Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44324.t1 | XP_003613166.1 | 100 | 428 | 0 | 0 | 1 | 428 | 1 | 428 | 6.20E-221 | 776.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44324.t1 | O22715 | 83.4 | 428 | 71 | 0 | 1 | 428 | 1 | 428 | 1.8e-208 | 726.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44324.t1 | G7K043 | 100.0 | 428 | 0 | 0 | 1 | 428 | 1 | 428 | 4.4e-221 | 776.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053143 | MS.gene44324 | 0.827986 | 1.16E-54 | -1.69E-46 |
| MS.gene054585 | MS.gene44324 | 0.83386 | 4.18E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene021005 | MS.gene44324 | PPI |
| MS.gene44324 | MS.gene010105 | PPI |
| MS.gene44324 | MS.gene050768 | PPI |
| MS.gene050771 | MS.gene44324 | PPI |
| MS.gene017498 | MS.gene44324 | PPI |
| MS.gene23142 | MS.gene44324 | PPI |
| MS.gene44324 | MS.gene052309 | PPI |
| MS.gene44324 | MS.gene054375 | PPI |
| MS.gene015312 | MS.gene44324 | PPI |
| MS.gene072572 | MS.gene44324 | PPI |
| MS.gene003372 | MS.gene44324 | PPI |
| MS.gene09656 | MS.gene44324 | PPI |
| MS.gene44324 | MS.gene21470 | PPI |
| MS.gene050001 | MS.gene44324 | PPI |
| MS.gene031829 | MS.gene44324 | PPI |
| MS.gene75781 | MS.gene44324 | PPI |
| MS.gene059672 | MS.gene44324 | PPI |
| MS.gene44324 | MS.gene28922 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44324.t1 | MTR_5g033500 | 100.000 | 428 | 0 | 0 | 1 | 428 | 1 | 428 | 0.0 | 884 |
| MS.gene44324.t1 | MTR_8g069565 | 93.925 | 428 | 26 | 0 | 1 | 428 | 1 | 428 | 0.0 | 848 |
| MS.gene44324.t1 | MTR_5g033500 | 100.000 | 307 | 0 | 0 | 1 | 307 | 1 | 307 | 0.0 | 634 |
| MS.gene44324.t1 | MTR_5g014330 | 43.409 | 440 | 232 | 6 | 1 | 426 | 1 | 437 | 5.28e-125 | 369 |
| MS.gene44324.t1 | MTR_5g014330 | 41.439 | 403 | 219 | 6 | 1 | 389 | 1 | 400 | 9.68e-105 | 316 |
| MS.gene44324.t1 | MTR_3g112190 | 32.957 | 443 | 273 | 8 | 6 | 427 | 3 | 442 | 1.42e-79 | 253 |
| MS.gene44324.t1 | MTR_5g066050 | 33.040 | 454 | 267 | 10 | 6 | 427 | 3 | 451 | 1.05e-77 | 248 |
| MS.gene44324.t1 | MTR_5g066050 | 33.113 | 453 | 267 | 10 | 6 | 427 | 3 | 450 | 1.26e-77 | 248 |
| MS.gene44324.t1 | MTR_7g111870 | 25.843 | 445 | 267 | 11 | 7 | 426 | 4 | 410 | 1.80e-45 | 162 |
| MS.gene44324.t1 | MTR_7g111870 | 27.246 | 334 | 193 | 6 | 7 | 318 | 4 | 309 | 6.53e-42 | 151 |
| MS.gene44324.t1 | MTR_3g452810 | 78.788 | 66 | 13 | 1 | 49 | 113 | 19 | 84 | 2.27e-26 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44324.t1 | AT1G60780 | 89.720 | 428 | 44 | 0 | 1 | 428 | 1 | 428 | 0.0 | 825 |
| MS.gene44324.t1 | AT1G10730 | 85.280 | 428 | 63 | 0 | 1 | 428 | 1 | 428 | 0.0 | 785 |
| MS.gene44324.t1 | AT5G46630 | 43.409 | 440 | 232 | 5 | 1 | 426 | 1 | 437 | 1.22e-128 | 379 |
| MS.gene44324.t1 | AT5G46630 | 42.067 | 416 | 224 | 5 | 1 | 402 | 1 | 413 | 2.64e-115 | 345 |
| MS.gene44324.t1 | AT4G24550 | 31.429 | 455 | 272 | 8 | 6 | 427 | 4 | 451 | 1.57e-80 | 256 |
| MS.gene44324.t1 | AT4G24550 | 31.953 | 338 | 206 | 4 | 6 | 320 | 4 | 340 | 1.41e-63 | 209 |
| MS.gene44324.t1 | AT4G24550 | 31.953 | 338 | 206 | 4 | 6 | 320 | 4 | 340 | 2.10e-63 | 209 |
| MS.gene44324.t1 | AT1G56590 | 26.818 | 440 | 275 | 11 | 7 | 427 | 4 | 415 | 1.22e-44 | 160 |
Find 91 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCTTCCACCCAAATTAA+AGG | 0.175025 | 5.4:-23572341 | None:intergenic |
| TTCAGGTTAAGCCTTTAATT+TGG | 0.191238 | 5.4:+23572330 | MS.gene44324:intron |
| TATGAGCTAAGGCTTATTTA+AGG | 0.229610 | 5.4:+23574330 | MS.gene44324:CDS |
| TGCTTCCTCATCTGTTATAC+TGG | 0.267401 | 5.4:-23572871 | None:intergenic |
| AAAAGCTAGGAGTCAGTTTA+AGG | 0.275911 | 5.4:+23572403 | MS.gene44324:CDS |
| TGAGCTACTTGATGAAATTA+TGG | 0.307055 | 5.4:+23570286 | MS.gene44324:CDS |
| TCAGGTTAAGCCTTTAATTT+GGG | 0.308649 | 5.4:+23572331 | MS.gene44324:intron |
| GAAGAGTCGGATTGAGATTA+TGG | 0.309215 | 5.4:+23572379 | MS.gene44324:CDS |
| CCCATTGACGTTCGAACATT+AGG | 0.309842 | 5.4:-23572649 | None:intergenic |
| TAATTAGATCTGACGTTGTT+GGG | 0.329471 | 5.4:+23570611 | MS.gene44324:CDS |
| CACCAAACTCATTGATAAAC+AGG | 0.331688 | 5.4:+23569599 | MS.gene44324:CDS |
| TATTGAGAAGAGTGGGTATC+AGG | 0.353475 | 5.4:+23574269 | MS.gene44324:CDS |
| AACCTGTTTATCAATGAGTT+TGG | 0.398256 | 5.4:-23569601 | None:intergenic |
| TTGAAGATTATTGAGAAGAG+TGG | 0.401908 | 5.4:+23574261 | MS.gene44324:CDS |
| TTAGGATTGGTTGCATCAAC+AGG | 0.412796 | 5.4:-23572631 | None:intergenic |
| CTTGATGAAATTATGGACTT+TGG | 0.414029 | 5.4:+23570293 | MS.gene44324:CDS |
| TCAAAGGCCGCATCCTCGTC+TGG | 0.420613 | 5.4:+23569529 | MS.gene44324:CDS |
| TAAGACTGATGCTTATAGAA+TGG | 0.429934 | 5.4:+23570358 | MS.gene44324:CDS |
| AAATGATAGAGTGTTATTAG+AGG | 0.432015 | 5.4:+23571910 | MS.gene44324:CDS |
| ATCTCAAATTTCACGCGTAT+AGG | 0.434573 | 5.4:-23572912 | None:intergenic |
| TCCTAATGTTCGAACGTCAA+TGG | 0.438449 | 5.4:+23572648 | MS.gene44324:CDS |
| AATTGGAAGAGGAATCGCTT+AGG | 0.448944 | 5.4:+23569993 | MS.gene44324:CDS |
| ATCTTTGCCTCTGTATATTG+AGG | 0.457499 | 5.4:-23570320 | None:intergenic |
| TGGAAAATTCGATCCTTCCC+TGG | 0.461482 | 5.4:+23572709 | MS.gene44324:CDS |
| GATCCGGTTGTTTACGATAA+CGG | 0.462375 | 5.4:+23569738 | MS.gene44324:CDS |
| TTGGTTGCATCAACAGGAAC+AGG | 0.463558 | 5.4:-23572625 | None:intergenic |
| CCTAATGTTCGAACGTCAAT+GGG | 0.466244 | 5.4:+23572649 | MS.gene44324:CDS |
| CGTTCGATTTGATGACATAC+AGG | 0.467708 | 5.4:+23572181 | MS.gene44324:CDS |
| TTCGAAGATACCTTGCCTCC+AGG | 0.475747 | 5.4:-23572727 | None:intergenic |
| ACCACCGCATCATCAATGTC+AGG | 0.484386 | 5.4:+23569477 | None:intergenic |
| GAGTTTGGTGAAGAAACGTT+CGG | 0.488898 | 5.4:-23569586 | None:intergenic |
