Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072572.t1 | XP_013450438.1 | 99 | 411 | 4 | 0 | 1 | 411 | 1 | 411 | 7.40E-240 | 839.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072572.t1 | F4I562 | 78.0 | 414 | 87 | 1 | 1 | 410 | 1 | 414 | 3.8e-200 | 698.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072572.t1 | A0A072U533 | 99.0 | 411 | 4 | 0 | 1 | 411 | 1 | 411 | 5.4e-240 | 839.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054375 | MS.gene072572 | 0.995681 | 9.20E-219 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072572 | MS.gene059672 | PPI |
| MS.gene072572 | MS.gene008864 | PPI |
| MS.gene072572 | MS.gene010105 | PPI |
| MS.gene29199 | MS.gene072572 | PPI |
| MS.gene068109 | MS.gene072572 | PPI |
| MS.gene072572 | MS.gene067937 | PPI |
| MS.gene072572 | MS.gene44324 | PPI |
| MS.gene86178 | MS.gene072572 | PPI |
| MS.gene027687 | MS.gene072572 | PPI |
| MS.gene015312 | MS.gene072572 | PPI |
| MS.gene072572 | MS.gene09656 | PPI |
| MS.gene072572 | MS.gene21470 | PPI |
| MS.gene072572 | MS.gene056431 | PPI |
| MS.gene050001 | MS.gene072572 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072572.t1 | MTR_7g111870 | 99.027 | 411 | 4 | 0 | 1 | 411 | 1 | 411 | 0.0 | 843 |
| MS.gene072572.t1 | MTR_7g111870 | 99.394 | 330 | 2 | 0 | 1 | 330 | 1 | 330 | 0.0 | 679 |
| MS.gene072572.t1 | MTR_5g033500 | 25.843 | 445 | 267 | 11 | 4 | 410 | 7 | 426 | 4.43e-45 | 161 |
| MS.gene072572.t1 | MTR_8g069565 | 26.196 | 439 | 273 | 12 | 4 | 410 | 7 | 426 | 7.82e-45 | 160 |
| MS.gene072572.t1 | MTR_3g112190 | 27.252 | 444 | 286 | 9 | 1 | 410 | 1 | 441 | 5.02e-44 | 159 |
| MS.gene072572.t1 | MTR_5g066050 | 27.753 | 454 | 279 | 11 | 1 | 410 | 1 | 449 | 1.96e-43 | 157 |
| MS.gene072572.t1 | MTR_5g014330 | 29.041 | 365 | 221 | 11 | 76 | 410 | 81 | 437 | 3.51e-43 | 156 |
| MS.gene072572.t1 | MTR_5g066050 | 27.912 | 455 | 278 | 11 | 1 | 410 | 1 | 450 | 5.14e-43 | 156 |
| MS.gene072572.t1 | MTR_5g014330 | 29.141 | 326 | 194 | 10 | 76 | 372 | 81 | 398 | 2.06e-38 | 143 |
| MS.gene072572.t1 | MTR_5g033500 | 27.044 | 318 | 182 | 6 | 4 | 293 | 7 | 302 | 2.58e-38 | 142 |
| MS.gene072572.t1 | MTR_4g022790 | 52.756 | 127 | 12 | 2 | 113 | 239 | 3 | 81 | 1.81e-31 | 115 |
| MS.gene072572.t1 | MTR_7g014365 | 44.828 | 116 | 32 | 3 | 108 | 223 | 24 | 107 | 5.71e-17 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072572.t1 | AT1G56590 | 78.019 | 414 | 87 | 1 | 1 | 410 | 1 | 414 | 0.0 | 701 |
| MS.gene072572.t1 | AT1G60780 | 29.213 | 356 | 213 | 8 | 79 | 410 | 86 | 426 | 1.97e-46 | 165 |
| MS.gene072572.t1 | AT4G24550 | 27.974 | 454 | 278 | 12 | 1 | 410 | 2 | 450 | 7.64e-44 | 159 |
| MS.gene072572.t1 | AT1G10730 | 26.147 | 436 | 277 | 11 | 4 | 410 | 7 | 426 | 1.40e-43 | 157 |
| MS.gene072572.t1 | AT4G24550 | 28.756 | 386 | 236 | 9 | 1 | 349 | 2 | 385 | 8.06e-43 | 154 |
| MS.gene072572.t1 | AT4G24550 | 29.333 | 375 | 226 | 9 | 1 | 338 | 2 | 374 | 3.03e-42 | 153 |
| MS.gene072572.t1 | AT5G46630 | 28.493 | 365 | 223 | 11 | 76 | 410 | 81 | 437 | 1.27e-40 | 150 |
