AlfalfaGEDB | MS.gene59609

M. sativa cultivar XinJiangDaYe / MS.gene59609

KEGG: K02932
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008097 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0019843 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0097159 GO:0110165 GO:1901363 GO:1901564 GO:1901566 GO:1901576
PFAM: PF14204.9 PF17144.7

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59609.t1	XP_013444706.1	97.6	292	7	0	1	292	1	292	5.90E-154	553.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59609.t1	Q8LBI1	84.0	288	46	0	1	288	1	288	4.1e-135	482.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59609.t1	B7FJX5	97.6	292	7	0	1	292	1	292	4.3e-154	553.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049361	MS.gene59609	0.871684	5.67E-67	-1.69E-46
MS.gene050134	MS.gene59609	0.899644	1.62E-77	-1.69E-46
MS.gene050791	MS.gene59609	0.90477	8.67E-80	-1.69E-46
MS.gene050912	MS.gene59609	0.852908	3.39E-61	-1.69E-46
MS.gene051984	MS.gene59609	0.862277	5.68E-64	-1.69E-46
MS.gene052664	MS.gene59609	0.846438	2.17E-59	-1.69E-46
MS.gene053224	MS.gene59609	0.85416	1.48E-61	-1.69E-46
MS.gene055232	MS.gene59609	0.816718	4.79E-52	-1.69E-46
MS.gene057272	MS.gene59609	0.897062	2.02E-76	-1.69E-46
MS.gene057641	MS.gene59609	0.809515	1.82E-50	-1.69E-46
MS.gene057643	MS.gene59609	0.852002	6.14E-61	-1.69E-46
MS.gene060483	MS.gene59609	0.852378	4.80E-61	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene061166	MS.gene59609	PPI
MS.gene59609	MS.gene031484	PPI
MS.gene053448	MS.gene59609	PPI
MS.gene53524	MS.gene59609	PPI
MS.gene059846	MS.gene59609	PPI
MS.gene035396	MS.gene59609	PPI
MS.gene40020	MS.gene59609	PPI
MS.gene59609	MS.gene64512	PPI
MS.gene022752	MS.gene59609	PPI
MS.gene014499	MS.gene59609	PPI
MS.gene013607	MS.gene59609	PPI
MS.gene003693	MS.gene59609	PPI
MS.gene066300	MS.gene59609	PPI
MS.gene59609	MS.gene015586	PPI
MS.gene034931	MS.gene59609	PPI
MS.gene034607	MS.gene59609	PPI
MS.gene39294	MS.gene59609	PPI
MS.gene059880	MS.gene59609	PPI
MS.gene018651	MS.gene59609	PPI
MS.gene069038	MS.gene59609	PPI
MS.gene072782	MS.gene59609	PPI
MS.gene037902	MS.gene59609	PPI
MS.gene59609	MS.gene019309	PPI
MS.gene59609	MS.gene81493	PPI
MS.gene041623	MS.gene59609	PPI
MS.gene43350	MS.gene59609	PPI
MS.gene014498	MS.gene59609	PPI
MS.gene09845	MS.gene59609	PPI
MS.gene95644	MS.gene59609	PPI
MS.gene03059	MS.gene59609	PPI
MS.gene039132	MS.gene59609	PPI
MS.gene95472	MS.gene59609	PPI
MS.gene79721	MS.gene59609	PPI
MS.gene06729	MS.gene59609	PPI
MS.gene08488	MS.gene59609	PPI
MS.gene040601	MS.gene59609	PPI
MS.gene96826	MS.gene59609	PPI
MS.gene59549	MS.gene59609	PPI
MS.gene75537	MS.gene59609	PPI
MS.gene031550	MS.gene59609	PPI
MS.gene018553	MS.gene59609	PPI
MS.gene99779	MS.gene59609	PPI
MS.gene83961	MS.gene59609	PPI
MS.gene59609	MS.gene34149	PPI
MS.gene004705	MS.gene59609	PPI
MS.gene47347	MS.gene59609	PPI
MS.gene060923	MS.gene59609	PPI
MS.gene23437	MS.gene59609	PPI
MS.gene59609	MS.gene000480	PPI
MS.gene45646	MS.gene59609	PPI
MS.gene006753	MS.gene59609	PPI
MS.gene59609	MS.gene90360	PPI
MS.gene06946	MS.gene59609	PPI
MS.gene59609	MS.gene32091	PPI
MS.gene41329	MS.gene59609	PPI
MS.gene059878	MS.gene59609	PPI
MS.gene073150	MS.gene59609	PPI
MS.gene02109	MS.gene59609	PPI
MS.gene59609	MS.gene95471	PPI
MS.gene59609	MS.gene50744	PPI
MS.gene004704	MS.gene59609	PPI
MS.gene92142	MS.gene59609	PPI
MS.gene59609	MS.gene77392	PPI
MS.gene59609	MS.gene96780	PPI
MS.gene59609	MS.gene56525	PPI
MS.gene031406	MS.gene59609	PPI
MS.gene59609	MS.gene74532	PPI
MS.gene064682	MS.gene59609	PPI
MS.gene81068	MS.gene59609	PPI