| CAACTCAATCTCGACATTTG+TGG | 0.490408 | 5.4:-23572602 | None:intergenic |
| TAGGGATAACTTTGTTGTTG+TGG | 0.491523 | 5.4:+23570012 | MS.gene44324:CDS |
| ATTGGAAGAGGAATCGCTTA+GGG | 0.493977 | 5.4:+23569994 | MS.gene44324:CDS |
| GGTATGCCCGAGTGTAAACT+TGG | 0.500011 | 5.4:+23571884 | MS.gene44324:CDS |
| AGTTACTCAAAGACCTCCTA+TGG | 0.508336 | 5.4:+23570382 | MS.gene44324:CDS |
| ATTTCTTTCATCCCTCCTGA+TGG | 0.509512 | 5.4:+23572156 | MS.gene44324:CDS |
| ATCAAATCGAACGATCCATC+AGG | 0.513755 | 5.4:-23572171 | None:intergenic |
| GAAGAAACGTTCGGCTTCGA+TGG | 0.521450 | 5.4:-23569577 | None:intergenic |
| ATTCCAGAAACAGTAAAATA+CGG | 0.525326 | 5.4:-23572936 | None:intergenic |
| GTGGGTATCAGGCTCTTCCA+TGG | 0.527442 | 5.4:+23574280 | MS.gene44324:CDS |
| TGACGTTCGAACATTAGGAT+TGG | 0.528631 | 5.4:-23572644 | None:intergenic |
| TTAATTAGATCTGACGTTGT+TGG | 0.530637 | 5.4:+23570610 | MS.gene44324:CDS |
| AATATTCTTGTCAATAGCAA+TGG | 0.531888 | 5.4:+23570583 | MS.gene44324:CDS |
| TGAAGATTATTGAGAAGAGT+GGG | 0.536978 | 5.4:+23574262 | MS.gene44324:CDS |
| CAAGGGAAAAGCGATAGACT+TGG | 0.539799 | 5.4:+23571949 | MS.gene44324:CDS |
| TTTATGAAGGTGTGTCCGGT+TGG | 0.542485 | 5.4:+23572110 | MS.gene44324:intron |
| TGATGAACAATCTCAAGATC+CGG | 0.542836 | 5.4:+23569722 | MS.gene44324:CDS |
| GGTTAAGCCTTTAATTTGGG+TGG | 0.544300 | 5.4:+23572334 | MS.gene44324:intron |
| ACACCGTTATCGTAAACAAC+CGG | 0.544469 | 5.4:-23569741 | None:intergenic |
| CTGTTCCTCCTCGACATCAA+AGG | 0.548111 | 5.4:+23569513 | MS.gene44324:CDS |
| CGCGGTAGTCACGCCAGACG+AGG | 0.552252 | 5.4:-23569542 | None:intergenic |
| AATTAGATCTGACGTTGTTG+GGG | 0.553267 | 5.4:+23570612 | MS.gene44324:CDS |
| ATTTAAACCAAGTTTACACT+CGG | 0.555581 | 5.4:-23571891 | None:intergenic |
| TTGAGATTATGGTAAAAGCT+AGG | 0.558244 | 5.4:+23572390 | MS.gene44324:CDS |
| TCGAAGATACCTTGCCTCCA+GGG | 0.564558 | 5.4:-23572726 | None:intergenic |
| TCGATCCTTCCCTGGAGGCA+AGG | 0.573782 | 5.4:+23572717 | MS.gene44324:CDS |
| GACATACAGGCTCAGTACAC+AGG | 0.577294 | 5.4:+23572194 | MS.gene44324:CDS |
| CCTCATCTGTTATACTGGGA+AGG | 0.577347 | 5.4:-23572866 | None:intergenic |
| AGATACCTTGCCTCCAGGGA+AGG | 0.578555 | 5.4:-23572722 | None:intergenic |
| TGGGTATCAGGCTCTTCCAT+GGG | 0.580053 | 5.4:+23574281 | MS.gene44324:CDS |
| TTGAAAAGCACTCGAAGAGT+CGG | 0.583671 | 5.4:+23572366 | MS.gene44324:CDS |
| GGCACAAGGCAGAACAACCA+AGG | 0.585733 | 5.4:+23571931 | MS.gene44324:CDS |
| AGTCACGCCAGACGAGGATG+CGG | 0.585775 | 5.4:-23569536 | None:intergenic |
| GTGAGATACATAACAATGGC+GGG | 0.586630 | 5.4:+23574303 | MS.gene44324:CDS |
| ATTGTTATGTATCTCACCCA+TGG | 0.588077 | 5.4:-23574297 | None:intergenic |
| GCACAAGGCAGAACAACCAA+GGG | 0.590241 | 5.4:+23571932 | MS.gene44324:CDS |
| CCACCGCATCATCAATGTCA+GGG | 0.593019 | 5.4:+23569478 | None:intergenic |
| ACAGCATTAGTCACTGCCAT+AGG | 0.595173 | 5.4:-23570398 | None:intergenic |
| GCTTCCTCATCTGTTATACT+GGG | 0.596982 | 5.4:-23572870 | None:intergenic |
| GCATTAGTCACTGCCATAGG+AGG | 0.598918 | 5.4:-23570395 | None:intergenic |
| CAGTGACTAATGCTGTGTCT+TGG | 0.615245 | 5.4:+23570405 | MS.gene44324:CDS |
| AAATCGAACGATCCATCAGG+AGG | 0.615509 | 5.4:-23572168 | None:intergenic |
| GCTGTGTCTTGGCGAAGTGA+AGG | 0.616774 | 5.4:+23570416 | MS.gene44324:CDS |
| CTGTGTCTTGGCGAAGTGAA+GGG | 0.618939 | 5.4:+23570417 | MS.gene44324:CDS |
| GAAACGTTCGGCTTCGATGG+CGG | 0.623972 | 5.4:-23569574 | None:intergenic |
| CCTTCCCAGTATAACAGATG+AGG | 0.630177 | 5.4:+23572866 | MS.gene44324:CDS |
| GGATGCGGCCTTTGATGTCG+AGG | 0.631816 | 5.4:-23569521 | None:intergenic |
| TTTAAACCAAGTTTACACTC+GGG | 0.636655 | 5.4:-23571890 | None:intergenic |
| TGGCGGGAGAGTATGAGCTA+AGG | 0.642064 | 5.4:+23574319 | MS.gene44324:CDS |
| CACCGCATCATCAATGTCAG+GGG | 0.662861 | 5.4:+23569479 | None:intergenic |
| TGGTTATCCTCAATATACAG+AGG | 0.671725 | 5.4:+23570313 | MS.gene44324:CDS |
| CTCGTCTGGCGTGACTACCG+CGG | 0.677454 | 5.4:+23569543 | MS.gene44324:CDS |
| GGAGTCAGTTTAAGGAACGT+AGG | 0.677567 | 5.4:+23572411 | MS.gene44324:CDS |
| TGCGGCCTTTGATGTCGAGG+AGG | 0.677780 | 5.4:-23569518 | None:intergenic |
| AATCGAACGATCCATCAGGA+GGG | 0.687261 | 5.4:-23572167 | None:intergenic |
| GGTGAGATACATAACAATGG+CGG | 0.696604 | 5.4:+23574302 | MS.gene44324:CDS |
| ATGGGTGAGATACATAACAA+TGG | 0.702359 | 5.4:+23574299 | MS.gene44324:CDS |
| AAAATTCGATCCTTCCCTGG+AGG | 0.705831 | 5.4:+23572712 | MS.gene44324:CDS |
| AGAGTGTTATTAGAGGCACA+AGG | 0.715426 | 5.4:+23571917 | MS.gene44324:CDS |
| CGATGGCGGAGACGTCGCCG+CGG | 0.726811 | 5.4:-23569560 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGTATATAAAATTTCAT+GGG | - | chr5.4:23571497-23571516 | None:intergenic | 10.0% |
| !! | TTAAAGTATATAAAATTTCA+TGG | - | chr5.4:23571498-23571517 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTAAAAAACTGTT+TGG | - | chr5.4:23571574-23571593 | None:intergenic | 10.0% |
| !!! | TTTTTCTTTATTTTTTTTCT+TGG | + | chr5.4:23572463-23572482 | MS.gene44324:intron | 10.0% |
| !! | ATAAAATAAATCCTATTAGT+TGG | - | chr5.4:23572575-23572594 | None:intergenic | 15.0% |
| !! | TCAAATTATACATAAAATCA+CGG | - | chr5.4:23569674-23569693 | None:intergenic | 15.0% |
| !! | TGAAAATTTATGAATATCAA+TGG | - | chr5.4:23573246-23573265 | None:intergenic | 15.0% |
| !! | TGTATAAATAGAAGAATATA+TGG | + | chr5.4:23570840-23570859 | MS.gene44324:intron | 15.0% |
| !! | TTCTATTAAATCTAATTTCT+GGG | + | chr5.4:23570969-23570988 | MS.gene44324:intron | 15.0% |
| !! | TTTCATAAAAAACAAAAACT+TGG | - | chr5.4:23573838-23573857 | None:intergenic | 15.0% |
| !! | TTTCTATTAAATCTAATTTC+TGG | + | chr5.4:23570968-23570987 | MS.gene44324:intron | 15.0% |
