AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068898


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068898.t1 MTR_2g044810 95.880 534 22 0 1 534 1 534 0.0 1034
MS.gene068898.t1 MTR_2g044810 70.654 535 86 7 1 534 1 465 0.0 703
MS.gene068898.t1 MTR_4g124520 67.658 538 153 5 1 534 1 521 0.0 696
MS.gene068898.t1 MTR_7g108905 43.119 545 278 10 8 530 18 552 1.63e-146 432
MS.gene068898.t1 MTR_8g042910 43.123 538 255 7 45 534 78 612 1.49e-142 424
MS.gene068898.t1 MTR_7g108900 41.935 527 263 8 42 530 35 556 8.51e-140 416
MS.gene068898.t1 MTR_7g108875 40.675 563 285 9 12 534 11 564 3.32e-139 414
MS.gene068898.t1 MTR_3g010770 42.486 539 259 8 45 534 39 575 1.15e-137 410
MS.gene068898.t1 MTR_2g044880 40.734 545 292 10 1 534 1 525 7.20e-137 407
MS.gene068898.t1 MTR_1g008140 40.484 578 293 14 4 534 34 607 2.71e-135 405
MS.gene068898.t1 MTR_1g088020 42.293 532 263 10 42 534 29 555 2.24e-134 401
MS.gene068898.t1 MTR_1g083520 41.071 560 272 12 1 534 1 528 5.83e-134 399
MS.gene068898.t1 MTR_4g087980 43.255 467 241 7 78 534 64 516 3.48e-133 397
MS.gene068898.t1 MTR_1g054880 39.787 563 285 7 9 534 13 558 9.61e-133 397
MS.gene068898.t1 MTR_7g108890 42.086 537 256 9 42 534 37 562 2.10e-132 397
MS.gene068898.t1 MTR_7g112580 40.481 499 270 8 54 534 53 542 2.81e-131 393
MS.gene068898.t1 MTR_4g025730 42.329 541 273 12 1 534 1 509 1.02e-130 390
MS.gene068898.t1 MTR_1g088225 40.603 564 277 12 6 530 5 549 1.04e-130 392
MS.gene068898.t1 MTR_3g091380 38.272 567 299 10 8 534 42 597 3.41e-130 392
MS.gene068898.t1 MTR_8g023310 42.748 524 268 9 41 534 68 589 4.12e-130 392
MS.gene068898.t1 MTR_4g025690 41.288 528 284 12 10 530 1 509 2.74e-128 384
MS.gene068898.t1 MTR_4g087970 42.137 496 245 10 67 534 36 517 5.49e-128 384
MS.gene068898.t1 MTR_8g104655 40.039 512 279 9 45 534 36 541 5.13e-127 382
MS.gene068898.t1 MTR_8g042900 39.648 512 289 7 39 534 74 581 6.85e-125 378
MS.gene068898.t1 MTR_3g010780 39.096 509 292 7 40 534 70 574 1.47e-124 377
MS.gene068898.t1 MTR_7g050950 41.684 475 257 7 76 534 83 553 4.08e-124 375
MS.gene068898.t1 MTR_7g050870 38.867 512 293 7 38 534 48 554 1.10e-123 374
MS.gene068898.t1 MTR_3g033690 39.208 505 290 10 39 534 30 526 2.40e-121 367
MS.gene068898.t1 MTR_3g008640 38.086 533 307 11 12 534 8 527 1.92e-120 365
MS.gene068898.t1 MTR_7g050980 40.254 472 261 7 78 534 90 555 2.12e-120 365
MS.gene068898.t1 MTR_4g025670 44.700 434 225 6 107 534 65 489 3.70e-120 362
MS.gene068898.t1 MTR_3g008720 38.302 530 310 10 12 534 8 527 7.55e-120 363
MS.gene068898.t1 MTR_3g008700 39.200 500 286 10 45 534 36 527 7.80e-120 363
MS.gene068898.t1 MTR_8g104645 49.555 337 161 3 207 534 36 372 4.05e-119 356
MS.gene068898.t1 MTR_7g053360 37.546 538 303 10 12 534 8 527 1.07e-118 360
MS.gene068898.t1 MTR_4g035980 40.237 507 279 11 45 534 40 539 2.41e-118 360
MS.gene068898.t1 MTR_7g112590 36.268 568 310 11 11 533 22 582 5.13e-118 360
MS.gene068898.t1 MTR_1g083510 35.979 567 314 11 11 533 21 582 4.22e-115 353
MS.gene068898.t1 MTR_1g083490 36.699 515 301 7 38 530 60 571 5.07e-115 353
MS.gene068898.t1 MTR_1g083470 36.468 521 294 9 38 530 55 566 1.94e-114 351
MS.gene068898.t1 MTR_1g083500 36.468 521 294 9 38 530 55 566 1.94e-114 351
MS.gene068898.t1 MTR_4g005170 34.414 555 327 8 10 530 20 571 1.15e-113 351
MS.gene068898.t1 MTR_4g005180 36.117 515 304 7 38 530 42 553 2.29e-112 345
MS.gene068898.t1 MTR_1g086210 37.127 536 290 11 40 534 40 569 2.70e-112 345
MS.gene068898.t1 MTR_0458s0030 57.414 263 112 0 272 534 52 314 7.88e-112 335
MS.gene068898.t1 MTR_1g088040 57.414 263 112 0 272 534 52 314 7.88e-112 335
MS.gene068898.t1 MTR_8g023150 40.115 521 274 14 39 534 75 582 1.56e-107 333
MS.gene068898.t1 MTR_7g110560 36.479 551 311 15 8 533 12 548 3.34e-106 329
MS.gene068898.t1 MTR_1g086190 36.015 547 302 15 24 533 27 562 1.46e-105 327
MS.gene068898.t1 MTR_4g124550 34.799 546 309 9 22 534 62 593 2.08e-103 323
MS.gene068898.t1 MTR_8g104580 35.938 512 267 10 45 534 28 500 4.09e-102 317
MS.gene068898.t1 MTR_8g093460 36.207 522 294 12 39 533 41 550 1.97e-99 311
MS.gene068898.t1 MTR_7g110440 34.528 530 306 10 41 530 42 570 1.85e-98 309
MS.gene068898.t1 MTR_3g095920 35.536 560 316 14 8 533 15 563 2.39e-97 306
MS.gene068898.t1 MTR_2g044660 44.083 338 183 3 199 534 299 632 7.55e-94 299
MS.gene068898.t1 MTR_7g110490 36.797 462 253 8 107 529 108 569 8.62e-94 297
MS.gene068898.t1 MTR_7g110510 36.797 462 253 8 107 529 108 569 8.62e-94 297