MS.gene031378	MS.gene59609	PPI
MS.gene46475	MS.gene59609	PPI
MS.gene59609	MS.gene25010	PPI
MS.gene53720	MS.gene59609	PPI
MS.gene59609	MS.gene067072	PPI
MS.gene020215	MS.gene59609	PPI
MS.gene006800	MS.gene59609	PPI
MS.gene59609	MS.gene066301	PPI
MS.gene85984	MS.gene59609	PPI
MS.gene006276	MS.gene59609	PPI
MS.gene066348	MS.gene59609	PPI
MS.gene42324	MS.gene59609	PPI
MS.gene050985	MS.gene59609	PPI
MS.gene59609	MS.gene98171	PPI
MS.gene068341	MS.gene59609	PPI
MS.gene59609	MS.gene69196	PPI
MS.gene32092	MS.gene59609	PPI
MS.gene59609	MS.gene95828	PPI
MS.gene068781	MS.gene59609	PPI
MS.gene39195	MS.gene59609	PPI
MS.gene87309	MS.gene59609	PPI
MS.gene40019	MS.gene59609	PPI
MS.gene59609	MS.gene96949	PPI
MS.gene073893	MS.gene59609	PPI
MS.gene063385	MS.gene59609	PPI
MS.gene59609	MS.gene003314	PPI
MS.gene035194	MS.gene59609	PPI
MS.gene77667	MS.gene59609	PPI
MS.gene91244	MS.gene59609	PPI
MS.gene94588	MS.gene59609	PPI
MS.gene061905	MS.gene59609	PPI
MS.gene045180	MS.gene59609	PPI
MS.gene065189	MS.gene59609	PPI
MS.gene59609	MS.gene23314	PPI
MS.gene49109	MS.gene59609	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59609.t1	MTR_8g028125	97.000	300	9	0	1	300	1	300	0.0	593
MS.gene59609.t1	MTR_3g118030	89.310	290	31	0	1	290	1	290	0.0	535
MS.gene59609.t1	MTR_4g016680	52.903	155	34	1	127	281	8	123	4.60e-44	147
MS.gene59609.t1	MTR_2g435940	69.444	72	17	1	178	244	24	95	1.99e-25	97.8

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59609.t1	AT3G25520	83.793	290	47	1	290	1	290	0.0	508
MS.gene59609.t1	AT3G25520	83.793	290	47	1	290	1	290	0.0	508
MS.gene59609.t1	AT5G39740	83.103	290	49	1	290	1	290	0.0	508
MS.gene59609.t1	AT5G39740	83.103	290	49	1	290	1	290	0.0	508
MS.gene59609.t1	AT3G25520	80.899	178	34	113	290	2	179	3.23e-104	302

Find 83 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAATACCTCTTGTGTTGTTT+TGG	0.227809	8.1:-73652668	None:intergenic
GTTCACCGCAAGTATATCTT+TGG	0.291930	8.1:+73652367	MS.gene59609:CDS
TGTTCTTATCCTGGTTAATC+AGG	0.320790	8.1:-73650739	None:intergenic
TTCTCTGATTTCTTAATTGT+AGG	0.339582	8.1:-73652638	None:intergenic
CACAGTGACAAAAGGTTTGC+TGG	0.351205	8.1:+73652310	MS.gene59609:CDS
TTGTGCCACTATGTCCTTGT+TGG	0.354967	8.1:-73651699	None:intergenic
TGTTGTACTTGTTCTTATCC+TGG	0.370099	8.1:-73650748	None:intergenic
CCGTGTCTTTGGTGCCTTGA+AGG	0.376067	8.1:+73652170	MS.gene59609:CDS
ACTACTGGAAACCGTGTCTT+TGG	0.377680	8.1:+73652159	MS.gene59609:CDS
CTTGGCTTTCCGCTCCTCAT+AGG	0.377823	8.1:-73652805	None:intergenic
TTCACCGCAAGTATATCTTT+GGG	0.381172	8.1:+73652368	MS.gene59609:CDS
GAGAGCACGGAATGGCCTCC+TGG	0.398347	8.1:-73652112	None:intergenic
TTTGAATTAGGTTTATGTTA+AGG	0.401148	8.1:+73650525	MS.gene59609:intron
ATAGTGTCCGCTAGTATTGC+TGG	0.407211	8.1:+73651722	MS.gene59609:CDS
GAATATCCAAACCACCATCT+AGG	0.409965	8.1:-73652285	None:intergenic
TCGGACAACAAATCGGTACT+TGG	0.416359	8.1:-73650774	None:intergenic
TTCTTCTCTTGAACTTGACT+TGG	0.430059	8.1:-73650579	None:intergenic
TGTATTCACTAAAGTGAGTC+TGG	0.437754	8.1:-73652544	None:intergenic
TGAGATGGATGAGGAGTATG+AGG	0.439950	8.1:+73651960	MS.gene59609:CDS
TTATTGCACTGGACTCCTCT+TGG	0.442461	8.1:+73651915	MS.gene59609:CDS
GGTTTACAGGGAGCCCTAGA+TGG	0.454096	8.1:+73652271	MS.gene59609:intron
GTAACGCTTGAAGTAAGCCT+TGG	0.458552	8.1:-73650557	None:intergenic
GGTCTTGTTAAGACCACTAC+TGG	0.466788	8.1:+73652144	MS.gene59609:CDS
GGGAGCCCTAGATGGTGGTT+TGG	0.466900	8.1:+73652279	MS.gene59609:intron
TTCCGTGCTCTCCTTGATGT+TGG	0.475927	8.1:+73652123	MS.gene59609:CDS
AAGTGAGTCTGGAATTTCTC+AGG	0.489225	8.1:-73652533	None:intergenic
CCACACTTTGGTCTTTCAGT+AGG	0.491595	8.1:+73651782	MS.gene59609:CDS