| MS.gene072572.t1 | AT5G46630 | 28.736 | 348 | 211 | 10 | 76 | 394 | 81 | 420 | 2.96e-39 | 146 |
Find 0 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGATTAAATTGAAAAT+TGG | + | 51773:5136-5155 | None:intergenic | 10.0% |
| !! | AATTGATTAAATTGAAAATT+GGG | + | 51773:5135-5154 | None:intergenic | 10.0% |
| !!! | TTTTATTTTCTTAAAATTCT+GGG | - | 51773:7738-7757 | MS.gene072572:intron | 10.0% |
| !!! | TTTTTATTTTCTTAAAATTC+TGG | - | 51773:7737-7756 | MS.gene072572:intron | 10.0% |
| !! | AAAAACTTGAAAAAGATAAT+GGG | + | 51773:5293-5312 | None:intergenic | 15.0% |
| !! | AACAATTATGTTATTAGATT+CGG | + | 51773:5827-5846 | None:intergenic | 15.0% |
| !! | AATTTAATGTGTATAAGTTA+AGG | + | 51773:6963-6982 | None:intergenic | 15.0% |
| !! | ACTAACAAAATATGATTATT+GGG | - | 51773:5584-5603 | MS.gene072572:CDS | 15.0% |
| !! | TAATAACATAATTGTTATAG+AGG | - | 51773:5831-5850 | MS.gene072572:CDS | 15.0% |
| !!! | GTCTTATTTTTAAAAATATC+TGG | - | 51773:6534-6553 | MS.gene072572:intron | 15.0% |
| !!! | TTGTTATTATGTTTGATAAA+TGG | - | 51773:7036-7055 | MS.gene072572:CDS | 15.0% |
| !! | AACCAAATAAATGATGAAAA+CGG | - | 51773:5857-5876 | MS.gene072572:CDS | 20.0% |
| !! | AATTTAAGCTAATGAATTAC+AGG | - | 51773:7608-7627 | MS.gene072572:intron | 20.0% |
| !! | AGAAAAGAAACTAAATATCA+CGG | + | 51773:7187-7206 | None:intergenic | 20.0% |
| !! | ATCTACATAAACTTCATTAT+TGG | + | 51773:6403-6422 | None:intergenic | 20.0% |
| !! | CACTAACAAAATATGATTAT+TGG | - | 51773:5583-5602 | MS.gene072572:CDS | 20.0% |
| !! | GAAAAACTTGAAAAAGATAA+TGG | + | 51773:5294-5313 | None:intergenic | 20.0% |
| !!! | AATTTATAGTAAAGCATCTT+AGG | - | 51773:6979-6998 | MS.gene072572:intron | 20.0% |
| !!! | CAATAATCATATTTTGTTAG+TGG | + | 51773:5585-5604 | None:intergenic | 20.0% |
| !!! | CTTAACTTTGACAATTTTAT+GGG | - | 51773:6487-6506 | MS.gene072572:intron | 20.0% |
| !!! | TCTTAACTTTGACAATTTTA+TGG | - | 51773:6486-6505 | MS.gene072572:intron | 20.0% |
| !!! | TTTGATTTGTTGTTTTGTTT+AGG | - | 51773:6150-6169 | MS.gene072572:intron | 20.0% |
| ! | AAAATTGGGAATTGAAGAAA+AGG | + | 51773:5121-5140 | None:intergenic | 25.0% |
| ! | AACAAAACAACAAATCAAAG+TGG | + | 51773:6149-6168 | None:intergenic | 25.0% |
| ! | AAGACTTTGCTAACAATATT+TGG | + | 51773:6285-6304 | None:intergenic | 25.0% |
| ! | AATAACAAAGTTGTCTTTGA+TGG | + | 51773:5515-5534 | None:intergenic | 25.0% |
| ! | AATTGAAGAAAAGGAAAGAA+GGG | + | 51773:5112-5131 | None:intergenic | 25.0% |
| ! | ACAAAACAACAAATCAAAGT+GGG | + | 51773:6148-6167 | None:intergenic | 25.0% |
| ! | ACAAAATATGATTATTGGGT+TGG | - | 51773:5588-5607 | MS.gene072572:CDS | 25.0% |
| ! | AGACAGTTAAATAATACAAC+TGG | - | 51773:5689-5708 | MS.gene072572:intron | 25.0% |
| ! | AGTTAACATTCTTTCTAACA+AGG | - | 51773:7967-7986 | MS.gene072572:intron | 25.0% |
| ! | ATAAAATTTCAGCCGATATA+AGG | + | 51773:7296-7315 | None:intergenic | 25.0% |
| ! | ATAACTTAGTCAAATCCTTA+CGG | - | 51773:6752-6771 | MS.gene072572:intron | 25.0% |
| ! | ATGAAAGAAGTTGAAAGAAA+TGG | + | 51773:7371-7390 | None:intergenic | 25.0% |
| ! | ATTATGTTTGATAAATGGCA+AGG | - | 51773:7041-7060 | MS.gene072572:CDS | 25.0% |
