	None:intergenic
CACAGTGACAAAAGGTTTGC+TGG	0.351205	8.2:+69052230	MS.gene98171:CDS
TGTTGTACTTGTTCTTATCC+TGG	0.370099	8.2:-69050667	None:intergenic
CCGTGTCTTTGGTGCCTTGA+AGG	0.376067	8.2:+69052090	MS.gene98171:CDS
ACTACTGGAAACCGTGTCTT+TGG	0.377680	8.2:+69052079	MS.gene98171:CDS
TTGTGCCACAATGTCCTTGT+TGG	0.380203	8.2:-69051619	None:intergenic
TTCACCGCAAGTATATCTTT+GGG	0.381172	8.2:+69052288	MS.gene98171:CDS
GAGAGCACGGAATGGCCTCC+TGG	0.398347	8.2:-69052032	None:intergenic
TTTGAATTAGGTTTATGTTA+AGG	0.401148	8.2:+69050447	MS.gene98171:intron
CTTAGCTTTCCGCTCCTCAT+AGG	0.402531	8.2:-69052725	None:intergenic
ATAGTGTCCGCTAGTATTGC+TGG	0.407211	8.2:+69051642	MS.gene98171:CDS
GAATATCCAAACCACCATCT+AGG	0.409965	8.2:-69052205	None:intergenic
TCGGACAACAAATCGGTACT+TGG	0.416359	8.2:-69050693	None:intergenic
TTCTTCTCTTGAACTTGACT+TGG	0.430059	8.2:-69050501	None:intergenic
TGTATTCACTAAAGTGAGTC+TGG	0.437754	8.2:-69052464	None:intergenic
TGAGATGGATGAGGAGTATG+AGG	0.439950	8.2:+69051880	MS.gene98171:CDS
TTATTGCACTGGACTCCTCT+TGG	0.442461	8.2:+69051835	MS.gene98171:CDS
GGTTTACAGGGAGCCCTAGA+TGG	0.454096	8.2:+69052191	MS.gene98171:intron
GTAACGCTTGAAGTAAGCCT+TGG	0.458552	8.2:-69050479	None:intergenic
GGTCTTGTTAAGACCACTAC+TGG	0.466788	8.2:+69052064	MS.gene98171:CDS
GGGAGCCCTAGATGGTGGTT+TGG	0.466900	8.2:+69052199	MS.gene98171:intron
AATGGCCTCCTGGACTCAGC+TGG	0.470728	8.2:-69052022	None:intergenic
TTCCGTGCTCTCCTTGATGT+TGG	0.475927	8.2:+69052043	MS.gene98171:CDS
AAGTGAGTCTGGAATTTCTC+AGG	0.489225	8.2:-69052453	None:intergenic
CCACACTTTGGTCTTTCAGT+AGG	0.491595	8.2:+69051702	MS.gene98171:CDS
TGAGGAGCGGAAAGCTAAGC+TGG	0.494546	8.2:+69052729	MS.gene98171:CDS
TACCTGCAGCATAATTTGTA+AGG	0.500398	8.2:-69051725	None:intergenic
GTCAAGTTCAAGAGAAGAAG+AGG	0.501877	8.2:+69050505	MS.gene98171:CDS
GGCCTTACAAATTATGCTGC+AGG	0.502530	8.2:+69051723	MS.gene98171:CDS
AATTAAGAAATCAGAGAAGA+AGG	0.503717	8.2:+69052563	MS.gene98171:CDS
CAGTTGAGCCAGCTGAGTCC+AGG	0.512028	8.2:+69052014	MS.gene98171:CDS
CGGACAACAAATCGGTACTT+GGG	0.512041	8.2:-69050692	None:intergenic
TCTGAAGAAGCTTACCTATG+AGG	0.512591	8.2:+69052711	MS.gene98171:CDS
TTTAGTGAATACATCAAGAA+AGG	0.515819	8.2:+69052474	MS.gene98171:CDS
ATACAAATCGGACAACAAAT+CGG	0.520677	8.2:-69050700	None:intergenic
ATATTCCTCACAGTGACAAA+AGG	0.523020	8.2:+69052222	MS.gene98171:CDS
TCTCATGAGCTACCACACTT+TGG	0.524328	8.2:+69051690	MS.gene98171:CDS
GAAGAAAGAGCTCGATGCTG+AGG	0.526853	8.2:+69052265	MS.gene98171:CDS
ACAGTGACAAAAGGTTTGCT+GGG	0.528756	8.2:+69052231	MS.gene98171:CDS
AATATCCAAACCACCATCTA+GGG	0.535350	8.2:-69052204	None:intergenic
CTCAGGCTCATCTTCAGTCA+AGG	0.537919	8.2:-69052436	None:intergenic
TCACCGCAAGTATATCTTTG+GGG	0.552159	8.2:+69052289	MS.gene98171:CDS
ATGTGACCAGCTTATTGCAC+TGG	0.552187	8.2:+69051824	MS.gene98171:intron
