Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059933.t1 | KEH31773.1 | 99.1 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 2.40E-57 | 231.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059933.t1 | A0A072URT5 | 99.1 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 1.7e-57 | 231.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050670 | MS.gene059933 | 0.822822 | 1.93E-53 | -1.69E-46 |
MS.gene051525 | MS.gene059933 | 0.82947 | 5.06E-55 | -1.69E-46 |
MS.gene051588 | MS.gene059933 | 0.812581 | 3.94E-51 | -1.69E-46 |
MS.gene052414 | MS.gene059933 | 0.816889 | 4.38E-52 | -1.69E-46 |
MS.gene052982 | MS.gene059933 | 0.800077 | 1.71E-48 | -1.69E-46 |
MS.gene053169 | MS.gene059933 | 0.807371 | 5.22E-50 | -1.69E-46 |
MS.gene054183 | MS.gene059933 | 0.807677 | 4.50E-50 | -1.69E-46 |
MS.gene054556 | MS.gene059933 | 0.801228 | 9.94E-49 | -1.69E-46 |
MS.gene055116 | MS.gene059933 | 0.802036 | 6.79E-49 | -1.69E-46 |
MS.gene055369 | MS.gene059933 | 0.837343 | 5.50E-57 | -1.69E-46 |
MS.gene056422 | MS.gene059933 | 0.812862 | 3.42E-51 | -1.69E-46 |
MS.gene058700 | MS.gene059933 | 0.818146 | 2.28E-52 | -1.69E-46 |
MS.gene058995 | MS.gene059933 | 0.808871 | 2.50E-50 | -1.69E-46 |
MS.gene059420 | MS.gene059933 | 0.819449 | 1.15E-52 | -1.69E-46 |
MS.gene059807 | MS.gene059933 | 0.826524 | 2.59E-54 | -1.69E-46 |
MS.gene059933 | MS.gene060403 | 0.82488 | 6.35E-54 | -1.69E-46 |
MS.gene059933 | MS.gene061154 | 0.823637 | 1.24E-53 | -1.69E-46 |
MS.gene059933 | MS.gene061718 | 0.833368 | 5.55E-56 | -1.69E-46 |
MS.gene059933 | MS.gene065130 | 0.803246 | 3.82E-49 | -1.69E-46 |
MS.gene059933 | MS.gene066009 | 0.842758 | 2.13E-58 | -1.69E-46 |
MS.gene059933 | MS.gene066538 | 0.835014 | 2.15E-56 | -1.69E-46 |
MS.gene059933 | MS.gene068064 | 0.824153 | 9.42E-54 | -1.69E-46 |
MS.gene059933 | MS.gene068621 | 0.822151 | 2.76E-53 | -1.69E-46 |
MS.gene059933 | MS.gene069717 | 0.826452 | 2.69E-54 | -1.69E-46 |
MS.gene059933 | MS.gene069870 | 0.807046 | 6.12E-50 | -1.69E-46 |
MS.gene059933 | MS.gene070279 | 0.821206 | 4.57E-53 | -1.69E-46 |
MS.gene059933 | MS.gene070835 | 0.830414 | 2.98E-55 | -1.69E-46 |
MS.gene059933 | MS.gene070950 | 0.803067 | 4.16E-49 | -1.69E-46 |
MS.gene059933 | MS.gene071294 | 0.816242 | 6.12E-52 | -1.69E-46 |
MS.gene059933 | MS.gene071623 | 0.80492 | 1.71E-49 | -1.69E-46 |
MS.gene059933 | MS.gene071722 | 0.80845 | 3.08E-50 | -1.69E-46 |