AATTAAGAAATCAGAGAAGC+AGG	0.500284	8.1:+73652643	MS.gene59609:CDS
TACCTGCAGCATAATTTGTA+AGG	0.500398	8.1:-73651805	None:intergenic
GTCAAGTTCAAGAGAAGAAG+AGG	0.501877	8.1:+73650583	MS.gene59609:CDS
GGCCTTACAAATTATGCTGC+AGG	0.502530	8.1:+73651803	MS.gene59609:CDS
CGGACAACAAATCGGTACTT+GGG	0.512041	8.1:-73650773	None:intergenic
TCTGAAGAAGCTTACCTATG+AGG	0.512591	8.1:+73652791	MS.gene59609:CDS
TTTAGTGAATACATCAAGAA+AGG	0.515819	8.1:+73652554	MS.gene59609:CDS
ATACAAATCGGACAACAAAT+CGG	0.520677	8.1:-73650781	None:intergenic
ATATTCCTCACAGTGACAAA+AGG	0.523020	8.1:+73652302	MS.gene59609:CDS
TCTCATGAGCTACCACACTT+TGG	0.524328	8.1:+73651770	MS.gene59609:CDS
GAAGAAAGAGCTCGATGCTG+AGG	0.526853	8.1:+73652345	MS.gene59609:CDS
ACAGTGACAAAAGGTTTGCT+GGG	0.528756	8.1:+73652311	MS.gene59609:CDS
CAGTTGAGCTAGCTGAGTCC+AGG	0.534950	8.1:+73652094	MS.gene59609:CDS
AATATCCAAACCACCATCTA+GGG	0.535350	8.1:-73652284	None:intergenic
CTCAGGCTCATCTTCAGTCA+AGG	0.537919	8.1:-73652516	None:intergenic
TGACAAGCGTGAAACCAACT+TGG	0.545707	8.1:-73652823	None:intergenic
TGTAGGATCAGCACGAATTG+CGG	0.548679	8.1:-73652621	None:intergenic
TCACCGCAAGTATATCTTTG+GGG	0.552159	8.1:+73652369	MS.gene59609:CDS
ATGTGACCAGCTTATTGCAC+TGG	0.552187	8.1:+73651904	MS.gene59609:intron
AAAGACACGGTTTCCAGTAG+TGG	0.561300	8.1:-73652157	None:intergenic
TCGTATTCGCCTGATTAACC+AGG	0.567348	8.1:+73650730	MS.gene59609:CDS
TGAGGAGCGGAAAGCCAAGT+TGG	0.571454	8.1:+73652809	MS.gene59609:CDS
TGTTAAGGCTCAGAAATCCA+AGG	0.572355	8.1:+73650540	MS.gene59609:CDS
TTACAGGGAGCCCTAGATGG+TGG	0.573973	8.1:+73652274	MS.gene59609:intron
ATACATCAAGAAAGGAATTG+AGG	0.575667	8.1:+73652562	MS.gene59609:CDS
AAGTGTCTTCAGAACACGAC+GGG	0.584750	8.1:-73651938	None:intergenic
GAGATGGATGAGGAGTATGA+GGG	0.586795	8.1:+73651961	MS.gene59609:CDS
AAGGTTTGCTGGGTTTGACA+AGG	0.586996	8.1:+73652321	MS.gene59609:CDS
AAGAAAGGAATTGAGGCAGA+TGG	0.591978	8.1:+73652569	MS.gene59609:CDS
CCTTGAGGAGCTGTACAAGA+AGG	0.592833	8.1:+73652592	MS.gene59609:CDS
CACCGCAAGTATATCTTTGG+GGG	0.596512	8.1:+73652370	MS.gene59609:CDS
GAAGACACTTGAGATGGATG+AGG	0.597148	8.1:+73651951	MS.gene59609:CDS
GACCAACATCAAGGAGAGCA+CGG	0.604422	8.1:-73652125	None:intergenic
TAATGCTGCTGTTGATGATG+AGG	0.605286	8.1:+73652851	MS.gene59609:CDS
CCTTCAAGGCACCAAAGACA+CGG	0.609408	8.1:-73652170	None:intergenic
GGACAACAAATCGGTACTTG+GGG	0.611837	8.1:-73650772	None:intergenic
TCTTAACAAGACCAACATCA+AGG	0.618405	8.1:-73652134	None:intergenic
ACATGTTGCTGCATACATGA+AGG	0.618860	8.1:+73652393	MS.gene59609:CDS
TTAGACCAACAAGGACATAG+TGG	0.621773	8.1:+73651694	MS.gene59609:intron
TGCTGTTGATGATGAGGACG+AGG	0.625300	8.1:+73652857	MS.gene59609:CDS
TTGAGCTAGCTGAGTCCAGG+AGG	0.632204	8.1:+73652097	MS.gene59609:CDS
GGAGTATGAGGGAAATGTTG+AGG	0.639543	8.1:+73651972	MS.gene59609:CDS
TGTTCTGAAGACACTTGAGA+TGG	0.640254	8.1:+73651945	MS.gene59609:CDS
CCTTCTTGTACAGCTCCTCA+AGG	0.646258	8.1:-73652592	None:intergenic
AGGCTCCAAAACAACACAAG+AGG	0.648143	8.1:+73652663	MS.gene59609:CDS
TCAGAACACGACGGGCCAAG+AGG	0.649699	8.1:-73651930	None:intergenic
ACATCAAGGAGAGCACGGAA+TGG	0.653230	8.1:-73652120	None:intergenic
AATTGAGGCAGATGGCCTTG+AGG	0.657052	8.1:+73652577	MS.gene59609:CDS
TAATCAGGCGAATACGAGCA+CGG	0.680796	8.1:-73650724	None:intergenic
AACTCCTTATTAGACCAACA+AGG	0.684350	8.1:+73651685	MS.gene59609:intron
AGAAGCTTACCTATGAGGAG+CGG	0.703780	8.1:+73652796	MS.gene59609:CDS
GATCAGCACGAATTGCGGCG+TGG	0.707833	8.1:-73652616	None:intergenic
AATATCACCAGCAATACTAG+CGG	0.722529	8.1:-73651729	None:intergenic
CCTACTGAAAGACCAAAGTG+TGG	0.729262	8.1:-73651782	None:intergenic