AAAGACACGGTTTCCAGTAG+TGG	0.561300	8.2:-69052077	None:intergenic
TCGTATTCGCCTGATTAACC+AGG	0.567348	8.2:+69050649	MS.gene98171:CDS
TGTTAAGGCTCAGAAATCCA+AGG	0.572355	8.2:+69050462	MS.gene98171:CDS
TTACAGGGAGCCCTAGATGG+TGG	0.573973	8.2:+69052194	MS.gene98171:intron
ATACATCAAGAAAGGAATTG+AGG	0.575667	8.2:+69052482	MS.gene98171:CDS
AAGTGTCTTCAGAACACGAC+GGG	0.584750	8.2:-69051858	None:intergenic
GAGATGGATGAGGAGTATGA+GGG	0.586795	8.2:+69051881	MS.gene98171:CDS
AAGGTTTGCTGGGTTTGACA+AGG	0.586996	8.2:+69052241	MS.gene98171:CDS
AAGAAAGGAATTGAGGCAGA+TGG	0.591978	8.2:+69052489	MS.gene98171:CDS
CCTTGAGGAGCTGTACAAGA+AGG	0.592833	8.2:+69052512	MS.gene98171:CDS
CACCGCAAGTATATCTTTGG+GGG	0.596512	8.2:+69052290	MS.gene98171:CDS
GAAGACACTTGAGATGGATG+AGG	0.597148	8.2:+69051871	MS.gene98171:CDS
GACCAACATCAAGGAGAGCA+CGG	0.604422	8.2:-69052045	None:intergenic
TAATGCTGCTGTTGATGATG+AGG	0.605286	8.2:+69052771	MS.gene98171:CDS
CCTTCAAGGCACCAAAGACA+CGG	0.609408	8.2:-69052090	None:intergenic
GGACAACAAATCGGTACTTG+GGG	0.611837	8.2:-69050691	None:intergenic
TTGAGCCAGCTGAGTCCAGG+AGG	0.614063	8.2:+69052017	MS.gene98171:CDS
TCTTAACAAGACCAACATCA+AGG	0.618405	8.2:-69052054	None:intergenic
ACATGTTGCTGCATACATGA+AGG	0.618860	8.2:+69052313	MS.gene98171:CDS
TGCTGTTGATGATGAGGACG+AGG	0.625300	8.2:+69052777	MS.gene98171:CDS
GGAGTATGAGGGAAATGTTG+AGG	0.639543	8.2:+69051892	MS.gene98171:CDS
TGTTCTGAAGACACTTGAGA+TGG	0.640254	8.2:+69051865	MS.gene98171:CDS
CCTTCTTGTACAGCTCCTCA+AGG	0.646258	8.2:-69052512	None:intergenic
AGGCTCCAAAACAACACAAG+AGG	0.648143	8.2:+69052583	MS.gene98171:CDS
TCAGAACACGACGGGCCAAG+AGG	0.649699	8.2:-69051850	None:intergenic
ACATCAAGGAGAGCACGGAA+TGG	0.653230	8.2:-69052040	None:intergenic
TTAGACCAACAAGGACATTG+TGG	0.654891	8.2:+69051614	MS.gene98171:intron
AATTGAGGCAGATGGCCTTG+AGG	0.657052	8.2:+69052497	MS.gene98171:CDS
TAATCAGGCGAATACGAGCA+CGG	0.680796	8.2:-69050643	None:intergenic
AACTCCTTATTAGACCAACA+AGG	0.684350	8.2:+69051605	MS.gene98171:intron
AGAAGCTTACCTATGAGGAG+CGG	0.703780	8.2:+69052716	MS.gene98171:CDS
AATATCACCAGCAATACTAG+CGG	0.722529	8.2:-69051649	None:intergenic
CCTACTGAAAGACCAAAGTG+TGG	0.729262	8.2:-69051702	None:intergenic
GACAACAAATCGGTACTTGG+GGG	0.739465	8.2:-69050690	None:intergenic
GATCAGCACGAATTGCAGCG+TGG	0.746447	8.2:-69052536	None:intergenic
CAAGTGTCTTCAGAACACGA+CGG	0.780703	8.2:-69051859	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTAATTATTGATTTCTTA+TGG	+	chr8.2:69051235-69051254	MS.gene98171:intron	10.0%
!!!	TAATTAATGTTGATTTTTTA+TGG	+	chr8.2:69050846-69050865	MS.gene98171:intron	10.0%
!!	TTAAATTTAAATGAGAACAA+CGG	-	chr8.2:69051756-69051775	None:intergenic	15.0%
!!!	TTTTTTTTATGTGATTTAAC+TGG	+	chr8.2:69050805-69050824	MS.gene98171:intron	15.0%
!!	AATTGTTAGAAATGTTATTG+GGG	+	chr8.2:69050992-69051011	MS.gene98171:intron	20.0%
