Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027687.t1 | XP_003613166.1 | 100 | 428 | 0 | 0 | 1 | 428 | 1 | 428 | 6.20E-221 | 776.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027687.t1 | O22715 | 83.4 | 428 | 71 | 0 | 1 | 428 | 1 | 428 | 1.8e-208 | 726.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027687.t1 | G7K043 | 100.0 | 428 | 0 | 0 | 1 | 428 | 1 | 428 | 4.4e-221 | 776.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027687 | MS.gene010105 | PPI |
| MS.gene027687 | MS.gene050768 | PPI |
| MS.gene027687 | MS.gene021005 | PPI |
| MS.gene027687 | MS.gene003372 | PPI |
| MS.gene027687 | MS.gene75781 | PPI |
| MS.gene027687 | MS.gene052309 | PPI |
| MS.gene027687 | MS.gene050771 | PPI |
| MS.gene027687 | MS.gene054375 | PPI |
| MS.gene027687 | MS.gene031829 | PPI |
| MS.gene027687 | MS.gene09656 | PPI |
| MS.gene027687 | MS.gene072572 | PPI |
| MS.gene027687 | MS.gene017498 | PPI |
| MS.gene027687 | MS.gene050001 | PPI |
| MS.gene027687 | MS.gene21470 | PPI |
| MS.gene23142 | MS.gene027687 | PPI |
| MS.gene015312 | MS.gene027687 | PPI |
| MS.gene027687 | MS.gene28922 | PPI |
| MS.gene027687 | MS.gene059672 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027687.t1 | MTR_5g033500 | 100.000 | 428 | 0 | 0 | 1 | 428 | 1 | 428 | 0.0 | 884 |
| MS.gene027687.t1 | MTR_8g069565 | 93.925 | 428 | 26 | 0 | 1 | 428 | 1 | 428 | 0.0 | 848 |
| MS.gene027687.t1 | MTR_5g033500 | 100.000 | 307 | 0 | 0 | 1 | 307 | 1 | 307 | 0.0 | 634 |
| MS.gene027687.t1 | MTR_5g014330 | 43.409 | 440 | 232 | 6 | 1 | 426 | 1 | 437 | 5.28e-125 | 369 |
| MS.gene027687.t1 | MTR_5g014330 | 41.439 | 403 | 219 | 6 | 1 | 389 | 1 | 400 | 9.68e-105 | 316 |
| MS.gene027687.t1 | MTR_3g112190 | 32.957 | 443 | 273 | 8 | 6 | 427 | 3 | 442 | 1.42e-79 | 253 |
| MS.gene027687.t1 | MTR_5g066050 | 33.040 | 454 | 267 | 10 | 6 | 427 | 3 | 451 | 1.05e-77 | 248 |
| MS.gene027687.t1 | MTR_5g066050 | 33.113 | 453 | 267 | 10 | 6 | 427 | 3 | 450 | 1.26e-77 | 248 |
| MS.gene027687.t1 | MTR_7g111870 | 25.843 | 445 | 267 | 11 | 7 | 426 | 4 | 410 | 1.80e-45 | 162 |
| MS.gene027687.t1 | MTR_7g111870 | 27.246 | 334 | 193 | 6 | 7 | 318 | 4 | 309 | 6.53e-42 | 151 |
| MS.gene027687.t1 | MTR_3g452810 | 78.788 | 66 | 13 | 1 | 49 | 113 | 19 | 84 | 2.27e-26 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027687.t1 | AT1G60780 | 89.720 | 428 | 44 | 0 | 1 | 428 | 1 | 428 | 0.0 | 825 |
| MS.gene027687.t1 | AT1G10730 | 85.280 | 428 | 63 | 0 | 1 | 428 | 1 | 428 | 0.0 | 785 |
| MS.gene027687.t1 | AT5G46630 | 43.409 | 440 | 232 | 5 | 1 | 426 | 1 | 437 | 1.22e-128 | 379 |
| MS.gene027687.t1 | AT5G46630 | 42.067 | 416 | 224 | 5 | 1 | 402 | 1 | 413 | 2.64e-115 | 345 |
| MS.gene027687.t1 | AT4G24550 | 31.429 | 455 | 272 | 8 | 6 | 427 | 4 | 451 | 1.57e-80 | 256 |
| MS.gene027687.t1 | AT4G24550 | 31.953 | 338 | 206 | 4 | 6 | 320 | 4 | 340 | 1.41e-63 | 209 |
| MS.gene027687.t1 | AT4G24550 | 31.953 | 338 | 206 | 4 | 6 | 320 | 4 | 340 | 2.10e-63 | 209 |
| MS.gene027687.t1 | AT1G56590 | 26.818 | 440 | 275 | 11 | 7 | 427 | 4 | 415 | 1.22e-44 | 160 |
Find 93 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACCGTATTTCACTGTTTC+TGG | 0.117972 | 5.2:+23559407 | MS.gene027687:CDS |
| TTTGCTTCCACCCAAATTAA+AGG | 0.175025 | 5.2:-23558813 | None:intergenic |
| TTCAGGTTAAGCCTTTAATT+TGG | 0.191238 | 5.2:+23558802 | MS.gene027687:intron |
| TATGAGCTAAGGCTTATTTA+AGG | 0.229610 | 5.2:+23560965 | MS.gene027687:CDS |
| AAAGAGTCGGATTGAAATTA+TGG | 0.266135 | 5.2:+23558851 | MS.gene027687:CDS |
| TGCTTCCTCATCTGTTATAC+TGG | 0.267401 | 5.2:-23559345 | None:intergenic |
| AAAAGCTAGGAGTCAGTTTA+AGG | 0.275911 | 5.2:+23558875 | MS.gene027687:CDS |
| TGAGCTACTTGATGAAATTA+TGG | 0.307055 | 5.2:+23556760 | MS.gene027687:CDS |
| TCAGGTTAAGCCTTTAATTT+GGG | 0.308649 | 5.2:+23558803 | MS.gene027687:intron |
| CCCATTGACGTTCGAACATT+AGG | 0.309842 | 5.2:-23559123 | None:intergenic |
| TAATTAGATCTGACGTTGTT+GGG | 0.327451 | 5.2:+23557085 | MS.gene027687:CDS |
| CACCAAACTCATTGATAAAC+AGG | 0.331688 | 5.2:+23556070 | MS.gene027687:CDS |
| TATTGAGAAGAGTGGGTATC+AGG | 0.353475 | 5.2:+23560904 | MS.gene027687:CDS |
| TTTCACTGTTTCTGGAATAC+AGG | 0.394135 | 5.2:+23559415 | MS.gene027687:CDS |
| AACCTGTTTATCAATGAGTT+TGG | 0.398256 | 5.2:-23556072 | None:intergenic |
| TTGAAGATTATTGAGAAGAG+TGG | 0.401908 | 5.2:+23560896 | MS.gene027687:CDS |
| TTAGGATTGGTTGCATCAAC+AGG | 0.412796 | 5.2:-23559105 | None:intergenic |
| CTTGATGAAATTATGGACTT+TGG | 0.414029 | 5.2:+23556767 | MS.gene027687:CDS |
| TCAAAGGCCGCATCCTCGTC+TGG | 0.420613 | 5.2:+23556000 | MS.gene027687:CDS |
| TAAGACTGATGCTTATAGAA+TGG | 0.429934 | 5.2:+23556832 | MS.gene027687:CDS |
| AAATGATAGAGTGTTATTAG+AGG | 0.432015 | 5.2:+23558382 | MS.gene027687:CDS |
| ATCTCAAATTTCACGCGTAT+AGG | 0.434573 | 5.2:-23559386 | None:intergenic |
| TCCTAATGTTCGAACGTCAA+TGG | 0.438449 | 5.2:+23559122 | MS.gene027687:CDS |
| AATTGGAAGAGGAATCGCTT+AGG | 0.448944 | 5.2:+23556461 | MS.gene027687:CDS |
| GATCCGGTTGTTTACGATAA+CGG | 0.462375 | 5.2:+23556209 | MS.gene027687:CDS |
| TTGGTTGCATCAACAGGAAC+AGG | 0.463558 | 5.2:-23559099 | None:intergenic |
| CCTAATGTTCGAACGTCAAT+GGG | 0.466244 | 5.2:+23559123 | MS.gene027687:CDS |
| CGTTCGATTTGATGACATAC+AGG | 0.467708 | 5.2:+23558653 | MS.gene027687:CDS |
| ATCTTTGCCTCGGTATATTG+AGG | 0.473686 | 5.2:-23556794 | None:intergenic |
| TTCGAAGATACCTTGCCTCC+AGG | 0.475747 | 5.2:-23559201 | None:intergenic |
| ACCACCGCATCATCAATGTC+AGG | 0.484386 | 5.2:+23555948 | None:intergenic |
| GAGTTTGGTGAAGAAACGTT+CGG | 0.488898 | 5.2:-23556057 | None:intergenic |
| TAGGGATAACTTTGTTGTTG+TGG | 0.491523 | 5.2:+23556480 | MS.gene027687:CDS |
| ATTGGAAGAGGAATCGCTTA+GGG | 0.493977 | 5.2:+23556462 | MS.gene027687:CDS |
| AGTTACTCAAAGACCTCCTA+TGG | 0.508336 | 5.2:+23556856 | MS.gene027687:CDS |