MS.gene059933 | MS.gene07366 | 0.810897 | 9.17E-51 | -1.69E-46 |
MS.gene059933 | MS.gene07862 | 0.819087 | 1.40E-52 | -1.69E-46 |
MS.gene059933 | MS.gene08906 | 0.806363 | 8.53E-50 | -1.69E-46 |
MS.gene059933 | MS.gene08908 | 0.813504 | 2.47E-51 | -1.69E-46 |
MS.gene059933 | MS.gene09727 | 0.803059 | 4.18E-49 | -1.69E-46 |
MS.gene059933 | MS.gene09923 | 0.801793 | 7.61E-49 | -1.69E-46 |
MS.gene059933 | MS.gene20025 | 0.822512 | 2.28E-53 | -1.69E-46 |
MS.gene059933 | MS.gene20556 | 0.816079 | 6.65E-52 | -1.69E-46 |
MS.gene059933 | MS.gene21534 | 0.80198 | 6.97E-49 | -1.69E-46 |
MS.gene059933 | MS.gene22386 | 0.801408 | 9.13E-49 | -1.69E-46 |
MS.gene059933 | MS.gene22721 | 0.817086 | 3.96E-52 | -1.69E-46 |
MS.gene059933 | MS.gene22764 | 0.837943 | 3.86E-57 | -1.69E-46 |
MS.gene059933 | MS.gene24611 | 0.803102 | 4.09E-49 | -1.69E-46 |
MS.gene059933 | MS.gene27100 | 0.814313 | 1.64E-51 | -1.69E-46 |
MS.gene059933 | MS.gene27363 | 0.81329 | 2.76E-51 | -1.69E-46 |
MS.gene059933 | MS.gene28441 | 0.81255 | 4.01E-51 | -1.69E-46 |
MS.gene059933 | MS.gene30306 | 0.810929 | 9.03E-51 | -1.69E-46 |
MS.gene059933 | MS.gene30475 | 0.807944 | 3.95E-50 | -1.69E-46 |
MS.gene059933 | MS.gene30733 | 0.822111 | 2.82E-53 | -1.69E-46 |
MS.gene059933 | MS.gene30932 | 0.825052 | 5.78E-54 | -1.69E-46 |
MS.gene059933 | MS.gene30953 | 0.81523 | 1.03E-51 | -1.69E-46 |
MS.gene059933 | MS.gene32713 | 0.808455 | 3.07E-50 | -1.69E-46 |
MS.gene059933 | MS.gene32865 | 0.823541 | 1.31E-53 | -1.69E-46 |
MS.gene059933 | MS.gene33072 | 0.800957 | 1.13E-48 | -1.69E-46 |
MS.gene059933 | MS.gene34376 | 0.819144 | 1.35E-52 | -1.69E-46 |
MS.gene059933 | MS.gene34496 | 0.832968 | 6.98E-56 | -1.69E-46 |
MS.gene059933 | MS.gene34845 | 0.805044 | 1.61E-49 | -1.69E-46 |
MS.gene059933 | MS.gene35265 | 0.818284 | 2.12E-52 | -1.69E-46 |
MS.gene059933 | MS.gene35615 | 0.810876 | 9.27E-51 | -1.69E-46 |
MS.gene059933 | MS.gene35984 | 0.836546 | 8.79E-57 | -1.69E-46 |
MS.gene059933 | MS.gene36105 | 0.805393 | 1.36E-49 | -1.69E-46 |
MS.gene059933 | MS.gene36309 | 0.816699 | 4.83E-52 | -1.69E-46 |
MS.gene059933 | MS.gene36818 | 0.848237 | 6.96E-60 | -1.69E-46 |
MS.gene059933 | MS.gene36952 | 0.829436 | 5.15E-55 | -1.69E-46 |
MS.gene059933 | MS.gene39277 | 0.838295 | 3.13E-57 | -1.69E-46 |
MS.gene059933 | MS.gene40678 | 0.805732 | 1.16E-49 | -1.69E-46 |
MS.gene059933 | MS.gene41435 | 0.836428 | 9.41E-57 | -1.69E-46 |