MS.gene068898.t1 MTR_2g436040 33.268 508 307 9 44 530 46 542 8.60e-91 290
MS.gene068898.t1 MTR_0618s0020 52.863 227 106 1 309 534 2 228 9.55e-88 270
MS.gene068898.t1 MTR_4g120280 31.346 520 323 8 41 533 59 571 1.76e-87 281
MS.gene068898.t1 MTR_4g120290 32.638 527 319 10 35 533 53 571 2.84e-87 280
MS.gene068898.t1 MTR_8g088610 40.909 330 186 6 207 530 46 372 2.17e-82 261
MS.gene068898.t1 MTR_2g436050 31.021 519 333 9 35 533 50 563 3.11e-82 267
MS.gene068898.t1 MTR_7g110420 34.947 475 258 10 107 530 108 582 5.56e-80 261
MS.gene068898.t1 MTR_5g083620 42.038 314 173 4 226 534 47 356 6.04e-79 252
MS.gene068898.t1 MTR_7g107180 41.987 312 168 5 225 534 7 307 9.49e-79 249
MS.gene068898.t1 MTR_0458s0010 33.523 528 270 15 42 530 29 514 6.17e-74 244
MS.gene068898.t1 MTR_2g105560 39.103 312 175 5 225 534 41 339 1.14e-73 238
MS.gene068898.t1 MTR_7g111560 30.797 552 333 15 8 533 27 555 2.96e-71 238
MS.gene068898.t1 MTR_7g110430 31.897 464 241 10 107 530 108 536 2.66e-70 235
MS.gene068898.t1 MTR_6g088810 38.742 302 160 7 233 523 90 377 2.20e-57 196
MS.gene068898.t1 MTR_8g102380 37.582 306 164 7 233 525 88 379 5.71e-56 192
MS.gene068898.t1 MTR_7g092780 35.691 311 179 6 225 525 90 389 4.11e-55 190
MS.gene068898.t1 MTR_6g012800 34.868 304 175 4 224 517 5 295 1.25e-54 187
MS.gene068898.t1 MTR_1g086540 37.299 311 171 7 225 525 50 346 1.27e-54 187
MS.gene068898.t1 MTR_7g011530 35.197 304 174 5 224 517 5 295 5.57e-53 182
MS.gene068898.t1 MTR_6g024165 34.877 324 179 9 214 523 29 334 3.61e-52 181
MS.gene068898.t1 MTR_7g102600 34.743 331 196 7 200 523 76 393 1.75e-49 176
MS.gene068898.t1 MTR_5g012600 31.546 317 191 6 222 526 60 362 2.18e-49 174
MS.gene068898.t1 MTR_5g095490 35.294 306 172 6 231 524 67 358 7.77e-49 172
MS.gene068898.t1 MTR_8g102380 38.645 251 129 5 233 470 88 326 3.49e-47 167
MS.gene068898.t1 MTR_6g042660 33.333 282 165 6 221 497 33 296 6.09e-47 167
MS.gene068898.t1 MTR_2g039530 37.631 287 147 8 226 501 53 318 2.11e-45 163
MS.gene068898.t1 MTR_1g033050 31.646 316 194 6 219 527 12 312 6.09e-43 155
MS.gene068898.t1 MTR_4g124740 31.731 312 180 10 223 524 52 340 3.78e-42 154
MS.gene068898.t1 MTR_5g083590 30.547 311 166 4 225 534 7 268 1.57e-41 150
MS.gene068898.t1 MTR_6g042690 32.872 289 162 7 221 497 35 303 3.74e-40 148
MS.gene068898.t1 MTR_2g033970 32.588 313 185 8 222 525 53 348 1.23e-38 145
MS.gene068898.t1 MTR_4g074290 30.719 306 194 7 223 523 69 361 2.93e-37 141
MS.gene068898.t1 MTR_5g093970 29.630 324 214 5 201 523 19 329 5.88e-37 140
MS.gene068898.t1 MTR_2g073390 31.250 320 199 9 210 523 57 361 3.05e-36 139
MS.gene068898.t1 MTR_5g088300 30.696 316 196 7 210 523 22 316 2.63e-35 135
MS.gene068898.t1 MTR_0009s0350 30.686 277 176 5 223 494 69 334 4.62e-35 135
MS.gene068898.t1 MTR_0009s0340 30.686 277 176 5 223 494 69 334 4.62e-35 135
MS.gene068898.t1 MTR_8g036225 31.142 289 174 6 221 500 29 301 1.67e-34 133
MS.gene068898.t1 MTR_5g088280 30.696 316 196 7 210 523 24 318 4.22e-33 129
MS.gene068898.t1 MTR_5g088290 30.380 316 198 7 210 523 33 328 1.13e-32 128
MS.gene068898.t1 MTR_2g436600 29.936 314 183 12 222 525 52 338 2.37e-30 121
MS.gene068898.t1 MTR_4g051810 29.206 315 203 6 210 523 22 317 3.68e-30 120
MS.gene068898.t1 MTR_6g025590 38.983 177 95 7 214 379 37 211 2.80e-26 107
MS.gene068898.t1 MTR_2g436070 23.102 303 212 9 10 296 24 321 1.24e-16 82.0
MS.gene068898.t1 MTR_0408s0030 35.052 97 54 1 401 497 36 123 1.93e-16 77.0
MS.gene068898.t1 MTR_6g024200 31.250 160 89 5 365 523 137 276 5.77e-16 79.0
MS.gene068898.t1 MTR_4g130790 30.636 173 105 6 255 418 55 221 3.45e-14 73.2
MS.gene068898.t1 MTR_7g102580 43.023 86 39 2 299 379 73 153 3.67e-13 67.8
MS.gene068898.t1 MTR_7g102570 35.185 108 58 3 384 489 3 100 1.35e-12 65.1
MS.gene068898.t1 MTR_4g035870 28.061 196 125 8 1 187 1 189 1.09e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068898.t1 AT2G26440 65.497 513 160 4 39 534 35 547 0.0 686
MS.gene068898.t1 AT3G43270 45.021 482 239 6 78 534 45 525 1.40e-138 411
MS.gene068898.t1 AT4G02320 45.248 484 238 10 69 530 36 514 1.71e-138 410
MS.gene068898.t1 AT3G05620 39.091 550 290 8 15 534 7 541 1.22e-137 409
MS.gene068898.t1 AT4G02330 40.877 570 282 10 16 534 6 571 6.89e-137 409
MS.gene068898.t1 AT4G33220 48.449 419 194 4 138 534 105 523 6.53e-135 402
MS.gene068898.t1 AT1G02810 38.898 581 284 9 15 534 7 577 1.50e-134 402
MS.gene068898.t1 AT3G10720 38.879 535 280 7 45 534 83 615 1.57e-131 396
MS.gene068898.t1 AT4G02300 41.481 540 282 9 8 534 14 532 6.80e-131 392