| ATTTCTTTCATCCCTCCTGA+TGG | 0.509512 | 5.2:+23558628 | MS.gene027687:CDS |
| ATCAAATCGAACGATCCATC+AGG | 0.513755 | 5.2:-23558643 | None:intergenic |
| GAAGAAACGTTCGGCTTCGA+TGG | 0.521450 | 5.2:-23556048 | None:intergenic |
| CTCACTTAAAATCTTTGCCT+CGG | 0.525393 | 5.2:-23556804 | None:intergenic |
| TGACGTTCGAACATTAGGAT+TGG | 0.528631 | 5.2:-23559118 | None:intergenic |
| GTGGGTATCAGGCTCTTCCA+TGG | 0.529881 | 5.2:+23560915 | MS.gene027687:CDS |
| TTAATTAGATCTGACGTTGT+TGG | 0.530637 | 5.2:+23557084 | MS.gene027687:CDS |
| TGGAAAATTAGATCCTTCCC+TGG | 0.532521 | 5.2:+23559183 | MS.gene027687:CDS |
| TGAAGATTATTGAGAAGAGT+GGG | 0.536978 | 5.2:+23560897 | MS.gene027687:CDS |
| AATATTCTTGTCAACAGCAA+TGG | 0.538919 | 5.2:+23557057 | MS.gene027687:CDS |
| CAAGGGAAAAGCGATAGACT+TGG | 0.539799 | 5.2:+23558421 | MS.gene027687:CDS |
| TTGAAATTATGGTAAAAGCT+AGG | 0.542366 | 5.2:+23558862 | MS.gene027687:CDS |
| TTTATGAAGGTGTGTCCGGT+TGG | 0.542485 | 5.2:+23558582 | MS.gene027687:intron |
| TGATGAACAATCTCAAGATC+CGG | 0.542836 | 5.2:+23556193 | MS.gene027687:CDS |
| GGTTAAGCCTTTAATTTGGG+TGG | 0.544300 | 5.2:+23558806 | MS.gene027687:intron |
| ACACCGTTATCGTAAACAAC+CGG | 0.544469 | 5.2:-23556212 | None:intergenic |
| GCACAAGGCCGAACAACCAA+GGG | 0.545496 | 5.2:+23558404 | MS.gene027687:CDS |
| GGCACAAGGCCGAACAACCA+AGG | 0.546561 | 5.2:+23558403 | MS.gene027687:CDS |
| CTGTTCCTCCTCGACATCAA+AGG | 0.548111 | 5.2:+23555984 | MS.gene027687:CDS |
| AATTAGATCTGACGTTGTTG+GGG | 0.549785 | 5.2:+23557086 | MS.gene027687:CDS |
| CGCGGTAGTCACGCCAGACG+AGG | 0.552252 | 5.2:-23556013 | None:intergenic |
| ATTCCAGAAACAGTGAAATA+CGG | 0.552635 | 5.2:-23559410 | None:intergenic |
| CAACTCAATCTCGACATTCG+TGG | 0.555014 | 5.2:-23559076 | None:intergenic |
| ATTGTTATGTATCTAACCCA+TGG | 0.558918 | 5.2:-23560932 | None:intergenic |
| TCGAAGATACCTTGCCTCCA+GGG | 0.564558 | 5.2:-23559200 | None:intergenic |
| TAGATCCTTCCCTGGAGGCA+AGG | 0.574949 | 5.2:+23559191 | MS.gene027687:CDS |
| TTGAAAAGCACTCAAAGAGT+CGG | 0.576501 | 5.2:+23558838 | MS.gene027687:CDS |
| GACATACAGGCTCAGTACAC+AGG | 0.577294 | 5.2:+23558666 | MS.gene027687:CDS |
| CCTCATCTGTTATACTGGGA+AGG | 0.577347 | 5.2:-23559340 | None:intergenic |
| AGATACCTTGCCTCCAGGGA+AGG | 0.578555 | 5.2:-23559196 | None:intergenic |
| GGTATGCCTGAGTGTAAACT+TGG | 0.578568 | 5.2:+23558356 | MS.gene027687:CDS |
| TGGGTATCAGGCTCTTCCAT+GGG | 0.582492 | 5.2:+23560916 | MS.gene027687:CDS |
| AGTCACGCCAGACGAGGATG+CGG | 0.585775 | 5.2:-23556007 | None:intergenic |
| CCACCGCATCATCAATGTCA+GGG | 0.593019 | 5.2:+23555949 | None:intergenic |
| ACAGCATTAGTCACTGCCAT+AGG | 0.595173 | 5.2:-23556872 | None:intergenic |
| GCTTCCTCATCTGTTATACT+GGG | 0.596982 | 5.2:-23559344 | None:intergenic |
| GTTAGATACATAACAATGGC+GGG | 0.597541 | 5.2:+23560938 | MS.gene027687:CDS |
| GCATTAGTCACTGCCATAGG+AGG | 0.598918 | 5.2:-23556869 | None:intergenic |
| CAGTGACTAATGCTGTGTCT+TGG | 0.615245 | 5.2:+23556879 | MS.gene027687:CDS |
| AAATCGAACGATCCATCAGG+AGG | 0.615509 | 5.2:-23558640 | None:intergenic |
| TTTAAACCAAGTTTACACTC+AGG | 0.615721 | 5.2:-23558362 | None:intergenic |
| GCTGTGTCTTGGCGAAGTGA+AGG | 0.616774 | 5.2:+23556890 | MS.gene027687:CDS |
| CTGTGTCTTGGCGAAGTGAA+GGG | 0.618939 | 5.2:+23556891 | MS.gene027687:CDS |
| GAAACGTTCGGCTTCGATGG+CGG | 0.623972 | 5.2:-23556045 | None:intergenic |
| CCTTCCCAGTATAACAGATG+AGG | 0.630177 | 5.2:+23559340 | MS.gene027687:CDS |
| GGATGCGGCCTTTGATGTCG+AGG | 0.631816 | 5.2:-23555992 | None:intergenic |
| TGGCGGGAGAGTATGAGCTA+AGG | 0.642064 | 5.2:+23560954 | MS.gene027687:CDS |
| CACCGCATCATCAATGTCAG+GGG | 0.662861 | 5.2:+23555950 | None:intergenic |
| GGTTAGATACATAACAATGG+CGG | 0.663619 | 5.2:+23560937 | MS.gene027687:CDS |
| CTCGTCTGGCGTGACTACCG+CGG | 0.677454 | 5.2:+23556014 | MS.gene027687:CDS |
| GGAGTCAGTTTAAGGAACGT+AGG | 0.677567 | 5.2:+23558883 | MS.gene027687:CDS |
| TGCGGCCTTTGATGTCGAGG+AGG | 0.677780 | 5.2:-23555989 | None:intergenic |
| TGGTTATCCTCAATATACCG+AGG | 0.679386 | 5.2:+23556787 | MS.gene027687:CDS |
| ATGGGTTAGATACATAACAA+TGG | 0.684310 | 5.2:+23560934 | MS.gene027687:CDS |
| AATCGAACGATCCATCAGGA+GGG | 0.687261 | 5.2:-23558639 | None:intergenic |
| AAAATTAGATCCTTCCCTGG+AGG | 0.719743 | 5.2:+23559186 | MS.gene027687:CDS |
| CGATGGCGGAGACGTCGCCG+CGG | 0.726811 | 5.2:-23556031 | None:intergenic |
| AGAGTGTTATTAGAGGCACA+AGG | 0.730481 | 5.2:+23558389 | MS.gene027687:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTTAAAATTTACATTTT+TGG | + | chr5.2:23557788-23557807 | MS.gene027687:intron | 10.0% |
| !!! | AGTTTAAAATTTACATTTTT+GGG | + | chr5.2:23557789-23557808 | MS.gene027687:intron | 10.0% |
| !!! | ATTTTTTTAAAAAAACTGTT+TGG | - | chr5.2:23558048-23558067 | None:intergenic | 10.0% |
| !!! | TTTTCTTATATTCTAAATAT+TGG | + | chr5.2:23559456-23559475 | MS.gene027687:intron | 10.0% |
| !! | ATAAAATAAATCCTATTAGT+TGG | - | chr5.2:23559049-23559068 | None:intergenic | 15.0% |
| !! | TCAAATTATACATAAAATCA+CGG | - | chr5.2:23556145-23556164 | None:intergenic | 15.0% |
| !! | TGAAAATTTATGAATATCAA+TGG | - | chr5.2:23559721-23559740 | None:intergenic | 15.0% |
| !! | TGTATAAATAGAAGAATATA+TGG | + | chr5.2:23557314-23557333 | MS.gene027687:intron | 15.0% |
| !! | TTCTATTAAATCTAATTTCT+GGG | + | chr5.2:23557443-23557462 | MS.gene027687:intron | 15.0% |
| !! | TTTCTATTAAATCTAATTTC+TGG | + | chr5.2:23557442-23557461 | MS.gene027687:intron | 15.0% |
| !!! | AATATAAGAAAATCATGTTT+TGG | - | chr5.2:23559448-23559467 | None:intergenic | 15.0% |
| !!! | ATTTTACTTCAATTTGTTTT+CGG | + | chr5.2:23559691-23559710 | MS.gene027687:intron | 15.0% |
| !!! | TAAAAAGTTACTATTTTTAG+TGG | - | chr5.2:23559943-23559962 | None:intergenic | 15.0% |
| !!! | TAACATTTTGATTATTTCAA+TGG | + | chr5.2:23559639-23559658 | MS.gene027687:intron | 15.0% |
