Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008864.t1 | XP_013446148.1 | 99.8 | 428 | 1 | 0 | 1 | 428 | 1 | 428 | 4.30E-222 | 780.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008864.t1 | O22715 | 83.9 | 428 | 69 | 0 | 1 | 428 | 1 | 428 | 4.2e-210 | 731.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008864.t1 | A0A072U2Y3 | 99.8 | 428 | 1 | 0 | 1 | 428 | 1 | 428 | 3.1e-222 | 780.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene052309 | MS.gene008864 | PPI |
| MS.gene015312 | MS.gene008864 | PPI |
| MS.gene072572 | MS.gene008864 | PPI |
| MS.gene003372 | MS.gene008864 | PPI |
| MS.gene031829 | MS.gene008864 | PPI |
| MS.gene008864 | MS.gene054375 | PPI |
| MS.gene75781 | MS.gene008864 | PPI |
| MS.gene059672 | MS.gene008864 | PPI |
| MS.gene09656 | MS.gene008864 | PPI |
| MS.gene050001 | MS.gene008864 | PPI |
| MS.gene050768 | MS.gene008864 | PPI |
| MS.gene28922 | MS.gene008864 | PPI |
| MS.gene050771 | MS.gene008864 | PPI |
| MS.gene021005 | MS.gene008864 | PPI |
| MS.gene008864 | MS.gene010105 | PPI |
| MS.gene017498 | MS.gene008864 | PPI |
| MS.gene21470 | MS.gene008864 | PPI |
| MS.gene23142 | MS.gene008864 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008864.t1 | MTR_8g069565 | 99.766 | 428 | 1 | 0 | 1 | 428 | 1 | 428 | 0.0 | 885 |
| MS.gene008864.t1 | MTR_5g033500 | 94.159 | 428 | 25 | 0 | 1 | 428 | 1 | 428 | 0.0 | 850 |
| MS.gene008864.t1 | MTR_5g033500 | 92.834 | 307 | 22 | 0 | 1 | 307 | 1 | 307 | 0.0 | 606 |
| MS.gene008864.t1 | MTR_5g014330 | 44.091 | 440 | 229 | 7 | 1 | 426 | 1 | 437 | 2.75e-125 | 370 |
| MS.gene008864.t1 | MTR_5g014330 | 42.184 | 403 | 216 | 7 | 1 | 389 | 1 | 400 | 8.97e-105 | 317 |
| MS.gene008864.t1 | MTR_3g112190 | 34.086 | 443 | 268 | 8 | 6 | 427 | 3 | 442 | 7.79e-84 | 264 |
| MS.gene008864.t1 | MTR_5g066050 | 34.141 | 454 | 262 | 10 | 6 | 427 | 3 | 451 | 6.85e-82 | 259 |
| MS.gene008864.t1 | MTR_5g066050 | 34.216 | 453 | 262 | 10 | 6 | 427 | 3 | 450 | 8.90e-82 | 259 |
| MS.gene008864.t1 | MTR_7g111870 | 26.424 | 439 | 272 | 12 | 7 | 426 | 4 | 410 | 1.28e-45 | 163 |
| MS.gene008864.t1 | MTR_7g111870 | 27.385 | 325 | 204 | 6 | 7 | 318 | 4 | 309 | 3.46e-42 | 152 |
| MS.gene008864.t1 | MTR_3g452810 | 72.727 | 66 | 17 | 1 | 49 | 113 | 19 | 84 | 2.08e-24 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008864.t1 | AT1G60780 | 90.187 | 428 | 42 | 0 | 1 | 428 | 1 | 428 | 0.0 | 828 |
| MS.gene008864.t1 | AT1G10730 | 86.916 | 428 | 56 | 0 | 1 | 428 | 1 | 428 | 0.0 | 791 |
| MS.gene008864.t1 | AT5G46630 | 43.864 | 440 | 230 | 5 | 1 | 426 | 1 | 437 | 2.44e-129 | 380 |
| MS.gene008864.t1 | AT5G46630 | 42.548 | 416 | 222 | 5 | 1 | 402 | 1 | 413 | 3.68e-116 | 347 |
| MS.gene008864.t1 | AT4G24550 | 32.308 | 455 | 268 | 8 | 6 | 427 | 4 | 451 | 1.98e-83 | 263 |
| MS.gene008864.t1 | AT4G24550 | 32.203 | 354 | 216 | 4 | 6 | 336 | 4 | 356 | 2.22e-66 | 217 |
| MS.gene008864.t1 | AT4G24550 | 32.203 | 354 | 216 | 4 | 6 | 336 | 4 | 356 | 3.04e-66 | 216 |
| MS.gene008864.t1 | AT1G56590 | 26.591 | 440 | 276 | 11 | 7 | 427 | 4 | 415 | 1.35e-45 | 163 |
Find 92 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAGGTTAAGCCTTTATTT+TGG | 0.194447 | 8.1:-35471216 | MS.gene008864:intron |
| GAATCTTCGCCTCGGTATAT+TGG | 0.238232 | 8.1:+35473787 | None:intergenic |
| AAAAGCTAGGAGTCAATTTA+AGG | 0.269172 | 8.1:-35471143 | MS.gene008864:CDS |
| CCCATTGATGTCCGCACATT+TGG | 0.273339 | 8.1:+35470888 | None:intergenic |
| AATCTTCGCCTCGGTATATT+GGG | 0.287297 | 8.1:+35473788 | None:intergenic |
| AATTGGAAGAGGAATCTCTT+AGG | 0.291550 | 8.1:-35473955 | MS.gene008864:CDS |
| TGCTTCCTCGTCTGTTATGC+TGG | 0.298393 | 8.1:+35470658 | None:intergenic |
| TGTGCTTCCACCCAAAATAA+AGG | 0.331488 | 8.1:+35471205 | None:intergenic |
| TATTGAGAAAAGTGGGTATC+AGG | 0.341880 | 8.1:-35470047 | MS.gene008864:CDS |
| TTGAAGATTATTGAGAAAAG+TGG | 0.347409 | 8.1:-35470055 | MS.gene008864:CDS |
| TGAACTACTTGATGAAATAA+TGG | 0.363893 | 8.1:-35473823 | MS.gene008864:CDS |