MS.gene059933 | MS.gene41873 | 0.808294 | 3.32E-50 | -1.69E-46 |
MS.gene059933 | MS.gene42746 | 0.827027 | 1.96E-54 | -1.69E-46 |
MS.gene059933 | MS.gene43562 | 0.823998 | 1.02E-53 | -1.69E-46 |
MS.gene059933 | MS.gene44558 | 0.837462 | 5.13E-57 | -1.69E-46 |
MS.gene059933 | MS.gene44640 | 0.81248 | 4.15E-51 | -1.69E-46 |
MS.gene059933 | MS.gene45487 | 0.804809 | 1.81E-49 | -1.69E-46 |
MS.gene059933 | MS.gene46956 | 0.854857 | 9.31E-62 | -1.69E-46 |
MS.gene059933 | MS.gene46957 | 0.81366 | 2.29E-51 | -1.69E-46 |
MS.gene059933 | MS.gene47396 | 0.826461 | 2.68E-54 | -1.69E-46 |
MS.gene059933 | MS.gene47869 | 0.840137 | 1.04E-57 | -1.69E-46 |
MS.gene059933 | MS.gene48585 | 0.819764 | 9.79E-53 | -1.69E-46 |
MS.gene059933 | MS.gene49092 | 0.818907 | 1.53E-52 | -1.69E-46 |
MS.gene059933 | MS.gene49121 | 0.827801 | 1.28E-54 | -1.69E-46 |
MS.gene059933 | MS.gene50985 | 0.812088 | 5.06E-51 | -1.69E-46 |
MS.gene059933 | MS.gene51067 | 0.800742 | 1.25E-48 | -1.69E-46 |
MS.gene059933 | MS.gene51922 | 0.827107 | 1.88E-54 | -1.69E-46 |
MS.gene059933 | MS.gene52101 | 0.834603 | 2.72E-56 | -1.69E-46 |
MS.gene059933 | MS.gene52283 | 0.816582 | 5.14E-52 | -1.69E-46 |
MS.gene059933 | MS.gene52997 | 0.839472 | 1.55E-57 | -1.69E-46 |
MS.gene059933 | MS.gene55340 | 0.805843 | 1.10E-49 | -1.69E-46 |
MS.gene059933 | MS.gene56177 | 0.805027 | 1.63E-49 | -1.69E-46 |
MS.gene059933 | MS.gene56713 | 0.840837 | 6.84E-58 | -1.69E-46 |
MS.gene059933 | MS.gene56808 | 0.812802 | 3.53E-51 | -1.69E-46 |
MS.gene059933 | MS.gene57561 | 0.805889 | 1.07E-49 | -1.69E-46 |
MS.gene059933 | MS.gene58252 | 0.81347 | 2.52E-51 | -1.69E-46 |
MS.gene059933 | MS.gene58344 | 0.801607 | 8.31E-49 | -1.69E-46 |
MS.gene059933 | MS.gene58434 | 0.804932 | 1.70E-49 | -1.69E-46 |
MS.gene059933 | MS.gene58480 | 0.826114 | 3.24E-54 | -1.69E-46 |
MS.gene059933 | MS.gene58817 | 0.806848 | 6.74E-50 | -1.69E-46 |
MS.gene059933 | MS.gene59083 | 0.851301 | 9.70E-61 | -1.69E-46 |
MS.gene059933 | MS.gene62458 | 0.852009 | 6.11E-61 | -1.69E-46 |
MS.gene059933 | MS.gene62822 | 0.832942 | 7.09E-56 | -1.69E-46 |
MS.gene059933 | MS.gene62935 | 0.803544 | 3.31E-49 | -1.69E-46 |
MS.gene059933 | MS.gene64266 | 0.849198 | 3.77E-60 | -1.69E-46 |
MS.gene059933 | MS.gene65978 | 0.811399 | 7.14E-51 | -1.69E-46 |
MS.gene059933 | MS.gene67422 | 0.806049 | 9.94E-50 | -1.69E-46 |
MS.gene059933 | MS.gene68677 | 0.801368 | 9.31E-49 | -1.69E-46 |