!!	AGATTCTAGTATGAAATAAA+AGG	-	chr8.2:69052618-69052637	None:intergenic	20.0%
!!	ATTACACAAAAAAAACCAAA+AGG	-	chr8.2:69050932-69050951	None:intergenic	20.0%
!!	CAATTGTTAGAAATGTTATT+GGG	+	chr8.2:69050991-69051010	MS.gene98171:intron	20.0%
!!	GATTCTAGTATGAAATAAAA+GGG	-	chr8.2:69052617-69052636	None:intergenic	20.0%
!!	TAAGCTATCAAAAAGTTATA+AGG	-	chr8.2:69051484-69051503	None:intergenic	20.0%
!!	TCAATTGTTAGAAATGTTAT+TGG	+	chr8.2:69050990-69051009	MS.gene98171:intron	20.0%
!!	TCATGTAATAAATAATACTC+AGG	-	chr8.2:69052645-69052664	None:intergenic	20.0%
!!	TTACACAAAAAAAACCAAAA+GGG	-	chr8.2:69050931-69050950	None:intergenic	20.0%
!!	TTTGAATTAGGTTTATGTTA+AGG	+	chr8.2:69050447-69050466	MS.gene98171:intron	20.0%
!!!	GTTTTTGATTAGCATTTTTA+AGG	+	chr8.2:69050954-69050973	MS.gene98171:intron	20.0%
!!!	TGTTTTGTGTTTTTTGAATT+AGG	+	chr8.2:69050435-69050454	MS.gene98171:intron	20.0%
!!!	TTAGTTTAATCCTTTTAAAC+AGG	+	chr8.2:69051973-69051992	MS.gene98171:intron	20.0%
!!!	TTATTTGTTGATTTTGTTAG+TGG	+	chr8.2:69051363-69051382	MS.gene98171:intron	20.0%
!!!	TTTATTTGTTAATCTTGTGT+AGG	+	chr8.2:69052683-69052702	MS.gene98171:intron	20.0%
!	AATATTTGTGATGGTTTACA+GGG	+	chr8.2:69052179-69052198	MS.gene98171:intron	25.0%
!	AATTAAGAAATCAGAGAAGA+AGG	+	chr8.2:69052563-69052582	MS.gene98171:CDS	25.0%
!	AATTGTTTGTAATGCTAGTT+TGG	+	chr8.2:69051401-69051420	MS.gene98171:intron	25.0%
!	ATTGTTAGAAATGTTATTGG+GGG	+	chr8.2:69050993-69051012	MS.gene98171:intron	25.0%
!	CAAAAAGTTATAAGGTGATT+TGG	-	chr8.2:69051476-69051495	None:intergenic	25.0%
!	TAATTGTTAGAAATGCTAGT+CGG	+	chr8.2:69051124-69051143	MS.gene98171:intron	25.0%
!	TATAATTATCTCACATAACC+AGG	-	chr8.2:69051201-69051220	None:intergenic	25.0%
!	TTCTCTGATTTCTTAATTGT+AGG	-	chr8.2:69052561-69052580	None:intergenic	25.0%
!	TTTAGTGAATACATCAAGAA+AGG	+	chr8.2:69052474-69052493	MS.gene98171:CDS	25.0%
!!	CTATTGTTAGTTGTTATTGT+TGG	+	chr8.2:69051558-69051577	MS.gene98171:intron	25.0%
!!	TCAATGTTATTCACAGATTT+TGG	-	chr8.2:69052402-69052421	None:intergenic	25.0%
!!	TGAATAATCAGCATACATTT+TGG	-	chr8.2:69050588-69050607	None:intergenic	25.0%
!!!	CTTTGAGATAAAAACCAAAA+GGG	-	chr8.2:69051031-69051050	None:intergenic	25.0%
!!!	GTTGATTTGAATATTTGTGA+TGG	+	chr8.2:69052170-69052189	MS.gene98171:intron	25.0%
!!!	TAATGTTTTTAGTACCTTCA+AGG	-	chr8.2:69052107-69052126	None:intergenic	25.0%
!!!	TCTTTGAGATAAAAACCAAA+AGG	-	chr8.2:69051032-69051051	None:intergenic	25.0%
	AAAAAAAACCAAAAGGGTTG+TGG	-	chr8.2:69050925-69050944	None:intergenic	30.0%
	AAATAGTTGAATTTCACAGC+AGG	-	chr8.2:69050367-69050386	None:intergenic	30.0%
	AATTGTTAGAAATGCTAGTC+GGG	+	chr8.2:69051125-69051144	MS.gene98171:intron	30.0%
	AATTGTTAGAAATGCTAGTG+AGG	+	chr8.2:69051273-69051292	MS.gene98171:intron	30.0%
	AGAAAAAACCAAAAGGATTG+TGG	-	chr8.2:69051309-69051328	None:intergenic	30.0%