| !!! | AAGTTTAAAATTTACATTTC+TGG | + | chr5.4:23571313-23571332 | MS.gene44324:intron | 15.0% |
| !!! | AATATAAGAAAATCATGTTT+TGG | - | chr5.4:23572974-23572993 | None:intergenic | 15.0% |
| !!! | AGTTTAAAATTTACATTTCT+GGG | + | chr5.4:23571314-23571333 | MS.gene44324:intron | 15.0% |
| !!! | TAACATTTTGATTATTTCAA+TGG | + | chr5.4:23573164-23573183 | MS.gene44324:intron | 15.0% |
| !!! | TATTGTGTTGTTTTAATTTT+TGG | + | chr5.4:23570236-23570255 | MS.gene44324:intron | 15.0% |
| !!! | TTAGTATGTTTTAATAGTTT+AGG | + | chr5.4:23574033-23574052 | MS.gene44324:intron | 15.0% |
| !!! | TTGAAAATTATGCATAATTT+TGG | + | chr5.4:23574108-23574127 | MS.gene44324:intron | 15.0% |
| !!! | TTGTTTTTTATGAAACATTA+GGG | + | chr5.4:23573843-23573862 | MS.gene44324:intron | 15.0% |
| !!! | TTTGTTTTTTATGAAACATT+AGG | + | chr5.4:23573842-23573861 | MS.gene44324:intron | 15.0% |
| !!! | TTTTCTTATATTCTAAATGT+TGG | + | chr5.4:23572982-23573001 | MS.gene44324:intron | 15.0% |
| !! | AAATATATAAGAATCAGCTT+AGG | - | chr5.4:23571121-23571140 | None:intergenic | 20.0% |
| !! | AATAGTTTAGGTACTAAATT+AGG | + | chr5.4:23574045-23574064 | MS.gene44324:intron | 20.0% |
| !! | AATTTCACAGATATATCATA+CGG | - | chr5.4:23574153-23574172 | None:intergenic | 20.0% |
| !! | AGAGTAATAAACCATTAATT+TGG | + | chr5.4:23573366-23573385 | MS.gene44324:intron | 20.0% |
| !! | ATAGTTTAGGTACTAAATTA+GGG | + | chr5.4:23574046-23574065 | MS.gene44324:intron | 20.0% |
| !! | ATCAAATTTAGGTATCAAAA+TGG | - | chr5.4:23572777-23572796 | None:intergenic | 20.0% |
| !! | GATTAATCACAATCAAATTT+AGG | - | chr5.4:23572788-23572807 | None:intergenic | 20.0% |
| !! | TAACTTGGGAATAATTTAAT+GGG | - | chr5.4:23571455-23571474 | None:intergenic | 20.0% |
| !! | TATGTTTATGAGTTGTAATT+TGG | + | chr5.4:23570490-23570509 | MS.gene44324:intron | 20.0% |
| !! | TCAATTTCAAATTGCAAAAT+AGG | - | chr5.4:23573753-23573772 | None:intergenic | 20.0% |
| !! | TGCAATAAAACATACTAAAA+AGG | + | chr5.4:23573451-23573470 | MS.gene44324:intron | 20.0% |
| !! | TTAAATTATTCCCAAGTTAA+AGG | + | chr5.4:23571456-23571475 | MS.gene44324:intron | 20.0% |
| !! | TTTCATAGTACAAAATACTT+CGG | - | chr5.4:23570063-23570082 | None:intergenic | 20.0% |
| !!! | AACTTATAATTCACACATTT+TGG | - | chr5.4:23573907-23573926 | None:intergenic | 20.0% |
| !!! | ACTTTTCTATTTTTGTATTC+AGG | + | chr5.4:23570534-23570553 | MS.gene44324:intron | 20.0% |
| !!! | GTTGTTTTAATTTTTGGATT+TGG | + | chr5.4:23570242-23570261 | MS.gene44324:intron | 20.0% |
| !!! | GTTTTTTAAAAAAAATACCC+AGG | + | chr5.4:23571578-23571597 | MS.gene44324:intron | 20.0% |
| !!! | TAAGCATTATTTTGAAGAAT+TGG | + | chr5.4:23569976-23569995 | MS.gene44324:CDS | 20.0% |
| !!! | TTAACTTGGGAATAATTTAA+TGG | - | chr5.4:23571456-23571475 | None:intergenic | 20.0% |
| ! | AAACTTCATTACAAAAAACC+AGG | - | chr5.4:23573579-23573598 | None:intergenic | 25.0% |
| ! | AACGATATACATTAGAGATT+AGG | + | chr5.4:23571087-23571106 | MS.gene44324:intron | 25.0% |
| ! | AATATTCTTGTCAATAGCAA+TGG | + | chr5.4:23570583-23570602 | MS.gene44324:CDS | 25.0% |
| ! | AATCAAAATGTTAACAGAGA+CGG | - | chr5.4:23573157-23573176 | None:intergenic | 25.0% |
| ! | AATGAGGTAGTTATTATTAG+AGG | + | chr5.4:23570455-23570474 | MS.gene44324:intron | 25.0% |
| ! | AATTAGTCCCTAAACTATTA+AGG | + | chr5.4:23573414-23573433 | MS.gene44324:intron | 25.0% |
| ! | ACGATATACATTAGAGATTA+GGG | + | chr5.4:23571088-23571107 | MS.gene44324:intron | 25.0% |
| ! | ATAGAAGAATATATGGATAG+AGG | + | chr5.4:23570847-23570866 | MS.gene44324:intron | 25.0% |
| ! | ATATTGATATGTGTGGTTAT+TGG | + | chr5.4:23571054-23571073 | MS.gene44324:intron | 25.0% |
| ! | ATTAGTCCCTAAACTATTAA+GGG | + | chr5.4:23573415-23573434 | MS.gene44324:intron | 25.0% |
| ! | ATTCCAGAAACAGTAAAATA+CGG | - | chr5.4:23572939-23572958 | None:intergenic | 25.0% |
| ! | ATTGAGAAATCATTATTCCT+GGG | + | chr5.4:23571382-23571401 | MS.gene44324:intron | 25.0% |
| ! | ATTTAAACCAAGTTTACACT+CGG | - | chr5.4:23571894-23571913 | None:intergenic | 25.0% |
| ! | CAATTCTCAATTCAAACAAA+AGG | - | chr5.4:23569896-23569915 | None:intergenic | 25.0% |
| ! | CCTTATTCTATAACATATCA+CGG | - | chr5.4:23570762-23570781 | None:intergenic | 25.0% |
| ! | CGTGATATGTTATAGAATAA+GGG | + | chr5.4:23570760-23570779 | MS.gene44324:intron | 25.0% |
| ! | GAATAATTTAATGGGAATGA+TGG | - | chr5.4:23571447-23571466 | None:intergenic | 25.0% |
| ! | GATAAGTTACAAGAAAAATG+AGG | + | chr5.4:23570439-23570458 | MS.gene44324:CDS | 25.0% |
| ! | GCTCAAAAATTATTATTCCT+AGG | - | chr5.4:23571642-23571661 | None:intergenic | 25.0% |
| ! | GTGAATTATAAGTTTGACAT+AGG | + | chr5.4:23573913-23573932 | MS.gene44324:intron | 25.0% |
| ! | TAATAGTTTAGGGACTAATT+TGG | - | chr5.4:23573414-23573433 | None:intergenic | 25.0% |
| ! | TATCAAAATGGATGTTATTG+AGG | - | chr5.4:23572765-23572784 | None:intergenic | 25.0% |
| ! | TCTTATATTCTAAATGTTGG+AGG | + | chr5.4:23572985-23573004 | MS.gene44324:intron | 25.0% |
| ! | TGATTGTGATTAATCAGATT+GGG | + | chr5.4:23572793-23572812 | MS.gene44324:intron | 25.0% |
| ! | TGCAAATGAAATTAGCAATT+TGG | + | chr5.4:23571200-23571219 | MS.gene44324:intron | 25.0% |
| ! | TTACATATGAGATTATCGAT+TGG | + | chr5.4:23573778-23573797 | MS.gene44324:intron | 25.0% |
| ! | TTGAATATTCCTAGGAAAAT+TGG | - | chr5.4:23571544-23571563 | None:intergenic | 25.0% |
| ! | TTGATTGTGATTAATCAGAT+TGG | + | chr5.4:23572792-23572811 | MS.gene44324:intron | 25.0% |
| ! | TTTCGGTTTCTTATGATATT+TGG | + | chr5.4:23573621-23573640 | MS.gene44324:intron | 25.0% |
| !! | AAATAACTTCCAATTTTCCT+AGG | + | chr5.4:23571532-23571551 | MS.gene44324:intron | 25.0% |
| !! | AAATGATAGAGTGTTATTAG+AGG | + | chr5.4:23571910-23571929 | MS.gene44324:CDS | 25.0% |