MS.gene059933 | MS.gene71287 | 0.811836 | 5.74E-51 | -1.69E-46 |
MS.gene059933 | MS.gene71664 | 0.811291 | 7.53E-51 | -1.69E-46 |
MS.gene059933 | MS.gene71836 | 0.805011 | 1.64E-49 | -1.69E-46 |
MS.gene059933 | MS.gene72540 | 0.833281 | 5.84E-56 | -1.69E-46 |
MS.gene059933 | MS.gene73334 | 0.801369 | 9.30E-49 | -1.69E-46 |
MS.gene059933 | MS.gene74803 | 0.821126 | 4.76E-53 | -1.69E-46 |
MS.gene059933 | MS.gene74809 | 0.800973 | 1.12E-48 | -1.69E-46 |
MS.gene059933 | MS.gene76535 | 0.830656 | 2.60E-55 | -1.69E-46 |
MS.gene059933 | MS.gene77460 | 0.805504 | 1.29E-49 | -1.69E-46 |
MS.gene059933 | MS.gene77474 | 0.817463 | 3.26E-52 | -1.69E-46 |
MS.gene059933 | MS.gene77754 | 0.812072 | 5.09E-51 | -1.69E-46 |
MS.gene059933 | MS.gene78643 | 0.828551 | 8.44E-55 | -1.69E-46 |
MS.gene059933 | MS.gene79947 | 0.804237 | 2.38E-49 | -1.69E-46 |
MS.gene059933 | MS.gene81791 | 0.801439 | 9.00E-49 | -1.69E-46 |
MS.gene059933 | MS.gene81877 | 0.802843 | 4.63E-49 | -1.69E-46 |
MS.gene059933 | MS.gene83599 | 0.815853 | 7.47E-52 | -1.69E-46 |
MS.gene059933 | MS.gene83758 | 0.816709 | 4.81E-52 | -1.69E-46 |
MS.gene059933 | MS.gene85151 | 0.815626 | 8.39E-52 | -1.69E-46 |
MS.gene059933 | MS.gene90950 | 0.874141 | 8.52E-68 | -1.69E-46 |
MS.gene059933 | MS.gene91302 | 0.800793 | 1.22E-48 | -1.69E-46 |
MS.gene059933 | MS.gene91508 | 0.815499 | 8.96E-52 | -1.69E-46 |
MS.gene059933 | MS.gene92549 | 0.809092 | 2.24E-50 | -1.69E-46 |
MS.gene059933 | MS.gene94682 | 0.844744 | 6.25E-59 | -1.69E-46 |
MS.gene059933 | MS.gene95806 | 0.830688 | 2.55E-55 | -1.69E-46 |
MS.gene059933 | MS.gene96945 | 0.80336 | 3.62E-49 | -1.69E-46 |
MS.gene059933 | MS.gene98216 | 0.815977 | 7.01E-52 | -1.69E-46 |
MS.gene059933 | MS.gene98798 | 0.804976 | 1.67E-49 | -1.69E-46 |
MS.gene059933 | MS.gene99774 | 0.805004 | 1.65E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059933.t1 | MTR_4g104870 | 99.115 | 113 | 1 | 0 | 1 | 113 | 1 | 113 | 2.06e-82 | 238 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059933.t1 | AT4G24700 | 41.860 | 86 | 42 | 3 | 16 | 98 | 24 | 104 | 1.60e-13 | 63.5 |
Find 25 sgRNAs with CRISPR-Local
Find 56 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAAATCAGTTCAACTAAA+AGG | 0.265894 | 8.1:-19715306 | MS.gene059933:intron |
CTTTCAACACTTCTAAATCT+TGG | 0.352567 | 8.1:+19715592 | None:intergenic |
GTTTCAAGAAGGATTGAAAC+AGG | 0.360068 | 8.1:-19715366 | MS.gene059933:CDS |
GTTTCAAGCTTAAACCTTGA+AGG | 0.367417 | 8.1:+19715483 | None:intergenic |