MS.gene068898.t1 AT3G49220 39.362 564 301 11 4 534 41 596 3.13e-129 390
MS.gene068898.t1 AT3G49220 39.362 564 301 11 4 534 86 641 1.40e-128 389
MS.gene068898.t1 AT4G33220 48.010 402 187 4 155 534 1 402 1.34e-127 379
MS.gene068898.t1 AT5G53370 40.467 514 285 10 40 534 74 585 2.99e-127 384
MS.gene068898.t1 AT5G53370 40.467 514 285 10 40 534 110 621 7.72e-127 384
MS.gene068898.t1 AT5G04970 40.074 539 268 12 45 534 88 620 1.21e-126 384
MS.gene068898.t1 AT2G47550 43.413 463 226 6 106 534 98 558 7.28e-126 380
MS.gene068898.t1 AT1G53830 40.490 531 266 10 41 530 62 583 1.16e-124 377
MS.gene068898.t1 AT5G51490 41.026 507 274 8 45 534 38 536 6.71e-123 371
MS.gene068898.t1 AT1G11580 42.727 440 240 6 103 532 118 555 2.24e-122 370
MS.gene068898.t1 AT1G11580 42.727 440 240 6 103 532 139 576 2.95e-122 371
MS.gene068898.t1 AT3G60730 40.404 495 254 9 75 534 31 519 4.53e-122 369
MS.gene068898.t1 AT3G10710 40.000 510 274 9 40 534 69 561 4.86e-122 370
MS.gene068898.t1 AT3G14310 39.259 540 276 10 41 534 59 592 8.31e-122 370
MS.gene068898.t1 AT5G51500 41.373 510 272 11 39 530 36 536 2.44e-121 367
MS.gene068898.t1 AT1G23200 39.888 534 260 13 45 534 38 554 2.90e-121 368
MS.gene068898.t1 AT2G43050 39.599 548 285 13 1 534 1 516 2.53e-119 362
MS.gene068898.t1 AT5G27870 34.615 546 329 8 10 534 24 562 1.24e-117 364
MS.gene068898.t1 AT2G45220 39.227 543 283 17 5 534 3 511 2.93e-116 353
MS.gene068898.t1 AT4G00190 41.129 496 251 12 44 530 7 470 6.08e-116 351
MS.gene068898.t1 AT5G04960 37.525 509 287 9 40 531 67 561 2.31e-114 350
MS.gene068898.t1 AT3G05610 34.414 555 322 8 10 534 23 565 2.34e-113 351
MS.gene068898.t1 AT3G47400 38.943 511 287 9 45 534 88 594 6.72e-113 347
MS.gene068898.t1 AT5G49180 36.127 537 302 9 21 530 44 566 9.65e-110 338
MS.gene068898.t1 AT1G53840 36.538 520 291 10 39 528 71 581 2.49e-109 338
MS.gene068898.t1 AT1G11590 41.801 433 237 6 112 534 97 524 5.43e-109 335
MS.gene068898.t1 AT5G20860 37.546 546 307 16 10 534 6 538 7.33e-109 335
MS.gene068898.t1 AT3G59010 43.439 442 220 11 108 534 102 528 1.03e-108 335
MS.gene068898.t1 AT4G03930 43.108 399 215 5 143 534 131 524 1.41e-108 334
MS.gene068898.t1 AT4G33230 36.802 519 296 10 41 534 95 606 2.49e-107 333
MS.gene068898.t1 AT3G10720 52.896 259 122 0 276 534 1 259 5.74e-107 320
MS.gene068898.t1 AT3G27980 43.291 395 216 5 143 534 108 497 9.76e-107 328
MS.gene068898.t1 AT2G26450 36.062 513 299 10 41 534 109 611 8.38e-106 330
MS.gene068898.t1 AT3G06830 36.122 526 290 12 40 530 50 564 1.76e-102 320
MS.gene068898.t1 AT3G14300 37.132 509 289 13 39 523 457 958 4.73e-102 329
MS.gene068898.t1 AT1G11370 54.545 242 110 0 225 466 46 287 1.53e-91 282
MS.gene068898.t1 AT5G09760 35.686 510 296 15 39 522 43 546 7.00e-90 286
MS.gene068898.t1 AT5G09760 35.686 510 296 15 39 522 69 572 1.56e-89 286
MS.gene068898.t1 AT5G64640 34.357 521 303 13 38 527 90 602 1.43e-88 285
MS.gene068898.t1 AT5G20860 34.667 525 281 15 10 513 6 489 2.19e-88 281
MS.gene068898.t1 AT4G15980 45.130 308 168 1 225 531 392 699 1.09e-85 280
MS.gene068898.t1 AT4G15980 45.130 308 168 1 225 531 402 709 2.01e-85 279
MS.gene068898.t1 AT3G62170 41.667 312 178 3 226 534 278 588 1.21e-76 253
MS.gene068898.t1 AT2G47040 42.857 315 172 4 225 534 284 595 9.81e-75 248
MS.gene068898.t1 AT2G47030 40.635 315 179 4 225 534 277 588 3.57e-73 244
MS.gene068898.t1 AT3G29090 36.943 314 172 6 223 523 5 305 1.13e-56 192
MS.gene068898.t1 AT1G05310 35.873 315 181 5 220 524 86 389 5.85e-56 192
MS.gene068898.t1 AT2G36710 35.976 328 190 6 208 528 76 390 5.04e-55 191
MS.gene068898.t1 AT5G19730 36.964 303 166 6 233 524 94 382 1.39e-54 189
MS.gene068898.t1 AT2G21610 35.526 304 173 8 224 524 50 333 1.32e-49 174
MS.gene068898.t1 AT2G21610 35.526 304 173 8 224 524 55 338 1.70e-49 174
MS.gene068898.t1 AT5G47500 31.402 328 192 7 208 523 51 357 2.64e-48 171
MS.gene068898.t1 AT3G17060 33.441 311 181 6 222 523 43 336 3.84e-48 170
MS.gene068898.t1 AT2G36700 34.098 305 184 5 224 523 41 333 1.06e-47 169
MS.gene068898.t1 AT5G55590 34.395 314 180 6 223 524 80 379 7.35e-47 168
MS.gene068898.t1 AT5G07430 31.832 333 205 7 195 523 41 355 3.93e-44 160
MS.gene068898.t1 AT1G44980 43.386 189 101 1 207 389 54 242 1.96e-41 149
MS.gene068898.t1 AT5G55590 34.733 262 147 5 223 472 80 329 2.09e-41 152
MS.gene068898.t1 AT3G24130 30.408 319 196 6 222 529 31 334 7.44e-41 150
MS.gene068898.t1 AT5G18990 32.881 295 171 8 216 498 21 300 4.43e-38 143