| !! | TGATGTATTTTCATGCTTTA+GGG | + | chr5.4:23573872-23573891 | MS.gene44324:intron | 25.0% |
| !! | TTGATGTATTTTCATGCTTT+AGG | + | chr5.4:23573871-23573890 | MS.gene44324:intron | 25.0% |
| !!! | ACAATCTGTTTTTGACTTTT+TGG | + | chr5.4:23570998-23571017 | MS.gene44324:intron | 25.0% |
| !!! | CAATTTTCGCATTTTTTGTT+AGG | + | chr5.4:23569698-23569717 | MS.gene44324:intron | 25.0% |
| !!! | TAATAAGTTTCTGTTTTGAG+AGG | + | chr5.4:23572236-23572255 | MS.gene44324:intron | 25.0% |
| !!! | TGATTATTTCAATGGATTGA+TGG | + | chr5.4:23573172-23573191 | MS.gene44324:intron | 25.0% |
| !!! | TTATTTTGAAGAATTGGAAG+AGG | + | chr5.4:23569982-23570001 | MS.gene44324:CDS | 25.0% |
| !!! | TTTTTCAAGGACAAAATTGA+CGG | + | chr5.4:23574080-23574099 | MS.gene44324:intron | 25.0% |
| !!! | TTTTTGTATTCAGGTTTTCT+TGG | + | chr5.4:23570543-23570562 | MS.gene44324:intron | 25.0% |
| AAAATGCTTTCTCTTTCTGT+GGG | - | chr5.4:23572282-23572301 | None:intergenic | 30.0% | |
| AAACTAACCAAAGGACTAAA+GGG | - | chr5.4:23573499-23573518 | None:intergenic | 30.0% | |
| AAAGTCAAAAACAGATTGTG+AGG | - | chr5.4:23570997-23571016 | None:intergenic | 30.0% | |
| AAATACTCCATCATGAATGT+TGG | - | chr5.4:23571822-23571841 | None:intergenic | 30.0% | |
| AACCGAAATCATCACATAAT+CGG | - | chr5.4:23573609-23573628 | None:intergenic | 30.0% | |
| AACCTGTTTATCAATGAGTT+TGG | - | chr5.4:23569604-23569623 | None:intergenic | 30.0% | |
| ACACTATACACAATATGCAA+TGG | - | chr5.4:23573126-23573145 | None:intergenic | 30.0% | |
| AGACAAACCCTTAATAGTTT+AGG | - | chr5.4:23573425-23573444 | None:intergenic | 30.0% | |
| AGGGAAGAAACAAAAATTGA+AGG | - | chr5.4:23573542-23573561 | None:intergenic | 30.0% | |
| AGTAGATGCTTTGATTGATT+TGG | + | chr5.4:23574191-23574210 | MS.gene44324:intron | 30.0% | |
| ATACCCAGGAATATAAAGAA+GGG | - | chr5.4:23571613-23571632 | None:intergenic | 30.0% | |
| ATCTAATGTTGAACTCTAAG+TGG | - | chr5.4:23572031-23572050 | None:intergenic | 30.0% | |
| ATTAAACCAATCCATAAGCA+TGG | - | chr5.4:23571262-23571281 | None:intergenic | 30.0% | |
| ATTATTCCCAAGTTAAAGGA+TGG | + | chr5.4:23571460-23571479 | MS.gene44324:intron | 30.0% | |
| ATTTATGGCAGTCTAAATTC+TGG | - | chr5.4:23572540-23572559 | None:intergenic | 30.0% | |
| ATTTGGTCTGTAATGAATTC+TGG | + | chr5.4:23573638-23573657 | MS.gene44324:intron | 30.0% | |
| CCGTGATATGTTATAGAATA+AGG | + | chr5.4:23570759-23570778 | MS.gene44324:intron | 30.0% | |
| CCTCTGTCTGATAAAAAATT+GGG | + | chr5.4:23573051-23573070 | MS.gene44324:intron | 30.0% | |
| CTATTAACCAACATTCATGA+TGG | + | chr5.4:23571812-23571831 | MS.gene44324:intron | 30.0% | |
| CTCAATCTTGTAACAAACAT+GGG | - | chr5.4:23571368-23571387 | None:intergenic | 30.0% | |
| CTCCTATGTTCCTAATTAAT+GGG | + | chr5.4:23570942-23570961 | MS.gene44324:intron | 30.0% | |
| CTTGATGAAATTATGGACTT+TGG | + | chr5.4:23570293-23570312 | MS.gene44324:CDS | 30.0% | |
| GACAAACCCTTAATAGTTTA+GGG | - | chr5.4:23573424-23573443 | None:intergenic | 30.0% | |
| GATTGAGAAATCATTATTCC+TGG | + | chr5.4:23571381-23571400 | MS.gene44324:intron | 30.0% | |
| GTTTATGAGTTGTAATTTGG+TGG | + | chr5.4:23570493-23570512 | MS.gene44324:intron | 30.0% | |
| TAAACTAACCAAAGGACTAA+AGG | - | chr5.4:23573500-23573519 | None:intergenic | 30.0% | |
| TAAGACTGATGCTTATAGAA+TGG | + | chr5.4:23570358-23570377 | MS.gene44324:CDS | 30.0% | |
| TAATTAGATCTGACGTTGTT+GGG | + | chr5.4:23570611-23570630 | MS.gene44324:CDS | 30.0% | |
| TAGAATCGAATCGAATCAAT+TGG | + | chr5.4:23573297-23573316 | MS.gene44324:intron | 30.0% | |
| TCTAATGTTGAACTCTAAGT+GGG | - | chr5.4:23572030-23572049 | None:intergenic | 30.0% | |
| TCTATTGAAGGGAAAACTAT+TGG | + | chr5.4:23570906-23570925 | MS.gene44324:intron | 30.0% | |
| TCTCAATCTTGTAACAAACA+TGG | - | chr5.4:23571369-23571388 | None:intergenic | 30.0% | |
| TCTCCTATGTTCCTAATTAA+TGG | + | chr5.4:23570941-23570960 | MS.gene44324:intron | 30.0% | |
| TGAAATTAGCAATTTGGACT+TGG | + | chr5.4:23571206-23571225 | MS.gene44324:intron | 30.0% | |
| TGAAGATTATTGAGAAGAGT+GGG | + | chr5.4:23574262-23574281 | MS.gene44324:CDS | 30.0% | |
| TGAGCTACTTGATGAAATTA+TGG | + | chr5.4:23570286-23570305 | MS.gene44324:CDS | 30.0% | |
| TGGTGAAACAAGGATATTTA+TGG | - | chr5.4:23572555-23572574 | None:intergenic | 30.0% | |
| TTAATTAGATCTGACGTTGT+TGG | + | chr5.4:23570610-23570629 | MS.gene44324:CDS | 30.0% | |
| TTATTCCCAAGTTAAAGGAT+GGG | + | chr5.4:23571461-23571480 | MS.gene44324:intron | 30.0% | |
| TTGAAATTGGATCTGAGAAA+TGG | - | chr5.4:23569637-23569656 | None:intergenic | 30.0% | |
| TTGAAGATTATTGAGAAGAG+TGG | + | chr5.4:23574261-23574280 | MS.gene44324:CDS | 30.0% | |
| TTGAGATTATGGTAAAAGCT+AGG | + | chr5.4:23572390-23572409 | MS.gene44324:CDS | 30.0% | |
| TTGTATCTAGCTGAAATTTG+AGG | + | chr5.4:23571175-23571194 | MS.gene44324:intron | 30.0% | |
| TTTAAACCAAGTTTACACTC+GGG | - | chr5.4:23571893-23571912 | None:intergenic | 30.0% | |
| TTTAATCAGCTAGTACACTT+GGG | + | chr5.4:23571276-23571295 | MS.gene44324:intron | 30.0% | |
| TTTATGGCAGTCTAAATTCT+GGG | - | chr5.4:23572539-23572558 | None:intergenic | 30.0% | |
| ! | AGAGACTAAATAGATGGATT+GGG | + | chr5.4:23573992-23574011 | MS.gene44324:intron | 30.0% |
| ! | ATACCGTATTTTACTGTTTC+TGG | + | chr5.4:23572933-23572952 | MS.gene44324:CDS | 30.0% |
| ! | GATTGCAACATACAGTTTTA+TGG | + | chr5.4:23570733-23570752 | MS.gene44324:intron | 30.0% |
| ! | GGAGAGAATGATATTTTTCA+AGG | + | chr5.4:23574067-23574086 | MS.gene44324:intron | 30.0% |
| ! | GTTGAGTGTGAATTTGAAAT+TGG | - | chr5.4:23569650-23569669 | None:intergenic | 30.0% |
| ! | TCAGGTTAAGCCTTTAATTT+GGG | + | chr5.4:23572331-23572350 | MS.gene44324:intron | 30.0% |