| TAATTAGGTCTGATGTTGTT+GGG | 0.372995 | 8.1:-35473510 | MS.gene008864:CDS |
| ATAGCAATGGGCAAATAATT+AGG | 0.375714 | 8.1:-35473525 | MS.gene008864:CDS |
| TTGTTCGATCATTCTCAAAT+CGG | 0.376459 | 8.1:+35471390 | None:intergenic |
| CAGATTAATGCATCTTTCTC+AGG | 0.379501 | 8.1:+35470849 | None:intergenic |
| TCAAAGGCCGCGTTCTCATT+TGG | 0.383267 | 8.1:-35474774 | MS.gene008864:CDS |
| CTGAGAAAGATGCATTAATC+TGG | 0.386776 | 8.1:-35470848 | MS.gene008864:CDS |
| TGACCCATCAGGTGGGATAA+AGG | 0.393185 | 8.1:+35471364 | None:intergenic |
| ATTCCGGACACAGTAAAATA+TGG | 0.394093 | 8.1:+35470593 | None:intergenic |
| AAATGACAGAATATTATTAG+AGG | 0.397899 | 8.1:-35471626 | MS.gene008864:CDS |
| GATCCAGTTGTATATGATAA+TGG | 0.403071 | 8.1:-35474215 | MS.gene008864:CDS |
| ACCATCAGGAGTACATGTTA+AGG | 0.405160 | 8.1:-35470697 | MS.gene008864:intron |
| CGATTCGATGTAGGAAGAAA+AGG | 0.415593 | 8.1:+35474114 | None:intergenic |
| CTTGATGAAATAATGGACTT+TGG | 0.418430 | 8.1:-35473816 | MS.gene008864:CDS |
| CCAAATGTGCGGACATCAAT+GGG | 0.434521 | 8.1:-35470888 | MS.gene008864:CDS |
| TGAAGATGAGAACATATTTG+AGG | 0.450190 | 8.1:-35473483 | MS.gene008864:intron |
| TTTGGAGTGGTTGCATCAGC+AGG | 0.457237 | 8.1:+35470906 | None:intergenic |
| TCCAAATGTGCGGACATCAA+TGG | 0.462969 | 8.1:-35470889 | MS.gene008864:CDS |
| TGTTCGATCATTCTCAAATC+GGG | 0.468696 | 8.1:+35471391 | None:intergenic |
| CCATCAGGAGTACATGTTAA+GGG | 0.470922 | 8.1:-35470696 | MS.gene008864:intron |
| ACACCATTATCATATACAAC+TGG | 0.471229 | 8.1:+35474212 | None:intergenic |
| TAGGGATAACTTTGTTGTTG+TGG | 0.472156 | 8.1:-35473936 | MS.gene008864:intron |
| CAAGACAGATGCTTATAGAA+TGG | 0.474086 | 8.1:-35473751 | MS.gene008864:CDS |
| TGAAGATTATTGAGAAAAGT+GGG | 0.477745 | 8.1:-35470054 | MS.gene008864:CDS |
| CGGAATCACTCTCCAATGTC+AGG | 0.478337 | 8.1:-35474826 | None:intergenic |
| AACATACTTGTCAATAGCAA+TGG | 0.485760 | 8.1:-35473538 | MS.gene008864:CDS |
| CACCAAGCTCATCGAGAAAG+AGG | 0.487657 | 8.1:-35474704 | MS.gene008864:intron |
| ATTAAGAAATACCTGTATTC+CGG | 0.487708 | 8.1:+35470577 | None:intergenic |
| AACCTCTTTCTCGATGAGCT+TGG | 0.491443 | 8.1:+35474702 | None:intergenic |
| ATTGGAAGAGGAATCTCTTA+GGG | 0.498057 | 8.1:-35473954 | MS.gene008864:CDS |
| ATCTCAAACTTTACACGTAT+AGG | 0.499585 | 8.1:+35470617 | None:intergenic |
| GGGAAAAGCGATTGACTTGG+AGG | 0.500831 | 8.1:-35471584 | MS.gene008864:CDS |
| GCAGAGGCTGCACCTGACAT+TGG | 0.508341 | 8.1:+35474814 | None:intergenic |
| ATAATTAGGTCTGATGTTGT+TGG | 0.509969 | 8.1:-35473511 | MS.gene008864:CDS |
| ATCAAATCAAATGACCCATC+AGG | 0.513153 | 8.1:+35471353 | None:intergenic |
| ACATACTTGTCAATAGCAAT+GGG | 0.514301 | 8.1:-35473537 | MS.gene008864:CDS |
| CAAGGGAAAAGCGATTGACT+TGG | 0.516810 | 8.1:-35471587 | MS.gene008864:CDS |
| GCAGGGAGATCAACAGTCTC+AGG | 0.519937 | 8.1:-35474237 | MS.gene008864:intron |
| GGCATGCCAGAGTGTAAACT+TGG | 0.520126 | 8.1:-35471652 | MS.gene008864:CDS |
| TCAATTAATACCTTGCCTCC+AGG | 0.520387 | 8.1:+35470810 | None:intergenic |
| TACAGCATTTGTTACAGCCA+TGG | 0.521446 | 8.1:+35473710 | None:intergenic |
| GGCACAAGGTAGAGCGACCA+AGG | 0.523950 | 8.1:-35471605 | MS.gene008864:CDS |
| ATTTCCTTTATCCCACCTGA+TGG | 0.531143 | 8.1:-35471368 | MS.gene008864:CDS |
| GCTGTATCTTGGCGTAGTGA+AGG | 0.533562 | 8.1:-35473693 | MS.gene008864:CDS |
| GTGGGTATCAGGCTCTTCCA+TGG | 0.534878 | 8.1:-35470036 | MS.gene008864:CDS |
| CTGTATCTTGGCGTAGTGAA+GGG | 0.543067 | 8.1:-35473692 | MS.gene008864:CDS |
| GTGAGATACATAACAATGGC+TGG | 0.544124 | 8.1:-35470013 | MS.gene008864:CDS |
| ACAGCATTTGTTACAGCCAT+GGG | 0.548624 | 8.1:+35473711 | None:intergenic |
| CTGTAACAAATGCTGTATCT+TGG | 0.552013 | 8.1:-35473704 | MS.gene008864:CDS |
| GCTTCCTCGTCTGTTATGCT+GGG | 0.552601 | 8.1:+35470659 | None:intergenic |
| TGGCTGGAGAGTATGAGTTA+AGG | 0.553729 | 8.1:-35469997 | MS.gene008864:CDS |
| TTGATGAAGGTGTGTGCGAT+TGG | 0.569907 | 8.1:-35471414 | MS.gene008864:intron |
| CTCATTTGGCGCGATTATCG+TGG | 0.571817 | 8.1:-35474760 | MS.gene008864:CDS |
| TTGAGATTACGGTAAAAGCT+AGG | 0.572472 | 8.1:-35471156 | MS.gene008864:CDS |