| !!! | TATGCTTTTAAAAAAATGAA+AGG | + | chr5.2:23557983-23558002 | MS.gene027687:intron | 15.0% |
| !!! | TATTGTGTTGTTTTAATTTT+TGG | + | chr5.2:23556704-23556723 | MS.gene027687:intron | 15.0% |
| !!! | TTAGTATGTTTTAATAGTTT+AGG | + | chr5.2:23560665-23560684 | MS.gene027687:intron | 15.0% |
| !!! | TTGAAAATTATGCATAATTT+TGG | + | chr5.2:23560740-23560759 | MS.gene027687:intron | 15.0% |
| !!! | TTGTTTTTTATGAAACATTA+GGG | + | chr5.2:23560475-23560494 | MS.gene027687:intron | 15.0% |
| !!! | TTTGTTTTTTATGAAACATT+AGG | + | chr5.2:23560474-23560493 | MS.gene027687:intron | 15.0% |
| !! | AAATATATAAGAACCAGTTT+AGG | - | chr5.2:23557595-23557614 | None:intergenic | 20.0% |
| !! | AATAGTTTAGGTACTAAATT+AGG | + | chr5.2:23560677-23560696 | MS.gene027687:intron | 20.0% |
| !! | AATTTCACAGATATATCATA+CGG | - | chr5.2:23560785-23560804 | None:intergenic | 20.0% |
| !! | ACTATTCAAACATACTAAAA+AGG | + | chr5.2:23560083-23560102 | MS.gene027687:intron | 20.0% |
| !! | ATAGTTTAGGTACTAAATTA+GGG | + | chr5.2:23560678-23560697 | MS.gene027687:intron | 20.0% |
| !! | ATCAAATTTAGGTATCAAAA+TGG | - | chr5.2:23559251-23559270 | None:intergenic | 20.0% |
| !! | GATTAATCACAATCAAATTT+AGG | - | chr5.2:23559262-23559281 | None:intergenic | 20.0% |
| !! | TAAAGAGTAAACCATTAATT+TGG | + | chr5.2:23559833-23559852 | MS.gene027687:intron | 20.0% |
| !! | TAACTTGGGAATAATTTAAT+GGG | - | chr5.2:23557930-23557949 | None:intergenic | 20.0% |
| !! | TATGTTTATGAGTTGTAATT+TGG | + | chr5.2:23556964-23556983 | MS.gene027687:intron | 20.0% |
| !! | TCAATTTCAAATTGCAAAAT+AGG | - | chr5.2:23560385-23560404 | None:intergenic | 20.0% |
| !! | TCTTATATTCTAAATATTGG+AGG | + | chr5.2:23559459-23559478 | MS.gene027687:intron | 20.0% |
| !! | TGTAAATGAAATTAGCAATT+TGG | + | chr5.2:23557675-23557694 | MS.gene027687:intron | 20.0% |
| !! | TTAAATTATTCCCAAGTTAA+AGG | + | chr5.2:23557931-23557950 | MS.gene027687:intron | 20.0% |
| !! | TTTAGTATGTTTGAATAGTT+GGG | - | chr5.2:23560082-23560101 | None:intergenic | 20.0% |
| !! | TTTCATAAAAAACAAAAACG+TGG | - | chr5.2:23560470-23560489 | None:intergenic | 20.0% |
| !!! | AAAAGCATACAAAATTTCAT+GGG | - | chr5.2:23557972-23557991 | None:intergenic | 20.0% |
| !!! | AACTTATAATTCACACATTT+TGG | - | chr5.2:23560539-23560558 | None:intergenic | 20.0% |
| !!! | ACTTTTCTATTTTTGTATTC+AGG | + | chr5.2:23557008-23557027 | MS.gene027687:intron | 20.0% |
| !!! | GTTGTTTTAATTTTTGGATT+TGG | + | chr5.2:23556710-23556729 | MS.gene027687:intron | 20.0% |
| !!! | TAAAAGCATACAAAATTTCA+TGG | - | chr5.2:23557973-23557992 | None:intergenic | 20.0% |
| !!! | TAAGCATTATTTTGAAGAAT+TGG | + | chr5.2:23556444-23556463 | MS.gene027687:CDS | 20.0% |
| !!! | TTAACTTGGGAATAATTTAA+TGG | - | chr5.2:23557931-23557950 | None:intergenic | 20.0% |
| !!! | TTAATTTTTGGATTTGGATT+TGG | + | chr5.2:23556716-23556735 | MS.gene027687:intron | 20.0% |
| !!! | TTTCTTCTCTATTTTTTTCT+TGG | + | chr5.2:23558937-23558956 | MS.gene027687:intron | 20.0% |
| !!! | TTTTAGTATGTTTGAATAGT+TGG | - | chr5.2:23560083-23560102 | None:intergenic | 20.0% |
| ! | AAACTTCATTACAAAAAACC+AGG | - | chr5.2:23560211-23560230 | None:intergenic | 25.0% |
| ! | AACGATATACATTAGAGATT+AGG | + | chr5.2:23557561-23557580 | MS.gene027687:intron | 25.0% |
| ! | AATCAAAATGTTAACAGAGA+CGG | - | chr5.2:23559632-23559651 | None:intergenic | 25.0% |
| ! | AATGAGGTAGTTATTATTAG+AGG | + | chr5.2:23556929-23556948 | MS.gene027687:intron | 25.0% |
| ! | AATTAGTCCCTAAACTATTA+AGG | + | chr5.2:23559881-23559900 | MS.gene027687:intron | 25.0% |
| ! | ACGATATACATTAGAGATTA+GGG | + | chr5.2:23557562-23557581 | MS.gene027687:intron | 25.0% |
| ! | ATAGAAGAATATATGGATAG+AGG | + | chr5.2:23557321-23557340 | MS.gene027687:intron | 25.0% |
| ! | ATATTGATATGTGTGGTTAT+TGG | + | chr5.2:23557528-23557547 | MS.gene027687:intron | 25.0% |
| ! | ATTAGTCCCTAAACTATTAA+GGG | + | chr5.2:23559882-23559901 | MS.gene027687:intron | 25.0% |
| ! | ATTGAGAAATCATTATTCCT+GGG | + | chr5.2:23557857-23557876 | MS.gene027687:intron | 25.0% |
| ! | ATTTGGTCTGTAATAAATTC+TGG | + | chr5.2:23560270-23560289 | MS.gene027687:intron | 25.0% |
| ! | CCTTATTCTATAACATATCA+CGG | - | chr5.2:23557236-23557255 | None:intergenic | 25.0% |
| ! | CGTGATATGTTATAGAATAA+GGG | + | chr5.2:23557234-23557253 | MS.gene027687:intron | 25.0% |
| ! | CTTCATAGTACAAAATACTT+CGG | - | chr5.2:23556531-23556550 | None:intergenic | 25.0% |
| ! | GAATAATTTAATGGGAATGT+TGG | - | chr5.2:23557922-23557941 | None:intergenic | 25.0% |
| ! | GATAAGTTACAAGAAAAATG+AGG | + | chr5.2:23556913-23556932 | MS.gene027687:CDS | 25.0% |
| ! | GGAAAGAATGATATTTATCA+AGG | + | chr5.2:23560699-23560718 | MS.gene027687:intron | 25.0% |
| ! | GTGAATTATAAGTTTGACAT+AGG | + | chr5.2:23560545-23560564 | MS.gene027687:intron | 25.0% |
| ! | TAATAGTTTAGGGACTAATT+TGG | - | chr5.2:23559881-23559900 | None:intergenic | 25.0% |
| ! | TAGAATAGAATCGAATCAAT+TGG | + | chr5.2:23559767-23559786 | MS.gene027687:intron | 25.0% |
| ! | TATCAAAATGGATGTTATTG+AGG | - | chr5.2:23559239-23559258 | None:intergenic | 25.0% |
| ! | TCAATTCTCAATTGAAACAA+AGG | - | chr5.2:23556367-23556386 | None:intergenic | 25.0% |
| ! | TCTATTAAAGGGAAAACTAT+TGG | + | chr5.2:23557380-23557399 | MS.gene027687:intron | 25.0% |
| ! | TGATTGTGATTAATCAGATT+GGG | + | chr5.2:23559267-23559286 | MS.gene027687:intron | 25.0% |
| ! | TTACATATGAGATTATCGAT+TGG | + | chr5.2:23560410-23560429 | MS.gene027687:intron | 25.0% |
| ! | TTCATAGTACAAAATACTTC+GGG | - | chr5.2:23556530-23556549 | None:intergenic | 25.0% |
| ! | TTGAAATTATGGTAAAAGCT+AGG | + | chr5.2:23558862-23558881 | MS.gene027687:CDS | 25.0% |
| ! | TTGATTGTGATTAATCAGAT+TGG | + | chr5.2:23559266-23559285 | MS.gene027687:intron | 25.0% |