MS.gene068898.t1 AT5G07420 30.820 305 193 5 223 523 65 355 1.06e-35 137
MS.gene068898.t1 AT5G26810 32.416 327 187 8 216 523 22 333 1.35e-35 136
MS.gene068898.t1 AT5G61680 30.909 330 199 11 201 523 51 358 2.23e-35 136
MS.gene068898.t1 AT1G69940 29.503 322 204 9 208 523 51 355 8.63e-35 134
MS.gene068898.t1 AT5G07410 29.503 322 204 9 208 523 51 355 1.57e-34 134
MS.gene068898.t1 AT2G19150 29.430 316 200 9 223 530 39 339 6.87e-32 126
MS.gene068898.t1 AT2G19150 31.890 254 152 9 223 468 39 279 3.83e-29 117
MS.gene068898.t1 AT3G49220 30.976 297 171 10 40 313 131 416 6.49e-28 116
MS.gene068898.t1 AT2G47280 28.065 310 195 7 225 523 35 327 1.41e-27 114
MS.gene068898.t1 AT2G47670 30.286 175 110 4 28 191 31 204 8.70e-13 68.2
MS.gene068898.t1 AT5G62360 31.646 158 99 5 41 191 44 199 9.03e-11 62.0

Find 85 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTAACCAAACTATTATT+TGG 0.162094 2.1:+46109678 None:intergenic
GGGACAATAGATTTCATATT+TGG 0.171421 2.1:-46108350 MS.gene068898:CDS
TATGGTGAATATGAAAATTA+TGG 0.192417 2.1:-46108023 MS.gene068898:CDS
GATGGTCTTGATTCTGCTTC+TGG 0.229635 2.1:-46109948 MS.gene068898:CDS
TAGCTATAATTGAACAGTTT+TGG 0.236125 2.1:+46108207 None:intergenic
GATGTTTGGGTTTATGTTTA+TGG 0.267812 2.1:+46110226 None:intergenic
ATCGCGAATGCGACATTTAC+GGG 0.267997 2.1:-46108370 MS.gene068898:CDS
AGAAGGAAGTTTATGATGTT+TGG 0.270843 2.1:+46110212 None:intergenic
AGTGTTTCTGAGTTTATTAT+TGG 0.272877 2.1:-46107924 MS.gene068898:CDS
ATGAGTTGAAACAAAGTTTA+GGG 0.273837 2.1:+46110264 None:intergenic
AATGAGTTGAAACAAAGTTT+AGG 0.277122 2.1:+46110263 None:intergenic
ATTAGATAGCTTTGTGGTTT+CGG 0.291234 2.1:+46110166 None:intergenic
TTTGTTCGAGGAACGGATTC+CGG 0.293719 2.1:+46110034 None:intergenic
CTTTGCTCCAAATAATAGTT+TGG 0.297100 2.1:-46109685 MS.gene068898:CDS
TGGGTTTATGTTTATGGATA+TGG 0.300515 2.1:+46110232 None:intergenic
ACTTTCAGATCTGCAACTTT+AGG 0.311138 2.1:-46109519 MS.gene068898:intron
GAAGGAAGTTTATGATGTTT+GGG 0.337339 2.1:+46110213 None:intergenic
TATCGCGAATGCGACATTTA+CGG 0.340554 2.1:-46108371 MS.gene068898:CDS
ATGGATTGGTTATCATTTGA+TGG 0.354450 2.1:-46107970 MS.gene068898:CDS
GATACAACTAGCATTTCATT+TGG 0.363269 2.1:+46109753 None:intergenic
ATAATAGAATTCACAAGAAC+TGG 0.368158 2.1:+46109915 None:intergenic
GAAATTCCCGTGTCTTCATC+GGG 0.370948 2.1:+46108233 None:intergenic
ACCAAAAGGGTTGGACAAAA+TGG 0.374758 2.1:-46108076 MS.gene068898:CDS
ACCTGAGCCTTCAAATCAAA+AGG 0.410993 2.1:-46109841 MS.gene068898:CDS
GCAACTGCTTGATGTTTCTC+TGG 0.415712 2.1:+46108485 None:intergenic
AGTTTATTATTGGTGATCAA+TGG 0.423850 2.1:-46107914 MS.gene068898:CDS
ACTTCAGTTCCTTATGATGA+TGG 0.435256 2.1:-46107882 MS.gene068898:CDS
TGAAATTCCCGTGTCTTCAT+CGG 0.443371 2.1:+46108232 None:intergenic
GCTTTATTCGAACTCTAGTA+AGG 0.443625 2.1:-46108177 MS.gene068898:CDS
ATAGTTATTTATGTTAAAGA+AGG 0.446972 2.1:-46109657 MS.gene068898:CDS
ATGGTCAAATGATCAAGGTT+TGG 0.447423 2.1:-46108057 MS.gene068898:CDS
CCGTTATAACCGCGCAATCA+CGG 0.449430 2.1:-46108262 MS.gene068898:CDS
CGTTATAACCGCGCAATCAC+GGG 0.463595 2.1:-46108261 MS.gene068898:CDS
CTCCAAATAATAGTTTGGTT+AGG 0.464459 2.1:-46109680 MS.gene068898:CDS
TGATGAGGTTGTGGATGTGT+TGG 0.468004 2.1:+46110340 None:intergenic
AGATTGATAATCGTGTTGAA+TGG 0.472876 2.1:-46107989 MS.gene068898:CDS
CCGTGATTGCGCGGTTATAA+CGG 0.474218 2.1:+46108262 None:intergenic
ACAAAATGGTCAAATGATCA+AGG 0.474989 2.1:-46108062 MS.gene068898:CDS
TAGTTATTTATGTTAAAGAA+GGG 0.479130 2.1:-46109656 MS.gene068898:CDS
TATCAAATTCCATCATCATA+AGG 0.481002 2.1:+46107873 None:intergenic
TTGAAACAAAGTTTAGGGTA+TGG 0.481564 2.1:+46110269 None:intergenic
CTAGTTGAAGTGAATGAAGA+AGG 0.483535 2.1:+46110195 None:intergenic
AGTAAGGTCAAAAGTTACCT+TGG 0.489830 2.1:-46108161 MS.gene068898:CDS
GTTGTATCTGCAGATGGAAG+TGG 0.497219 2.1:-46109738 MS.gene068898:CDS
ACGGTAAATTGACCAGGTAA+TGG 0.499045 2.1:+46108281 None:intergenic
AGAAGAGGATTGTAAAGAGA+AGG 0.502018 2.1:+46110384 None:intergenic
GGTATTGAATGATGAGGTTG+TGG 0.502841 2.1:+46110331 None:intergenic
TCATTGAAAAGATCATTATC+CGG 0.503450 2.1:-46110053 MS.gene068898:CDS
AGGATCAATTCAAGACTGTA+AGG 0.506639 2.1:-46110099 MS.gene068898:CDS
GTAAGGTCAAAAGTTACCTT+GGG 0.507111 2.1:-46108160 MS.gene068898:CDS
GAAAAGATTAGATAGCTTTG+TGG 0.508755 2.1:+46110160 None:intergenic
AAAACTAACATTGTGATGCT+TGG 0.522551 2.1:-46109600 MS.gene068898:CDS
GATAATCGTGTTGAATGGAT+TGG 0.526982 2.1:-46107984 MS.gene068898:CDS
GAGGTAATGTGAGTGAGAAG+AGG 0.527927 2.1:+46110369 None:intergenic
GGTAACAGAAGTGTTGTTGA+TGG 0.535416 2.1:-46109549 MS.gene068898:CDS