| ! | ATTTGACTAAGTTATACGTT+GGG | + | 51773:6747-6766 | None:intergenic | 25.0% |
| ! | CACAAATGAAAGAATTTGAT+TGG | + | 51773:7575-7594 | None:intergenic | 25.0% |
| ! | GATGTAATCAATGATTATCT+TGG | - | 51773:5472-5491 | MS.gene072572:CDS | 25.0% |
| ! | GGAACTAAAAATGAATTGAA+TGG | + | 51773:5438-5457 | None:intergenic | 25.0% |
| !! | AACCGTTTTCATCATTTATT+TGG | + | 51773:5862-5881 | None:intergenic | 25.0% |
| !! | AAGGTACTTACTTAATAAAC+AGG | - | 51773:7986-8005 | MS.gene072572:intron | 25.0% |
| !! | CATACTTGTTGCTAAAAATT+TGG | - | 51773:7388-7407 | MS.gene072572:intron | 25.0% |
| !! | CTAAAAATTTGGTTCATTCA+GGG | - | 51773:7399-7418 | MS.gene072572:intron | 25.0% |
| !! | TTGAAAACTATTTCTCTGAT+TGG | - | 51773:6848-6867 | MS.gene072572:intron | 25.0% |
| !!! | CAAAACTTCATTTCTAGTAA+AGG | - | 51773:7146-7165 | MS.gene072572:CDS | 25.0% |
| !!! | CAACTTTGTTATTGTTTATG+AGG | - | 51773:5522-5541 | MS.gene072572:CDS | 25.0% |
| !!! | TCATTTTTAGTTCCTTTGTA+GGG | - | 51773:5444-5463 | MS.gene072572:intron | 25.0% |
| !!! | TTCATTTTTAGTTCCTTTGT+AGG | - | 51773:5443-5462 | MS.gene072572:intron | 25.0% |
| AAATGGATGCAACAATAAAC+AGG | - | 51773:6433-6452 | MS.gene072572:intron | 30.0% | |
| AACGGTTTCAAATCCTAATT+AGG | + | 51773:7659-7678 | None:intergenic | 30.0% | |
| AAGAGTCAAAAGTAGAAGAA+AGG | + | 51773:6067-6086 | None:intergenic | 30.0% | |
| ACTTCATTATTGGCATACTT+AGG | + | 51773:6393-6412 | None:intergenic | 30.0% | |
| ACTTTGCTAACAATATTTGG+CGG | + | 51773:6282-6301 | None:intergenic | 30.0% | |
| ATAAGGAGATAGTTGTGTTA+GGG | - | 51773:6713-6732 | MS.gene072572:intron | 30.0% | |
| ATAATAATGCCTCCTTGAAA+AGG | + | 51773:6642-6661 | None:intergenic | 30.0% | |
| ATAGATTATGTGTTCGACTT+CGG | - | 51773:6614-6633 | MS.gene072572:intron | 30.0% | |
| ATATTAGGTTCTGTAGTTAG+TGG | + | 51773:6240-6259 | None:intergenic | 30.0% | |
| ATCTGACTATTTAGACTTGA+TGG | + | 51773:8047-8066 | None:intergenic | 30.0% | |
| CAAAACAACAAATCAAAGTG+GGG | + | 51773:6147-6166 | None:intergenic | 30.0% | |
| CAATATGACTTCCCAAATAA+CGG | + | 51773:7677-7696 | None:intergenic | 30.0% | |
| CATATATGAATGATTTCAGC+TGG | + | 51773:7016-7035 | None:intergenic | 30.0% | |
| CTTCATTATTGGCATACTTA+GGG | + | 51773:6392-6411 | None:intergenic | 30.0% | |
| GAACTTGTGAAACCTTATAT+CGG | - | 51773:7281-7300 | MS.gene072572:intron | 30.0% | |
| GAATTGAAGAAAAGGAAAGA+AGG | + | 51773:5113-5132 | None:intergenic | 30.0% | |
| GATTTGACTAAGTTATACGT+TGG | + | 51773:6748-6767 | None:intergenic | 30.0% | |
| GCAAATGAAAGAGTTAAATC+AGG | + | 51773:7490-7509 | None:intergenic | 30.0% | |
| GTAATCAATGATTATCTTGG+CGG | - | 51773:5475-5494 | MS.gene072572:CDS | 30.0% | |
| GTGTGTTAAAATCTGTTTCA+TGG | - | 51773:7704-7723 | MS.gene072572:intron | 30.0% | |
| TATAAGGAGATAGTTGTGTT+AGG | - | 51773:6712-6731 | MS.gene072572:intron | 30.0% | |
| TGCATAAATACAGACTACTA+AGG | + | 51773:7348-7367 | None:intergenic | 30.0% | |
| TGTAGATCTTGTAGAACAAA+TGG | - | 51773:6416-6435 | MS.gene072572:intron | 30.0% | |
| TTCCTATGAATTGCAAATCA+TGG | + | 51773:5392-5411 | None:intergenic | 30.0% | |