	AGAACGAAATGAAGAGAAAA+TGG	-	chr8.2:69050231-69050250	None:intergenic	30.0%
	ATACAAATCGGACAACAAAT+CGG	-	chr8.2:69050703-69050722	None:intergenic	30.0%
	ATACATCAAGAAAGGAATTG+AGG	+	chr8.2:69052482-69052501	MS.gene98171:CDS	30.0%
	ATTGTTAGAAATGCTAGTGA+GGG	+	chr8.2:69051274-69051293	MS.gene98171:intron	30.0%
	CATAACTATAAGCTGACAAA+AGG	-	chr8.2:69050726-69050745	None:intergenic	30.0%
	GAAGATGATGAAAACCAAAA+GGG	-	chr8.2:69051170-69051189	None:intergenic	30.0%
	GAATATTTGTGATGGTTTAC+AGG	+	chr8.2:69052178-69052197	MS.gene98171:intron	30.0%
	GATAAAAACCAAAAGGGTTA+AGG	-	chr8.2:69051025-69051044	None:intergenic	30.0%
	GATCTAAGAAATTAACGCTA+TGG	-	chr8.2:69050255-69050274	None:intergenic	30.0%
	TCCTTGAAGAAAAAACCAAA+AGG	-	chr8.2:69051316-69051335	None:intergenic	30.0%
!	AATTGATCGTTGCATTTTTG+TGG	+	chr8.2:69051087-69051106	MS.gene98171:intron	30.0%
!	TATAAGGTGATTTGGAAAGA+GGG	-	chr8.2:69051468-69051487	None:intergenic	30.0%
!	TATGATTTTCATTGATGCAC+TGG	+	chr8.2:69050742-69050761	MS.gene98171:intron	30.0%
!	TTATAAGGTGATTTGGAAAG+AGG	-	chr8.2:69051469-69051488	None:intergenic	30.0%
!!!	AAATACCTCTTGTGTTGTTT+TGG	-	chr8.2:69052591-69052610	None:intergenic	30.0%
!!!	TCCTTTTGGTTTTTTCTTCA+AGG	+	chr8.2:69051312-69051331	MS.gene98171:intron	30.0%
!!!	TTTTTTCTTCAAGGAAGACA+TGG	+	chr8.2:69051321-69051340	MS.gene98171:intron	30.0%
	AACTCCTTATTAGACCAACA+AGG	+	chr8.2:69051605-69051624	MS.gene98171:intron	35.0%
	AATATCACCAGCAATACTAG+CGG	-	chr8.2:69051652-69051671	None:intergenic	35.0%
	AATATCCAAACCACCATCTA+GGG	-	chr8.2:69052207-69052226	None:intergenic	35.0%
	ATATTCCTCACAGTGACAAA+AGG	+	chr8.2:69052222-69052241	MS.gene98171:CDS	35.0%
	GCTGACAAAAGGATACAAAT+CGG	-	chr8.2:69050715-69050734	None:intergenic	35.0%
	GGAAGATGATGAAAACCAAA+AGG	-	chr8.2:69051171-69051190	None:intergenic	35.0%
	TCTTAACAAGACCAACATCA+AGG	-	chr8.2:69052057-69052076	None:intergenic	35.0%
	TGTATTCACTAAAGTGAGTC+TGG	-	chr8.2:69052467-69052486	None:intergenic	35.0%
	TGTTCTTATCCTGGTTAATC+AGG	-	chr8.2:69050661-69050680	None:intergenic	35.0%
	TGTTGTACTTGTTCTTATCC+TGG	-	chr8.2:69050670-69050689	None:intergenic	35.0%
	TTCACCGCAAGTATATCTTT+GGG	+	chr8.2:69052288-69052307	MS.gene98171:CDS	35.0%
	TTCTTCTCTTGAACTTGACT+TGG	-	chr8.2:69050504-69050523	None:intergenic	35.0%
	TTGTTAGAAATGCTAGTGAG+GGG	+	chr8.2:69051275-69051294	MS.gene98171:intron	35.0%
!	AATCCTTTTAAACAGGCTAC+TGG	+	chr8.2:69051980-69051999	MS.gene98171:intron	35.0%
!	AGTTGAATCCACAATCCTTT+TGG	+	chr8.2:69051298-69051317	MS.gene98171:intron	35.0%
!	ATATGAGTTGGAGGGATTAA+AGG	-	chr8.2:69051443-69051462	None:intergenic	35.0%
!	ATGTCCTTGTTGGTCTAATA+AGG	-	chr8.2:69051612-69051631	None:intergenic	35.0%
!	TACCTGCAGCATAATTTGTA+AGG	-	chr8.2:69051728-69051747	None:intergenic	35.0%
	AAGAAAGGAATTGAGGCAGA+TGG	+	chr8.2:69052489-69052508	MS.gene98171:CDS	40.0%