CGATTATCAATCTTTGAACC+AGG 0.546156 2.1:+46107999 None:intergenic
AAAGTTACCTTGGGAGGCCA+TGG 0.549483 2.1:-46108151 MS.gene068898:CDS
AAACTGTTCAATTATAGCTA+CGG 0.566105 2.1:-46108204 MS.gene068898:CDS
AACATTGTGATGCTTGGTGA+TGG 0.570666 2.1:-46109594 MS.gene068898:CDS
TAAAGTTGCAGATCTGAAAG+TGG 0.573525 2.1:+46109521 None:intergenic
TGTTGGTTAGGGCTGCACTA+AGG 0.574967 2.1:+46109985 None:intergenic
CCTGAGCCTTCAAATCAAAA+GGG 0.575156 2.1:-46109840 MS.gene068898:CDS
ATAGCAATTGAGAACAGAGC+TGG 0.580889 2.1:-46108509 MS.gene068898:CDS
GTGGATGTGTTGGTTTGAAG+AGG 0.583309 2.1:+46110350 None:intergenic
TTACCTTGGGAGGCCATGGA+GGG 0.591577 2.1:-46108147 MS.gene068898:CDS
AGTGAACATAAAGTGTGTCT+TGG 0.595293 2.1:+46108408 None:intergenic
ACAGAAGTGTTGTTGATGGA+TGG 0.596459 2.1:-46109545 MS.gene068898:CDS
GATGATGAGTTTGTGAGATG+AGG 0.596471 2.1:+46110406 None:intergenic
AGTTATTTATGTTAAAGAAG+GGG 0.596580 2.1:-46109655 MS.gene068898:CDS
ATGCTAGTTGTATCTGCAGA+TGG 0.599555 2.1:-46109744 MS.gene068898:CDS
GTATCAAGAATGCCATTACC+TGG 0.603055 2.1:-46108293 MS.gene068898:CDS
AAACCCTCCATGGCCTCCCA+AGG 0.605902 2.1:+46108144 None:intergenic
GTTACCTTGGGAGGCCATGG+AGG 0.608757 2.1:-46108148 MS.gene068898:CDS
GGATAACCCCGATGAAGACA+CGG 0.612623 2.1:-46108240 MS.gene068898:CDS
AGGTCAAAAGTTACCTTGGG+AGG 0.613998 2.1:-46108157 MS.gene068898:CDS
TATTCGATGTTCCAACGTCG+TGG 0.623832 2.1:+46110138 None:intergenic
AGTGATGCTACTGTGATCAC+TGG 0.625370 2.1:-46109570 MS.gene068898:CDS
TTTGTTGGTATTGAATGATG+AGG 0.627640 2.1:+46110325 None:intergenic
GGGGTTATCCCGTGATTGCG+CGG 0.637925 2.1:+46108253 None:intergenic
GATAACCCCGATGAAGACAC+GGG 0.639264 2.1:-46108239 MS.gene068898:CDS
GAATATGAAAATTATGGACC+TGG 0.647894 2.1:-46108017 MS.gene068898:CDS
GTTATAACGGTAAATTGACC+AGG 0.666136 2.1:+46108275 None:intergenic
AAATTCCCGTGTCTTCATCG+GGG 0.689629 2.1:+46108234 None:intergenic
GCATTCTTGTAATACTACTG+CGG 0.701105 2.1:+46108322 None:intergenic
AATATCGTAGAGAAACAACG+AGG 0.837126 2.1:-46110119 MS.gene068898:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATAATATGAAAAGA+GGG + chr2.1:46109284-46109303 None:intergenic 10.0%
!! TAAAATTATAATATGAAAAG+AGG + chr2.1:46109285-46109304 None:intergenic 10.0%
!! TTAAAAAAACTAAAGATTAT+GGG - chr2.1:46109594-46109613 MS.gene068898:CDS 10.0%
!!! TCATATTATAATTTTATTCT+GGG - chr2.1:46109289-46109308 MS.gene068898:intron 10.0%
!!! TTCATATTATAATTTTATTC+TGG - chr2.1:46109288-46109307 MS.gene068898:intron 10.0%
!!! TTTTAAAATTGATTTTGTTT+TGG - chr2.1:46108957-46108976 MS.gene068898:intron 10.0%
!! ATAAGACTAAATATAATAAC+TGG + chr2.1:46109335-46109354 None:intergenic 15.0%
!! ATAGTTATTTATGTTAAAGA+AGG - chr2.1:46108631-46108650 MS.gene068898:intron 15.0%
!! GTTAAAAAAACTAAAGATTA+TGG - chr2.1:46109593-46109612 MS.gene068898:CDS 15.0%
!! TAAAACTAATTCTTAGAATT+TGG - chr2.1:46109199-46109218 MS.gene068898:intron 15.0%
!! TAGTTAAAAAAAATTGTCTT+TGG - chr2.1:46109084-46109103 MS.gene068898:intron 15.0%
!! TAGTTATTTATGTTAAAGAA+GGG - chr2.1:46108632-46108651 MS.gene068898:intron 15.0%
!!! CATATAAATTTCTTTATTTC+AGG - chr2.1:46109121-46109140 MS.gene068898:intron 15.0%
!! ACAAATACAATCTTAGAATT+TGG - chr2.1:46109439-46109458 MS.gene068898:intron 20.0%
!! AGTTATTTATGTTAAAGAAG+GGG - chr2.1:46108633-46108652 MS.gene068898:intron 20.0%
!! ATATAGATGTGTATGATTAT+TGG - chr2.1:46109001-46109020 MS.gene068898:intron 20.0%
!! TATGGTGAATATGAAAATTA+TGG - chr2.1:46110265-46110284 MS.gene068898:CDS 20.0%
!! TCTTATATTTCATCCAATTT+AGG - chr2.1:46109349-46109368 MS.gene068898:intron 20.0%
!! TTTACCATCAAATAAAGATT+GGG + chr2.1:46109044-46109063 None:intergenic 20.0%
!!! ACAATGTTAGTTTTATAACT+TGG + chr2.1:46108682-46108701 None:intergenic 20.0%
!!! TAATTCTTAGAATTTGGTTT+GGG - chr2.1:46109205-46109224 MS.gene068898:intron 20.0%
!!! TGTTTTGCATAAAGATTTTA+AGG + chr2.1:46107996-46108015 None:intergenic 20.0%
!!! TTTTACAAATGTGCAATTTA+TGG - chr2.1:46109854-46109873 MS.gene068898:CDS 20.0%
!!! TTTTACCATCAAATAAAGAT+TGG + chr2.1:46109045-46109064 None:intergenic 20.0%
! AAAAATCAACTTCTCCAAAA+TGG - chr2.1:46108479-46108498 MS.gene068898:CDS 25.0%
! AAACTGTTCAATTATAGCTA+CGG - chr2.1:46110084-46110103 MS.gene068898:CDS 25.0%
! AAAGACAAAACCAAGAAAAA+AGG + chr2.1:46108811-46108830 None:intergenic 25.0%
! AACAAAAACACATGTTTAGA+TGG - chr2.1:46108322-46108341 MS.gene068898:CDS 25.0%
! AAGACAAAACCAAGAAAAAA+GGG + chr2.1:46108810-46108829 None:intergenic 25.0%
! ATAATAGAATTCACAAGAAC+TGG + chr2.1:46108376-46108395 None:intergenic 25.0%