GACAACAAATCGGTACTTGG+GGG	0.739465	8.1:-73650771	None:intergenic
CAAGTGTCTTCAGAACACGA+CGG	0.780703	8.1:-73651939	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTAATTATTGATTTCTTA+TGG	+	chr8.1:73651315-73651334	MS.gene59609:intron	10.0%
!!!	TAATTAATGTTGATTTTTTA+TGG	+	chr8.1:73650927-73650946	MS.gene59609:intron	10.0%
!!	TTAAATTTAAATGAGAACAA+GGG	-	chr8.1:73651836-73651855	None:intergenic	15.0%
!!	TTTAAATTTAAATGAGAACA+AGG	-	chr8.1:73651837-73651856	None:intergenic	15.0%
!!!	TTTTTTTTATGTGATTTAAC+TGG	+	chr8.1:73650886-73650905	MS.gene59609:intron	15.0%
!!	AAAAAAAATCTCAATTCATG+AGG	-	chr8.1:73650639-73650658	None:intergenic	20.0%
!!	AATTGTTAGAAATGTTATTG+GGG	+	chr8.1:73651073-73651092	MS.gene59609:intron	20.0%
!!	AGATTCTAGTATGAAATAAA+AGG	-	chr8.1:73652698-73652717	None:intergenic	20.0%
!!	ATTACACAAAAAAAACCAAA+AGG	-	chr8.1:73651013-73651032	None:intergenic	20.0%
!!	CAATTGTTAGAAATGTTATT+GGG	+	chr8.1:73651072-73651091	MS.gene59609:intron	20.0%
!!	GATTCTAGTATGAAATAAAA+GGG	-	chr8.1:73652697-73652716	None:intergenic	20.0%
!!	GCATGTAATAAATAATACTA+AGG	-	chr8.1:73652725-73652744	None:intergenic	20.0%
!!	TAAGCTATCAAAAAGTTATA+AGG	-	chr8.1:73651564-73651583	None:intergenic	20.0%
!!	TCAATTGTTAGAAATGTTAT+TGG	+	chr8.1:73651071-73651090	MS.gene59609:intron	20.0%
!!	TTAATTGTTAAAATGCTAGT+CGG	+	chr8.1:73651204-73651223	MS.gene59609:intron	20.0%
!!	TTACACAAAAAAAACCAAAA+GGG	-	chr8.1:73651012-73651031	None:intergenic	20.0%
!!	TTTGAATTAGGTTTATGTTA+AGG	+	chr8.1:73650525-73650544	MS.gene59609:intron	20.0%
!!!	GTTTTTGATTAGCATTTTTA+AGG	+	chr8.1:73651035-73651054	MS.gene59609:intron	20.0%
!!!	TAAATAATCAGCATACATTT+TGG	-	chr8.1:73650669-73650688	None:intergenic	20.0%
!!!	TGTATTGTGTTTTTTGAATT+AGG	+	chr8.1:73650513-73650532	MS.gene59609:intron	20.0%
!!!	TTAGTTTAATCCTTTTAAAC+AGG	+	chr8.1:73652053-73652072	MS.gene59609:intron	20.0%
!!!	TTATTTGTTGATTTTGTTAG+TGG	+	chr8.1:73651443-73651462	MS.gene59609:intron	20.0%
!!!	TTTATTTGTTAATCTTGTGT+AGG	+	chr8.1:73652763-73652782	MS.gene59609:intron	20.0%
!	AATATTTGTGATGGTTTACA+GGG	+	chr8.1:73652259-73652278	MS.gene59609:intron	25.0%
!	AATTGTTTGTAATGCTAGTT+TGG	+	chr8.1:73651481-73651500	MS.gene59609:intron	25.0%
!	ATTGTTAGAAATGTTATTGG+GGG	+	chr8.1:73651074-73651093	MS.gene59609:intron	25.0%
!	CAAAAAGTTATAAGGTGATT+TGG	-	chr8.1:73651556-73651575	None:intergenic	25.0%
!	GATCTAAGAAATTAAAGCTA+TGG	-	chr8.1:73650332-73650351	None:intergenic	25.0%
!	TAATTGTTAAAATGCTAGTC+GGG	+	chr8.1:73651205-73651224	MS.gene59609:intron	25.0%
!	TATAATTATCTCACATAACC+AGG	-	chr8.1:73651281-73651300	None:intergenic	25.0%
!	TTCTCTGATTTCTTAATTGT+AGG	-	chr8.1:73652641-73652660	None:intergenic	25.0%
!	TTTAGTGAATACATCAAGAA+AGG	+	chr8.1:73652554-73652573	MS.gene59609:CDS	25.0%
!!	CTATTGTTAGTTGTTATTGT+TGG	+	chr8.1:73651638-73651657	MS.gene59609:intron	25.0%
!!	TCAATGTTATTCACAGATTT+TGG	-	chr8.1:73652482-73652501	None:intergenic	25.0%
!!!	CTTTGAGATAAAAACCAAAA+GGG	-	chr8.1:73651112-73651131	None:intergenic	25.0%
!!!	GTTGATTTGAATATTTGTGA+TGG	+	chr8.1:73652250-73652269	MS.gene59609:intron	25.0%
!!!	TAATGTTTTTAGTACCTTCA+AGG	-	chr8.1:73652187-73652206	None:intergenic	25.0%
!!!	TCTTTGAGATAAAAACCAAA+AGG	-	chr8.1:73651113-73651132	None:intergenic	25.0%
	AAAAAAAACCAAAAGGGTTG+TGG	-	chr8.1:73651006-73651025	None:intergenic	30.0%
	AAGAAATGTCAGAATGAAAG+AGG	-	chr8.1:73650375-73650394	None:intergenic	30.0%
	AATTAAGAAATCAGAGAAGC+AGG	+	chr8.1:73652643-73652662	MS.gene59609:CDS	30.0%
	AATTGTTAGAAATGCTAGTG+AGG	+	chr8.1:73651353-73651372	MS.gene59609:intron	30.0%
	AGAAAAAACCAAAAGGATTG+TGG	-	chr8.1:73651389-73651408	None:intergenic	30.0%