| GTGGTTGCATCAGCAGGCAC+AGG | 0.573449 | 8.1:+35470912 | None:intergenic |
| AATTAGGTCTGATGTTGTTG+GGG | 0.573919 | 8.1:-35473509 | MS.gene008864:CDS |
| TTTCCTTTATCCCACCTGAT+GGG | 0.574034 | 8.1:-35471367 | MS.gene008864:CDS |
| TTTGTCTAGTTGCTGTCATG+AGG | 0.575568 | 8.1:+35474156 | None:intergenic |
| CTCTTCCTTCTCGATATCAA+AGG | 0.575726 | 8.1:-35474790 | MS.gene008864:CDS |
| TGGGTATCAGGCTCTTCCAT+GGG | 0.587489 | 8.1:-35470035 | MS.gene008864:CDS |
| ATTGTTATGTATCTCACCCA+TGG | 0.591728 | 8.1:+35470019 | None:intergenic |
| TTTAAGCCAAGTTTACACTC+TGG | 0.595352 | 8.1:+35471646 | None:intergenic |
| GCACAAGGTAGAGCGACCAA+GGG | 0.598136 | 8.1:-35471604 | MS.gene008864:CDS |
| ATCTTCGCCTCGGTATATTG+GGG | 0.605383 | 8.1:+35473789 | None:intergenic |
| AAATCAAATGACCCATCAGG+TGG | 0.606484 | 8.1:+35471356 | None:intergenic |
| TTACATCAACGATTCGATGT+AGG | 0.611064 | 8.1:+35474105 | None:intergenic |
| CTCGCTAAGAATCTTCGCCT+CGG | 0.611887 | 8.1:+35473779 | None:intergenic |
| CGCGGCCTTTGATATCGAGA+AGG | 0.617009 | 8.1:+35474785 | None:intergenic |
| TGATGTCCGCACATTTGGAG+TGG | 0.623609 | 8.1:+35470893 | None:intergenic |
| GCATTTGTTACAGCCATGGG+AGG | 0.650662 | 8.1:+35473714 | None:intergenic |
| AGTTACACAGAGACCTCCCA+TGG | 0.655937 | 8.1:-35473727 | MS.gene008864:CDS |
| TCTTCGCCTCGGTATATTGG+GGG | 0.659624 | 8.1:+35473790 | None:intergenic |
| GAAGCGTTCAGCTTCAACAG+CGG | 0.665982 | 8.1:+35474729 | None:intergenic |
| GACATACAGACTCAGCACAC+AGG | 0.667857 | 8.1:-35471330 | MS.gene008864:intron |
| ATGCAACCACTCCAAATGTG+CGG | 0.670804 | 8.1:-35470899 | MS.gene008864:CDS |
| AATCAAATGACCCATCAGGT+GGG | 0.675073 | 8.1:+35471357 | None:intergenic |
| GGAGTCAATTTAAGGAACGT+AGG | 0.677567 | 8.1:-35471135 | MS.gene008864:intron |
| ATCGAGAAGGAAGAGAGCAG+AGG | 0.685565 | 8.1:+35474798 | None:intergenic |
| ATGGGTGAGATACATAACAA+TGG | 0.702359 | 8.1:-35470017 | MS.gene008864:CDS |
| TCTTCCCAGCATAACAGACG+AGG | 0.716182 | 8.1:-35470663 | MS.gene008864:CDS |
| AGAATATTATTAGAGGCACA+AGG | 0.724642 | 8.1:-35471619 | MS.gene008864:CDS |
| AATCGCGCCAAATGAGAACG+CGG | 0.730670 | 8.1:+35474767 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATATTGTTTTGATTTAT+AGG | - | chr8.1:35474713-35474732 | MS.gene008864:CDS | 10.0% |
| !!! | ATTTTCATTAAATAAATCAA+AGG | + | chr8.1:35474682-35474701 | None:intergenic | 10.0% |
| !! | AAATACAGATTTGTATAATA+TGG | - | chr8.1:35472286-35472305 | MS.gene008864:intron | 15.0% |
| !! | AATACAGATTTGTATAATAT+GGG | - | chr8.1:35472287-35472306 | MS.gene008864:intron | 15.0% |
| !! | ATAAATAGATATATGAAGAA+TGG | - | chr8.1:35472374-35472393 | MS.gene008864:intron | 15.0% |
| !! | TAGATAGTAAATTCTTAAAT+TGG | - | chr8.1:35474439-35474458 | MS.gene008864:intron | 15.0% |
| !!! | AACTTTTTCTCAAATTATTA+CGG | - | chr8.1:35470292-35470311 | MS.gene008864:intron | 15.0% |
| !!! | ATTGAGTAACTAAATTATTT+TGG | + | chr8.1:35471455-35471474 | None:intergenic | 15.0% |
| !!! | TATTTTATAAGAAGAAACTA+GGG | + | chr8.1:35472271-35472290 | None:intergenic | 15.0% |
| !!! | TGTAAATTATAAAGTACTTT+GGG | + | chr8.1:35472147-35472166 | None:intergenic | 15.0% |
| !!! | TGTATTTCTAATATGATTTA+AGG | + | chr8.1:35472508-35472527 | None:intergenic | 15.0% |
| !! | AAAAAACATGACATCATAAT+TGG | - | chr8.1:35474483-35474502 | MS.gene008864:intron | 20.0% |
| !! | AAAAATGGTTATTATAGAAG+GGG | - | chr8.1:35472538-35472557 | MS.gene008864:intron | 20.0% |
| !! | AAAAGCTTAGAACAATTTAT+AGG | + | chr8.1:35471813-35471832 | None:intergenic | 20.0% |
| !! | AAATATCATATGATCAACAA+TGG | + | chr8.1:35473560-35473579 | None:intergenic | 20.0% |
| !! | AAATGACAGAATATTATTAG+AGG | - | chr8.1:35473173-35473192 | MS.gene008864:intron | 20.0% |
| !! | AAGAATTTAAGTATGGTAAA+AGG | - | chr8.1:35472943-35472962 | MS.gene008864:intron | 20.0% |
| !! | AAGATACATAATACTAGAAA+TGG | + | chr8.1:35474288-35474307 | None:intergenic | 20.0% |
| !! | AATTATGGTTCAAATTTGAA+TGG | - | chr8.1:35470181-35470200 | MS.gene008864:intron | 20.0% |