| ! | TGAAAACTGACATGTGTTTT+TGG | + | chr5.4:23571845-23571864 | MS.gene44324:intron | 30.0% |
| ! | TGAAGATGAGAACATTTTTG+AGG | + | chr5.4:23570638-23570657 | MS.gene44324:CDS | 30.0% |
| ! | TTACATTTCTGGGAATACAT+GGG | + | chr5.4:23571324-23571343 | MS.gene44324:intron | 30.0% |
| ! | TTATGTCTGGCATTTTATGA+AGG | + | chr5.4:23572097-23572116 | MS.gene44324:intron | 30.0% |
| ! | TTCAGGTTAAGCCTTTAATT+TGG | + | chr5.4:23572330-23572349 | MS.gene44324:intron | 30.0% |
| ! | TTTACATTTCTGGGAATACA+TGG | + | chr5.4:23571323-23571342 | MS.gene44324:intron | 30.0% |
| !! | ATAGAAAGCACCCATTAATT+AGG | - | chr5.4:23570955-23570974 | None:intergenic | 30.0% |
| !! | GCTAGTTCTAAAATTATGTC+TGG | + | chr5.4:23572084-23572103 | MS.gene44324:intron | 30.0% |
| !! | TGAAGGTTTTATAGAGTACA+AGG | - | chr5.4:23573525-23573544 | None:intergenic | 30.0% |
| !! | TGTTAGAGAAGTTTGTTAGT+TGG | + | chr5.4:23570803-23570822 | MS.gene44324:intron | 30.0% |
| !! | TTTGATTGATTTGGTTGAGA+TGG | + | chr5.4:23574200-23574219 | MS.gene44324:intron | 30.0% |
| !!! | AGGCTATTTTTTTCTGCATT+GGG | + | chr5.4:23573005-23573024 | MS.gene44324:intron | 30.0% |
| !!! | TTTTACTGTTTCTGGAATAC+AGG | + | chr5.4:23572941-23572960 | MS.gene44324:CDS | 30.0% |
| !!! | TTTTGAGATCATCTAGCTTT+TGG | + | chr5.4:23570706-23570725 | MS.gene44324:intron | 30.0% |
| !!! | TTTTTTCTTGGCAGAAGATT+GGG | + | chr5.4:23572475-23572494 | MS.gene44324:intron | 30.0% |
| !!! | TTTTTTTCTTGGCAGAAGAT+TGG | + | chr5.4:23572474-23572493 | MS.gene44324:intron | 30.0% |
| AAAAGCTAGGAGTCAGTTTA+AGG | + | chr5.4:23572403-23572422 | MS.gene44324:CDS | 35.0% | |
| AACTCCCTTCTTTATATTCC+TGG | + | chr5.4:23571606-23571625 | MS.gene44324:intron | 35.0% | |
| AAGATACGGTACAATCAACA+AGG | - | chr5.4:23572310-23572329 | None:intergenic | 35.0% | |
| AAGGGTAATTAGAGTAGTTC+AGG | + | chr5.4:23570778-23570797 | MS.gene44324:intron | 35.0% | |
| AAGTTAAAGGATGGGAAAGT+GGG | + | chr5.4:23571469-23571488 | MS.gene44324:intron | 35.0% | |
| AATCCATAAGCATGGAGAAT+TGG | - | chr5.4:23571254-23571273 | None:intergenic | 35.0% | |
| AATTAGATCTGACGTTGTTG+GGG | + | chr5.4:23570612-23570631 | MS.gene44324:CDS | 35.0% | |
| AATTCTCCATGCTTATGGAT+TGG | + | chr5.4:23571253-23571272 | MS.gene44324:intron | 35.0% | |
| ACAAACATTAGCGTTCTGTT+TGG | - | chr5.4:23570100-23570119 | None:intergenic | 35.0% | |
| ACAAGGACTAAACTAACCAA+AGG | - | chr5.4:23573508-23573527 | None:intergenic | 35.0% | |
| ACTCCCTTCTTTATATTCCT+GGG | + | chr5.4:23571607-23571626 | MS.gene44324:intron | 35.0% | |
| AGAGTAGTGACTCTATTGAA+GGG | + | chr5.4:23570895-23570914 | MS.gene44324:intron | 35.0% | |
| AGGCTTAACCTGAAAAGATA+CGG | - | chr5.4:23572324-23572343 | None:intergenic | 35.0% | |
| AGGGTAATTAGAGTAGTTCA+GGG | + | chr5.4:23570779-23570798 | MS.gene44324:intron | 35.0% | |
| ATACCAGTGAATCTGCTAAT+CGG | - | chr5.4:23573679-23573698 | None:intergenic | 35.0% | |
| ATCATTATTCCTGGGTATCA+AGG | + | chr5.4:23571390-23571409 | MS.gene44324:intron | 35.0% | |
| ATCTCAAATTTCACGCGTAT+AGG | - | chr5.4:23572915-23572934 | None:intergenic | 35.0% | |
| ATCTTTGCCTCTGTATATTG+AGG | - | chr5.4:23570323-23570342 | None:intergenic | 35.0% | |
| ATGGGTGAGATACATAACAA+TGG | + | chr5.4:23574299-23574318 | MS.gene44324:CDS | 35.0% | |
| ATTGTTATGTATCTCACCCA+TGG | - | chr5.4:23574300-23574319 | None:intergenic | 35.0% | |
| CAAAATGCTTTCTCTTTCTG+TGG | - | chr5.4:23572283-23572302 | None:intergenic | 35.0% | |
| CACCAAACTCATTGATAAAC+AGG | + | chr5.4:23569599-23569618 | MS.gene44324:CDS | 35.0% | |
| CACCCATTAATTAGGAACAT+AGG | - | chr5.4:23570947-23570966 | None:intergenic | 35.0% | |
| CATACCCAGGAATATAAAGA+AGG | - | chr5.4:23571614-23571633 | None:intergenic | 35.0% | |
| CATCAATTTGACCATTTGGA+TGG | - | chr5.4:23573971-23573990 | None:intergenic | 35.0% | |
| CATCCAAATGGTCAAATTGA+TGG | + | chr5.4:23573969-23573988 | MS.gene44324:intron | 35.0% | |
| CGAATCGAATCAATTGGTAA+TGG | + | chr5.4:23573303-23573322 | MS.gene44324:intron | 35.0% | |
| CTAAAAGACCAAGACAAACA+TGG | - | chr5.4:23574232-23574251 | None:intergenic | 35.0% | |
| CTCCGATTATGTGATGATTT+CGG | + | chr5.4:23573604-23573623 | MS.gene44324:intron | 35.0% | |
| CTCCTTTCTTTGATACTTTC+AGG | + | chr5.4:23572818-23572837 | MS.gene44324:intron | 35.0% | |
| GAGAGACTAAATAGATGGAT+TGG | + | chr5.4:23573991-23574010 | MS.gene44324:intron | 35.0% | |
| GCCTCTGTCTGATAAAAAAT+TGG | + | chr5.4:23573050-23573069 | MS.gene44324:intron | 35.0% | |
| GCTATCTGCAAAATATCTAC+CGG | - | chr5.4:23571744-23571763 | None:intergenic | 35.0% | |
| GTTTAATCAGCTAGTACACT+TGG | + | chr5.4:23571275-23571294 | MS.gene44324:intron | 35.0% | |
| TAGAGTAGTGACTCTATTGA+AGG | + | chr5.4:23570894-23570913 | MS.gene44324:intron | 35.0% | |
| TAGTTCAGGAGCCAAATTAA+TGG | - | chr5.4:23573380-23573399 | None:intergenic | 35.0% | |
| TATAAGAATCAGCTTAGGCT+TGG | - | chr5.4:23571116-23571135 | None:intergenic | 35.0% | |
| TCTCCATCAATTTGACCATT+TGG | - | chr5.4:23573975-23573994 | None:intergenic | 35.0% | |
| TGATGAACAATCTCAAGATC+CGG | + | chr5.4:23569722-23569741 | MS.gene44324:CDS | 35.0% | |
| TGATGGAGAGACTAAATAGA+TGG | + | chr5.4:23573986-23574005 | MS.gene44324:intron | 35.0% | |
| TGGTTATCCTCAATATACAG+AGG | + | chr5.4:23570313-23570332 | MS.gene44324:CDS | 35.0% | |
| TTAATCAGCTAGTACACTTG+GGG | + | chr5.4:23571277-23571296 | MS.gene44324:intron | 35.0% | |
| TTGAGATCTACTGCATTTGT+AGG | + | chr5.4:23570678-23570697 | MS.gene44324:intron | 35.0% | |
| TTTGCTTCCACCCAAATTAA+AGG | - | chr5.4:23572344-23572363 | None:intergenic | 35.0% | |
| TTTGGCATATTCTAATGCAG+TGG | + | chr5.4:23571863-23571882 | MS.gene44324:intron | 35.0% | |