	ATACAAATCGGACAACAAAT+CGG	-	chr8.1:73650784-73650803	None:intergenic	30.0%
	ATACATCAAGAAAGGAATTG+AGG	+	chr8.1:73652562-73652581	MS.gene59609:CDS	30.0%
	ATTGTTAGAAATGCTAGTGA+GGG	+	chr8.1:73651354-73651373	MS.gene59609:intron	30.0%
	CATAACTATAAGCTGACAAA+AGG	-	chr8.1:73650807-73650826	None:intergenic	30.0%
	GAAACGAAATGAAGAGAAAA+TGG	-	chr8.1:73650307-73650326	None:intergenic	30.0%
	GAAGATGATGAAAACCAAAA+GGG	-	chr8.1:73651250-73651269	None:intergenic	30.0%
	GAATATTTGTGATGGTTTAC+AGG	+	chr8.1:73652258-73652277	MS.gene59609:intron	30.0%
	GATAAAAACCAAAAGGGTTA+AGG	-	chr8.1:73651106-73651125	None:intergenic	30.0%
	TCCTTGAAGAAAAAACCAAA+AGG	-	chr8.1:73651396-73651415	None:intergenic	30.0%
!	AATTGATCGTTGCATTTTTG+TGG	+	chr8.1:73651168-73651187	MS.gene59609:intron	30.0%
!	TATAAGGTGATTTGGAAAGA+GGG	-	chr8.1:73651548-73651567	None:intergenic	30.0%
!	TATGATTTTCATTGATGCAC+TGG	+	chr8.1:73650823-73650842	MS.gene59609:intron	30.0%
!	TTATAAGGTGATTTGGAAAG+AGG	-	chr8.1:73651549-73651568	None:intergenic	30.0%
!!!	AAATACCTCTTGTGTTGTTT+TGG	-	chr8.1:73652671-73652690	None:intergenic	30.0%
!!!	TCCTTTTGGTTTTTTCTTCA+AGG	+	chr8.1:73651392-73651411	MS.gene59609:intron	30.0%
!!!	TTTTTTCTTCAAGGAAGACA+TGG	+	chr8.1:73651401-73651420	MS.gene59609:intron	30.0%
	AAAACCCATATACGACACAA+AGG	-	chr8.1:73650464-73650483	None:intergenic	35.0%
	AACTCCTTATTAGACCAACA+AGG	+	chr8.1:73651685-73651704	MS.gene59609:intron	35.0%
	AACTTCCTTTGTGTCGTATA+TGG	+	chr8.1:73650456-73650475	MS.gene59609:intron	35.0%
	AATATCACCAGCAATACTAG+CGG	-	chr8.1:73651732-73651751	None:intergenic	35.0%
	AATATCCAAACCACCATCTA+GGG	-	chr8.1:73652287-73652306	None:intergenic	35.0%
	ACTTCCTTTGTGTCGTATAT+GGG	+	chr8.1:73650457-73650476	MS.gene59609:intron	35.0%
	ATATTCCTCACAGTGACAAA+AGG	+	chr8.1:73652302-73652321	MS.gene59609:CDS	35.0%
	GCTGACAAAAGGATACAAAT+CGG	-	chr8.1:73650796-73650815	None:intergenic	35.0%
	GGAAGATGATGAAAACCAAA+AGG	-	chr8.1:73651251-73651270	None:intergenic	35.0%
	TCTTAACAAGACCAACATCA+AGG	-	chr8.1:73652137-73652156	None:intergenic	35.0%
	TGTATTCACTAAAGTGAGTC+TGG	-	chr8.1:73652547-73652566	None:intergenic	35.0%
	TGTTCTTATCCTGGTTAATC+AGG	-	chr8.1:73650742-73650761	None:intergenic	35.0%
	TGTTGTACTTGTTCTTATCC+TGG	-	chr8.1:73650751-73650770	None:intergenic	35.0%
	TTCACCGCAAGTATATCTTT+GGG	+	chr8.1:73652368-73652387	MS.gene59609:CDS	35.0%
	TTCTTCTCTTGAACTTGACT+TGG	-	chr8.1:73650582-73650601	None:intergenic	35.0%
	TTGTTAGAAATGCTAGTGAG+GGG	+	chr8.1:73651355-73651374	MS.gene59609:intron	35.0%
!	AATCCTTTTAAACAGGCTAC+TGG	+	chr8.1:73652060-73652079	MS.gene59609:intron	35.0%
!	AGTTGAATCCACAATCCTTT+TGG	+	chr8.1:73651378-73651397	MS.gene59609:intron	35.0%
!	ATATGAGTTGGAGGGATTAA+AGG	-	chr8.1:73651523-73651542	None:intergenic	35.0%
!	ATGTCCTTGTTGGTCTAATA+AGG	-	chr8.1:73651692-73651711	None:intergenic	35.0%
!	TACCTGCAGCATAATTTGTA+AGG	-	chr8.1:73651808-73651827	None:intergenic	35.0%
	AAGAAAGGAATTGAGGCAGA+TGG	+	chr8.1:73652569-73652588	MS.gene59609:CDS	40.0%
	AATGCTACTGTATGCTACTG+TGG	+	chr8.1:73650971-73650990	MS.gene59609:intron	40.0%
	ACATGTTGCTGCATACATGA+AGG	+	chr8.1:73652393-73652412	MS.gene59609:CDS	40.0%
	ATGCTACTGTATGCTACTGT+GGG	+	chr8.1:73650972-73650991	MS.gene59609:intron	40.0%
	ATTCGATGATGAATCTGCAG+AGG	+	chr8.1:73650688-73650707	MS.gene59609:intron	40.0%
	GAATATCCAAACCACCATCT+AGG	-	chr8.1:73652288-73652307	None:intergenic	40.0%
	GCAAAGAACAGTGTCTAGAT+AGG	-	chr8.1:73652026-73652045	None:intergenic	40.0%
	GTCAAGTTCAAGAGAAGAAG+AGG	+	chr8.1:73650583-73650602	MS.gene59609:CDS	40.0%