| !! | AATTTAGTTACTCAATTTCA+AGG | - | chr8.1:35471459-35471478 | MS.gene008864:intron | 20.0% |
| !! | ACAAAAATGGTTATTATAGA+AGG | - | chr8.1:35472536-35472555 | MS.gene008864:intron | 20.0% |
| !! | AGAATTTAAGTATGGTAAAA+GGG | - | chr8.1:35472944-35472963 | MS.gene008864:intron | 20.0% |
| !! | AGATACATAATACTAGAAAT+GGG | + | chr8.1:35474287-35474306 | None:intergenic | 20.0% |
| !! | ATACAGATTTGTATAATATG+GGG | - | chr8.1:35472288-35472307 | MS.gene008864:intron | 20.0% |
| !! | ATCATATGATATTTATTTCC+AGG | - | chr8.1:35473566-35473585 | MS.gene008864:CDS | 20.0% |
| !! | CAAAAATGGTTATTATAGAA+GGG | - | chr8.1:35472537-35472556 | MS.gene008864:intron | 20.0% |
| !! | GGATTTATTTGTAGTTTATT+TGG | - | chr8.1:35471729-35471748 | MS.gene008864:intron | 20.0% |
| !! | TAAGTATGGTAAAATAGTTA+AGG | - | chr8.1:35472335-35472354 | MS.gene008864:intron | 20.0% |
| !! | TATATAATAGAATTCAAGCT+GGG | + | chr8.1:35471980-35471999 | None:intergenic | 20.0% |
| !! | TGCAATAATTAATGATTGAT+TGG | - | chr8.1:35470783-35470802 | MS.gene008864:intron | 20.0% |
| !! | TTAGACTAGAAATACTTTAT+CGG | + | chr8.1:35472695-35472714 | None:intergenic | 20.0% |
| !!! | AAAATTGTATATTAGTTTGC+TGG | - | chr8.1:35470756-35470775 | MS.gene008864:intron | 20.0% |
| !!! | ATACATTTTTCGAACAAAAA+TGG | - | chr8.1:35472523-35472542 | MS.gene008864:intron | 20.0% |
| !!! | CATTTAGATATGTGATTTTA+TGG | - | chr8.1:35471178-35471197 | MS.gene008864:CDS | 20.0% |
| !!! | CTAGTAATATGAATTTTACA+AGG | - | chr8.1:35474566-35474585 | MS.gene008864:intron | 20.0% |
| !!! | GATTTTAACATTATATGATG+TGG | + | chr8.1:35474615-35474634 | None:intergenic | 20.0% |
| !!! | GTAAATTATAAAGTACTTTG+GGG | + | chr8.1:35472146-35472165 | None:intergenic | 20.0% |
| !!! | GTATTTTATAAGAAGAAACT+AGG | + | chr8.1:35472272-35472291 | None:intergenic | 20.0% |
| !!! | GTGTAAATTATAAAGTACTT+TGG | + | chr8.1:35472148-35472167 | None:intergenic | 20.0% |
| !!! | GTTTTGTAAGAATTTAAGTA+TGG | - | chr8.1:35472936-35472955 | MS.gene008864:intron | 20.0% |
| !!! | GTTTTGTTAGAATATAAGTA+TGG | - | chr8.1:35472321-35472340 | MS.gene008864:intron | 20.0% |
| !!! | TTTTTCAGTGTTATGTTTTT+GGG | - | chr8.1:35470507-35470526 | MS.gene008864:intron | 20.0% |
| !!! | TTTTTTCAGTGTTATGTTTT+TGG | - | chr8.1:35470506-35470525 | MS.gene008864:intron | 20.0% |
| ! | AAACAAAATCCATTAGTTAG+TGG | + | chr8.1:35471210-35471229 | None:intergenic | 25.0% |
| ! | AAAGGATAATACAATATGTG+TGG | + | chr8.1:35474646-35474665 | None:intergenic | 25.0% |
| ! | AACTACTTACCTTGAATTTA+TGG | - | chr8.1:35473753-35473772 | MS.gene008864:CDS | 25.0% |
| ! | AATTCAATGTAATCACATGT+CGG | + | chr8.1:35470268-35470287 | None:intergenic | 25.0% |
| ! | AATTGGAAGATAAATACTGA+TGG | - | chr8.1:35474456-35474475 | MS.gene008864:intron | 25.0% |
| ! | ATACATCTTCACGTTTATAA+TGG | + | chr8.1:35471158-35471177 | None:intergenic | 25.0% |
| ! | ATATAATAGAATTCAAGCTG+GGG | + | chr8.1:35471979-35471998 | None:intergenic | 25.0% |
| ! | ATATATTATCCCTCTCATTT+CGG | + | chr8.1:35472734-35472753 | None:intergenic | 25.0% |
| ! | ATCAAAAAAATGGAAAGTAG+AGG | + | chr8.1:35472009-35472028 | None:intergenic | 25.0% |
| ! | ATGAAATGAAGGAATGAATT+GGG | + | chr8.1:35471955-35471974 | None:intergenic | 25.0% |
| ! | ATTAAGAAATACCTGTATTC+CGG | + | chr8.1:35474225-35474244 | None:intergenic | 25.0% |
| ! | ATTGGAAGATAAATACTGAT+GGG | - | chr8.1:35474457-35474476 | MS.gene008864:intron | 25.0% |
| ! | CAAAAGTCTCATCAAAAAAA+TGG | + | chr8.1:35472019-35472038 | None:intergenic | 25.0% |
| ! | GAAGAAAGAAATGAGAATTA+AGG | + | chr8.1:35470132-35470151 | None:intergenic | 25.0% |
| ! | GTATATAATAGAATTCAAGC+TGG | + | chr8.1:35471981-35472000 | None:intergenic | 25.0% |
| ! | GTGTTTAGAAGTTTATAAGA+CGG | + | chr8.1:35471888-35471907 | None:intergenic | 25.0% |
| ! | TACTTTATAATTTACACTCC+TGG | - | chr8.1:35472151-35472170 | MS.gene008864:intron | 25.0% |
| ! | TATGATACATTCTGTTTGAT+TGG | - | chr8.1:35473507-35473526 | MS.gene008864:CDS | 25.0% |
| ! | TGAACTACTTGATGAAATAA+TGG | - | chr8.1:35470976-35470995 | MS.gene008864:intron | 25.0% |