! ATCCTAACCAAACTATTATT+TGG + chr2.1:46108613-46108632 None:intergenic 25.0%
! CTAATTCTTAGAATTTGGTT+TGG - chr2.1:46109204-46109223 MS.gene068898:intron 25.0%
! GTTATCAAAAAGCTTAGATT+TGG - chr2.1:46108501-46108520 MS.gene068898:CDS 25.0%
! TCATTGAAAAGATCATTATC+CGG - chr2.1:46108235-46108254 MS.gene068898:CDS 25.0%
! TTATATGGGCCAATAAATAT+CGG - chr2.1:46109410-46109429 MS.gene068898:intron 25.0%
! TTTATTGGCCCATATAATAT+CGG + chr2.1:46109407-46109426 None:intergenic 25.0%
!! AATATGAAAAGAGGGTATAT+TGG + chr2.1:46109276-46109295 None:intergenic 25.0%
!! AATGAGTTGAAACAAAGTTT+AGG + chr2.1:46108028-46108047 None:intergenic 25.0%
!! AGTGTTTCTGAGTTTATTAT+TGG - chr2.1:46110364-46110383 MS.gene068898:CDS 25.0%
!! AGTTTATTATTGGTGATCAA+TGG - chr2.1:46110374-46110393 MS.gene068898:CDS 25.0%
!! ATGAGTTGAAACAAAGTTTA+GGG + chr2.1:46108027-46108046 None:intergenic 25.0%
!! GATGATTTTATTGACCAAAA+GGG - chr2.1:46110199-46110218 MS.gene068898:CDS 25.0%
!! TAGCTATAATTGAACAGTTT+TGG + chr2.1:46110084-46110103 None:intergenic 25.0%
!! TGATGATTTTATTGACCAAA+AGG - chr2.1:46110198-46110217 MS.gene068898:CDS 25.0%
!! TTTTCTTTACCCTTTTTTCT+TGG - chr2.1:46108798-46108817 MS.gene068898:intron 25.0%
!!! AAGCTTTTTGATAACCATTT+TGG + chr2.1:46108496-46108515 None:intergenic 25.0%
!!! ATCTAAACATGTGTTTTTGT+TGG + chr2.1:46108323-46108342 None:intergenic 25.0%
AAAACTAACATTGTGATGCT+TGG - chr2.1:46108688-46108707 MS.gene068898:intron 30.0%
ACAAAATGGTCAAATGATCA+AGG - chr2.1:46110226-46110245 MS.gene068898:CDS 30.0%
AGAAGGAAGTTTATGATGTT+TGG + chr2.1:46108079-46108098 None:intergenic 30.0%
CTCCAAATAATAGTTTGGTT+AGG - chr2.1:46108608-46108627 MS.gene068898:intron 30.0%
CTTTGCTCCAAATAATAGTT+TGG - chr2.1:46108603-46108622 MS.gene068898:intron 30.0%
GAAGGAAGTTTATGATGTTT+GGG + chr2.1:46108078-46108097 None:intergenic 30.0%
GAATATGAAAATTATGGACC+TGG - chr2.1:46110271-46110290 MS.gene068898:CDS 30.0%
GATACAACTAGCATTTCATT+TGG + chr2.1:46108538-46108557 None:intergenic 30.0%
GGGACAATAGATTTCATATT+TGG - chr2.1:46109938-46109957 MS.gene068898:CDS 30.0%
TGGGTTTATGTTTATGGATA+TGG + chr2.1:46108059-46108078 None:intergenic 30.0%
! AGATTGATAATCGTGTTGAA+TGG - chr2.1:46110299-46110318 MS.gene068898:CDS 30.0%
! ATTTTATTGACCAAAAGGGT+TGG - chr2.1:46110203-46110222 MS.gene068898:CDS 30.0%
! GAAAAGATTAGATAGCTTTG+TGG + chr2.1:46108131-46108150 None:intergenic 30.0%
! GATGTTTGGGTTTATGTTTA+TGG + chr2.1:46108065-46108084 None:intergenic 30.0%
! TGTTCCCAATCTTTATTTGA+TGG - chr2.1:46109037-46109056 MS.gene068898:intron 30.0%
! TTGAAACAAAGTTTAGGGTA+TGG + chr2.1:46108022-46108041 None:intergenic 30.0%
! TTTGTTGGTATTGAATGATG+AGG + chr2.1:46107966-46107985 None:intergenic 30.0%
!! AACATGTGTTTTTGTTGGTT+AGG + chr2.1:46108318-46108337 None:intergenic 30.0%
!! ACATGTGTTTTTGTTGGTTA+GGG + chr2.1:46108317-46108336 None:intergenic 30.0%
!! ATGGATTGGTTATCATTTGA+TGG - chr2.1:46110318-46110337 MS.gene068898:CDS 30.0%
!! ATTAGATAGCTTTGTGGTTT+CGG + chr2.1:46108125-46108144 None:intergenic 30.0%
!! CTCTTTTCAATTTTTCGACT+TGG - chr2.1:46109541-46109560 MS.gene068898:CDS 30.0%
!! GGTTTGGATACATTGTTTTA+TGG - chr2.1:46110247-46110266 MS.gene068898:CDS 30.0%
!! TTTCATTTTTCAGCTGTATC+TGG - chr2.1:46109734-46109753 MS.gene068898:CDS 30.0%
!! TTTTAAGGAACTGAGTTTGT+TGG + chr2.1:46107981-46108000 None:intergenic 30.0%
!!! TTGTAACCCTTTTGATTTGA+AGG + chr2.1:46108457-46108476 None:intergenic 30.0%
!!! TTTGGTTTGGGATTTTTACA+AGG - chr2.1:46109217-46109236 MS.gene068898:intron 30.0%
AATATCGTAGAGAAACAACG+AGG - chr2.1:46108169-46108188 MS.gene068898:CDS 35.0%
ACAAAGCACAGAAAAATCCA+AGG + chr2.1:46108839-46108858 None:intergenic 35.0%
ACTTCAGTTCCTTATGATGA+TGG - chr2.1:46110406-46110425 MS.gene068898:CDS 35.0%
ACTTTCAGATCTGCAACTTT+AGG - chr2.1:46108769-46108788 MS.gene068898:intron 35.0%
AGAAGAGGATTGTAAAGAGA+AGG + chr2.1:46107907-46107926 None:intergenic 35.0%
AGGATCAATTCAAGACTGTA+AGG - chr2.1:46108189-46108208 MS.gene068898:CDS 35.0%
AGTAAGGTCAAAAGTTACCT+TGG - chr2.1:46110127-46110146 MS.gene068898:CDS 35.0%
AGTGAACATAAAGTGTGTCT+TGG + chr2.1:46109883-46109902 None:intergenic 35.0%
ATGGTCAAATGATCAAGGTT+TGG - chr2.1:46110231-46110250 MS.gene068898:CDS 35.0%
CGATTATCAATCTTTGAACC+AGG + chr2.1:46110292-46110311 None:intergenic 35.0%
CTAGTTGAAGTGAATGAAGA+AGG + chr2.1:46108096-46108115 None:intergenic 35.0%
CTGACCTACCGATATTATAT+GGG - chr2.1:46109396-46109415 MS.gene068898:intron 35.0%
GATAATCGTGTTGAATGGAT+TGG - chr2.1:46110304-46110323 MS.gene068898:CDS 35.0%