| ! | AACTGTGGCTTTACATATAT+TGG | + | 51773:7806-7825 | None:intergenic | 30.0% |
| ! | ACTGTGGCTTTACATATATT+GGG | + | 51773:7805-7824 | None:intergenic | 30.0% |
| ! | AGGATTTGAAACCGTTATTT+GGG | - | 51773:7663-7682 | MS.gene072572:intron | 30.0% |
| ! | ATTAGCTTAAATTGTCCATC+AGG | + | 51773:7601-7620 | None:intergenic | 30.0% |
| ! | GCTAAAAATTTGGTTCATTC+AGG | - | 51773:7398-7417 | MS.gene072572:intron | 30.0% |
| ! | GTTTTTGTTAATGTAGCTGT+TGG | - | 51773:6191-6210 | MS.gene072572:intron | 30.0% |
| ! | TAGGATTTGAAACCGTTATT+TGG | - | 51773:7662-7681 | MS.gene072572:intron | 30.0% |
| ! | TTTTGGATTGATCGTAGTAT+AGG | - | 51773:5939-5958 | MS.gene072572:CDS | 30.0% |
| !! | ACTTGAAAAAGATAATGGGT+TGG | + | 51773:5289-5308 | None:intergenic | 30.0% |
| !! | TATTTTTGCACCTCTAATCT+GGG | - | 51773:6890-6909 | MS.gene072572:intron | 30.0% |
| AAAACCTTTGTAGAAACGGT+AGG | + | 51773:8313-8332 | None:intergenic | 35.0% | |
| AAACCTTTGTAGAAACGGTA+GGG | + | 51773:8312-8331 | None:intergenic | 35.0% | |
| AAGCTGAAACTGAACGTTAA+CGG | + | 51773:7903-7922 | None:intergenic | 35.0% | |
| ACTAATGTTCCAGACATTGA+GGG | + | 51773:8174-8193 | None:intergenic | 35.0% | |
| AGAATTTGATTGGATTCCCA+AGG | + | 51773:7565-7584 | None:intergenic | 35.0% | |
| ATCATCTCTTGCAGGATATT+AGG | + | 51773:6255-6274 | None:intergenic | 35.0% | |
| ATCCCAAAACCAGTTACAAA+TGG | + | 51773:5227-5246 | None:intergenic | 35.0% | |
| ATTATTGGCATACTTAGGGT+CGG | + | 51773:6388-6407 | None:intergenic | 35.0% | |
| CTAAAAGCCACTTGAAATGT+GGG | + | 51773:8231-8250 | None:intergenic | 35.0% | |
| CTATGTCTGATGTCCTAATT+AGG | - | 51773:7643-7662 | MS.gene072572:intron | 35.0% | |
| CTCGAAAACCTTTGTAGAAA+CGG | + | 51773:8317-8336 | None:intergenic | 35.0% | |
| GACATGCCATCTTAATGTAA+TGG | - | 51773:7841-7860 | MS.gene072572:intron | 35.0% | |
| GCATTGAAACTTCAGATTGA+AGG | + | 51773:6038-6057 | None:intergenic | 35.0% | |
| GGCATGTATTATTACCTCAA+TGG | + | 51773:5371-5390 | None:intergenic | 35.0% | |
| GTGTATAAGTTAAGGACACA+AGG | + | 51773:6955-6974 | None:intergenic | 35.0% | |
| TCTGATAGATCACGATGTAA+AGG | + | 51773:8110-8129 | None:intergenic | 35.0% | |
| TGCCAACCATTACATTAAGA+TGG | + | 51773:7850-7869 | None:intergenic | 35.0% | |
| TGCCATCTTAATGTAATGGT+TGG | - | 51773:7845-7864 | MS.gene072572:intron | 35.0% | |
| TTGGATGAGATGATAGACAA+TGG | - | 51773:6210-6229 | MS.gene072572:intron | 35.0% | |
| TTTCAGAGCAAACGTTACAA+GGG | + | 51773:6092-6111 | None:intergenic | 35.0% | |
| ! | AAATTTGGTTCATTCAGGGA+TGG | - | 51773:7403-7422 | MS.gene072572:intron | 35.0% |
| ! | AATAACAGGTTGTTGCTTGA+AGG | + | 51773:5260-5279 | None:intergenic | 35.0% |
| ! | ATTCTAGAGAAACAACTCAC+TGG | - | 51773:5184-5203 | MS.gene072572:CDS | 35.0% |
| ! | ATTTTTCTTCTCTCCGATTC+CGG | - | 51773:5072-5091 | MS.gene072572:CDS | 35.0% |
| ! | CTGTGGCTTTACATATATTG+GGG | + | 51773:7804-7823 | None:intergenic | 35.0% |
| ! | TGCCATGATTTGCAATTCAT+AGG | - | 51773:5387-5406 | MS.gene072572:intron | 35.0% |
| ! | TTTTCAGAGCAAACGTTACA+AGG | + | 51773:6093-6112 | None:intergenic | 35.0% |
| !! | GTATTTTTGCACCTCTAATC+TGG | - | 51773:6889-6908 | MS.gene072572:intron | 35.0% |