| ! | AATGGGAATGATGGAAGTTA+TGG | - | chr5.4:23571438-23571457 | None:intergenic | 35.0% |
| ! | ACTTTCCCATCCTTTAACTT+GGG | - | chr5.4:23571469-23571488 | None:intergenic | 35.0% |
| ! | AGTTGTAATTTGGTGGTTTG+AGG | + | chr5.4:23570500-23570519 | MS.gene44324:intron | 35.0% |
| ! | ATGGGAAGTTATTTCATTCC+TGG | - | chr5.4:23571419-23571438 | None:intergenic | 35.0% |
| ! | ATGGGAATGATGGAAGTTAT+GGG | - | chr5.4:23571437-23571456 | None:intergenic | 35.0% |
| ! | CAGATCAATGCATCTTTTTC+AGG | - | chr5.4:23572691-23572710 | None:intergenic | 35.0% |
| ! | CATATCTGTCAATTTTCTGC+CGG | + | chr5.4:23571722-23571741 | MS.gene44324:intron | 35.0% |
| ! | CATATGAGATTATCGATTGG+AGG | + | chr5.4:23573781-23573800 | MS.gene44324:intron | 35.0% |
| ! | CTGAAAAAGATGCATTGATC+TGG | + | chr5.4:23572689-23572708 | MS.gene44324:CDS | 35.0% |
| ! | TCCTTGTTTCACCAACTAAT+AGG | + | chr5.4:23572561-23572580 | MS.gene44324:intron | 35.0% |
| ! | TGATTGTACCGTATCTTTTC+AGG | + | chr5.4:23572313-23572332 | MS.gene44324:intron | 35.0% |
| ! | TGGGAAGTTATTTCATTCCT+GGG | - | chr5.4:23571418-23571437 | None:intergenic | 35.0% |
| ! | TTTTTCTTGGCAGAAGATTG+GGG | + | chr5.4:23572476-23572495 | MS.gene44324:intron | 35.0% |
| !! | CATGTTTGTCTTGGTCTTTT+AGG | + | chr5.4:23574230-23574249 | MS.gene44324:intron | 35.0% |
| !! | CTCCTGAAAGTATCAAAGAA+AGG | - | chr5.4:23572823-23572842 | None:intergenic | 35.0% |
| !! | GAGACTAAATAGATGGATTG+GGG | + | chr5.4:23573993-23574012 | MS.gene44324:intron | 35.0% |
| !! | TAAATAGATGGATTGGGGAA+TGG | + | chr5.4:23573998-23574017 | MS.gene44324:intron | 35.0% |
| !! | TAGGGATAACTTTGTTGTTG+TGG | + | chr5.4:23570012-23570031 | MS.gene44324:CDS | 35.0% |
| !! | TATTCAGGTTTTCTTGGATG+TGG | + | chr5.4:23570549-23570568 | MS.gene44324:intron | 35.0% |
| !! | TCCTATTAGTTGGTGAAACA+AGG | - | chr5.4:23572565-23572584 | None:intergenic | 35.0% |
| !! | TTGGTAATGGAAAAGAGAAC+TGG | + | chr5.4:23573316-23573335 | MS.gene44324:intron | 35.0% |
| !!! | AAAGAAGGGAGTTTTATTCC+TGG | - | chr5.4:23571599-23571618 | None:intergenic | 35.0% |
| !!! | AAGAAGGGAGTTTTATTCCT+GGG | - | chr5.4:23571598-23571617 | None:intergenic | 35.0% |
| !!! | ATTCGTGTGTTTTTTCTTGC+AGG | + | chr5.4:23569949-23569968 | MS.gene44324:intron | 35.0% |
| !!! | CCCAATTTTTTATCAGACAG+AGG | - | chr5.4:23573054-23573073 | None:intergenic | 35.0% |
| !!! | GAGGCTATTTTTTTCTGCAT+TGG | + | chr5.4:23573004-23573023 | MS.gene44324:intron | 35.0% |
| !!! | TAAGTTTCTGTTTTGAGAGG+TGG | + | chr5.4:23572239-23572258 | MS.gene44324:intron | 35.0% |
| AATAGGTCGAGTTTCAGTCA+TGG | - | chr5.4:23573736-23573755 | None:intergenic | 40.0% | |
| AATTGGAAGAGGAATCGCTT+AGG | + | chr5.4:23569993-23570012 | MS.gene44324:CDS | 40.0% | |
| ACACCGTTATCGTAAACAAC+CGG | - | chr5.4:23569744-23569763 | None:intergenic | 40.0% | |
| ACCTCACTGCGTGAATTAAA+AGG | - | chr5.4:23572510-23572529 | None:intergenic | 40.0% | |
| AGGTCGGTCATACTGAATAA+TGG | + | chr5.4:23571698-23571717 | MS.gene44324:intron | 40.0% | |
| AGTTACTCAAAGACCTCCTA+TGG | + | chr5.4:23570382-23570401 | MS.gene44324:CDS | 40.0% | |
| AGTTTGACATAGGAGACAGT+TGG | + | chr5.4:23573923-23573942 | MS.gene44324:intron | 40.0% | |
| ATATGTGTCTTGTAGACGTC+TGG | + | chr5.4:23570155-23570174 | MS.gene44324:intron | 40.0% | |
| ATATGTGTGGTTATTGGCGA+GGG | + | chr5.4:23571060-23571079 | MS.gene44324:intron | 40.0% | |
| ATCAAATCGAACGATCCATC+AGG | - | chr5.4:23572174-23572193 | None:intergenic | 40.0% | |
| ATTGGAAGAGGAATCGCTTA+GGG | + | chr5.4:23569994-23570013 | MS.gene44324:CDS | 40.0% | |
| ATTTCTTTCATCCCTCCTGA+TGG | + | chr5.4:23572156-23572175 | MS.gene44324:CDS | 40.0% | |
| CAACTCAATCTCGACATTTG+TGG | - | chr5.4:23572605-23572624 | None:intergenic | 40.0% | |
| CAAGTTAAAGGATGGGAAAG+TGG | + | chr5.4:23571468-23571487 | MS.gene44324:intron | 40.0% | |
| CACTTTCCCATCCTTTAACT+TGG | - | chr5.4:23571470-23571489 | None:intergenic | 40.0% | |
| CCTAATGTTCGAACGTCAAT+GGG | + | chr5.4:23572649-23572668 | MS.gene44324:CDS | 40.0% | |
| GAAGAGTCGGATTGAGATTA+TGG | + | chr5.4:23572379-23572398 | MS.gene44324:CDS | 40.0% | |
| GAGAACTGGACATCAGAAAA+AGG | + | chr5.4:23573330-23573349 | MS.gene44324:intron | 40.0% | |
| GATCCGGTTGTTTACGATAA+CGG | + | chr5.4:23569738-23569757 | MS.gene44324:CDS | 40.0% | |
| GCACACTCTTGAATATTCCT+AGG | - | chr5.4:23571552-23571571 | None:intergenic | 40.0% | |
| GCTTCCTCATCTGTTATACT+GGG | - | chr5.4:23572873-23572892 | None:intergenic | 40.0% | |
| GGTAATCACCATGTTTGTCT+TGG | + | chr5.4:23574221-23574240 | MS.gene44324:intron | 40.0% | |
| GGTGAGATACATAACAATGG+CGG | + | chr5.4:23574302-23574321 | MS.gene44324:CDS | 40.0% | |
| GTACCAATTCTCCATGCTTA+TGG | + | chr5.4:23571248-23571267 | MS.gene44324:intron | 40.0% | |
| GTGAGATACATAACAATGGC+GGG | + | chr5.4:23574303-23574322 | MS.gene44324:CDS | 40.0% | |
| GTTTGACATAGGAGACAGTT+GGG | + | chr5.4:23573924-23573943 | MS.gene44324:intron | 40.0% | |
| TAATCAGCTAGTACACTTGG+GGG | + | chr5.4:23571278-23571297 | MS.gene44324:intron | 40.0% | |
| TATGTGTCTTGTAGACGTCT+GGG | + | chr5.4:23570156-23570175 | MS.gene44324:intron | 40.0% | |
| TATTGAGAAGAGTGGGTATC+AGG | + | chr5.4:23574269-23574288 | MS.gene44324:CDS | 40.0% | |
| TCAGCTGTGAATGTATACAG+TGG | - | chr5.4:23571772-23571791 | None:intergenic | 40.0% | |
| TCCTAATGTTCGAACGTCAA+TGG | + | chr5.4:23572648-23572667 | MS.gene44324:CDS | 40.0% | |
| TGACGTTCGAACATTAGGAT+TGG | - | chr5.4:23572647-23572666 | None:intergenic | 40.0% | |
| TGCTTCCTCATCTGTTATAC+TGG | - | chr5.4:23572874-23572893 | None:intergenic | 40.0% | |
| TGGACATCAGAAAAAGGATC+TGG | + | chr5.4:23573336-23573355 | MS.gene44324:intron | 40.0% | |