GATGTACGAGAATCCTAAAT+TGG + chr2.1:46109365-46109384 None:intergenic 35.0%
GCATTCTTGTAATACTACTG+CGG + chr2.1:46109969-46109988 None:intergenic 35.0%
GGTGACATTACAATAAACGT+TGG - chr2.1:46109635-46109654 MS.gene068898:CDS 35.0%
GTAAGGTCAAAAGTTACCTT+GGG - chr2.1:46110128-46110147 MS.gene068898:CDS 35.0%
GTTATAACGGTAAATTGACC+AGG + chr2.1:46110016-46110035 None:intergenic 35.0%
TAAAGTTGCAGATCTGAAAG+TGG + chr2.1:46108770-46108789 None:intergenic 35.0%
TGACTGTCAATTTGGAAACA+TGG + chr2.1:46109696-46109715 None:intergenic 35.0%
TGTGCCTATCCGATATTTAT+TGG + chr2.1:46109422-46109441 None:intergenic 35.0%
TTATCACGTGACTGTCAATT+TGG + chr2.1:46109704-46109723 None:intergenic 35.0%
! ACAAGGTGGATATCTTTTCA+TGG - chr2.1:46109234-46109253 MS.gene068898:intron 35.0%
! AGCTATGTTTCTTTTGTTCG+AGG + chr2.1:46108269-46108288 None:intergenic 35.0%
! GCTTTATTCGAACTCTAGTA+AGG - chr2.1:46110111-46110130 MS.gene068898:CDS 35.0%
! TGTTTCTTTTGTTCGAGGAA+CGG + chr2.1:46108264-46108283 None:intergenic 35.0%
!! GGTTTTGTCTTTTACTTCCT+TGG - chr2.1:46108819-46108838 MS.gene068898:intron 35.0%
AACGTTGGACTTCTGTCATT+TGG - chr2.1:46109650-46109669 MS.gene068898:CDS 40.0%
ACCAAAAGGGTTGGACAAAA+TGG - chr2.1:46110212-46110231 MS.gene068898:CDS 40.0%
ACCTGAGCCTTCAAATCAAA+AGG - chr2.1:46108447-46108466 MS.gene068898:CDS 40.0%
ACGGTAAATTGACCAGGTAA+TGG + chr2.1:46110010-46110029 None:intergenic 40.0%
ATAGCAATTGAGAACAGAGC+TGG - chr2.1:46109779-46109798 MS.gene068898:CDS 40.0%
ATGCTAGTTGTATCTGCAGA+TGG - chr2.1:46108544-46108563 MS.gene068898:CDS 40.0%
CCTGAGCCTTCAAATCAAAA+GGG - chr2.1:46108448-46108467 MS.gene068898:CDS 40.0%
GATGATGAGTTTGTGAGATG+AGG + chr2.1:46107885-46107904 None:intergenic 40.0%
GCTGACCTACCGATATTATA+TGG - chr2.1:46109395-46109414 MS.gene068898:intron 40.0%
GTATCAAGAATGCCATTACC+TGG - chr2.1:46109995-46110014 MS.gene068898:CDS 40.0%
TATCGCGAATGCGACATTTA+CGG - chr2.1:46109917-46109936 MS.gene068898:CDS 40.0%
TGAAATTCCCGTGTCTTCAT+CGG + chr2.1:46110059-46110078 None:intergenic 40.0%
TGGGCCAATAAATATCGGAT+AGG - chr2.1:46109415-46109434 MS.gene068898:intron 40.0%
TTGGCCCATATAATATCGGT+AGG + chr2.1:46109403-46109422 None:intergenic 40.0%
! AACATTGTGATGCTTGGTGA+TGG - chr2.1:46108694-46108713 MS.gene068898:intron 40.0%
! ACCATTTTGTCCAACCCTTT+TGG + chr2.1:46110216-46110235 None:intergenic 40.0%
! ACGTTGGACTTCTGTCATTT+GGG - chr2.1:46109651-46109670 MS.gene068898:CDS 40.0%
! GGGCAACTATTTTCATGCTA+TGG - chr2.1:46109614-46109633 MS.gene068898:CDS 40.0%
! GGTATTGAATGATGAGGTTG+TGG + chr2.1:46107960-46107979 None:intergenic 40.0%
! TCTAATCTTTTCCACGACGT+TGG - chr2.1:46108139-46108158 MS.gene068898:CDS 40.0%
! TTTTCAGCTGTATCTGGAGA+TGG - chr2.1:46109740-46109759 MS.gene068898:CDS 40.0%
!! ACAGAAGTGTTGTTGATGGA+TGG - chr2.1:46108743-46108762 MS.gene068898:intron 40.0%
!! GGTAACAGAAGTGTTGTTGA+TGG - chr2.1:46108739-46108758 MS.gene068898:intron 40.0%
!! GGTTTGGGATTTTTACAAGG+TGG - chr2.1:46109220-46109239 MS.gene068898:intron 40.0%
!! GTTCTAGAAAAAACCCTCCA+TGG + chr2.1:46110157-46110176 None:intergenic 40.0%
AAATTCCCGTGTCTTCATCG+GGG + chr2.1:46110057-46110076 None:intergenic 45.0%
AGGTCAAAAGTTACCTTGGG+AGG - chr2.1:46110131-46110150 MS.gene068898:CDS 45.0%
AGTGATGCTACTGTGATCAC+TGG - chr2.1:46108718-46108737 MS.gene068898:intron 45.0%
ATCGCGAATGCGACATTTAC+GGG - chr2.1:46109918-46109937 MS.gene068898:CDS 45.0%
GAAATTCCCGTGTCTTCATC+GGG + chr2.1:46110058-46110077 None:intergenic 45.0%
GAGGTAATGTGAGTGAGAAG+AGG + chr2.1:46107922-46107941 None:intergenic 45.0%
GCAACTGCTTGATGTTTCTC+TGG + chr2.1:46109806-46109825 None:intergenic 45.0%
GTTGTATCTGCAGATGGAAG+TGG - chr2.1:46108550-46108569 MS.gene068898:intron 45.0%
TATTCGATGTTCCAACGTCG+TGG + chr2.1:46108153-46108172 None:intergenic 45.0%
TGATGAGGTTGTGGATGTGT+TGG + chr2.1:46107951-46107970 None:intergenic 45.0%
! CGTTGGACTTCTGTCATTTG+GGG - chr2.1:46109652-46109671 MS.gene068898:CDS 45.0%
! GATGGTCTTGATTCTGCTTC+TGG - chr2.1:46108340-46108359 MS.gene068898:CDS 45.0%
! GTTGGACTTCTGTCATTTGG+GGG - chr2.1:46109653-46109672 MS.gene068898:CDS 45.0%
! TTTGTTCGAGGAACGGATTC+CGG + chr2.1:46108257-46108276 None:intergenic 45.0%
!! GTGGATGTGTTGGTTTGAAG+AGG + chr2.1:46107941-46107960 None:intergenic 45.0%
!!! CCCTTTTGATTTGAAGGCTC+AGG + chr2.1:46108451-46108470 None:intergenic 45.0%
AAAGTTACCTTGGGAGGCCA+TGG - chr2.1:46110137-46110156 MS.gene068898:CDS 50.0%
CCGTGATTGCGCGGTTATAA+CGG + chr2.1:46110029-46110048 None:intergenic 50.0%