ACACTTCTAAATCTTGGTTA+TGG | 0.368826 | 8.1:+19715598 | None:intergenic |
TAAACAGAGCCTAACCAAAA+AGG | 0.376150 | 8.1:-19714641 | MS.gene059933:intron |
GAAACTGTTACAAGCTCATA+AGG | 0.391839 | 8.1:+19715384 | None:intergenic |
TGACTTTCAACACTCACTTT+GGG | 0.415015 | 8.1:-19715409 | MS.gene059933:CDS |
GAAATTTCCTTCGCACTTTG+TGG | 0.415079 | 8.1:+19714580 | None:intergenic |
TCCTTCGCACTTTGTGGTAG+TGG | 0.419797 | 8.1:+19714586 | None:intergenic |
ATTTCAGAGGTAAGCCTTCA+AGG | 0.422597 | 8.1:-19715497 | MS.gene059933:CDS |
GTGACTTTCAACACTCACTT+TGG | 0.455830 | 8.1:-19715410 | MS.gene059933:CDS |
AGTGGTCGAGTGATCAAGAT+AGG | 0.479619 | 8.1:+19714604 | None:intergenic |
TTCCCTAGTTGATGATGACT+TGG | 0.515303 | 8.1:+19715455 | None:intergenic |
AGCTTGTAACAGTTTCAAGA+AGG | 0.526241 | 8.1:-19715377 | MS.gene059933:CDS |
TAACCAAGTCATCATCAACT+AGG | 0.529261 | 8.1:-19715458 | MS.gene059933:CDS |
AAACTGTTACAAGCTCATAA+GGG | 0.547351 | 8.1:+19715385 | None:intergenic |
ACTCAAAGGCTTTACACTGC+CGG | 0.552991 | 8.1:+19715542 | None:intergenic |
AACCAAGTCATCATCAACTA+GGG | 0.574505 | 8.1:-19715457 | MS.gene059933:CDS |
TGAAAGCTGTTGCACAAGCT+TGG | 0.604295 | 8.1:-19715575 | MS.gene059933:CDS |
CGCGCGTCGAATTCACTCAA+AGG | 0.612095 | 8.1:+19715528 | None:intergenic |
ACCACTACCACAAAGTGCGA+AGG | 0.629370 | 8.1:-19714587 | MS.gene059933:CDS |
TTTCAAGAAGGATTGAAACA+GGG | 0.651798 | 8.1:-19715365 | MS.gene059933:CDS |
GCGCGTCGAAGAAATTTCAG+AGG | 0.671191 | 8.1:-19715510 | MS.gene059933:CDS |
CAAGCTTGGTACAATCACTC+CGG | 0.679934 | 8.1:-19715561 | MS.gene059933:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTATTTTTTTTTAAAA+TGG | + | chr8.1:19715399-19715418 | None:intergenic | 0.0% |
!! | ATATATAAGTTATGAAAATG+AGG | + | chr8.1:19715319-19715338 | None:intergenic | 15.0% |
!!! | TATACTAGTTTGTTATATTA+GGG | - | chr8.1:19715095-19715114 | MS.gene059933:intron | 15.0% |
!!! | TTATACTAGTTTGTTATATT+AGG | - | chr8.1:19715094-19715113 | MS.gene059933:intron | 15.0% |
!!! | TTTTTAAAATGGAAAAGAAA+TGG | + | chr8.1:19715388-19715407 | None:intergenic | 15.0% |
!! | TATTAGGGAAATAGATTATT+CGG | - | chr8.1:19715110-19715129 | MS.gene059933:intron | 20.0% |
!!! | ATTTTTCAGTGGATAATTTA+GGG | + | chr8.1:19714987-19715006 | None:intergenic | 20.0% |
!!! | TTAATATAAAGTACCCTTAA+GGG | - | chr8.1:19715345-19715364 | MS.gene059933:CDS | 20.0% |
! | AGACACAAAAATCATCAAAT+GGG | + | chr8.1:19714876-19714895 | None:intergenic | 25.0% |