| ! | TGAAGATTATTGAGAAAAGT+GGG | - | chr8.1:35474745-35474764 | MS.gene008864:CDS | 25.0% |
| ! | TGCTTTCAATTAATTCATGT+CGG | + | chr8.1:35470382-35470401 | None:intergenic | 25.0% |
| ! | TGTTTAGAAGTTTATAAGAC+GGG | + | chr8.1:35471887-35471906 | None:intergenic | 25.0% |
| ! | TTCAAGTCAAGTAGAATAAT+GGG | + | chr8.1:35471643-35471662 | None:intergenic | 25.0% |
| ! | TTCTTATTGTAATTCTTTGC+TGG | + | chr8.1:35472617-35472636 | None:intergenic | 25.0% |
| ! | TTGAAGATTATTGAGAAAAG+TGG | - | chr8.1:35474744-35474763 | MS.gene008864:CDS | 25.0% |
| !! | AATTGAGAAATTTTCGATTG+CGG | - | chr8.1:35470473-35470492 | MS.gene008864:intron | 25.0% |
| !! | TTAGTAATATGACTTGCATA+GGG | - | chr8.1:35471409-35471428 | MS.gene008864:intron | 25.0% |
| !! | TTTAGTAATATGACTTGCAT+AGG | - | chr8.1:35471408-35471427 | MS.gene008864:CDS | 25.0% |
| !!! | AACTAATGGATTTTGTTTTC+AGG | - | chr8.1:35471212-35471231 | MS.gene008864:CDS | 25.0% |
| !!! | ATTTTGTTTTCAGGTTTTCT+TGG | - | chr8.1:35471221-35471240 | MS.gene008864:intron | 25.0% |
| !!! | TGTTACTTTTGTGCTAATTA+TGG | - | chr8.1:35470166-35470185 | MS.gene008864:intron | 25.0% |
| !!! | TGTTTTTAGAAGCTATTCTA+AGG | + | chr8.1:35471848-35471867 | None:intergenic | 25.0% |
| !!! | TTGAAAAGCATTCAAAAAGT+CGG | - | chr8.1:35473619-35473638 | MS.gene008864:intron | 25.0% |
| !!! | TTTTTTGATGAGACTTTTGA+GGG | - | chr8.1:35472020-35472039 | MS.gene008864:intron | 25.0% |
| !!! | TTTTTTTGATGAGACTTTTG+AGG | - | chr8.1:35472019-35472038 | MS.gene008864:intron | 25.0% |
| AAAAAGTCGGATTGAGATTA+CGG | - | chr8.1:35473632-35473651 | MS.gene008864:intron | 30.0% | |
| AAAAGCTAGGAGTCAATTTA+AGG | - | chr8.1:35473656-35473675 | MS.gene008864:intron | 30.0% | |
| AAACTACAAGAAAAATGAGG+TGG | - | chr8.1:35471132-35471151 | MS.gene008864:intron | 30.0% | |
| AACATACTTGTCAATAGCAA+TGG | - | chr8.1:35471261-35471280 | MS.gene008864:intron | 30.0% | |
| AAGAAATGAGAATTAAGGTG+TGG | + | chr8.1:35470127-35470146 | None:intergenic | 30.0% | |
| ACACCATTATCATATACAAC+TGG | + | chr8.1:35470590-35470609 | None:intergenic | 30.0% | |
| ACAGAATGTATCATATCTAG+AGG | + | chr8.1:35473502-35473521 | None:intergenic | 30.0% | |
| ACATACTTGTCAATAGCAAT+GGG | - | chr8.1:35471262-35471281 | MS.gene008864:intron | 30.0% | |
| AGATATATGAAGAATGGATC+AGG | - | chr8.1:35472380-35472399 | MS.gene008864:intron | 30.0% | |
| AGGAAAAAGAAAAACTACTG+TGG | + | chr8.1:35472763-35472782 | None:intergenic | 30.0% | |
| AGGTTTCATAATTTCCAGTA+GGG | - | chr8.1:35471697-35471716 | MS.gene008864:intron | 30.0% | |
| ATAATTAGGTCTGATGTTGT+TGG | - | chr8.1:35471288-35471307 | MS.gene008864:intron | 30.0% | |
| ATAGCAATGGGCAAATAATT+AGG | - | chr8.1:35471274-35471293 | MS.gene008864:intron | 30.0% | |
| ATCTCAAACTTTACACGTAT+AGG | + | chr8.1:35474185-35474204 | None:intergenic | 30.0% | |
| ATGGAGAAGTAATTACATAC+GGG | + | chr8.1:35473810-35473829 | None:intergenic | 30.0% | |
| ATTTGTATAATATGGGGTCT+TGG | - | chr8.1:35472294-35472313 | MS.gene008864:intron | 30.0% | |
| CAAAACAAAACTGTTGATCA+CGG | + | chr8.1:35474542-35474561 | None:intergenic | 30.0% | |
| CAAGTCAATCCATAAATTCA+AGG | + | chr8.1:35473765-35473784 | None:intergenic | 30.0% | |
| CGATTGTGAAATAACGAATT+TGG | - | chr8.1:35474065-35474084 | MS.gene008864:intron | 30.0% | |
| CTTCAAGTCAAGTAGAATAA+TGG | + | chr8.1:35471644-35471663 | None:intergenic | 30.0% | |
| GAATTGGGTGTTAATTGTAA+GGG | + | chr8.1:35471940-35471959 | None:intergenic | 30.0% | |
| GAATTTCATGCTATTGAGAT+TGG | - | chr8.1:35471369-35471388 | MS.gene008864:CDS | 30.0% | |
| GACTTAAGATAGTAACATTC+TGG | - | chr8.1:35472181-35472200 | MS.gene008864:intron | 30.0% | |
| GATCCAGTTGTATATGATAA+TGG | - | chr8.1:35470584-35470603 | MS.gene008864:intron | 30.0% | |
| GATGAAATGAAGGAATGAAT+TGG | + | chr8.1:35471956-35471975 | None:intergenic | 30.0% | |
| GATGGAGAAGTAATTACATA+CGG | + | chr8.1:35473811-35473830 | None:intergenic | 30.0% | |
| GCTAAACTACAAGAAAAATG+AGG | - | chr8.1:35471129-35471148 | MS.gene008864:intron | 30.0% | |