	GTTCACCGCAAGTATATCTT+TGG	+	chr8.1:73652367-73652386	MS.gene59609:CDS	40.0%
	TCACCGCAAGTATATCTTTG+GGG	+	chr8.1:73652369-73652388	MS.gene59609:CDS	40.0%
	TCTCCAGTAGCCTGTTTAAA+AGG	-	chr8.1:73652066-73652085	None:intergenic	40.0%
	TCTGAAGAAGCTTACCTATG+AGG	+	chr8.1:73652791-73652810	MS.gene59609:CDS	40.0%
	TGTTAAGGCTCAGAAATCCA+AGG	+	chr8.1:73650540-73650559	MS.gene59609:CDS	40.0%
	TTAGACCAACAAGGACATAG+TGG	+	chr8.1:73651694-73651713	MS.gene59609:intron	40.0%
	TTCGATGATGAATCTGCAGA+GGG	+	chr8.1:73650689-73650708	MS.gene59609:intron	40.0%
!	AAGTGAGTCTGGAATTTCTC+AGG	-	chr8.1:73652536-73652555	None:intergenic	40.0%
!	ACAGTGACAAAAGGTTTGCT+GGG	+	chr8.1:73652311-73652330	MS.gene59609:CDS	40.0%
!	AGTTGAATCCACAACCCTTT+TGG	+	chr8.1:73650995-73651014	MS.gene59609:intron	40.0%
!	GGTTGAATCCTTAACCCTTT+TGG	+	chr8.1:73651095-73651114	MS.gene59609:intron	40.0%
!	TTTTAAACAGGCTACTGGAG+AGG	+	chr8.1:73652065-73652084	MS.gene59609:intron	40.0%
!!	TAATGCTGCTGTTGATGATG+AGG	+	chr8.1:73652851-73652870	MS.gene59609:CDS	40.0%
!!	TGTTCTGAAGACACTTGAGA+TGG	+	chr8.1:73651945-73651964	MS.gene59609:CDS	40.0%
	AAAGACACGGTTTCCAGTAG+TGG	-	chr8.1:73652160-73652179	None:intergenic	45.0%
	AAGTGTCTTCAGAACACGAC+GGG	-	chr8.1:73651941-73651960	None:intergenic	45.0%
	ACTACTGGAAACCGTGTCTT+TGG	+	chr8.1:73652159-73652178	MS.gene59609:CDS	45.0%
	AGAAGCTTACCTATGAGGAG+CGG	+	chr8.1:73652796-73652815	MS.gene59609:CDS	45.0%
	AGGCTCCAAAACAACACAAG+AGG	+	chr8.1:73652663-73652682	MS.gene59609:CDS	45.0%
	ATAGTGTCCGCTAGTATTGC+TGG	+	chr8.1:73651722-73651741	MS.gene59609:CDS	45.0%
	ATGTGACCAGCTTATTGCAC+TGG	+	chr8.1:73651904-73651923	MS.gene59609:intron	45.0%
	CAAGTGTCTTCAGAACACGA+CGG	-	chr8.1:73651942-73651961	None:intergenic	45.0%
	CACAGTGACAAAAGGTTTGC+TGG	+	chr8.1:73652310-73652329	MS.gene59609:CDS	45.0%
	CACCGCAAGTATATCTTTGG+GGG	+	chr8.1:73652370-73652389	MS.gene59609:CDS	45.0%
	CATCATCTTCCATGAAGACC+TGG	+	chr8.1:73651260-73651279	MS.gene59609:intron	45.0%
	CCTACTGAAAGACCAAAGTG+TGG	-	chr8.1:73651785-73651804	None:intergenic	45.0%
	CGGACAACAAATCGGTACTT+GGG	-	chr8.1:73650776-73650795	None:intergenic	45.0%
	CTCACATAACCAGGTCTTCA+TGG	-	chr8.1:73651272-73651291	None:intergenic	45.0%
	GAAGACACTTGAGATGGATG+AGG	+	chr8.1:73651951-73651970	MS.gene59609:CDS	45.0%
	GACAACAAATCGGTACTTGG+GGG	-	chr8.1:73650774-73650793	None:intergenic	45.0%
	GGAAAGAGGGACATATGAGT+TGG	-	chr8.1:73651535-73651554	None:intergenic	45.0%
	GGACAACAAATCGGTACTTG+GGG	-	chr8.1:73650775-73650794	None:intergenic	45.0%
	GGAGTATGAGGGAAATGTTG+AGG	+	chr8.1:73651972-73651991	MS.gene59609:CDS	45.0%
	GGCCTTACAAATTATGCTGC+AGG	+	chr8.1:73651803-73651822	MS.gene59609:CDS	45.0%
	GTAACGCTTGAAGTAAGCCT+TGG	-	chr8.1:73650560-73650579	None:intergenic	45.0%
	GTCCCCCAAAGATATACTTG+CGG	-	chr8.1:73652375-73652394	None:intergenic	45.0%
	TAATCAGGCGAATACGAGCA+CGG	-	chr8.1:73650727-73650746	None:intergenic	45.0%
	TCGGACAACAAATCGGTACT+TGG	-	chr8.1:73650777-73650796	None:intergenic	45.0%
	TCGTATTCGCCTGATTAACC+AGG	+	chr8.1:73650730-73650749	MS.gene59609:CDS	45.0%
	TCTCATGAGCTACCACACTT+TGG	+	chr8.1:73651770-73651789	MS.gene59609:CDS	45.0%
	TGACAAGCGTGAAACCAACT+TGG	-	chr8.1:73652826-73652845	None:intergenic	45.0%
	TGTAGGATCAGCACGAATTG+CGG	-	chr8.1:73652624-73652643	None:intergenic	45.0%
	TTATTGCACTGGACTCCTCT+TGG	+	chr8.1:73651915-73651934	MS.gene59609:CDS	45.0%
!	AAGAGGGACATATGAGTTGG+AGG	-	chr8.1:73651532-73651551	None:intergenic	45.0%
!	AGAGGGACATATGAGTTGGA+GGG	-	chr8.1:73651531-73651550	None:intergenic	45.0%
!	CCACACTTTGGTCTTTCAGT+AGG	+	chr8.1:73651782-73651801	MS.gene59609:CDS	45.0%
!	GAGATGGATGAGGAGTATGA+GGG	+	chr8.1:73651961-73651980	MS.gene59609:CDS	45.0%