| !! | TTGTAGTCATTGTGCCATTT+GGG | - | 51773:5902-5921 | MS.gene072572:CDS | 35.0% |
| !!! | CTCCATTTGTAACTGGTTTT+GGG | - | 51773:5222-5241 | MS.gene072572:CDS | 35.0% |
| !!! | CTTTTTCAAGTTTTTCGCGA+TGG | - | 51773:5298-5317 | MS.gene072572:intron | 35.0% |
| AAGGCCGAAATCTAACACAA+GGG | + | 51773:7546-7565 | None:intergenic | 40.0% | |
| AGATCAGCTGATAAGATGCA+AGG | + | 51773:7929-7948 | None:intergenic | 40.0% | |
| AGATGTACCAACCAAAGAGT+AGG | - | 51773:7074-7093 | MS.gene072572:CDS | 40.0% | |
| AGCTTAAATTGTCCATCAGG+AGG | + | 51773:7598-7617 | None:intergenic | 40.0% | |
| AGTTGAAATGCCACCTTTGA+TGG | - | 51773:5345-5364 | MS.gene072572:intron | 40.0% | |
| ATAGCAGGACTAACATAGGT+AGG | + | 51773:6669-6688 | None:intergenic | 40.0% | |
| ATCTCCTTATATCCGAGCTT+GGG | + | 51773:6703-6722 | None:intergenic | 40.0% | |
| ATGCATAGCAGGACTAACAT+AGG | + | 51773:6673-6692 | None:intergenic | 40.0% | |
| ATGTACCAACCAAAGAGTAG+GGG | - | 51773:7076-7095 | MS.gene072572:CDS | 40.0% | |
| ATTACCTCAATGGCCATCAA+AGG | + | 51773:5361-5380 | None:intergenic | 40.0% | |
| ATTAGGACATCAGACATAGC+TGG | + | 51773:7642-7661 | None:intergenic | 40.0% | |
| ATTAGTGCTTGAGACTGGAA+TGG | - | 51773:8188-8207 | MS.gene072572:CDS | 40.0% | |
| CAAGTAAATTCCCACATCAC+TGG | - | 51773:7460-7479 | MS.gene072572:intron | 40.0% | |
| CACTAATGTTCCAGACATTG+AGG | + | 51773:8175-8194 | None:intergenic | 40.0% | |
| CCGTCCACAACAATAACAAT+CGG | - | 51773:6000-6019 | MS.gene072572:intron | 40.0% | |
| CCTAAAAGCCACTTGAAATG+TGG | + | 51773:8232-8251 | None:intergenic | 40.0% | |
| CGATCTTGATTCATTCAGAG+AGG | - | 51773:5159-5178 | MS.gene072572:CDS | 40.0% | |
| CGTATTTGATTCATGCCGTA+AGG | + | 51773:6770-6789 | None:intergenic | 40.0% | |
| CTAATGTTCCAGACATTGAG+GGG | + | 51773:8173-8192 | None:intergenic | 40.0% | |
| CTCACATCATCAAGGATTGA+AGG | + | 51773:7517-7536 | None:intergenic | 40.0% | |
| CTGGTGAAGTGTGAGATTAA+TGG | - | 51773:7430-7449 | MS.gene072572:intron | 40.0% | |
| CTGTTCAGTAAGTCAGCAAA+AGG | + | 51773:7237-7256 | None:intergenic | 40.0% | |
| CTTTGAGCAAAGTTATGAGG+AGG | + | 51773:5979-5998 | None:intergenic | 40.0% | |
| GAAACAAAGTCAAGCCCAAA+TGG | + | 51773:5919-5938 | None:intergenic | 40.0% | |
| GAAGTGTGAGATTAATGGTG+AGG | - | 51773:7435-7454 | MS.gene072572:intron | 40.0% | |
| GATGTACCAACCAAAGAGTA+GGG | - | 51773:7075-7094 | MS.gene072572:CDS | 40.0% | |
| GGACTTTGAGCAAAGTTATG+AGG | + | 51773:5982-6001 | None:intergenic | 40.0% | |
| TAATGTTCCAGACATTGAGG+GGG | + | 51773:8172-8191 | None:intergenic | 40.0% | |
| TACAAATGGAGCGATCAACA+CGG | + | 51773:5213-5232 | None:intergenic | 40.0% | |
| TATCTCCTTATATCCGAGCT+TGG | + | 51773:6704-6723 | None:intergenic | 40.0% | |
| TCCACCCTTGTGTTAGATTT+CGG | - | 51773:7539-7558 | MS.gene072572:intron | 40.0% | |
| TGAATGATTTCAGCTGGCTA+CGG | + | 51773:7010-7029 | None:intergenic | 40.0% | |
| TGACTTCAAATTCACCTGCT+CGG | + | 51773:8347-8366 | None:intergenic | 40.0% | |
| TGATCTATCAGACATGCACT+TGG | - | 51773:8118-8137 | MS.gene072572:CDS | 40.0% | |