	AATGCTACTGTATGCTACTG+TGG	+	chr8.2:69050890-69050909	MS.gene98171:intron	40.0%
	ACATGTTGCTGCATACATGA+AGG	+	chr8.2:69052313-69052332	MS.gene98171:CDS	40.0%
	ATGCTACTGTATGCTACTGT+GGG	+	chr8.2:69050891-69050910	MS.gene98171:intron	40.0%
	ATTCGATGATGAATCTGCAG+AGG	+	chr8.2:69050607-69050626	MS.gene98171:intron	40.0%
	GAATATCCAAACCACCATCT+AGG	-	chr8.2:69052208-69052227	None:intergenic	40.0%
	GCAAAGAACAGTGTCTAGAT+AGG	-	chr8.2:69051946-69051965	None:intergenic	40.0%
	GTCAAGTTCAAGAGAAGAAG+AGG	+	chr8.2:69050505-69050524	MS.gene98171:CDS	40.0%
	GTTCACCGCAAGTATATCTT+TGG	+	chr8.2:69052287-69052306	MS.gene98171:CDS	40.0%
	TCACCGCAAGTATATCTTTG+GGG	+	chr8.2:69052289-69052308	MS.gene98171:CDS	40.0%
	TCTCCAGTAGCCTGTTTAAA+AGG	-	chr8.2:69051986-69052005	None:intergenic	40.0%
	TCTGAAGAAGCTTACCTATG+AGG	+	chr8.2:69052711-69052730	MS.gene98171:CDS	40.0%
	TGTTAAGGCTCAGAAATCCA+AGG	+	chr8.2:69050462-69050481	MS.gene98171:CDS	40.0%
	TTAGACCAACAAGGACATTG+TGG	+	chr8.2:69051614-69051633	MS.gene98171:intron	40.0%
	TTCGATGATGAATCTGCAGA+GGG	+	chr8.2:69050608-69050627	MS.gene98171:intron	40.0%
!	AAGTGAGTCTGGAATTTCTC+AGG	-	chr8.2:69052456-69052475	None:intergenic	40.0%
!	ACAGTGACAAAAGGTTTGCT+GGG	+	chr8.2:69052231-69052250	MS.gene98171:CDS	40.0%
!	AGTTGAATCCACAACCCTTT+TGG	+	chr8.2:69050914-69050933	MS.gene98171:intron	40.0%
!	GGTTGAATCCTTAACCCTTT+TGG	+	chr8.2:69051014-69051033	MS.gene98171:intron	40.0%
!	TTTTAAACAGGCTACTGGAG+AGG	+	chr8.2:69051985-69052004	MS.gene98171:intron	40.0%
!!	TAATGCTGCTGTTGATGATG+AGG	+	chr8.2:69052771-69052790	MS.gene98171:CDS	40.0%
!!	TGTTCTGAAGACACTTGAGA+TGG	+	chr8.2:69051865-69051884	MS.gene98171:CDS	40.0%
	AAAGACACGGTTTCCAGTAG+TGG	-	chr8.2:69052080-69052099	None:intergenic	45.0%
	AAGTGTCTTCAGAACACGAC+GGG	-	chr8.2:69051861-69051880	None:intergenic	45.0%
	ACTACTGGAAACCGTGTCTT+TGG	+	chr8.2:69052079-69052098	MS.gene98171:CDS	45.0%
	AGAAGCTTACCTATGAGGAG+CGG	+	chr8.2:69052716-69052735	MS.gene98171:CDS	45.0%
	AGGCTCCAAAACAACACAAG+AGG	+	chr8.2:69052583-69052602	MS.gene98171:CDS	45.0%
	ATAGTGTCCGCTAGTATTGC+TGG	+	chr8.2:69051642-69051661	MS.gene98171:CDS	45.0%
	ATGTGACCAGCTTATTGCAC+TGG	+	chr8.2:69051824-69051843	MS.gene98171:intron	45.0%
	CAAGTGTCTTCAGAACACGA+CGG	-	chr8.2:69051862-69051881	None:intergenic	45.0%
	CACAGTGACAAAAGGTTTGC+TGG	+	chr8.2:69052230-69052249	MS.gene98171:CDS	45.0%
	CACCGCAAGTATATCTTTGG+GGG	+	chr8.2:69052290-69052309	MS.gene98171:CDS	45.0%
	CATCATCTTCCATGAAGACC+TGG	+	chr8.2:69051180-69051199	MS.gene98171:intron	45.0%
	CCTACTGAAAGACCAAAGTG+TGG	-	chr8.2:69051705-69051724	None:intergenic	45.0%
	CGGACAACAAATCGGTACTT+GGG	-	chr8.2:69050695-69050714	None:intergenic	45.0%
	CTCACATAACCAGGTCTTCA+TGG	-	chr8.2:69051192-69051211	None:intergenic	45.0%
	GAAGACACTTGAGATGGATG+AGG	+	chr8.2:69051871-69051890	MS.gene98171:CDS	45.0%