CCGTTATAACCGCGCAATCA+CGG - chr2.1:46110026-46110045 MS.gene068898:CDS 50.0%
CGTTATAACCGCGCAATCAC+GGG - chr2.1:46110027-46110046 MS.gene068898:CDS 50.0%
GATAACCCCGATGAAGACAC+GGG - chr2.1:46110049-46110068 MS.gene068898:CDS 50.0%
GGATAACCCCGATGAAGACA+CGG - chr2.1:46110048-46110067 MS.gene068898:CDS 50.0%
! TGTTGGTTAGGGCTGCACTA+AGG + chr2.1:46108306-46108325 None:intergenic 50.0%
TTACCTTGGGAGGCCATGGA+GGG - chr2.1:46110141-46110160 MS.gene068898:CDS 55.0%
AAACCCTCCATGGCCTCCCA+AGG + chr2.1:46110147-46110166 None:intergenic 60.0%
GGGGTTATCCCGTGATTGCG+CGG + chr2.1:46110038-46110057 None:intergenic 60.0%
GTTACCTTGGGAGGCCATGG+AGG - chr2.1:46110140-46110159 MS.gene068898:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 46107875 46110435 46107875 ID=MS.gene068898
chr2.1 mRNA 46107875 46110435 46107875 ID=MS.gene068898.t1;Parent=MS.gene068898
chr2.1 exon 46109520 46110435 46109520 ID=MS.gene068898.t1.exon1;Parent=MS.gene068898.t1
chr2.1 CDS 46109520 46110435 46109520 ID=cds.MS.gene068898.t1;Parent=MS.gene068898.t1
chr2.1 exon 46107875 46108563 46107875 ID=MS.gene068898.t1.exon2;Parent=MS.gene068898.t1
chr2.1 CDS 46107875 46108563 46107875 ID=cds.MS.gene068898.t1;Parent=MS.gene068898.t1
Gene Sequence

>MS.gene068898

ATGGCTTCCTCATCTCACAAACTCATCATCCTTCTCTTTACAATCCTCTTCTCACTCACATTACCTCTTCAAACCAACACATCCACAACCTCATCATTCAATACCAACAAACTCAGTTCCTTAAAATCTTTATGCAAAACAACACCATACCCTAAACTTTGTTTCAACTCATTAAAACTTTCCATATCCATAAACATAAACCCAAACATCATAAACTTCCTTCTTCATTCACTTCAACTAGCAATATCCGAAACCACAAAGCTATCTAATCTTTTCCACGACGTTGGAACATCGAATATCGTAGAGAAACAACGAGGATCAATTCAAGACTGTAAGGAACTTCATCAATCAACGTTAACTTCATTGAAAAGATCATTATCCGGAATCCGTTCCTCGAACAAAAGAAACATAGCTGATGCTAGAATCTACCTTAGTGCAGCCCTAACCAACAAAAACACATGTTTAGATGGTCTTGATTCTGCTTCTGGTACATATAAACCAGTTCTTGTGAATTCTATTATCAACACTTACAAACATGTAAGTAACTCTCTTTCTATGCTTTCTAATCATGCACCTGAGCCTTCAAATCAAAAGGGTTACAAGAAAAAATCAACTTCTCCAAAATGGTTATCAAAAAGCTTAGATTTGGATGAATATGATCCAAATGAAATGCTAGTTGTATCTGCAGATGGAAGTGGAAACTTTAGCACTATTAATGATGCTATAAACTTTGCTCCAAATAATAGTTTGGTTAGGATAGTTATTTATGTTAAAGAAGGGGTTTATGATGAAAATGTTGAAATACCAAGTTATAAAACTAACATTGTGATGCTTGGTGATGGAAGTGATGCTACTGTGATCACTGGTAACAGAAGTGTTGTTGATGGATGGACCACTTTCAGATCTGCAACTTTAGGTGAAGTTTTTCTTTACCCTTTTTTCTTGGTTTTGTCTTTTACTTCCTTGGATTTTTCTGTGCTTTGTCTTTTAAAAAAGAATAAGTGTTGCTGATGCAATAGATTCTACAATATTAAATTAAATTTGTCAATGAACTAATTATAGTGTGTTTGATTTCACAAGAGTTTTAAAATTGATTTTGTTTTGGATCATATGTGATTTTAAAAAAATATAGATGTGTATGATTATTGGACAGAAATCATTTTGTTCCCAATCTTTATTTGATGGTAAAATATAAAATTAATTTGTGTCTAGTTAAAAAAAATTGTCTTTGGAATAAAATAATCAACATATAAATTTCTTTATTTCAGGCTAATTTTATTCAAATTAATTTTATATAATCAATTTCAATCAAAATTGTTTTTTCTAAAACTAATTCTTAGAATTTGGTTTGGGATTTTTACAAGGTGGATATCTTTTCATGGTGAGACTTAGATTTTTCCAATATACCCTCTTTTCATATTATAATTTTATTCTGGGATTAACTCAACTTTACAAAACCAGTTATTATATTTAGTCTTATATTTCATCCAATTTAGGATTCTCGTACATCTACGATATGAGCTGACCTACCGATATTATATGGGCCAATAAATATCGGATAGGCACAAATACAATCTTAGAATTTGGATTGAGTTTTGCTCAACGCTAAAGAATCGACTTGTAACTCTTGAAATATCATTCTTCATCAACATTTTTTAGTCATTATCTCTTTTCAATTTTTCGACTTGGATTTTTATCAATAATAATGTTCATAATTAGTTAAAAAAACTAAAGATTATGGGCAACTATTTTCATGCTATGGTGACATTACAATAAACGTTGGACTTCTGTCATTTGGGGGAATACTCAATTAGTGTACCATGTTTCCAAATTGACAGTCACGTGATAATTAATACTCATTTCATTTTTCAGCTGTATCTGGAGATGGATTTCTTGCAAGAGACATAGCAATTGAGAACAGAGCTGGACCAGAGAAACATCAAGCAGTTGCATTAAGAGTAAATGCAGATTTAACAGCATTTTACAAATGTGCAATTTATGGTTACCAAGACACACTTTATGTTCACTCATTTAGACAATTCTATCGCGAATGCGACATTTACGGGACAATAGATTTCATATTTGGTAACGCCGCAGTAGTATTACAAGAATGCGACATCGTATCAAGAATGCCATTACCTGGTCAATTTACCGTTATAACCGCGCAATCACGGGATAACCCCGATGAAGACACGGGAATTTCAATCCAAAACTGTTCAATTATAGCTACGGACGAGCTTTATTCGAACTCTAGTAAGGTCAAAAGTTACCTTGGGAGGCCATGGAGGGTTTTTTCTAGAACAGTTTTTATTGAGTCTTATATTGATGATTTTATTGACCAAAAGGGTTGGACAAAATGGTCAAATGATCAAGGTTTGGATACATTGTTTTATGGTGAATATGAAAATTATGGACCTGGTTCAAAGATTGATAATCGTGTTGAATGGATTGGTTATCATTTGATGGATTATAATGATGCTTATAATTTCAGTGTTTCTGAGTTTATTATTGGTGATCAATGGCTTGAGTCTACTTCAGTTCCTTATGATGATGGAATTTGA

Protein sequence

>MS.gene068898.t1

MASSSHKLIILLFTILFSLTLPLQTNTSTTSSFNTNKLSSLKSLCKTTPYPKLCFNSLKLSISININPNIINFLLHSLQLAISETTKLSNLFHDVGTSNIVEKQRGSIQDCKELHQSTLTSLKRSLSGIRSSNKRNIADARIYLSAALTNKNTCLDGLDSASGTYKPVLVNSIINTYKHVSNSLSMLSNHAPEPSNQKGYKKKSTSPKWLSKSLDLDEYDPNEMLVVSADGSGNFSTINDAINFAPNNSLVRIVIYVKEGVYDENVEIPSYKTNIVMLGDGSDATVITGNRSVVDGWTTFRSATLAVSGDGFLARDIAIENRAGPEKHQAVALRVNADLTAFYKCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQECDIVSRMPLPGQFTVITAQSRDNPDEDTGISIQNCSIIATDELYSNSSKVKSYLGRPWRVFSRTVFIESYIDDFIDQKGWTKWSNDQGLDTLFYGEYENYGPGSKIDNRVEWIGYHLMDYNDAYNFSVSEFIIGDQWLESTSVPYDDGI