| TGGTCTGCAAATAGACAAAC+TGG | - | 51773:8272-8291 | MS.gene072572:intron | 40.0% | |
| TGTCACACACTGATATGTGT+CGG | - | 51773:5634-5653 | MS.gene072572:CDS | 40.0% | |
| TGTCTTTCCCACATTTCAAG+TGG | - | 51773:8221-8240 | MS.gene072572:CDS | 40.0% | |
| TTACATCAGCTACCCTACAA+AGG | + | 51773:5459-5478 | None:intergenic | 40.0% | |
| TTAGTTATCCCCCTACTCTT+TGG | + | 51773:7088-7107 | None:intergenic | 40.0% | |
| TTGATCGCTCCATTTGTAAC+TGG | - | 51773:5215-5234 | MS.gene072572:CDS | 40.0% | |
| TTGGTTACTGTATAACCTGC+TGG | - | 51773:6867-6886 | MS.gene072572:intron | 40.0% | |
| TTGTGTTAGATTTCGGCCTT+GGG | - | 51773:7546-7565 | MS.gene072572:intron | 40.0% | |
| ! | AAAGCTTTATCCCACTGAGT+AGG | + | 51773:6804-6823 | None:intergenic | 40.0% |
| ! | AAAGTCTTAAGCGTTGTGAC+TGG | - | 51773:6297-6316 | MS.gene072572:intron | 40.0% |
| ! | AAGCTTTATCCCACTGAGTA+GGG | + | 51773:6803-6822 | None:intergenic | 40.0% |
| ! | CCGATTGTTATTGTTGTGGA+CGG | + | 51773:6003-6022 | None:intergenic | 40.0% |
| ! | CTTGTAGTCATTGTGCCATT+TGG | - | 51773:5901-5920 | MS.gene072572:CDS | 40.0% |
| ! | GTGTCCGATTGTTATTGTTG+TGG | + | 51773:6007-6026 | None:intergenic | 40.0% |
| ! | TTTTTCTTCTCTCCGATTCC+GGG | - | 51773:5073-5092 | MS.gene072572:CDS | 40.0% |
| !! | CCACATTTCAAGTGGCTTTT+AGG | - | 51773:8229-8248 | MS.gene072572:CDS | 40.0% |
| !! | CTTCAATCCTTGATGATGTG+AGG | - | 51773:7515-7534 | MS.gene072572:intron | 40.0% |
| !! | GCTCCATTTGTAACTGGTTT+TGG | - | 51773:5221-5240 | MS.gene072572:CDS | 40.0% |
| !! | GGGCTTGACTTTGTTTCTTT+TGG | - | 51773:5922-5941 | MS.gene072572:CDS | 40.0% |
| !!! | CAAGTGGCTTTTAGGATCAT+GGG | - | 51773:8237-8256 | MS.gene072572:CDS | 40.0% |
| !!! | CTTTTGCTGACTTACTGAAC+AGG | - | 51773:7235-7254 | MS.gene072572:intron | 40.0% |
| !!! | TCAAGTGGCTTTTAGGATCA+TGG | - | 51773:8236-8255 | MS.gene072572:CDS | 40.0% |
| !!! | TCGCGATGGAATCACTTTTT+TGG | - | 51773:5312-5331 | MS.gene072572:intron | 40.0% |
| AAGGGTTAACTGAACTCACC+CGG | + | 51773:5094-5113 | None:intergenic | 45.0% | |
| AATCAGGTAGACCAGTGATG+TGG | + | 51773:7474-7493 | None:intergenic | 45.0% | |
| ACGGAATCAACTGTCTTTCC+AGG | + | 51773:7884-7903 | None:intergenic | 45.0% | |
| ATAAATGGCAAGGTACGCAG+CGG | - | 51773:7051-7070 | MS.gene072572:CDS | 45.0% | |
| ATCAGGTAGACCAGTGATGT+GGG | + | 51773:7473-7492 | None:intergenic | 45.0% | |
| ATGAGGAGGAGATGACAGAT+AGG | + | 51773:5965-5984 | None:intergenic | 45.0% | |
| CAAGGCCGAAATCTAACACA+AGG | + | 51773:7547-7566 | None:intergenic | 45.0% | |
| CTTCAGATTGAAGGTGAGAC+TGG | + | 51773:6029-6048 | None:intergenic | 45.0% | |
| CTTGTGTTAGATTTCGGCCT+TGG | - | 51773:7545-7564 | MS.gene072572:intron | 45.0% | |
| CTTTCATTTGTGCCTCCTGA+TGG | - | 51773:7583-7602 | MS.gene072572:intron | 45.0% | |
| GACTTCAAATTCACCTGCTC+GGG | + | 51773:8346-8365 | None:intergenic | 45.0% | |
| GCTGATCTGACTTCAACTCA+TGG | - | 51773:7941-7960 | MS.gene072572:CDS | 45.0% | |
| GGAACATTAGTGCTTGAGAC+TGG | - | 51773:8183-8202 | MS.gene072572:CDS | 45.0% | |
| GTACCCTACCGTTTCTACAA+AGG | - | 51773:8306-8325 | MS.gene072572:intron | 45.0% | |
| GTTGGCATGAGAAATGATCC+TGG | - | 51773:7863-7882 | MS.gene072572:intron | 45.0% | |