| ! | TTTATCAAGGACAAAATTGA+CGG | + | chr5.2:23560712-23560731 | MS.gene027687:intron | 25.0% |
| ! | TTTCGGTTTCTTATGATATT+TGG | + | chr5.2:23560253-23560272 | MS.gene027687:intron | 25.0% |
| !! | AAATAACTTCCAATTTTCCT+AGG | + | chr5.2:23558006-23558025 | MS.gene027687:intron | 25.0% |
| !! | AAATGATAGAGTGTTATTAG+AGG | + | chr5.2:23558382-23558401 | MS.gene027687:CDS | 25.0% |
| !! | TGATGTATTTTCATGCTTTA+GGG | + | chr5.2:23560504-23560523 | MS.gene027687:intron | 25.0% |
| !! | TTGATGTATTTTCATGCTTT+AGG | + | chr5.2:23560503-23560522 | MS.gene027687:intron | 25.0% |
| !!! | ACAATCTGTTTTTGACTTTT+TGG | + | chr5.2:23557472-23557491 | MS.gene027687:intron | 25.0% |
| !!! | CAATTTTCGCATTTTTTGTT+AGG | + | chr5.2:23556169-23556188 | MS.gene027687:intron | 25.0% |
| !!! | GTTTTTTTAAAAAAATGCCC+AGG | + | chr5.2:23558052-23558071 | MS.gene027687:intron | 25.0% |
| !!! | TAATAAGTTTCTGTTTTGAG+AGG | + | chr5.2:23558708-23558727 | MS.gene027687:intron | 25.0% |
| !!! | TGATTATTTCAATGGATTGA+TGG | + | chr5.2:23559647-23559666 | MS.gene027687:intron | 25.0% |
| !!! | TTACATTTTTGGGAATACAT+GGG | + | chr5.2:23557799-23557818 | MS.gene027687:intron | 25.0% |
| !!! | TTATTTTGAAGAATTGGAAG+AGG | + | chr5.2:23556450-23556469 | MS.gene027687:CDS | 25.0% |
| !!! | TTTACATTTTTGGGAATACA+TGG | + | chr5.2:23557798-23557817 | MS.gene027687:intron | 25.0% |
| !!! | TTTGATTGATTTGATAGAGA+TGG | + | chr5.2:23560833-23560852 | MS.gene027687:intron | 25.0% |
| !!! | TTTTTGTATTCAGGTTTTCT+TGG | + | chr5.2:23557017-23557036 | MS.gene027687:intron | 25.0% |
| AAAAGACCAAGACAATTACA+CGG | - | chr5.2:23560865-23560884 | None:intergenic | 30.0% | |
| AAAATGCTTTCTCTTTCTGT+GGG | - | chr5.2:23558754-23558773 | None:intergenic | 30.0% | |
| AAACTAACCAAAGGACTAAA+GGG | - | chr5.2:23560131-23560150 | None:intergenic | 30.0% | |
| AAAGAGTCGGATTGAAATTA+TGG | + | chr5.2:23558851-23558870 | MS.gene027687:CDS | 30.0% | |
| AAAGTCAAAAACAGATTGTG+AGG | - | chr5.2:23557471-23557490 | None:intergenic | 30.0% | |
| AAATACTCCATCATGAATGT+TGG | - | chr5.2:23558294-23558313 | None:intergenic | 30.0% | |
| AACCTGTTTATCAATGAGTT+TGG | - | chr5.2:23556075-23556094 | None:intergenic | 30.0% | |
| AATATTCTTGTCAACAGCAA+TGG | + | chr5.2:23557057-23557076 | MS.gene027687:CDS | 30.0% | |
| AGACAAACCCTTAATAGTTT+AGG | - | chr5.2:23559892-23559911 | None:intergenic | 30.0% | |
| AGAGTAGTGACTCTATTAAA+GGG | + | chr5.2:23557369-23557388 | MS.gene027687:intron | 30.0% | |
| AGGGAAGAAACAAAAATTGA+AGG | - | chr5.2:23560174-23560193 | None:intergenic | 30.0% | |
| ATACCCAGGAATATAAAGAA+GGG | - | chr5.2:23558087-23558106 | None:intergenic | 30.0% | |
| ATCTAATGTTGAACTCTAAG+TGG | - | chr5.2:23558503-23558522 | None:intergenic | 30.0% | |
| ATTAAACCAATCCATAAGCA+TGG | - | chr5.2:23557737-23557756 | None:intergenic | 30.0% | |
| ATTATTCCCAAGTTAAAGGA+TGG | + | chr5.2:23557935-23557954 | MS.gene027687:intron | 30.0% | |
| ATTCCAGAAACAGTGAAATA+CGG | - | chr5.2:23559413-23559432 | None:intergenic | 30.0% | |
| ATTGTTATGTATCTAACCCA+TGG | - | chr5.2:23560935-23560954 | None:intergenic | 30.0% | |
| CAACGATTATGTGATGATTT+CGG | + | chr5.2:23560236-23560255 | MS.gene027687:intron | 30.0% | |
| CACTATACACAATATGCAAA+TGG | - | chr5.2:23559600-23559619 | None:intergenic | 30.0% | |
| CCGTGATATGTTATAGAATA+AGG | + | chr5.2:23557233-23557252 | MS.gene027687:intron | 30.0% | |
| CCTCTGTCTGATAAAAAATT+GGG | + | chr5.2:23559525-23559544 | MS.gene027687:intron | 30.0% | |
| CTATCTGCAAAATATTTACC+GGG | - | chr5.2:23558215-23558234 | None:intergenic | 30.0% | |
| CTATTAACCAACATTCATGA+TGG | + | chr5.2:23558284-23558303 | MS.gene027687:intron | 30.0% | |
| CTCAATCTTGTAACAAACAT+GGG | - | chr5.2:23557843-23557862 | None:intergenic | 30.0% | |
| CTCCTATGTTCCTAATTAAT+GGG | + | chr5.2:23557416-23557435 | MS.gene027687:intron | 30.0% | |
| CTTGATGAAATTATGGACTT+TGG | + | chr5.2:23556767-23556786 | MS.gene027687:CDS | 30.0% | |
| GACAAACCCTTAATAGTTTA+GGG | - | chr5.2:23559891-23559910 | None:intergenic | 30.0% | |
| GATTGAGAAATCATTATTCC+TGG | + | chr5.2:23557856-23557875 | MS.gene027687:intron | 30.0% | |
| GCTATCTGCAAAATATTTAC+CGG | - | chr5.2:23558216-23558235 | None:intergenic | 30.0% | |
| GTTTATGAGTTGTAATTTGG+TGG | + | chr5.2:23556967-23556986 | MS.gene027687:intron | 30.0% | |
| TAAACTAACCAAAGGACTAA+AGG | - | chr5.2:23560132-23560151 | None:intergenic | 30.0% | |
| TAAGACTGATGCTTATAGAA+TGG | + | chr5.2:23556832-23556851 | MS.gene027687:CDS | 30.0% | |
| TAATTAGATCTGACGTTGTT+GGG | + | chr5.2:23557085-23557104 | MS.gene027687:CDS | 30.0% | |
| TAGAGTAGTGACTCTATTAA+AGG | + | chr5.2:23557368-23557387 | MS.gene027687:intron | 30.0% | |
| TAGTTCATGAGCCAAATTAA+TGG | - | chr5.2:23559847-23559866 | None:intergenic | 30.0% | |
| TCTAATGTTGAACTCTAAGT+GGG | - | chr5.2:23558502-23558521 | None:intergenic | 30.0% | |
| TCTCAATCTTGTAACAAACA+TGG | - | chr5.2:23557844-23557863 | None:intergenic | 30.0% | |
| TCTCCTATGTTCCTAATTAA+TGG | + | chr5.2:23557415-23557434 | MS.gene027687:intron | 30.0% | |
| TGAAATTAGCAATTTGGACT+TGG | + | chr5.2:23557681-23557700 | MS.gene027687:intron | 30.0% | |
| TGAAGATTATTGAGAAGAGT+GGG | + | chr5.2:23560897-23560916 | MS.gene027687:CDS | 30.0% | |
| TGAGCTACTTGATGAAATTA+TGG | + | chr5.2:23556760-23556779 | MS.gene027687:CDS | 30.0% | |
| TGGTGAAACAAGGATATTTA+GGG | - | chr5.2:23559029-23559048 | None:intergenic | 30.0% | |
| TTAATTAGATCTGACGTTGT+TGG | + | chr5.2:23557084-23557103 | MS.gene027687:CDS | 30.0% | |
| TTATTCCCAAGTTAAAGGAT+GGG | + | chr5.2:23557936-23557955 | MS.gene027687:intron | 30.0% | |
| TTGAAATTGGATCTGAGAAA+TGG | - | chr5.2:23556108-23556127 | None:intergenic | 30.0% | |
| TTGAAGATTATTGAGAAGAG+TGG | + | chr5.2:23560896-23560915 | MS.gene027687:CDS | 30.0% | |
| TTGAATCATCCTAGGAAAAT+TGG | - | chr5.2:23558018-23558037 | None:intergenic | 30.0% | |