	GACAACAAATCGGTACTTGG+GGG	-	chr8.2:69050693-69050712	None:intergenic	45.0%
	GGAAAGAGGGACATATGAGT+TGG	-	chr8.2:69051455-69051474	None:intergenic	45.0%
	GGACAACAAATCGGTACTTG+GGG	-	chr8.2:69050694-69050713	None:intergenic	45.0%
	GGAGTATGAGGGAAATGTTG+AGG	+	chr8.2:69051892-69051911	MS.gene98171:CDS	45.0%
	GGCCTTACAAATTATGCTGC+AGG	+	chr8.2:69051723-69051742	MS.gene98171:CDS	45.0%
	GTAACGCTTGAAGTAAGCCT+TGG	-	chr8.2:69050482-69050501	None:intergenic	45.0%
	GTCCCCCAAAGATATACTTG+CGG	-	chr8.2:69052295-69052314	None:intergenic	45.0%
	TAATCAGGCGAATACGAGCA+CGG	-	chr8.2:69050646-69050665	None:intergenic	45.0%
	TCGGACAACAAATCGGTACT+TGG	-	chr8.2:69050696-69050715	None:intergenic	45.0%
	TCGTATTCGCCTGATTAACC+AGG	+	chr8.2:69050649-69050668	MS.gene98171:CDS	45.0%
	TCTCATGAGCTACCACACTT+TGG	+	chr8.2:69051690-69051709	MS.gene98171:CDS	45.0%
	TTATTGCACTGGACTCCTCT+TGG	+	chr8.2:69051835-69051854	MS.gene98171:CDS	45.0%
	TTGTGCCACAATGTCCTTGT+TGG	-	chr8.2:69051622-69051641	None:intergenic	45.0%
!	AAGAGGGACATATGAGTTGG+AGG	-	chr8.2:69051452-69051471	None:intergenic	45.0%
!	AGAGGGACATATGAGTTGGA+GGG	-	chr8.2:69051451-69051470	None:intergenic	45.0%
!	CCACACTTTGGTCTTTCAGT+AGG	+	chr8.2:69051702-69051721	MS.gene98171:CDS	45.0%
!	GAGATGGATGAGGAGTATGA+GGG	+	chr8.2:69051881-69051900	MS.gene98171:CDS	45.0%
!	GCAAACCTTTTGTCACTGTG+AGG	-	chr8.2:69052230-69052249	None:intergenic	45.0%
!	TGAGATGGATGAGGAGTATG+AGG	+	chr8.2:69051880-69051899	MS.gene98171:CDS	45.0%
!!	AAGGTTTGCTGGGTTTGACA+AGG	+	chr8.2:69052241-69052260	MS.gene98171:CDS	45.0%
!!	GGTCTTGTTAAGACCACTAC+TGG	+	chr8.2:69052064-69052083	MS.gene98171:CDS	45.0%
!!	TAGTCGGGTTGAATCCTCAA+CGG	+	chr8.2:69051140-69051159	MS.gene98171:intron	45.0%
	ACCAAAAGGGTTGTCCGTTG+AGG	-	chr8.2:69051157-69051176	None:intergenic	50.0%
	AGGAGTCCAGTGCAATAAGC+TGG	-	chr8.2:69051833-69051852	None:intergenic	50.0%
	CCTTCTTGTACAGCTCCTCA+AGG	-	chr8.2:69052515-69052534	None:intergenic	50.0%
	CCTTGAGGAGCTGTACAAGA+AGG	+	chr8.2:69052512-69052531	MS.gene98171:CDS	50.0%
	CTCAGGCTCATCTTCAGTCA+AGG	-	chr8.2:69052439-69052458	None:intergenic	50.0%
	GAAGAAAGAGCTCGATGCTG+AGG	+	chr8.2:69052265-69052284	MS.gene98171:CDS	50.0%
	GACCAACATCAAGGAGAGCA+CGG	-	chr8.2:69052048-69052067	None:intergenic	50.0%
	TTCCGTGCTCTCCTTGATGT+TGG	+	chr8.2:69052043-69052062	MS.gene98171:CDS	50.0%
!	AATTGAGGCAGATGGCCTTG+AGG	+	chr8.2:69052497-69052516	MS.gene98171:CDS	50.0%
!	ACATCAAGGAGAGCACGGAA+TGG	-	chr8.2:69052043-69052062	None:intergenic	50.0%
!	CCTTCAAGGCACCAAAGACA+CGG	-	chr8.2:69052093-69052112	None:intergenic	50.0%
!	CTTAGCTTTCCGCTCCTCAT+AGG	-	chr8.2:69052728-69052747	None:intergenic	50.0%
!	TCCTCAACGGACAACCCTTT+TGG	+	chr8.2:69051153-69051172	MS.gene98171:intron	50.0%
!!	TGCTGTTGATGATGAGGACG+AGG	+	chr8.2:69052777-69052796	MS.gene98171:CDS	50.0%
	GATCAGCACGAATTGCAGCG+TGG	-	chr8.2:69052539-69052558	None:intergenic	55.0%