! | ATCGTGCGATTAAAAATAAA+CGG | - | chr8.1:19715163-19715182 | MS.gene059933:intron | 25.0% |
! | TATTGTCTAATTGTTTCCTA+TGG | - | chr8.1:19715490-19715509 | MS.gene059933:CDS | 25.0% |
!! | AGTGTTACAATATTTTCCAT+AGG | + | chr8.1:19715509-19715528 | None:intergenic | 25.0% |
!! | CTTAATATAAAGTACCCTTA+AGG | - | chr8.1:19715344-19715363 | MS.gene059933:CDS | 25.0% |
!!! | ACGAAATAACTTTCACTTTT+TGG | - | chr8.1:19715250-19715269 | MS.gene059933:intron | 25.0% |
!!! | CATTTTTCAGTGGATAATTT+AGG | + | chr8.1:19714988-19715007 | None:intergenic | 25.0% |
!!! | CTTAAGGGTACTTTATATTA+AGG | + | chr8.1:19715346-19715365 | None:intergenic | 25.0% |
AAACTGTTACAAGCTCATAA+GGG | + | chr8.1:19714819-19714838 | None:intergenic | 30.0% | |
AAATCAAAACATTGCCCTTA+AGG | + | chr8.1:19715362-19715381 | None:intergenic | 30.0% | |
AATCAAAACATTGCCCTTAA+GGG | + | chr8.1:19715361-19715380 | None:intergenic | 30.0% | |
ACACTTCTAAATCTTGGTTA+TGG | + | chr8.1:19714606-19714625 | None:intergenic | 30.0% | |
AGTTCAACTAAAAGGTAAGA+GGG | - | chr8.1:19714903-19714922 | MS.gene059933:intron | 30.0% | |
CTTTCAACACTTCTAAATCT+TGG | + | chr8.1:19714612-19714631 | None:intergenic | 30.0% | |
GAGACACAAAAATCATCAAA+TGG | + | chr8.1:19714877-19714896 | None:intergenic | 30.0% | |
TCCAAATCAGTTCAACTAAA+AGG | - | chr8.1:19714895-19714914 | MS.gene059933:intron | 30.0% | |
TGTTCAATAACATGTCTTCT+AGG | - | chr8.1:19714950-19714969 | MS.gene059933:intron | 30.0% | |
TTTCAAGAAGGATTGAAACA+GGG | - | chr8.1:19714836-19714855 | MS.gene059933:intron | 30.0% | |
! | AAGTTATTTCGTCTATCCAA+TGG | + | chr8.1:19715242-19715261 | None:intergenic | 30.0% |
!! | ACCTTTTAGTTGAACTGATT+TGG | + | chr8.1:19714899-19714918 | None:intergenic | 30.0% |
!! | CATGTACTATCATTTTTCAG+TGG | + | chr8.1:19714998-19715017 | None:intergenic | 30.0% |
AACCAAGTCATCATCAACTA+GGG | - | chr8.1:19714744-19714763 | MS.gene059933:intron | 35.0% | |
ACTGCATAAATCAGAACCAT+TGG | - | chr8.1:19715223-19715242 | MS.gene059933:intron | 35.0% | |
AGCTTGTAACAGTTTCAAGA+AGG | - | chr8.1:19714824-19714843 | MS.gene059933:intron | 35.0% | |
CAGTTCAACTAAAAGGTAAG+AGG | - | chr8.1:19714902-19714921 | MS.gene059933:intron | 35.0% | |
GAAACTGTTACAAGCTCATA+AGG | + | chr8.1:19714820-19714839 | None:intergenic | 35.0% | |
GTTTCAAGAAGGATTGAAAC+AGG | - | chr8.1:19714835-19714854 | MS.gene059933:intron | 35.0% | |
GTTTCAAGCTTAAACCTTGA+AGG | + | chr8.1:19714721-19714740 | None:intergenic | 35.0% | |