| GTATTATCCTTTGTCAGTTA+AGG | - | chr8.1:35474654-35474673 | MS.gene008864:intron | 30.0% | |
| TAAGATAGTAACATTCTGGT+AGG | - | chr8.1:35472185-35472204 | MS.gene008864:intron | 30.0% | |
| TAAGTATGGTAAAAGGGTAA+AGG | - | chr8.1:35472950-35472969 | MS.gene008864:intron | 30.0% | |
| TAATTAGGTCTGATGTTGTT+GGG | - | chr8.1:35471289-35471308 | MS.gene008864:intron | 30.0% | |
| TAGGTTTCATAATTTCCAGT+AGG | - | chr8.1:35471696-35471715 | MS.gene008864:intron | 30.0% | |
| TATAATAGAATTCAAGCTGG+GGG | + | chr8.1:35471978-35471997 | None:intergenic | 30.0% | |
| TGAAGATGAGAACATATTTG+AGG | - | chr8.1:35471316-35471335 | MS.gene008864:intron | 30.0% | |
| TGAATTGGGTGTTAATTGTA+AGG | + | chr8.1:35471941-35471960 | None:intergenic | 30.0% | |
| TTATTATAGAAGGGGTAAAG+TGG | - | chr8.1:35472546-35472565 | MS.gene008864:intron | 30.0% | |
| TTCAACTCAAGATTTAAGCA+TGG | - | chr8.1:35472469-35472488 | MS.gene008864:intron | 30.0% | |
| TTGTTCGATCATTCTCAAAT+CGG | + | chr8.1:35473412-35473431 | None:intergenic | 30.0% | |
| TTTATAATTTACACTCCTGG+AGG | - | chr8.1:35472154-35472173 | MS.gene008864:intron | 30.0% | |
| TTTATGTGGTTGTGTTTAAG+TGG | + | chr8.1:35471578-35471597 | None:intergenic | 30.0% | |
| ! | AGAATATTATTAGAGGCACA+AGG | - | chr8.1:35473180-35473199 | MS.gene008864:intron | 30.0% |
| ! | AGATTGGCTACTAGTTATTT+GGG | - | chr8.1:35471385-35471404 | MS.gene008864:CDS | 30.0% |
| ! | AGCTTCTAAAAACAGCTTAT+AGG | - | chr8.1:35471854-35471873 | MS.gene008864:intron | 30.0% |
| ! | ATACCATATTTTACTGTGTC+CGG | - | chr8.1:35474203-35474222 | MS.gene008864:CDS | 30.0% |
| ! | CATTATTCTACTTGACTTGA+AGG | - | chr8.1:35471642-35471661 | MS.gene008864:CDS | 30.0% |
| ! | GCTTCTAAAAACAGCTTATA+GGG | - | chr8.1:35471855-35471874 | MS.gene008864:intron | 30.0% |
| ! | TCATTTTCATGTTTTCCATG+GGG | - | chr8.1:35474349-35474368 | MS.gene008864:intron | 30.0% |
| ! | TTCTCTTGTTTAATACCATC+AGG | - | chr8.1:35474088-35474107 | MS.gene008864:intron | 30.0% |
| ! | TTTGTGTTGATACTTGATGA+AGG | - | chr8.1:35473372-35473391 | MS.gene008864:intron | 30.0% |
| ! | TTTTTGATGAGACTTTTGAG+GGG | - | chr8.1:35472021-35472040 | MS.gene008864:intron | 30.0% |
| !! | CTTGATGAAATAATGGACTT+TGG | - | chr8.1:35470983-35471002 | MS.gene008864:intron | 30.0% |
| !! | GGTATTAATTGACTTGGAAA+TGG | - | chr8.1:35474000-35474019 | MS.gene008864:intron | 30.0% |
| !! | GGTTTTCAAGCATTATTTTG+AGG | - | chr8.1:35470821-35470840 | MS.gene008864:CDS | 30.0% |
| !! | GTCATTTTCATGTTTTCCAT+GGG | - | chr8.1:35474348-35474367 | MS.gene008864:intron | 30.0% |
| !!! | CAAGCATTATTTTGAGGAAT+TGG | - | chr8.1:35470827-35470846 | MS.gene008864:CDS | 30.0% |
| !!! | TGTCATTTTCATGTTTTCCA+TGG | - | chr8.1:35474347-35474366 | MS.gene008864:intron | 30.0% |
| !!! | TTATTTTGAGGAATTGGAAG+AGG | - | chr8.1:35470833-35470852 | MS.gene008864:CDS | 30.0% |
| AAGGAACGTAGGTACTAATA+TGG | - | chr8.1:35473675-35473694 | MS.gene008864:CDS | 35.0% | |
| AATGGGAAATCGCTTATCTT+TGG | + | chr8.1:35471626-35471645 | None:intergenic | 35.0% | |
| AATTAGGTCTGATGTTGTTG+GGG | - | chr8.1:35471290-35471309 | MS.gene008864:intron | 35.0% | |
| AATTGGAAGAGGAATCTCTT+AGG | - | chr8.1:35470844-35470863 | MS.gene008864:CDS | 35.0% | |
| ACACAACCACATAAAATCCT+TGG | - | chr8.1:35471583-35471602 | MS.gene008864:CDS | 35.0% | |
| AGTAGTTGTATCTTCCATGA+TGG | + | chr8.1:35473740-35473759 | None:intergenic | 35.0% | |
| ATCAAATCAAATGACCCATC+AGG | + | chr8.1:35473449-35473468 | None:intergenic | 35.0% | |
| ATGGGTGAGATACATAACAA+TGG | - | chr8.1:35474782-35474801 | MS.gene008864:CDS | 35.0% | |
| ATTCCGGACACAGTAAAATA+TGG | + | chr8.1:35474209-35474228 | None:intergenic | 35.0% | |
| ATTGGAAGAGGAATCTCTTA+GGG | - | chr8.1:35470845-35470864 | MS.gene008864:CDS | 35.0% | |
| ATTGTTATGTATCTCACCCA+TGG | + | chr8.1:35474783-35474802 | None:intergenic | 35.0% | |
| CAAGACAGATGCTTATAGAA+TGG | - | chr8.1:35471048-35471067 | MS.gene008864:intron | 35.0% | |
| CACAACCACATAAAATCCTT+GGG | - | chr8.1:35471584-35471603 | MS.gene008864:CDS | 35.0% | |