| TAACTGAACTCACCCGGAAT+CGG | + | 51773:5088-5107 | None:intergenic | 45.0% | |
| TCAGCTGATAAGATGCAAGG+AGG | + | 51773:7926-7945 | None:intergenic | 45.0% | |
| TGAAAATGTTGCCTGAGTGC+TGG | - | 51773:6107-6126 | MS.gene072572:intron | 45.0% | |
| TGTACCAACCAAAGAGTAGG+GGG | - | 51773:7077-7096 | MS.gene072572:CDS | 45.0% | |
| TTAGTCCTGCTATGCATAGC+AGG | - | 51773:6676-6695 | MS.gene072572:intron | 45.0% | |
| TTAGTGCCAACCCAGATTAG+AGG | + | 51773:6903-6922 | None:intergenic | 45.0% | |
| TTATCCCCCTACTCTTTGGT+TGG | + | 51773:7084-7103 | None:intergenic | 45.0% | |
| TTCATTCAGGGATGGTACTC+TGG | - | 51773:7411-7430 | MS.gene072572:intron | 45.0% | |
| TTTATCCCACTGAGTAGGGT+CGG | + | 51773:6799-6818 | None:intergenic | 45.0% | |
| TTTGCACCTCTAATCTGGGT+TGG | - | 51773:6894-6913 | MS.gene072572:intron | 45.0% | |
| ! | AAGCCACAGTTGACTTCAGA+TGG | - | 51773:7815-7834 | MS.gene072572:intron | 45.0% |
| ! | ACTGATATGTGTCGGTGCAA+TGG | - | 51773:5642-5661 | MS.gene072572:intron | 45.0% |
| ! | AGAGGTGCAAAAATACCAGC+AGG | + | 51773:6885-6904 | None:intergenic | 45.0% |
| ! | ATTGAGGGGGCTTTATCCTT+TGG | + | 51773:8159-8178 | None:intergenic | 45.0% |
| ! | CACAGTTGACTTCAGATGGT+GGG | - | 51773:7819-7838 | MS.gene072572:intron | 45.0% |
| ! | GAGCAGGTGAATTTGAAGTC+AGG | - | 51773:8346-8365 | MS.gene072572:CDS | 45.0% |
| ! | GGTTGTTGCTTGAAGGAATG+AGG | + | 51773:5253-5272 | None:intergenic | 45.0% |
| ! | TCGACTTCGGTTCCTTTTCA+AGG | - | 51773:6627-6646 | MS.gene072572:intron | 45.0% |
| ! | TTGAGGGGGCTTTATCCTTT+GGG | + | 51773:8158-8177 | None:intergenic | 45.0% |
| !! | ACTTCGGTTCCTTTTCAAGG+AGG | - | 51773:6630-6649 | MS.gene072572:intron | 45.0% |
| !! | TGGGTTGGTGAAGCAATAAC+AGG | + | 51773:5274-5293 | None:intergenic | 45.0% |
| !!! | ATTCATTTATTTTTAAATTA+TGG | - | 51773:6512-6531 | MS.gene072572:intron | 5.0% |
| !!! | ATTTTAAGAAAATAAAAATT+TGG | + | 51773:7735-7754 | None:intergenic | 5.0% |
| !!! | TTTTAAGAAAATAAAAATTT+GGG | + | 51773:7734-7753 | None:intergenic | 5.0% |
| AATAGCCGACCCTACTCAGT+GGG | - | 51773:6791-6810 | MS.gene072572:intron | 50.0% | |
| ACACAAGATGCTGTACTGCC+TGG | + | 51773:6351-6370 | None:intergenic | 50.0% | |
| ACCTCAATGGCCATCAAAGG+TGG | + | 51773:5358-5377 | None:intergenic | 50.0% | |
| AGGTCCCAAGCTCGGATATA+AGG | - | 51773:6696-6715 | MS.gene072572:intron | 50.0% | |
| CAGACATGCACTTGGTCCAT+TGG | - | 51773:8126-8145 | MS.gene072572:CDS | 50.0% | |
| CTTGTTCGCAACAGCATAGG+AGG | - | 51773:5801-5820 | MS.gene072572:intron | 50.0% | |
| GATAAAGCCCCCTCAATGTC+TGG | - | 51773:8162-8181 | MS.gene072572:CDS | 50.0% | |
| GCACTTGTTCGCAACAGCAT+AGG | - | 51773:5798-5817 | MS.gene072572:intron | 50.0% | |
| GCCGAAATCTAACACAAGGG+TGG | + | 51773:7543-7562 | None:intergenic | 50.0% | |
| GGTGGAACCTCACATCATCA+AGG | + | 51773:7525-7544 | None:intergenic | 50.0% | |
| GTACAGCATCTTGTGTTCCC+TGG | - | 51773:6355-6374 | MS.gene072572:intron | 50.0% | |
| TAATAGCCGACCCTACTCAG+TGG | - | 51773:6790-6809 | MS.gene072572:intron | 50.0% | |
| TGTCAGCTGCGGTATTGTGT+AGG | - | 51773:5611-5630 | MS.gene072572:CDS | 50.0% | |