!	GCAAACCTTTTGTCACTGTG+AGG	-	chr8.1:73652310-73652329	None:intergenic	45.0%
!	TGAGATGGATGAGGAGTATG+AGG	+	chr8.1:73651960-73651979	MS.gene59609:CDS	45.0%
!	TTGTGCCACTATGTCCTTGT+TGG	-	chr8.1:73651702-73651721	None:intergenic	45.0%
!!	AAGGTTTGCTGGGTTTGACA+AGG	+	chr8.1:73652321-73652340	MS.gene59609:CDS	45.0%
!!	GGTCTTGTTAAGACCACTAC+TGG	+	chr8.1:73652144-73652163	MS.gene59609:CDS	45.0%
!!	TAGTCGGGTTGAATCCACAA+CGG	+	chr8.1:73651220-73651239	MS.gene59609:intron	45.0%
	ACCAAAAGGGTTGTCCGTTG+TGG	-	chr8.1:73651237-73651256	None:intergenic	50.0%
	AGGAGTCCAGTGCAATAAGC+TGG	-	chr8.1:73651913-73651932	None:intergenic	50.0%
	CCTTCTTGTACAGCTCCTCA+AGG	-	chr8.1:73652595-73652614	None:intergenic	50.0%
	CCTTGAGGAGCTGTACAAGA+AGG	+	chr8.1:73652592-73652611	MS.gene59609:CDS	50.0%
	CTCAGGCTCATCTTCAGTCA+AGG	-	chr8.1:73652519-73652538	None:intergenic	50.0%
	GAAGAAAGAGCTCGATGCTG+AGG	+	chr8.1:73652345-73652364	MS.gene59609:CDS	50.0%
	GACCAACATCAAGGAGAGCA+CGG	-	chr8.1:73652128-73652147	None:intergenic	50.0%
	TTCCGTGCTCTCCTTGATGT+TGG	+	chr8.1:73652123-73652142	MS.gene59609:CDS	50.0%
!	AATTGAGGCAGATGGCCTTG+AGG	+	chr8.1:73652577-73652596	MS.gene59609:CDS	50.0%
!	ACATCAAGGAGAGCACGGAA+TGG	-	chr8.1:73652123-73652142	None:intergenic	50.0%
!	CCTTCAAGGCACCAAAGACA+CGG	-	chr8.1:73652173-73652192	None:intergenic	50.0%
!	TCCACAACGGACAACCCTTT+TGG	+	chr8.1:73651233-73651252	MS.gene59609:intron	50.0%
!!	TGCTGTTGATGATGAGGACG+AGG	+	chr8.1:73652857-73652876	MS.gene59609:CDS	50.0%
	CAGTTGAGCTAGCTGAGTCC+AGG	+	chr8.1:73652094-73652113	MS.gene59609:CDS	55.0%
	GGTTTACAGGGAGCCCTAGA+TGG	+	chr8.1:73652271-73652290	MS.gene59609:intron	55.0%
	TGAGGAGCGGAAAGCCAAGT+TGG	+	chr8.1:73652809-73652828	MS.gene59609:CDS	55.0%
	TTACAGGGAGCCCTAGATGG+TGG	+	chr8.1:73652274-73652293	MS.gene59609:intron	55.0%
	TTGAGCTAGCTGAGTCCAGG+AGG	+	chr8.1:73652097-73652116	MS.gene59609:CDS	55.0%
!	CTTGGCTTTCCGCTCCTCAT+AGG	-	chr8.1:73652808-73652827	None:intergenic	55.0%
!!	CCGTGTCTTTGGTGCCTTGA+AGG	+	chr8.1:73652170-73652189	MS.gene59609:CDS	55.0%
	GATCAGCACGAATTGCGGCG+TGG	-	chr8.1:73652619-73652638	None:intergenic	60.0%
	TCAGAACACGACGGGCCAAG+AGG	-	chr8.1:73651933-73651952	None:intergenic	60.0%
!	GGGAGCCCTAGATGGTGGTT+TGG	+	chr8.1:73652279-73652298	MS.gene59609:intron	60.0%
!	GAGAGCACGGAATGGCCTCC+TGG	-	chr8.1:73652115-73652134	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	73650286	73652893	73650286	ID=MS.gene59609
chr8.1	mRNA	73650286	73652893	73650286	ID=MS.gene59609.t1;Parent=MS.gene59609
chr8.1	exon	73650286	73650288	73650286	ID=MS.gene59609.t1.exon1;Parent=MS.gene59609.t1
chr8.1	CDS	73650286	73650288	73650286	ID=cds.MS.gene59609.t1;Parent=MS.gene59609.t1
chr8.1	exon	73650535	73650604	73650535	ID=MS.gene59609.t1.exon2;Parent=MS.gene59609.t1
chr8.1	CDS	73650535	73650604	73650535	ID=cds.MS.gene59609.t1;Parent=MS.gene59609.t1
chr8.1	exon	73650708	73650799	73650708	ID=MS.gene59609.t1.exon3;Parent=MS.gene59609.t1
chr8.1	CDS	73650708	73650799	73650708	ID=cds.MS.gene59609.t1;Parent=MS.gene59609.t1
chr8.1	exon	73651698	73651824	73651698	ID=MS.gene59609.t1.exon4;Parent=MS.gene59609.t1
chr8.1	CDS	73651698	73651824	73651698	ID=cds.MS.gene59609.t1;Parent=MS.gene59609.t1
chr8.1	exon	73651914	73651993	73651914	ID=MS.gene59609.t1.exon5;Parent=MS.gene59609.t1
chr8.1	CDS	73651914	73651993	73651914	ID=cds.MS.gene59609.t1;Parent=MS.gene59609.t1
chr8.1	exon	73652075	73652191	73652075	ID=MS.gene59609.t1.exon6;Parent=MS.gene59609.t1
chr8.1	CDS	73652075	73652191	73652075	ID=cds.MS.gene59609.t1;Parent=MS.gene59609.t1