| TTGGTGAAACAAGGATATTT+AGG | - | chr5.2:23559030-23559049 | None:intergenic | 30.0% | |
| TTGTATCTAGCTGAAATTTG+AGG | + | chr5.2:23557650-23557669 | MS.gene027687:intron | 30.0% | |
| TTTAAACCAAGTTTACACTC+AGG | - | chr5.2:23558365-23558384 | None:intergenic | 30.0% | |
| TTTAATCAGCTAGTACACTT+GGG | + | chr5.2:23557751-23557770 | MS.gene027687:intron | 30.0% | |
| ! | AGAGACTAAATAGATGGATT+GGG | + | chr5.2:23560624-23560643 | MS.gene027687:intron | 30.0% |
| ! | GATTGCAACATACAGTTTTA+TGG | + | chr5.2:23557207-23557226 | MS.gene027687:intron | 30.0% |
| ! | GTTGAGTGTGAATTTGAAAT+TGG | - | chr5.2:23556121-23556140 | None:intergenic | 30.0% |
| ! | TCAGGTTAAGCCTTTAATTT+GGG | + | chr5.2:23558803-23558822 | MS.gene027687:intron | 30.0% |
| ! | TGAAAACTGACATGTGTTTT+TGG | + | chr5.2:23558317-23558336 | MS.gene027687:intron | 30.0% |
| ! | TGAAGATGAGAACATTTTTG+AGG | + | chr5.2:23557112-23557131 | MS.gene027687:CDS | 30.0% |
| ! | TTATGTCTGGCATTTTATGA+AGG | + | chr5.2:23558569-23558588 | MS.gene027687:intron | 30.0% |
| ! | TTCAGGTTAAGCCTTTAATT+TGG | + | chr5.2:23558802-23558821 | MS.gene027687:intron | 30.0% |
| !! | ATAGAAAGCACCCATTAATT+AGG | - | chr5.2:23557429-23557448 | None:intergenic | 30.0% |
| !! | ATGGGTTAGATACATAACAA+TGG | + | chr5.2:23560934-23560953 | MS.gene027687:CDS | 30.0% |
| !! | GCTAGTTCTAAAATTATGTC+TGG | + | chr5.2:23558556-23558575 | MS.gene027687:intron | 30.0% |
| !! | TGAAGGTTTTATAGAGTACA+AGG | - | chr5.2:23560157-23560176 | None:intergenic | 30.0% |
| !! | TGTAATTGTCTTGGTCTTTT+AGG | + | chr5.2:23560865-23560884 | MS.gene027687:intron | 30.0% |
| !! | TGTTAGAGAAGTTTGTTAGT+TGG | + | chr5.2:23557277-23557296 | MS.gene027687:intron | 30.0% |
| !!! | AAATTCGTGTTTTTTCTTGC+AGG | + | chr5.2:23556417-23556436 | MS.gene027687:intron | 30.0% |
| !!! | AGGCTATTTTTTTCTGCATT+GGG | + | chr5.2:23559479-23559498 | MS.gene027687:intron | 30.0% |
| !!! | TTTTGAGATCATCTAGCTTT+TGG | + | chr5.2:23557180-23557199 | MS.gene027687:intron | 30.0% |
| !!! | TTTTTTCTTGGCAGAAGATT+GGG | + | chr5.2:23558949-23558968 | MS.gene027687:intron | 30.0% |
| !!! | TTTTTTTCTTGGCAGAAGAT+TGG | + | chr5.2:23558948-23558967 | MS.gene027687:intron | 30.0% |
| AAAAGCTAGGAGTCAGTTTA+AGG | + | chr5.2:23558875-23558894 | MS.gene027687:CDS | 35.0% | |
| AACTCCCTTCTTTATATTCC+TGG | + | chr5.2:23558080-23558099 | MS.gene027687:intron | 35.0% | |
| AAGAACTGGACATCAGAAAA+AGG | + | chr5.2:23559800-23559819 | MS.gene027687:intron | 35.0% | |
| AAGATACGGTACAATCAACA+AGG | - | chr5.2:23558782-23558801 | None:intergenic | 35.0% | |
| AAGGGTAATTAGAGTAGTTC+AGG | + | chr5.2:23557252-23557271 | MS.gene027687:intron | 35.0% | |
| AAGTTAAAGGATGGGAAAGT+GGG | + | chr5.2:23557944-23557963 | MS.gene027687:intron | 35.0% | |
| AATGGGAATGTTGGAAGTTA+TGG | - | chr5.2:23557913-23557932 | None:intergenic | 35.0% | |
| AATTAGATCTGACGTTGTTG+GGG | + | chr5.2:23557086-23557105 | MS.gene027687:CDS | 35.0% | |
| ACAAGGACTAAACTAACCAA+AGG | - | chr5.2:23560140-23560159 | None:intergenic | 35.0% | |
| ACTAACGTTAGTGTTGTGTT+TGG | - | chr5.2:23556568-23556587 | None:intergenic | 35.0% | |
| ACTCCCTTCTTTATATTCCT+GGG | + | chr5.2:23558081-23558100 | MS.gene027687:intron | 35.0% | |
| AGAATCGAATCAATTGGTAG+TGG | + | chr5.2:23559773-23559792 | MS.gene027687:intron | 35.0% | |
| AGGCTTAACCTGAAAAGATA+CGG | - | chr5.2:23558796-23558815 | None:intergenic | 35.0% | |
| AGGGTAATTAGAGTAGTTCA+GGG | + | chr5.2:23557253-23557272 | MS.gene027687:intron | 35.0% | |
| AGGTCGATCATACTGAATAA+TGG | + | chr5.2:23558169-23558188 | MS.gene027687:intron | 35.0% | |
| ATACCGTATTTCACTGTTTC+TGG | + | chr5.2:23559407-23559426 | MS.gene027687:CDS | 35.0% | |
| ATCATTATTCCTGGGTATCA+AGG | + | chr5.2:23557865-23557884 | MS.gene027687:intron | 35.0% | |
| ATCTCAAATTTCACGCGTAT+AGG | - | chr5.2:23559389-23559408 | None:intergenic | 35.0% | |
| ATGGGAATGTTGGAAGTTAT+GGG | - | chr5.2:23557912-23557931 | None:intergenic | 35.0% | |
| CAAAATGCTTTCTCTTTCTG+TGG | - | chr5.2:23558755-23558774 | None:intergenic | 35.0% | |
| CACCAAACTCATTGATAAAC+AGG | + | chr5.2:23556070-23556089 | MS.gene027687:CDS | 35.0% | |
| CACCCATTAATTAGGAACAT+AGG | - | chr5.2:23557421-23557440 | None:intergenic | 35.0% | |
| CATACCCAGGAATATAAAGA+AGG | - | chr5.2:23558088-23558107 | None:intergenic | 35.0% | |
| CATCAATTTGACCATTTGGA+TGG | - | chr5.2:23560603-23560622 | None:intergenic | 35.0% | |
| CATCCAAATGGTCAAATTGA+TGG | + | chr5.2:23560601-23560620 | MS.gene027687:intron | 35.0% | |
| CTCACTTAAAATCTTTGCCT+CGG | - | chr5.2:23556807-23556826 | None:intergenic | 35.0% | |
| CTCCTTTCTTTGATACTTTC+AGG | + | chr5.2:23559292-23559311 | MS.gene027687:intron | 35.0% | |
| GAGAGACTAAATAGATGGAT+TGG | + | chr5.2:23560623-23560642 | MS.gene027687:intron | 35.0% | |
| GCCTCTGTCTGATAAAAAAT+TGG | + | chr5.2:23559524-23559543 | MS.gene027687:intron | 35.0% | |
| GGTTAGATACATAACAATGG+CGG | + | chr5.2:23560937-23560956 | MS.gene027687:CDS | 35.0% | |
| GTTAGATACATAACAATGGC+GGG | + | chr5.2:23560938-23560957 | MS.gene027687:CDS | 35.0% | |
| GTTTAATCAGCTAGTACACT+TGG | + | chr5.2:23557750-23557769 | MS.gene027687:intron | 35.0% | |
| TAATCACCGTGTAATTGTCT+TGG | + | chr5.2:23560856-23560875 | MS.gene027687:intron | 35.0% | |
| TATAAGAACCAGTTTAGGCT+TGG | - | chr5.2:23557590-23557609 | None:intergenic | 35.0% | |
| TCTCCATCAATTTGACCATT+TGG | - | chr5.2:23560607-23560626 | None:intergenic | 35.0% | |
| TGATGAACAATCTCAAGATC+CGG | + | chr5.2:23556193-23556212 | MS.gene027687:CDS | 35.0% | |
| TGATGGAGAGACTAAATAGA+TGG | + | chr5.2:23560618-23560637 | MS.gene027687:intron | 35.0% | |
| TGGGCTCAAAAATTATTCCT+AGG | - | chr5.2:23558116-23558135 | None:intergenic | 35.0% | |
| TTAATCAGCTAGTACACTTG+GGG | + | chr5.2:23557752-23557771 | MS.gene027687:intron | 35.0% | |