| ! | CCACAGTTGACTTCAGATGG+TGG | - | 51773:7818-7837 | MS.gene072572:intron | 50.0% |
| ! | CCACCATCTGAAGTCAACTG+TGG | + | 51773:7821-7840 | None:intergenic | 50.0% |
| !! | GGGCTTTATCCTTTGGGATC+CGG | + | 51773:8152-8171 | None:intergenic | 50.0% |
| !! | TATTGGGTTGGTGTCAGCTG+CGG | - | 51773:5600-5619 | MS.gene072572:CDS | 50.0% |
| AATGTGAGCGACACGCTTCC+AGG | - | 51773:6330-6349 | MS.gene072572:intron | 55.0% | |
| AGAAAAGCCTGCCAGCACTC+AGG | + | 51773:6121-6140 | None:intergenic | 55.0% | |
| CATGCACTTGGTCCATTGGC+CGG | - | 51773:8130-8149 | MS.gene072572:CDS | 55.0% | |
| GCGGAGCTATCATCTCTTGC+AGG | + | 51773:6263-6282 | None:intergenic | 55.0% | |
| TGCATAGCAGGTCCCAAGCT+CGG | - | 51773:6688-6707 | MS.gene072572:intron | 55.0% | |
| TGGGACCTGCTATGCATAGC+AGG | + | 51773:6684-6703 | None:intergenic | 55.0% | |
| TTAGGGTCGGCTGTTCTCCA+GGG | + | 51773:6375-6394 | None:intergenic | 55.0% | |
| TTTCGAGCTCTTACCCGAGC+AGG | - | 51773:8330-8349 | MS.gene072572:intron | 55.0% | |
| ! | GCCACCTTTGATGGCCATTG+AGG | - | 51773:5354-5373 | MS.gene072572:intron | 55.0% |
| ! | TGTGTCGGTGCAATGGTCGT+TGG | - | 51773:5649-5668 | MS.gene072572:intron | 55.0% |
| !! | AATGTTGCCTGAGTGCTGGC+AGG | - | 51773:6111-6130 | MS.gene072572:intron | 55.0% |
| !! | ATCATGGGTGTCGCTCTCTC+TGG | - | 51773:8252-8271 | MS.gene072572:intron | 55.0% |
| !! | ATCCTTTGGGATCCGGCCAA+TGG | + | 51773:8145-8164 | None:intergenic | 55.0% |
| CTTAGGGTCGGCTGTTCTCC+AGG | + | 51773:6376-6395 | None:intergenic | 60.0% | |
| GTCCATTGGCCGGATCCCAA+AGG | - | 51773:8140-8159 | MS.gene072572:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51773 | gene | 5060 | 8374 | 5060 | ID=MS.gene072572 |
| 51773 | mRNA | 5060 | 8374 | 5060 | ID=MS.gene072572.t1;Parent=MS.gene072572 |
| 51773 | exon | 8340 | 8374 | 8340 | ID=MS.gene072572.t1.exon1;Parent=MS.gene072572.t1 |
| 51773 | CDS | 8340 | 8374 | 8340 | ID=cds.MS.gene072572.t1;Parent=MS.gene072572.t1 |
| 51773 | exon | 8059 | 8257 | 8059 | ID=MS.gene072572.t1.exon2;Parent=MS.gene072572.t1 |
| 51773 | CDS | 8059 | 8257 | 8059 | ID=cds.MS.gene072572.t1;Parent=MS.gene072572.t1 |
| 51773 | exon | 7891 | 7980 | 7891 | ID=MS.gene072572.t1.exon3;Parent=MS.gene072572.t1 |
| 51773 | CDS | 7891 | 7980 | 7891 | ID=cds.MS.gene072572.t1;Parent=MS.gene072572.t1 |
| 51773 | exon | 6980 | 7227 | 6980 | ID=MS.gene072572.t1.exon4;Parent=MS.gene072572.t1 |
| 51773 | CDS | 6980 | 7227 | 6980 | ID=cds.MS.gene072572.t1;Parent=MS.gene072572.t1 |
| 51773 | exon | 5805 | 6014 | 5805 | ID=MS.gene072572.t1.exon5;Parent=MS.gene072572.t1 |
| 51773 | CDS | 5805 | 6014 | 5805 | ID=cds.MS.gene072572.t1;Parent=MS.gene072572.t1 |
| 51773 | exon | 5446 | 5653 | 5446 | ID=MS.gene072572.t1.exon6;Parent=MS.gene072572.t1 |
| 51773 | CDS | 5446 | 5653 | 5446 | ID=cds.MS.gene072572.t1;Parent=MS.gene072572.t1 |
| 51773 | exon | 5060 | 5305 | 5060 | ID=MS.gene072572.t1.exon7;Parent=MS.gene072572.t1 |
| 51773 | CDS | 5060 | 5305 | 5060 | ID=cds.MS.gene072572.t1;Parent=MS.gene072572.t1 |
| Gene Sequence |
| Protein sequence |