| CAGATTAATGCATCTTTCTC+AGG | + | chr8.1:35473953-35473972 | None:intergenic | 35.0% | |
| CTGAGAAAGATGCATTAATC+TGG | - | chr8.1:35473951-35473970 | MS.gene008864:CDS | 35.0% | |
| CTGTAACAAATGCTGTATCT+TGG | - | chr8.1:35471095-35471114 | MS.gene008864:intron | 35.0% | |
| CTGTATTACACAACAAGACA+TGG | + | chr8.1:35473126-35473145 | None:intergenic | 35.0% | |
| GACGATTTCCATAACAGTAT+AGG | + | chr8.1:35473000-35473019 | None:intergenic | 35.0% | |
| GATACATTCTGTTTGATTGG+TGG | - | chr8.1:35473510-35473529 | MS.gene008864:CDS | 35.0% | |
| GATTGATTGGTATGTGATTG+AGG | - | chr8.1:35470796-35470815 | MS.gene008864:intron | 35.0% | |
| GCATAATGCTCTGCAATATT+TGG | - | chr8.1:35472052-35472071 | MS.gene008864:intron | 35.0% | |
| TAAGAACGCATGATTTCATC+TGG | - | chr8.1:35470317-35470336 | MS.gene008864:intron | 35.0% | |
| TACTGTTATGGAAATCGTCT+AGG | - | chr8.1:35473001-35473020 | MS.gene008864:intron | 35.0% | |
| TATTGAGAAAAGTGGGTATC+AGG | - | chr8.1:35474752-35474771 | MS.gene008864:CDS | 35.0% | |
| TCTATTAACACTCAGTGAAC+TGG | + | chr8.1:35474423-35474442 | None:intergenic | 35.0% | |
| TGTTCGATCATTCTCAAATC+GGG | + | chr8.1:35473411-35473430 | None:intergenic | 35.0% | |
| TTACATCAACGATTCGATGT+AGG | + | chr8.1:35470697-35470716 | None:intergenic | 35.0% | |
| TTGAGATTACGGTAAAAGCT+AGG | - | chr8.1:35473643-35473662 | MS.gene008864:intron | 35.0% | |
| TTGTTGAAATAGCTCACACA+CGG | - | chr8.1:35471667-35471686 | MS.gene008864:intron | 35.0% | |
| TTTAAGCCAAGTTTACACTC+TGG | + | chr8.1:35473156-35473175 | None:intergenic | 35.0% | |
| ! | ACAAAATATTTTCAGCCCCA+TGG | + | chr8.1:35474367-35474386 | None:intergenic | 35.0% |
| ! | ACTTGCATAGGGTTTTTGTT+GGG | - | chr8.1:35471420-35471439 | MS.gene008864:intron | 35.0% |
| ! | ACTTTCCCAAGGATTTTATG+TGG | + | chr8.1:35471592-35471611 | None:intergenic | 35.0% |
| ! | AGGCAAGGTATTAATTGACT+TGG | - | chr8.1:35473994-35474013 | MS.gene008864:intron | 35.0% |
| ! | ATAATTTCCAGTAGGGTGTT+TGG | - | chr8.1:35471704-35471723 | MS.gene008864:intron | 35.0% |
| ! | ATCTTCCATGATGGAAAACA+GGG | + | chr8.1:35473731-35473750 | None:intergenic | 35.0% |
| ! | GAGATTGGCTACTAGTTATT+TGG | - | chr8.1:35471384-35471403 | MS.gene008864:CDS | 35.0% |
| ! | GTCGTTTAGATCAGAAGTAT+CGG | + | chr8.1:35470239-35470258 | None:intergenic | 35.0% |
| ! | GTTTTCTTGACAATAGGGAT+GGG | - | chr8.1:35472090-35472109 | MS.gene008864:intron | 35.0% |
| ! | TATCTTCCATGATGGAAAAC+AGG | + | chr8.1:35473732-35473751 | None:intergenic | 35.0% |
| ! | TGTCTTGTTGTGTAATACAG+TGG | - | chr8.1:35473126-35473145 | MS.gene008864:intron | 35.0% |
| !! | AAATGCTAAAAAGTGCCCTT+AGG | + | chr8.1:35471917-35471936 | None:intergenic | 35.0% |
| !! | AATGCTAAAAAGTGCCCTTA+GGG | + | chr8.1:35471916-35471935 | None:intergenic | 35.0% |
| !! | TAGGGATAACTTTGTTGTTG+TGG | - | chr8.1:35470863-35470882 | MS.gene008864:CDS | 35.0% |
| !! | TCAATCATGGGTGTTATTCA+TGG | + | chr8.1:35474036-35474055 | None:intergenic | 35.0% |
| !! | TCCAGGTTAAGCCTTTATTT+TGG | - | chr8.1:35473583-35473602 | MS.gene008864:intron | 35.0% |
| !! | TTCCTGCTTTATTTGTCTGT+TGG | - | chr8.1:35474315-35474334 | MS.gene008864:intron | 35.0% |
| !!! | AAGCTGGTTTTCTTGACAAT+AGG | - | chr8.1:35472084-35472103 | MS.gene008864:intron | 35.0% |
| !!! | AGCTGGTTTTCTTGACAATA+GGG | - | chr8.1:35472085-35472104 | MS.gene008864:intron | 35.0% |
| !!! | CCAGGTTAAGCCTTTATTTT+GGG | - | chr8.1:35473584-35473603 | MS.gene008864:intron | 35.0% |
| !!! | TGTTTTTGAAATTGTGCGCA+GGG | - | chr8.1:35470545-35470564 | MS.gene008864:intron | 35.0% |
| !!! | TTGTTTTTGAAATTGTGCGC+AGG | - | chr8.1:35470544-35470563 | MS.gene008864:intron | 35.0% |
| !!! | TTTTCAGGTTTTCTTGGATG+TGG | - | chr8.1:35471227-35471246 | MS.gene008864:intron | 35.0% |
| AAACCTGTACCGAAATGAGA+GGG | - | chr8.1:35472722-35472741 | MS.gene008864:intron | 40.0% | |
| AAAGAGATCATGAGGCTTCA+AGG | + | chr8.1:35471517-35471536 | None:intergenic | 40.0% | |
| AAAGGCTCCTTAACTGACAA+AGG | + | chr8.1:35474664-35474683 | None:intergenic | 40.0% | |