	GGTTTACAGGGAGCCCTAGA+TGG	+	chr8.2:69052191-69052210	MS.gene98171:intron	55.0%
	TGAGGAGCGGAAAGCTAAGC+TGG	+	chr8.2:69052729-69052748	MS.gene98171:CDS	55.0%
	TTACAGGGAGCCCTAGATGG+TGG	+	chr8.2:69052194-69052213	MS.gene98171:intron	55.0%
!!	CCGTGTCTTTGGTGCCTTGA+AGG	+	chr8.2:69052090-69052109	MS.gene98171:CDS	55.0%
	AATGGCCTCCTGGACTCAGC+TGG	-	chr8.2:69052025-69052044	None:intergenic	60.0%
	CAGTTGAGCCAGCTGAGTCC+AGG	+	chr8.2:69052014-69052033	MS.gene98171:CDS	60.0%
	TCAGAACACGACGGGCCAAG+AGG	-	chr8.2:69051853-69051872	None:intergenic	60.0%
	TTGAGCCAGCTGAGTCCAGG+AGG	+	chr8.2:69052017-69052036	MS.gene98171:CDS	60.0%
!	GGGAGCCCTAGATGGTGGTT+TGG	+	chr8.2:69052199-69052218	MS.gene98171:intron	60.0%
!	GAGAGCACGGAATGGCCTCC+TGG	-	chr8.2:69052035-69052054	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	69050210	69052813	69050210	ID=MS.gene98171
chr8.2	mRNA	69050210	69052813	69050210	ID=MS.gene98171.t1;Parent=MS.gene98171
chr8.2	exon	69050210	69050212	69050210	ID=MS.gene98171.t1.exon1;Parent=MS.gene98171.t1
chr8.2	CDS	69050210	69050212	69050210	ID=cds.MS.gene98171.t1;Parent=MS.gene98171.t1
chr8.2	exon	69050457	69050526	69050457	ID=MS.gene98171.t1.exon2;Parent=MS.gene98171.t1
chr8.2	CDS	69050457	69050526	69050457	ID=cds.MS.gene98171.t1;Parent=MS.gene98171.t1
chr8.2	exon	69050627	69050718	69050627	ID=MS.gene98171.t1.exon3;Parent=MS.gene98171.t1
chr8.2	CDS	69050627	69050718	69050627	ID=cds.MS.gene98171.t1;Parent=MS.gene98171.t1
chr8.2	exon	69051618	69051744	69051618	ID=MS.gene98171.t1.exon4;Parent=MS.gene98171.t1
chr8.2	CDS	69051618	69051744	69051618	ID=cds.MS.gene98171.t1;Parent=MS.gene98171.t1
chr8.2	exon	69051834	69051913	69051834	ID=MS.gene98171.t1.exon5;Parent=MS.gene98171.t1
chr8.2	CDS	69051834	69051913	69051834	ID=cds.MS.gene98171.t1;Parent=MS.gene98171.t1
chr8.2	exon	69051995	69052111	69051995	ID=MS.gene98171.t1.exon6;Parent=MS.gene98171.t1
chr8.2	CDS	69051995	69052111	69051995	ID=cds.MS.gene98171.t1;Parent=MS.gene98171.t1
chr8.2	exon	69052200	69052334	69052200	ID=MS.gene98171.t1.exon7;Parent=MS.gene98171.t1
chr8.2	CDS	69052200	69052334	69052200	ID=cds.MS.gene98171.t1;Parent=MS.gene98171.t1
chr8.2	exon	69052435	69052604	69052435	ID=MS.gene98171.t1.exon8;Parent=MS.gene98171.t1
chr8.2	CDS	69052435	69052604	69052435	ID=cds.MS.gene98171.t1;Parent=MS.gene98171.t1
chr8.2	exon	69052705	69052813	69052705	ID=MS.gene98171.t1.exon9;Parent=MS.gene98171.t1
chr8.2	CDS	69052705	69052813	69052705	ID=cds.MS.gene98171.t1;Parent=MS.gene98171.t1

Gene Sequence

>MS.gene98171