chr8.1	exon	73652280	73652414	73652280	ID=MS.gene59609.t1.exon7;Parent=MS.gene59609.t1
chr8.1	CDS	73652280	73652414	73652280	ID=cds.MS.gene59609.t1;Parent=MS.gene59609.t1
chr8.1	exon	73652515	73652684	73652515	ID=MS.gene59609.t1.exon8;Parent=MS.gene59609.t1
chr8.1	CDS	73652515	73652684	73652515	ID=cds.MS.gene59609.t1;Parent=MS.gene59609.t1
chr8.1	exon	73652785	73652893	73652785	ID=MS.gene59609.t1.exon9;Parent=MS.gene59609.t1
chr8.1	CDS	73652785	73652893	73652785	ID=cds.MS.gene59609.t1;Parent=MS.gene59609.t1

Gene Sequence

>MS.gene59609

ATGGTTCGTTTCACTCTTCCATTTTCTCTTCATTTCGTTTCTACCATAGCTTTAATTTCTTAGATCTGTATATATAATCTTGTTCTCCTCTTTCATTCTGACATTTCTTACACAACATTCAGTTTTTTATGTTCGATTTTTGATTGATTATTCATTCTGCTGTGAAATTCAACTTCCTTTGTGTCGTATATGGGTTTTAAGAGATTGTTTTTAACATCATTTTTCGTTGTATTGTGTTTTTTGAATTAGGTTTATGTTAAGGCTCAGAAATCCAAGGCTTACTTCAAGCGTTACCAAGTCAAGTTCAAGAGAAGAAGAGGTATATTAGTTAATTTGTAACAATAAGCGTTCCTCATGAATTGAGATTTTTTTTTTGTTGACCAAAATGTATGCTGATTATTTATTCGATGATGAATCTGCAGAGGGAAAGACTGATTACCGTGCTCGTATTCGCCTGATTAACCAGGATAAGAACAAGTACAACACCCCCAAGTACCGATTTGTTGTCCGATTTGTATCCTTTTGTCAGCTTATAGTTATGATTTTCATTGATGCACTGGTATTTAAGTTGCTGTCTTGTTTTTTGTTCATTTGAAGACATTTTTTTTATGTGATTTAACTGGTTAGTATTTTATTTTTTTTAATTAATGTTGATTTTTTATGGTATAAGTTTGAAATTGTTAGAAATGCTACTGTATGCTACTGTGGGAGTTGAATCCACAACCCTTTTGGTTTTTTTTGTGTAATTAGTTTTTGATTAGCATTTTTAAGGTATATGTTAGTAATCAATTGTTAGAAATGTTATTGGGGGTTGAATCCTTAACCCTTTTGGTTTTTATCTCAAAGAAGACATTATGTGATAGATATATTTATAATTATCTTAATTGATCGTTGCATTTTTGTGGCATATGTTAGTAATTAATTGTTAAAATGCTAGTCGGGTTGAATCCACAACGGACAACCCTTTTGGTTTTCATCATCTTCCATGAAGACCTGGTTATGTGAGATAATTATATCTATCATTATCTTAATTAATTATTGATTTCTTATGGCATATGTTAGTAATTAATTGTTAGAAATGCTAGTGAGGGGAGTTGAATCCACAATCCTTTTGGTTTTTTCTTCAAGGAAGACATGGTTTTATGTGATAATTTTAATTATTTGTTGATTTTGTTAGTGGCACATGTTTTTAGTCAATTGTTTGTAATGCTAGTTTGGCAAATTGAATCAACAACCTTTAATCCCTCCAACTCATATGTCCCTCTTTCCAAATCACCTTATAACTTTTTGATAGCTTATTATGTTATAAATATTTGATTTTGCATGCTGCTTAATCATAGATATCAAGCAAACTATTGTTAGTTGTTATTGTTGGTATTTGTCTGTTATTGTTAAACTTAACTCCTTATTAGACCAACAAGGACATAGTGGCACAAATAGTGTCCGCTAGTATTGCTGGTGATATTGTTCTTGCTGCTGCATATTCTCATGAGCTACCACACTTTGGTCTTTCAGTAGGCCTTACAAATTATGCTGCAGGTAGTTATCCCTTGTTCTCATTTAAATTTAAATTTGTTTTTATCTTTGTGCATTGTATTGTTATTGAATGTATGTTAAAATGTGACCAGCTTATTGCACTGGACTCCTCTTGGCCCGTCGTGTTCTGAAGACACTTGAGATGGATGAGGAGTATGAGGGAAATGTTGAGGTAATTGTGATCTTTTTTATTTTCACTGTCCTATCTAGACACTGTTCTTTGCAAACTAATTAGTTTAATCCTTTTAAACAGGCTACTGGAGAGGATTATTCAGTTGAGCTAGCTGAGTCCAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGTCTTGTTAAGACCACTACTGGAAACCGTGTCTTTGGTGCCTTGAAGGTACTAAAAACATTATATTGCATTACAAATAGTTAATTGATATTTGTTTTTGCTGATTGTTGATTTGAATATTTGTGATGGTTTACAGGGAGCCCTAGATGGTGGTTTGGATATTCCTCACAGTGACAAAAGGTTTGCTGGGTTTGACAAGGAGAAGAAAGAGCTCGATGCTGAGGTTCACCGCAAGTATATCTTTGGGGGACATGTTGCTGCATACATGAAGGCATGAATAAAAAAATTAATCATTTCTGTCTTGTTATTTTTTTGTGTGCGATGCATTCATATTTCCAAAATCTGTGAATAACATTGAATATTATCTGCAGACCTTGACTGAAGATGAGCCTGAGAAATTCCAGACTCACTTTAGTGAATACATCAAGAAAGGAATTGAGGCAGATGGCCTTGAGGAGCTGTACAAGAAGGTCCACGCCGCAATTCGTGCTGATCCTACAATTAAGAAATCAGAGAAGCAGGCTCCAAAACAACACAAGAGGTATTTTTTCCCTTTTATTTCATACTAGAATCTGCTACCTTAGTATTATTTATTACATGCATGAATGAAGATTACTAATTTATTTGTTAATCTTGTGTAGGTATAATCTGAAGAAGCTTACCTATGAGGAGCGGAAAGCCAAGTTGGTTTCACGCTTGTCAGCTCTTAATGCTGCTGTTGATGATGAGGACGAGGATGACGATGAGTGA

Protein sequence

>MS.gene59609.t1

MVYVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVLAAAYSHELPHFGLSVGLTNYAAAYCTGLLLARRVLKTLEMDEEYEGNVEATGEDYSVELAESRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLDIPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVAAYMKTLTEDEPEKFQTHFSEYIKKGIEADGLEELYKKVHAAIRADPTIKKSEKQAPKQHKRYNLKKLTYEERKAKLVSRLSALNAAVDDEDEDDDE