| TTGAGATCTACTGCATTTGT+AGG | + | chr5.2:23557152-23557171 | MS.gene027687:intron | 35.0% | |
| TTTCTGATTAGCAGATTCAC+TGG | + | chr5.2:23560305-23560324 | MS.gene027687:intron | 35.0% | |
| TTTGCTTCCACCCAAATTAA+AGG | - | chr5.2:23558816-23558835 | None:intergenic | 35.0% | |
| ! | ACTTTCCCATCCTTTAACTT+GGG | - | chr5.2:23557944-23557963 | None:intergenic | 35.0% |
| ! | AGTTGTAATTTGGTGGTTTG+AGG | + | chr5.2:23556974-23556993 | MS.gene027687:intron | 35.0% |
| ! | ATATCTGTCAATTTTCTGCC+CGG | + | chr5.2:23558194-23558213 | MS.gene027687:intron | 35.0% |
| ! | ATGGGAAGTTATTTCATTCC+TGG | - | chr5.2:23557894-23557913 | None:intergenic | 35.0% |
| ! | ATTTAGGGCAGTCTAAATTC+TGG | - | chr5.2:23559014-23559033 | None:intergenic | 35.0% |
| ! | CAGATCAATGCATCTTTTTC+AGG | - | chr5.2:23559165-23559184 | None:intergenic | 35.0% |
| ! | CATATGAGATTATCGATTGG+AGG | + | chr5.2:23560413-23560432 | MS.gene027687:intron | 35.0% |
| ! | CTGAAAAAGATGCATTGATC+TGG | + | chr5.2:23559163-23559182 | MS.gene027687:CDS | 35.0% |
| ! | TCCTTGTTTCACCAACTAAT+AGG | + | chr5.2:23559035-23559054 | MS.gene027687:intron | 35.0% |
| ! | TGATTGTACCGTATCTTTTC+AGG | + | chr5.2:23558785-23558804 | MS.gene027687:intron | 35.0% |
| ! | TGGGAAGTTATTTCATTCCT+GGG | - | chr5.2:23557893-23557912 | None:intergenic | 35.0% |
| ! | TTTAGGGCAGTCTAAATTCT+GGG | - | chr5.2:23559013-23559032 | None:intergenic | 35.0% |
| ! | TTTGGCTTATTCTAATGCAG+TGG | + | chr5.2:23558335-23558354 | MS.gene027687:intron | 35.0% |
| ! | TTTTTCTTGGCAGAAGATTG+GGG | + | chr5.2:23558950-23558969 | MS.gene027687:intron | 35.0% |
| !! | ATTTTTGGGAATACATGGGT+AGG | + | chr5.2:23557803-23557822 | MS.gene027687:intron | 35.0% |
| !! | CTCCTGAAAGTATCAAAGAA+AGG | - | chr5.2:23559297-23559316 | None:intergenic | 35.0% |
| !! | GAGACTAAATAGATGGATTG+GGG | + | chr5.2:23560625-23560644 | MS.gene027687:intron | 35.0% |
| !! | TAAATAGATGGATTGGGGAA+TGG | + | chr5.2:23560630-23560649 | MS.gene027687:intron | 35.0% |
| !! | TAGGGATAACTTTGTTGTTG+TGG | + | chr5.2:23556480-23556499 | MS.gene027687:CDS | 35.0% |
| !! | TATTCAGGTTTTCTTGGATG+TGG | + | chr5.2:23557023-23557042 | MS.gene027687:intron | 35.0% |
| !! | TCCTATTAGTTGGTGAAACA+AGG | - | chr5.2:23559039-23559058 | None:intergenic | 35.0% |
| !! | TTGAAAAGCACTCAAAGAGT+CGG | + | chr5.2:23558838-23558857 | MS.gene027687:CDS | 35.0% |
| !! | TTGGTAGTGGAAAAAAGAAC+TGG | + | chr5.2:23559786-23559805 | MS.gene027687:intron | 35.0% |
| !! | TTTCACTGTTTCTGGAATAC+AGG | + | chr5.2:23559415-23559434 | MS.gene027687:CDS | 35.0% |
| !! | TTTTTGGGAATACATGGGTA+GGG | + | chr5.2:23557804-23557823 | MS.gene027687:intron | 35.0% |
| !!! | AAAGAAGGGAGTTTTATTCC+TGG | - | chr5.2:23558073-23558092 | None:intergenic | 35.0% |
| !!! | AAGAAGGGAGTTTTATTCCT+GGG | - | chr5.2:23558072-23558091 | None:intergenic | 35.0% |
| !!! | CCCAATTTTTTATCAGACAG+AGG | - | chr5.2:23559528-23559547 | None:intergenic | 35.0% |
| !!! | GAGGCTATTTTTTTCTGCAT+TGG | + | chr5.2:23559478-23559497 | MS.gene027687:intron | 35.0% |
| !!! | TAAGTTTCTGTTTTGAGAGG+TGG | + | chr5.2:23558711-23558730 | MS.gene027687:intron | 35.0% |
| AAAATTAGATCCTTCCCTGG+AGG | + | chr5.2:23559186-23559205 | MS.gene027687:CDS | 40.0% | |
| AAAGGACTAAAGGGATAGAC+GGG | - | chr5.2:23560122-23560141 | None:intergenic | 40.0% | |
| AATTGGAAGAGGAATCGCTT+AGG | + | chr5.2:23556461-23556480 | MS.gene027687:CDS | 40.0% | |
| ACACCGTTATCGTAAACAAC+CGG | - | chr5.2:23556215-23556234 | None:intergenic | 40.0% | |
| ACCTCACTGCGTGAATTAAA+AGG | - | chr5.2:23558984-23559003 | None:intergenic | 40.0% | |
| AGTTACTCAAAGACCTCCTA+TGG | + | chr5.2:23556856-23556875 | MS.gene027687:CDS | 40.0% | |
| AGTTTGACATAGGAGACAGT+TGG | + | chr5.2:23560555-23560574 | MS.gene027687:intron | 40.0% | |
| ATACTTGTCTTGTCGATGTC+TGG | + | chr5.2:23556623-23556642 | MS.gene027687:intron | 40.0% | |
| ATCAAATCGAACGATCCATC+AGG | - | chr5.2:23558646-23558665 | None:intergenic | 40.0% | |
| ATCTTTGCCTCGGTATATTG+AGG | - | chr5.2:23556797-23556816 | None:intergenic | 40.0% | |
| ATGAAATAAATGCCCGCATG+AGG | + | chr5.2:23558135-23558154 | MS.gene027687:intron | 40.0% | |
| ATTGGAAGAGGAATCGCTTA+GGG | + | chr5.2:23556462-23556481 | MS.gene027687:CDS | 40.0% | |
| ATTTCTTTCATCCCTCCTGA+TGG | + | chr5.2:23558628-23558647 | MS.gene027687:CDS | 40.0% | |
| CAAAGGACTAAAGGGATAGA+CGG | - | chr5.2:23560123-23560142 | None:intergenic | 40.0% | |
| CAAGTTAAAGGATGGGAAAG+TGG | + | chr5.2:23557943-23557962 | MS.gene027687:intron | 40.0% | |
| CACTTTCCCATCCTTTAACT+TGG | - | chr5.2:23557945-23557964 | None:intergenic | 40.0% | |
| CATGCGGGCATTTATTTCAT+GGG | - | chr5.2:23558135-23558154 | None:intergenic | 40.0% | |
| CCTAATGTTCGAACGTCAAT+GGG | + | chr5.2:23559123-23559142 | MS.gene027687:CDS | 40.0% | |
| GATCCGGTTGTTTACGATAA+CGG | + | chr5.2:23556209-23556228 | MS.gene027687:CDS | 40.0% | |
| GATTCTCCATGCTTATGGAT+TGG | + | chr5.2:23557728-23557747 | MS.gene027687:intron | 40.0% | |
| GCTTCCTCATCTGTTATACT+GGG | - | chr5.2:23559347-23559366 | None:intergenic | 40.0% | |
| GTTTGACATAGGAGACAGTT+GGG | + | chr5.2:23560556-23560575 | MS.gene027687:intron | 40.0% | |
| TAATCAGCTAGTACACTTGG+GGG | + | chr5.2:23557753-23557772 | MS.gene027687:intron | 40.0% | |
| TACTTGTCTTGTCGATGTCT+GGG | + | chr5.2:23556624-23556643 | MS.gene027687:intron | 40.0% | |
| TATTGAGAAGAGTGGGTATC+AGG | + | chr5.2:23560904-23560923 | MS.gene027687:CDS | 40.0% | |
| TCAGCTGTGAATGTATACAG+TGG | - | chr5.2:23558244-23558263 | None:intergenic | 40.0% | |
| TCATGCGGGCATTTATTTCA+TGG | - | chr5.2:23558136-23558155 | None:intergenic | 40.0% | |
| TCCTAATGTTCGAACGTCAA+TGG | + | chr5.2:23559122-23559141 | MS.gene027687:CDS | 40.0% | |
| TGACGTTCGAACATTAGGAT+TGG | - | chr5.2:23559121-23559140 | None:intergenic | 40.0% | |