| TGGAGAGAAAGTGATAGTTC+AGG | - | chr5.4:23573394-23573413 | None:intergenic | 40.0% | |
| TTGGATCTGAGAAATGGAAG+TGG | - | chr5.4:23569631-23569650 | None:intergenic | 40.0% | |
| TTTCCGATTAGCAGATTCAC+TGG | + | chr5.4:23573673-23573692 | MS.gene44324:intron | 40.0% | |
| ! | AAGCTTTCGATTGGAAGTGT+TGG | + | chr5.4:23570188-23570207 | MS.gene44324:intron | 40.0% |
| ! | AGAGTGTTATTAGAGGCACA+AGG | + | chr5.4:23571917-23571936 | MS.gene44324:CDS | 40.0% |
| ! | ATTTCTGGGAATACATGGGT+AGG | + | chr5.4:23571328-23571347 | MS.gene44324:intron | 40.0% |
| ! | CATTTTCAAATCGAGCCAAC+CGG | - | chr5.4:23572128-23572147 | None:intergenic | 40.0% |
| ! | CGTATAGGAGCTTTTCTTTC+AGG | - | chr5.4:23572900-23572919 | None:intergenic | 40.0% |
| ! | CGTTCGATTTGATGACATAC+AGG | + | chr5.4:23572181-23572200 | MS.gene44324:CDS | 40.0% |
| ! | GAGTTTGGTGAAGAAACGTT+CGG | - | chr5.4:23569589-23569608 | None:intergenic | 40.0% |
| ! | GGAGGGTATATTGATATGTG+TGG | + | chr5.4:23571047-23571066 | MS.gene44324:intron | 40.0% |
| ! | TTGGTGTTTCTACTCGTATG+TGG | + | chr5.4:23571017-23571036 | MS.gene44324:intron | 40.0% |
| ! | TTTCTGGGAATACATGGGTA+GGG | + | chr5.4:23571329-23571348 | MS.gene44324:intron | 40.0% |
| !! | ATGGATTGGGGAATGGTTTA+AGG | + | chr5.4:23574005-23574024 | MS.gene44324:intron | 40.0% |
| !! | GCATTTTATGAAGGTGTGTC+CGG | + | chr5.4:23572106-23572125 | MS.gene44324:intron | 40.0% |
| !! | GGTTAAGCCTTTAATTTGGG+TGG | + | chr5.4:23572334-23572353 | MS.gene44324:intron | 40.0% |
| !! | TCCTTTTAATTCACGCAGTG+AGG | + | chr5.4:23572506-23572525 | MS.gene44324:intron | 40.0% |
| !! | TTAGGATTGGTTGCATCAAC+AGG | - | chr5.4:23572634-23572653 | None:intergenic | 40.0% |
| !! | TTGAAAAGCACTCGAAGAGT+CGG | + | chr5.4:23572366-23572385 | MS.gene44324:CDS | 40.0% |
| AAAATTCGATCCTTCCCTGG+AGG | + | chr5.4:23572712-23572731 | MS.gene44324:CDS | 45.0% | |
| AAATCGAACGATCCATCAGG+AGG | - | chr5.4:23572171-23572190 | None:intergenic | 45.0% | |
| AATCAGCTAGTACACTTGGG+GGG | + | chr5.4:23571279-23571298 | MS.gene44324:intron | 45.0% | |
| AATCGAACGATCCATCAGGA+GGG | - | chr5.4:23572170-23572189 | None:intergenic | 45.0% | |
| ACAGCATTAGTCACTGCCAT+AGG | - | chr5.4:23570401-23570420 | None:intergenic | 45.0% | |
| ACCAGGAGAAAGAGAAAGTG+AGG | - | chr5.4:23573562-23573581 | None:intergenic | 45.0% | |
| ATGTGTCTTGTAGACGTCTG+GGG | + | chr5.4:23570157-23570176 | MS.gene44324:intron | 45.0% | |
| CAAGGGAAAAGCGATAGACT+TGG | + | chr5.4:23571949-23571968 | MS.gene44324:CDS | 45.0% | |
| CAGTGACTAATGCTGTGTCT+TGG | + | chr5.4:23570405-23570424 | MS.gene44324:CDS | 45.0% | |
| CCAGGAGAAAGAGAAAGTGA+GGG | - | chr5.4:23573561-23573580 | None:intergenic | 45.0% | |
| CCCATTGACGTTCGAACATT+AGG | - | chr5.4:23572652-23572671 | None:intergenic | 45.0% | |
| CCTCATCTGTTATACTGGGA+AGG | - | chr5.4:23572869-23572888 | None:intergenic | 45.0% | |
| CCTTCCCAGTATAACAGATG+AGG | + | chr5.4:23572866-23572885 | MS.gene44324:CDS | 45.0% | |
| CGAGTTTCAGTCATGGTTGA+GGG | - | chr5.4:23573729-23573748 | None:intergenic | 45.0% | |
| CTACTCGTATGTGGATACTC+TGG | + | chr5.4:23571026-23571045 | MS.gene44324:intron | 45.0% | |
| GATATGTGTGGTTATTGGCG+AGG | + | chr5.4:23571059-23571078 | MS.gene44324:intron | 45.0% | |
| GCAATGGACAAGCTTTCGAT+TGG | + | chr5.4:23570179-23570198 | MS.gene44324:intron | 45.0% | |
| GGAGTCAGTTTAAGGAACGT+AGG | + | chr5.4:23572411-23572430 | MS.gene44324:CDS | 45.0% | |
| TCGAGTTTCAGTCATGGTTG+AGG | - | chr5.4:23573730-23573749 | None:intergenic | 45.0% | |
| TCGTATGTGGATACTCTGGA+GGG | + | chr5.4:23571030-23571049 | MS.gene44324:intron | 45.0% | |
| TGGAAAATTCGATCCTTCCC+TGG | + | chr5.4:23572709-23572728 | MS.gene44324:CDS | 45.0% | |
| TTCCTAGGAACAACATACCC+AGG | - | chr5.4:23571627-23571646 | None:intergenic | 45.0% | |
| TTCCTGGGTATGTTGTTCCT+AGG | + | chr5.4:23571622-23571641 | MS.gene44324:intron | 45.0% | |
| TTGGTTGCATCAACAGGAAC+AGG | - | chr5.4:23572628-23572647 | None:intergenic | 45.0% | |
| ! | TCAGGTTTTCTTGGATGTGG+TGG | + | chr5.4:23570552-23570571 | MS.gene44324:intron | 45.0% |
| ! | TTTATGAAGGTGTGTCCGGT+TGG | + | chr5.4:23572110-23572129 | MS.gene44324:intron | 45.0% |
| !! | CAAGTCTATCGCTTTTCCCT+TGG | - | chr5.4:23571951-23571970 | None:intergenic | 45.0% |
| !! | CAGACAGAGGCATTGAATGA+AGG | - | chr5.4:23573041-23573060 | None:intergenic | 45.0% |
| !! | TCGTGGGGGCATTTATTTCA+CGG | - | chr5.4:23571665-23571684 | None:intergenic | 45.0% |
| !!! | ATACTTTAAAAAAAAAAAAA+AGG | + | chr5.4:23571509-23571528 | MS.gene44324:intron | 5.0% |
| ACCTCCTAAAGAACACCTCG+TGG | - | chr5.4:23571682-23571701 | None:intergenic | 50.0% | |
| ATCAGCTAGTACACTTGGGG+GGG | + | chr5.4:23571280-23571299 | MS.gene44324:intron | 50.0% | |
| CCCTCACTTTCTCTTTCTCC+TGG | + | chr5.4:23573558-23573577 | MS.gene44324:intron | 50.0% | |
| CCTCCTAAAGAACACCTCGT+GGG | - | chr5.4:23571681-23571700 | None:intergenic | 50.0% | |
| CTCCTAAAGAACACCTCGTG+GGG | - | chr5.4:23571680-23571699 | None:intergenic | 50.0% | |
| CTCGTATGTGGATACTCTGG+AGG | + | chr5.4:23571029-23571048 | MS.gene44324:intron | 50.0% | |
| CTGTGTCTTGGCGAAGTGAA+GGG | + | chr5.4:23570417-23570436 | MS.gene44324:CDS | 50.0% | |
| CTGTTCCTCCTCGACATCAA+AGG | + | chr5.4:23569513-23569532 | MS.gene44324:CDS | 50.0% | |
| GAAGAAACGTTCGGCTTCGA+TGG | - | chr5.4:23569580-23569599 | None:intergenic | 50.0% | |
| GACATACAGGCTCAGTACAC+AGG | + | chr5.4:23572194-23572213 | MS.gene44324:CDS | 50.0% | |
| GCACAAGGCAGAACAACCAA+GGG | + | chr5.4:23571932-23571951 | MS.gene44324:CDS | 50.0% | |
| GCATTAGTCACTGCCATAGG+AGG | - | chr5.4:23570398-23570417 | None:intergenic | 50.0% | |