TAAACAGAGCCTAACCAAAA+AGG | - | chr8.1:19715560-19715579 | MS.gene059933:CDS | 35.0% | |
TAACCAAGTCATCATCAACT+AGG | - | chr8.1:19714743-19714762 | MS.gene059933:intron | 35.0% | |
TGACTTTCAACACTCACTTT+GGG | - | chr8.1:19714792-19714811 | MS.gene059933:intron | 35.0% | |
!!! | TTTTCGATGCCTTTTTGGTT+AGG | + | chr8.1:19715572-19715591 | None:intergenic | 35.0% |
ATTTCAGAGGTAAGCCTTCA+AGG | - | chr8.1:19714704-19714723 | MS.gene059933:intron | 40.0% | |
GAAATTTCCTTCGCACTTTG+TGG | + | chr8.1:19715624-19715643 | None:intergenic | 40.0% | |
GGGAGAGTAAGAATAGTCTT+AGG | - | chr8.1:19714923-19714942 | MS.gene059933:intron | 40.0% | |
GTGACTTTCAACACTCACTT+TGG | - | chr8.1:19714791-19714810 | MS.gene059933:intron | 40.0% | |
TTTAGAAAGCAGTCAAGCGA+AGG | + | chr8.1:19715544-19715563 | None:intergenic | 40.0% | |
! | CCATGTTTTCGATGCCTTTT+TGG | + | chr8.1:19715577-19715596 | None:intergenic | 40.0% |
!! | CCAAAAAGGCATCGAAAACA+TGG | - | chr8.1:19715574-19715593 | MS.gene059933:CDS | 40.0% |
!! | TTCCCTAGTTGATGATGACT+TGG | + | chr8.1:19714749-19714768 | None:intergenic | 40.0% |
ACTCAAAGGCTTTACACTGC+CGG | + | chr8.1:19714662-19714681 | None:intergenic | 45.0% | |
AGTGGTCGAGTGATCAAGAT+AGG | + | chr8.1:19715600-19715619 | None:intergenic | 45.0% | |
CAAGCTTGGTACAATCACTC+CGG | - | chr8.1:19714640-19714659 | MS.gene059933:intron | 45.0% | |
TGAAAGCTGTTGCACAAGCT+TGG | - | chr8.1:19714626-19714645 | MS.gene059933:CDS | 45.0% | |
ACCACTACCACAAAGTGCGA+AGG | - | chr8.1:19715614-19715633 | MS.gene059933:CDS | 50.0% | |
GCGCGTCGAAGAAATTTCAG+AGG | - | chr8.1:19714691-19714710 | MS.gene059933:intron | 50.0% | |
TCCTTCGCACTTTGTGGTAG+TGG | + | chr8.1:19715618-19715637 | None:intergenic | 50.0% | |
CGCGCGTCGAATTCACTCAA+AGG | + | chr8.1:19714676-19714695 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 19714577 | 19715646 | 19714577 | ID=MS.gene059933 |
chr8.1 | mRNA | 19714577 | 19715646 | 19714577 | ID=MS.gene059933.t1;Parent=MS.gene059933 |
chr8.1 | exon | 19715307 | 19715646 | 19715307 | ID=MS.gene059933.t1.exon1;Parent=MS.gene059933.t1 |
chr8.1 | CDS | 19715307 | 19715646 | 19715307 | ID=cds.MS.gene059933.t1;Parent=MS.gene059933.t1 |
chr8.1 | exon | 19714577 | 19714656 | 19714577 | ID=MS.gene059933.t1.exon2;Parent=MS.gene059933.t1 |
chr8.1 | CDS | 19714577 | 19714656 | 19714577 | ID=cds.MS.gene059933.t1;Parent=MS.gene059933.t1 |
Gene Sequence |
Protein sequence |