ATGGTTCGTTTCACTCTTCCATTTTCTCTTCATTTCGTTCTACCATAGCGTTAATTTCTTAGATCTGTTTATATAATCTTGTTCTTCTCTTTCATTCTGAAATTTAGTACACAGCATTCAGTTTTATTTGTTCGATTTTTGATTAATTATTCATCCTGCTGTGAAATTCAACTATTTCTGTGTCGTAAATGATTTCAAGTCATTGTTTTTAACATCATTTTTCGTTGTTTTGTGTTTTTTGAATTAGGTTTATGTTAAGGCTCAGAAATCCAAGGCTTACTTCAAGCGTTACCAAGTCAAGTTCAAGAGAAGAAGAGGTATATTAGTTATTTCTGTGATTTTTATGATGCATGAATTGAGATTTTTTTTTGTTGACCAAAATGTATGCTGATTATTCATTCGATGATGAATCTGCAGAGGGAAAGACTGATTACCGTGCTCGTATTCGCCTGATTAACCAGGATAAGAACAAGTACAACACCCCCAAGTACCGATTTGTTGTCCGATTTGTATCCTTTTGTCAGCTTATAGTTATGATTTTCATTGATGCACTGGTATTTAAGTTGCTGTCTTGTTTTTTGTTCATTTGAAGACGTTTTTTTTATGTGATTTAACTGGTTAGTATTTTATTTTTTTTAATTAATGTTGATTTTTTATGGTATATCTTAGAAATTGTTAGAAATGCTACTGTATGCTACTGTGGGAGTTGAATCCACAACCCTTTTGGTTTTTTTTGTGTAATTAGTTTTTGATTAGCATTTTTAAGGTATATGTTAGTAATCAATTGTTAGAAATGTTATTGGGGGTTGAATCCTTAACCCTTTTGGTTTTTATCTCAAAGAAGACATTATGTGATAGATATATTTATAATTATCTTAATTGATCGTTGCATTTTTGTGGCATATGTTAGTAATTAATTGTTAGAAATGCTAGTCGGGTTGAATCCTCAACGGACAACCCTTTTGGTTTTCATCATCTTCCATGAAGACCTGGTTATGTGAGATAATTATATCTATCATTATCTTAATTAATTATTGATTTCTTATGGCATATGTTAGTAATTAATTGTTAGAAATGCTAGTGAGGGGAGTTGAATCCACAATCCTTTTGGTTTTTTCTTCAAGGAAGACATGGTTTTATGTGATAATTTTAATTATTTGTTGATTTTGTTAGTGGCACATGTTTGTAGTCAATTGTTTGTAATGCTAGTTTGGCAAATTGAATCAACAACCTTTAATCCCTCCAACTCATATGTCCCTCTTTCCAAATCACCTTATAACTTTTTGATAGCTTATTATGTTATAAATATTTGATTTTGCATGCTGCTTAATCATAGATATCAAGCAAACTATTGTTAGTTGTTATTGTTGGTATTTGTCTGTTATTGTTAAACTTAACTCCTTATTAGACCAACAAGGACATTGTGGCACAAATAGTGTCCGCTAGTATTGCTGGTGATATTGTTCTTGCTGCTGCATATTCTCATGAGCTACCACACTTTGGTCTTTCAGTAGGCCTTACAAATTATGCTGCAGGTAGTTATCCGTTGTTCTCATTTAAATTTAAATTTGTTTTTATCTTTGTGCATTGTATTGTTATTGAATGTATGTTAAAATGTGACCAGCTTATTGCACTGGACTCCTCTTGGCCCGTCGTGTTCTGAAGACACTTGAGATGGATGAGGAGTATGAGGGAAATGTTGAGGTAATTGTGATCTTTTTTATTTTCACTGTCCTATCTAGACACTGTTCTTTGCAAACTAATTAGTTTAATCCTTTTAAACAGGCTACTGGAGAGGATTATTCAGTTGAGCCAGCTGAGTCCAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGTCTTGTTAAGACCACTACTGGAAACCGTGTCTTTGGTGCCTTGAAGGTACTAAAAACATTATATTGCATTACAAATAGTTAATTGATATTTGTTTTTGCTGATTGTTGATTTGAATATTTGTGATGGTTTACAGGGAGCCCTAGATGGTGGTTTGGATATTCCTCACAGTGACAAAAGGTTTGCTGGGTTTGACAAGGAGAAGAAAGAGCTCGATGCTGAGGTTCACCGCAAGTATATCTTTGGGGGACATGTTGCTGCATACATGAAGGCATGAATAAAAAAATTAATCATTTCTGTCTTGTTATTTTTTTGTGTGCGATGCATTCATATTTCCAAAATCTGTGAATAACATTGAATATTATCTGCAGACCTTGACTGAAGATGAGCCTGAGAAATTCCAGACTCACTTTAGTGAATACATCAAGAAAGGAATTGAGGCAGATGGCCTTGAGGAGCTGTACAAGAAGGTCCACGCTGCAATTCGTGCTGATCCTACAATTAAGAAATCAGAGAAGAAGGCTCCAAAACAACACAAGAGGTATTTTTTCCCTTTTATTTCATACTAGAATCTGCTACCTGAGTATTATTTATTACATGAATGAATGAAGATTACTAATTTATTTGTTAATCTTGTGTAGGTATAATCTGAAGAAGCTTACCTATGAGGAGCGGAAAGCTAAGCTGGTTTCACGCTTGTCAGCTCTTAATGCTGCTGTTGATGATGAGGACGAGGATGACGATGAGTGA

Protein sequence

>MS.gene98171.t1

MVYVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVLAAAYSHELPHFGLSVGLTNYAAAYCTGLLLARRVLKTLEMDEEYEGNVEATGEDYSVEPAESRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLDIPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVAAYMKTLTEDEPEKFQTHFSEYIKKGIEADGLEELYKKVHAAIRADPTIKKSEKKAPKQHKRYNLKKLTYEERKAKLVSRLSALNAAVDDEDEDDDE