| TGCTTCCTCATCTGTTATAC+TGG | - | chr5.2:23559348-23559367 | None:intergenic | 40.0% | |
| TGGAAAATTAGATCCTTCCC+TGG | + | chr5.2:23559183-23559202 | MS.gene027687:CDS | 40.0% | |
| TGGACATCAGAAAAAGGATC+TGG | + | chr5.2:23559806-23559825 | MS.gene027687:intron | 40.0% | |
| TGGTTATCCTCAATATACCG+AGG | + | chr5.2:23556787-23556806 | MS.gene027687:CDS | 40.0% | |
| TTGGATCTGAGAAATGGAAG+TGG | - | chr5.2:23556102-23556121 | None:intergenic | 40.0% | |
| ! | AAGCTTTCGATTGGAAGTGT+TGG | + | chr5.2:23556656-23556675 | MS.gene027687:intron | 40.0% |
| ! | AGAGTGTTATTAGAGGCACA+AGG | + | chr5.2:23558389-23558408 | MS.gene027687:CDS | 40.0% |
| ! | CATTTTCAAATCGAGCCAAC+CGG | - | chr5.2:23558600-23558619 | None:intergenic | 40.0% |
| ! | CGTATAGGAGCTTTTCTTTC+AGG | - | chr5.2:23559374-23559393 | None:intergenic | 40.0% |
| ! | CGTTCGATTTGATGACATAC+AGG | + | chr5.2:23558653-23558672 | MS.gene027687:CDS | 40.0% |
| ! | GAGTTTGGTGAAGAAACGTT+CGG | - | chr5.2:23556060-23556079 | None:intergenic | 40.0% |
| ! | GGAGGGTATATTGATATGTG+TGG | + | chr5.2:23557521-23557540 | MS.gene027687:intron | 40.0% |
| ! | TTGGTGTTTCTACTCGTATG+TGG | + | chr5.2:23557491-23557510 | MS.gene027687:intron | 40.0% |
| ! | TTTTCTTGGCAGAAGATTGG+GGG | + | chr5.2:23558951-23558970 | MS.gene027687:intron | 40.0% |
| !! | GCATTTTATGAAGGTGTGTC+CGG | + | chr5.2:23558578-23558597 | MS.gene027687:intron | 40.0% |
| !! | GGTTAAGCCTTTAATTTGGG+TGG | + | chr5.2:23558806-23558825 | MS.gene027687:intron | 40.0% |
| !! | GTACTGATTCTCCATGCTTA+TGG | + | chr5.2:23557723-23557742 | MS.gene027687:intron | 40.0% |
| !! | TCCTTTTAATTCACGCAGTG+AGG | + | chr5.2:23558980-23558999 | MS.gene027687:intron | 40.0% |
| !! | TTAGGATTGGTTGCATCAAC+AGG | - | chr5.2:23559108-23559127 | None:intergenic | 40.0% |
| !! | TTATCAGACAGAGGCATTGA+AGG | - | chr5.2:23559519-23559538 | None:intergenic | 40.0% |
| AAATCGAACGATCCATCAGG+AGG | - | chr5.2:23558643-23558662 | None:intergenic | 45.0% | |
| AATAGGTCGAGTTTCAGCCA+TGG | - | chr5.2:23560368-23560387 | None:intergenic | 45.0% | |
| AATCAGCTAGTACACTTGGG+GGG | + | chr5.2:23557754-23557773 | MS.gene027687:intron | 45.0% | |
| AATCGAACGATCCATCAGGA+GGG | - | chr5.2:23558642-23558661 | None:intergenic | 45.0% | |
| ACAGCATTAGTCACTGCCAT+AGG | - | chr5.2:23556875-23556894 | None:intergenic | 45.0% | |
| ACCAGGAGAAAGAGAAAGTG+AGG | - | chr5.2:23560194-23560213 | None:intergenic | 45.0% | |
| ACTTGTCTTGTCGATGTCTG+GGG | + | chr5.2:23556625-23556644 | MS.gene027687:intron | 45.0% | |
| ATTGAATGATCCCCCAACCA+TGG | + | chr5.2:23560348-23560367 | MS.gene027687:intron | 45.0% | |
| CAACTCAATCTCGACATTCG+TGG | - | chr5.2:23559079-23559098 | None:intergenic | 45.0% | |
| CAAGGGAAAAGCGATAGACT+TGG | + | chr5.2:23558421-23558440 | MS.gene027687:CDS | 45.0% | |
| CAGTGACTAATGCTGTGTCT+TGG | + | chr5.2:23556879-23556898 | MS.gene027687:CDS | 45.0% | |
| CCAGGAGAAAGAGAAAGTGA+GGG | - | chr5.2:23560193-23560212 | None:intergenic | 45.0% | |
| CCCATTGACGTTCGAACATT+AGG | - | chr5.2:23559126-23559145 | None:intergenic | 45.0% | |
| CCTCATCTGTTATACTGGGA+AGG | - | chr5.2:23559343-23559362 | None:intergenic | 45.0% | |
| CCTTCCCAGTATAACAGATG+AGG | + | chr5.2:23559340-23559359 | MS.gene027687:CDS | 45.0% | |
| CGTCTATCCCTTTAGTCCTT+TGG | + | chr5.2:23560121-23560140 | MS.gene027687:intron | 45.0% | |
| CTACTCGTATGTGGATACTC+TGG | + | chr5.2:23557500-23557519 | MS.gene027687:intron | 45.0% | |
| CTCCTAAAGAACACCTCATG+CGG | - | chr5.2:23558151-23558170 | None:intergenic | 45.0% | |
| GATATGTGTGGTTATTGGCG+AGG | + | chr5.2:23557533-23557552 | MS.gene027687:intron | 45.0% | |
| GCAATGGACAAGCTTTCGAT+TGG | + | chr5.2:23556647-23556666 | MS.gene027687:intron | 45.0% | |
| GCACACTCTTGAATCATCCT+AGG | - | chr5.2:23558026-23558045 | None:intergenic | 45.0% | |
| GGAGTCAGTTTAAGGAACGT+AGG | + | chr5.2:23558883-23558902 | MS.gene027687:CDS | 45.0% | |
| GGATAGACGGGAAATAGCTT+AGG | - | chr5.2:23560110-23560129 | None:intergenic | 45.0% | |
| GGTATGCCTGAGTGTAAACT+TGG | + | chr5.2:23558356-23558375 | MS.gene027687:CDS | 45.0% | |
| TCCTAAAGAACACCTCATGC+GGG | - | chr5.2:23558150-23558169 | None:intergenic | 45.0% | |
| TCGTATGTGGATACTCTGGA+GGG | + | chr5.2:23557504-23557523 | MS.gene027687:intron | 45.0% | |
| TTAGGGAACCAAGCCTAAAC+TGG | + | chr5.2:23557579-23557598 | MS.gene027687:intron | 45.0% | |
| TTCCTAGGAACAACATACCC+AGG | - | chr5.2:23558101-23558120 | None:intergenic | 45.0% | |
| TTCCTGGGTATGTTGTTCCT+AGG | + | chr5.2:23558096-23558115 | MS.gene027687:intron | 45.0% | |
| TTGGTTGCATCAACAGGAAC+AGG | - | chr5.2:23559102-23559121 | None:intergenic | 45.0% | |
| ! | TCAGGTTTTCTTGGATGTGG+TGG | + | chr5.2:23557026-23557045 | MS.gene027687:intron | 45.0% |
| ! | TTTATGAAGGTGTGTCCGGT+TGG | + | chr5.2:23558582-23558601 | MS.gene027687:intron | 45.0% |
| !! | ATGGATTGGGGAATGGTTTG+AGG | + | chr5.2:23560637-23560656 | MS.gene027687:intron | 45.0% |
| !! | CAAGTCTATCGCTTTTCCCT+TGG | - | chr5.2:23558423-23558442 | None:intergenic | 45.0% |
| !! | TCGCTTTTCCCTTGGTTGTT+CGG | - | chr5.2:23558415-23558434 | None:intergenic | 45.0% |
| ATCAGCTAGTACACTTGGGG+GGG | + | chr5.2:23557755-23557774 | MS.gene027687:intron | 50.0% | |
| CAAATGGTGAGAGAGACAGC+AGG | - | chr5.2:23559584-23559603 | None:intergenic | 50.0% | |
| CCCTCACTTTCTCTTTCTCC+TGG | + | chr5.2:23560190-23560209 | MS.gene027687:intron | 50.0% | |
| CTCGTATGTGGATACTCTGG+AGG | + | chr5.2:23557503-23557522 | MS.gene027687:intron | 50.0% | |
| CTGTGTCTTGGCGAAGTGAA+GGG | + | chr5.2:23556891-23556910 | MS.gene027687:CDS | 50.0% | |
| CTGTTCCTCCTCGACATCAA+AGG | + | chr5.2:23555984-23556003 | MS.gene027687:CDS | 50.0% | |
| GAAGAAACGTTCGGCTTCGA+TGG | - | chr5.2:23556051-23556070 | None:intergenic | 50.0% | |
| GACATACAGGCTCAGTACAC+AGG | + | chr5.2:23558666-23558685 | MS.gene027687:CDS | 50.0% | |