| GGCAGTTAACGCCATCCAAA+TGG | + | chr5.4:23573957-23573976 | MS.gene44324:intron | 50.0% | |
| GGTATGCCCGAGTGTAAACT+TGG | + | chr5.4:23571884-23571903 | MS.gene44324:CDS | 50.0% | |
| GTGAAATAAATGCCCCCACG+AGG | + | chr5.4:23571664-23571683 | MS.gene44324:intron | 50.0% | |
| TCCTAAAGAACACCTCGTGG+GGG | - | chr5.4:23571679-23571698 | None:intergenic | 50.0% | |
| TCGAAGATACCTTGCCTCCA+GGG | - | chr5.4:23572729-23572748 | None:intergenic | 50.0% | |
| TGGGTATCAGGCTCTTCCAT+GGG | + | chr5.4:23574281-23574300 | MS.gene44324:CDS | 50.0% | |
| TTCGAAGATACCTTGCCTCC+AGG | - | chr5.4:23572730-23572749 | None:intergenic | 50.0% | |
| ! | CGAGGTGTTCTTTAGGAGGT+CGG | + | chr5.4:23571682-23571701 | MS.gene44324:intron | 50.0% |
| ! | GAGGCAAGGTATCTTCGAAG+TGG | + | chr5.4:23572731-23572750 | MS.gene44324:intron | 50.0% |
| !! | CGTGGGGGCATTTATTTCAC+GGG | - | chr5.4:23571664-23571683 | None:intergenic | 50.0% |
| AGATACCTTGCCTCCAGGGA+AGG | - | chr5.4:23572725-23572744 | None:intergenic | 55.0% | |
| GAAACGTTCGGCTTCGATGG+CGG | - | chr5.4:23569577-23569596 | None:intergenic | 55.0% | |
| GATGGCGTTAACTGCCACGT+TGG | - | chr5.4:23573953-23573972 | None:intergenic | 55.0% | |
| GCAATGGTGAGAGAGACAGC+AGG | - | chr5.4:23573110-23573129 | None:intergenic | 55.0% | |
| GCTGTGTCTTGGCGAAGTGA+AGG | + | chr5.4:23570416-23570435 | MS.gene44324:CDS | 55.0% | |
| GGCACAAGGCAGAACAACCA+AGG | + | chr5.4:23571931-23571950 | MS.gene44324:CDS | 55.0% | |
| GTGGGTATCAGGCTCTTCCA+TGG | + | chr5.4:23574280-23574299 | MS.gene44324:CDS | 55.0% | |
| TCCTGGGAACCTTGATACCC+AGG | - | chr5.4:23571402-23571421 | None:intergenic | 55.0% | |
| TCCTGGGTATCAAGGTTCCC+AGG | + | chr5.4:23571398-23571417 | MS.gene44324:intron | 55.0% | |
| TGGTGAGAGAGACAGCAGGA+AGG | - | chr5.4:23573106-23573125 | None:intergenic | 55.0% | |
| ! | AGACAGTTGGGTTGCCAACG+TGG | + | chr5.4:23573936-23573955 | MS.gene44324:intron | 55.0% |
| ! | CCCACGAGGTGTTCTTTAGG+AGG | + | chr5.4:23571678-23571697 | MS.gene44324:intron | 55.0% |
| ! | CTTGTAGACGTCTGGGGCAA+TGG | + | chr5.4:23570163-23570182 | MS.gene44324:intron | 55.0% |
| ! | TGGCGGGAGAGTATGAGCTA+AGG | + | chr5.4:23574319-23574338 | MS.gene44324:CDS | 55.0% |
| AGTCACGCCAGACGAGGATG+CGG | - | chr5.4:23569539-23569558 | None:intergenic | 60.0% | |
| GGATGCGGCCTTTGATGTCG+AGG | - | chr5.4:23569524-23569543 | None:intergenic | 60.0% | |
| GTGTGGTTATTGGCGAGGGC+TGG | + | chr5.4:23571064-23571083 | MS.gene44324:intron | 60.0% | |
| TCAAAGGCCGCATCCTCGTC+TGG | + | chr5.4:23569529-23569548 | MS.gene44324:CDS | 60.0% | |
| TCGATCCTTCCCTGGAGGCA+AGG | + | chr5.4:23572717-23572736 | MS.gene44324:CDS | 60.0% | |
| TGCGGCCTTTGATGTCGAGG+AGG | - | chr5.4:23569521-23569540 | None:intergenic | 60.0% | |
| ! | GCCCCCACGAGGTGTTCTTT+AGG | + | chr5.4:23571675-23571694 | MS.gene44324:intron | 60.0% |
| CTCGTCTGGCGTGACTACCG+CGG | + | chr5.4:23569543-23569562 | MS.gene44324:CDS | 65.0% | |
| CGCGGTAGTCACGCCAGACG+AGG | - | chr5.4:23569545-23569564 | None:intergenic | 70.0% | |
| !! | CGATGGCGGAGACGTCGCCG+CGG | - | chr5.4:23569563-23569582 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 23569492 | 23574350 | 23569492 | ID=MS.gene44324 |
| chr5.4 | mRNA | 23569492 | 23574350 | 23569492 | ID=MS.gene44324.t1;Parent=MS.gene44324 |
| chr5.4 | exon | 23569492 | 23569620 | 23569492 | ID=MS.gene44324.t1.exon1;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23569492 | 23569620 | 23569492 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| chr5.4 | exon | 23569720 | 23569866 | 23569720 | ID=MS.gene44324.t1.exon2;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23569720 | 23569866 | 23569720 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| chr5.4 | exon | 23569971 | 23570033 | 23569971 | ID=MS.gene44324.t1.exon3;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23569971 | 23570033 | 23569971 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| chr5.4 | exon | 23570284 | 23570460 | 23570284 | ID=MS.gene44324.t1.exon4;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23570284 | 23570460 | 23570284 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| chr5.4 | exon | 23570556 | 23570659 | 23570556 | ID=MS.gene44324.t1.exon5;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23570556 | 23570659 | 23570556 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| chr5.4 | exon | 23571883 | 23571990 | 23571883 | ID=MS.gene44324.t1.exon6;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23571883 | 23571990 | 23571883 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| chr5.4 | exon | 23572119 | 23572215 | 23572119 | ID=MS.gene44324.t1.exon7;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23572119 | 23572215 | 23572119 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| chr5.4 | exon | 23572335 | 23572432 | 23572335 | ID=MS.gene44324.t1.exon8;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23572335 | 23572432 | 23572335 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| chr5.4 | exon | 23572597 | 23572738 | 23572597 | ID=MS.gene44324.t1.exon9;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23572597 | 23572738 | 23572597 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| chr5.4 | exon | 23572840 | 23572962 | 23572840 | ID=MS.gene44324.t1.exon10;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23572840 | 23572962 | 23572840 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| chr5.4 | exon | 23574252 | 23574350 | 23574252 | ID=MS.gene44324.t1.exon11;Parent=MS.gene44324.t1 |
| chr5.4 | CDS | 23574252 | 23574350 | 23574252 | ID=cds.MS.gene44324.t1;Parent=MS.gene44324.t1 |
| Gene Sequence |
| Protein sequence |