| GCATTAGTCACTGCCATAGG+AGG | - | chr5.2:23556872-23556891 | None:intergenic | 50.0% | |
| GGCAGTTAACGCCATCCAAA+TGG | + | chr5.2:23560589-23560608 | MS.gene027687:intron | 50.0% | |
| GTCGAGTTTCAGCCATGGTT+GGG | - | chr5.2:23560363-23560382 | None:intergenic | 50.0% | |
| TCGAAGATACCTTGCCTCCA+GGG | - | chr5.2:23559203-23559222 | None:intergenic | 50.0% | |
| TCGAGTTTCAGCCATGGTTG+GGG | - | chr5.2:23560362-23560381 | None:intergenic | 50.0% | |
| TGGGTATCAGGCTCTTCCAT+GGG | + | chr5.2:23560916-23560935 | MS.gene027687:CDS | 50.0% | |
| TTCGAAGATACCTTGCCTCC+AGG | - | chr5.2:23559204-23559223 | None:intergenic | 50.0% | |
| ! | CGCATGAGGTGTTCTTTAGG+AGG | + | chr5.2:23558149-23558168 | MS.gene027687:intron | 50.0% |
| ! | GAGGCAAGGTATCTTCGAAG+TGG | + | chr5.2:23559205-23559224 | MS.gene027687:intron | 50.0% |
| !! | CAGACAGAGGCATTGAAGGA+AGG | - | chr5.2:23559515-23559534 | None:intergenic | 50.0% |
| AGATACCTTGCCTCCAGGGA+AGG | - | chr5.2:23559199-23559218 | None:intergenic | 55.0% | |
| CGAGTTTCAGCCATGGTTGG+GGG | - | chr5.2:23560361-23560380 | None:intergenic | 55.0% | |
| GAAACGTTCGGCTTCGATGG+CGG | - | chr5.2:23556048-23556067 | None:intergenic | 55.0% | |
| GATGGCGTTAACTGCCACGT+TGG | - | chr5.2:23560585-23560604 | None:intergenic | 55.0% | |
| GCACAAGGCCGAACAACCAA+GGG | + | chr5.2:23558404-23558423 | MS.gene027687:CDS | 55.0% | |
| GCTGTGTCTTGGCGAAGTGA+AGG | + | chr5.2:23556890-23556909 | MS.gene027687:CDS | 55.0% | |
| GGTCGAGTTTCAGCCATGGT+TGG | - | chr5.2:23560364-23560383 | None:intergenic | 55.0% | |
| GTGGGTATCAGGCTCTTCCA+TGG | + | chr5.2:23560915-23560934 | MS.gene027687:CDS | 55.0% | |
| GTGTGGTTATTGGCGAGGAC+TGG | + | chr5.2:23557538-23557557 | MS.gene027687:intron | 55.0% | |
| TAGATCCTTCCCTGGAGGCA+AGG | + | chr5.2:23559191-23559210 | MS.gene027687:CDS | 55.0% | |
| TCCTGGGAACCTTGATACCC+AGG | - | chr5.2:23557877-23557896 | None:intergenic | 55.0% | |
| TCCTGGGTATCAAGGTTCCC+AGG | + | chr5.2:23557873-23557892 | MS.gene027687:intron | 55.0% | |
| TGGTGAGAGAGACAGCAGGA+AGG | - | chr5.2:23559580-23559599 | None:intergenic | 55.0% | |
| ! | AGACAGTTGGGTTGCCAACG+TGG | + | chr5.2:23560568-23560587 | MS.gene027687:intron | 55.0% |
| ! | CTTGTCGATGTCTGGGGCAA+TGG | + | chr5.2:23556631-23556650 | MS.gene027687:intron | 55.0% |
| ! | GCCCGCATGAGGTGTTCTTT+AGG | + | chr5.2:23558146-23558165 | MS.gene027687:intron | 55.0% |
| ! | TGGCGGGAGAGTATGAGCTA+AGG | + | chr5.2:23560954-23560973 | MS.gene027687:CDS | 55.0% |
| AGTCACGCCAGACGAGGATG+CGG | - | chr5.2:23556010-23556029 | None:intergenic | 60.0% | |
| GGATGCGGCCTTTGATGTCG+AGG | - | chr5.2:23555995-23556014 | None:intergenic | 60.0% | |
| GGCACAAGGCCGAACAACCA+AGG | + | chr5.2:23558403-23558422 | MS.gene027687:CDS | 60.0% | |
| TCAAAGGCCGCATCCTCGTC+TGG | + | chr5.2:23556000-23556019 | MS.gene027687:CDS | 60.0% | |
| TGCGGCCTTTGATGTCGAGG+AGG | - | chr5.2:23555992-23556011 | None:intergenic | 60.0% | |
| CTCGTCTGGCGTGACTACCG+CGG | + | chr5.2:23556014-23556033 | MS.gene027687:CDS | 65.0% | |
| CGCGGTAGTCACGCCAGACG+AGG | - | chr5.2:23556016-23556035 | None:intergenic | 70.0% | |
| !! | CGATGGCGGAGACGTCGCCG+CGG | - | chr5.2:23556034-23556053 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 23555963 | 23560985 | 23555963 | ID=MS.gene027687 |
| chr5.2 | mRNA | 23555963 | 23560985 | 23555963 | ID=MS.gene027687.t1;Parent=MS.gene027687 |
| chr5.2 | exon | 23555963 | 23556091 | 23555963 | ID=MS.gene027687.t1.exon1;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23555963 | 23556091 | 23555963 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| chr5.2 | exon | 23556191 | 23556337 | 23556191 | ID=MS.gene027687.t1.exon2;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23556191 | 23556337 | 23556191 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| chr5.2 | exon | 23556439 | 23556501 | 23556439 | ID=MS.gene027687.t1.exon3;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23556439 | 23556501 | 23556439 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| chr5.2 | exon | 23556758 | 23556934 | 23556758 | ID=MS.gene027687.t1.exon4;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23556758 | 23556934 | 23556758 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| chr5.2 | exon | 23557030 | 23557133 | 23557030 | ID=MS.gene027687.t1.exon5;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23557030 | 23557133 | 23557030 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| chr5.2 | exon | 23558355 | 23558462 | 23558355 | ID=MS.gene027687.t1.exon6;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23558355 | 23558462 | 23558355 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| chr5.2 | exon | 23558591 | 23558687 | 23558591 | ID=MS.gene027687.t1.exon7;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23558591 | 23558687 | 23558591 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| chr5.2 | exon | 23558807 | 23558904 | 23558807 | ID=MS.gene027687.t1.exon8;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23558807 | 23558904 | 23558807 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| chr5.2 | exon | 23559071 | 23559212 | 23559071 | ID=MS.gene027687.t1.exon9;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23559071 | 23559212 | 23559071 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| chr5.2 | exon | 23559314 | 23559436 | 23559314 | ID=MS.gene027687.t1.exon10;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23559314 | 23559436 | 23559314 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| chr5.2 | exon | 23560887 | 23560985 | 23560887 | ID=MS.gene027687.t1.exon11;Parent=MS.gene027687.t1 |
| chr5.2 | CDS | 23560887 | 23560985 | 23560887 | ID=cds.MS.gene027687.t1;Parent=MS.gene027687.t1 |
| Gene Sequence |
| Protein sequence |