| AAATCAAATGACCCATCAGG+TGG | + | chr8.1:35473446-35473465 | None:intergenic | 40.0% | |
| AATCAAATGACCCATCAGGT+GGG | + | chr8.1:35473445-35473464 | None:intergenic | 40.0% | |
| AATCTTCGCCTCGGTATATT+GGG | + | chr8.1:35471014-35471033 | None:intergenic | 40.0% | |
| AATGCTCTGCAATATTTGGC+TGG | - | chr8.1:35472056-35472075 | MS.gene008864:intron | 40.0% | |
| AATTGCCACACCCACTTATT+CGG | - | chr8.1:35472786-35472805 | MS.gene008864:intron | 40.0% | |
| AATTTACACTCCTGGAGGTA+GGG | - | chr8.1:35472159-35472178 | MS.gene008864:intron | 40.0% | |
| ACAGTATAGGCTTACACCAA+TGG | + | chr8.1:35472987-35473006 | None:intergenic | 40.0% | |
| ACGCATGATTTCATCTGGAA+TGG | - | chr8.1:35470322-35470341 | MS.gene008864:intron | 40.0% | |
| AGAAGTAATTACATACGGGC+TGG | + | chr8.1:35473806-35473825 | None:intergenic | 40.0% | |
| AGCTATTCTCCTTGAGGATA+AGG | - | chr8.1:35472227-35472246 | MS.gene008864:intron | 40.0% | |
| ATCGACGTGAGTATCAATCA+TGG | + | chr8.1:35474049-35474068 | None:intergenic | 40.0% | |
| ATCGCTTATCTTTGGACCTT+CGG | + | chr8.1:35471618-35471637 | None:intergenic | 40.0% | |
| ATTTCCTTTATCCCACCTGA+TGG | - | chr8.1:35473431-35473450 | MS.gene008864:intron | 40.0% | |
| CAAAACTGTTGATCACGGAA+AGG | + | chr8.1:35474537-35474556 | None:intergenic | 40.0% | |
| CACCAACAGACAAATAAAGC+AGG | + | chr8.1:35474320-35474339 | None:intergenic | 40.0% | |
| CACTTGTTTCAACTGCTAGA+GGG | + | chr8.1:35472592-35472611 | None:intergenic | 40.0% | |
| CATGTGTTTGTGTAAGACAC+CGG | - | chr8.1:35470406-35470425 | MS.gene008864:intron | 40.0% | |
| CATTGTAGCACCTGTTTGTT+TGG | + | chr8.1:35472824-35472843 | None:intergenic | 40.0% | |
| CCCAAAATAAAGGCTTAACC+TGG | + | chr8.1:35473587-35473606 | None:intergenic | 40.0% | |
| CGACTAAAACAGTGAAGTAC+CGG | + | chr8.1:35472904-35472923 | None:intergenic | 40.0% | |
| CGATTCGATGTAGGAAGAAA+AGG | + | chr8.1:35470688-35470707 | None:intergenic | 40.0% | |
| CTATTCTCCTTGAGGATAAG+GGG | - | chr8.1:35472229-35472248 | MS.gene008864:intron | 40.0% | |
| CTCTTCCTTCTCGATATCAA+AGG | - | chr8.1:35470009-35470028 | MS.gene008864:CDS | 40.0% | |
| GCTATTCTCCTTGAGGATAA+GGG | - | chr8.1:35472228-35472247 | MS.gene008864:intron | 40.0% | |
| GCTGCATAGGTTAATAATGG+TGG | - | chr8.1:35470444-35470463 | MS.gene008864:intron | 40.0% | |
| GGAGTCAATTTAAGGAACGT+AGG | - | chr8.1:35473664-35473683 | MS.gene008864:intron | 40.0% | |
| GGTGTAAGCCTATACTGTTA+TGG | - | chr8.1:35472989-35473008 | MS.gene008864:intron | 40.0% | |
| GTGAGATACATAACAATGGC+TGG | - | chr8.1:35474786-35474805 | MS.gene008864:CDS | 40.0% | |
| TAATTTACACTCCTGGAGGT+AGG | - | chr8.1:35472158-35472177 | MS.gene008864:intron | 40.0% | |
| TATCCTCAAGGAGAATAGCT+TGG | + | chr8.1:35472227-35472246 | None:intergenic | 40.0% | |
| TATCGGATGTGTTTCAACTC+TGG | + | chr8.1:35472678-35472697 | None:intergenic | 40.0% | |
| TATGAAGAATGGATCAGGCT+TGG | - | chr8.1:35472385-35472404 | MS.gene008864:intron | 40.0% | |
| TCAAGTAGTTCATACTGCCA+AGG | + | chr8.1:35470968-35470987 | None:intergenic | 40.0% | |
| TCAATTAATACCTTGCCTCC+AGG | + | chr8.1:35473992-35474011 | None:intergenic | 40.0% | |
| TCGACGTGAGTATCAATCAT+GGG | + | chr8.1:35474048-35474067 | None:intergenic | 40.0% | |
| TCTAAACACAAGTGCCCTAA+GGG | - | chr8.1:35471899-35471918 | MS.gene008864:intron | 40.0% | |
| TCTTCCAGTGATAACACAGT+GGG | + | chr8.1:35473028-35473047 | None:intergenic | 40.0% | |
| TGGTCTAAGCCACTAACTAA+TGG | - | chr8.1:35471198-35471217 | MS.gene008864:CDS | 40.0% | |
| TGTGCTTCCACCCAAAATAA+AGG | + | chr8.1:35473597-35473616 | None:intergenic | 40.0% | |
| TGTTGAAATAGCTCACACAC+GGG | - | chr8.1:35471668-35471687 | MS.gene008864:intron | 40.0% | |
| TTCTAAACACAAGTGCCCTA+AGG | - | chr8.1:35471898-35471917 | MS.gene008864:intron | 40.0% | |
| TTTCCTTTATCCCACCTGAT+GGG | - | chr8.1:35473432-35473451 | MS.gene008864:intron | 40.0% | |
| TTTGTCTAGTTGCTGTCATG+AGG | + | chr8.1:35470646-35470665 | None:intergenic | 40.0% | |
| ! | ACAGCATTTGTTACAGCCAT+GGG | + | chr8.1:35471091-35471110 | None:intergenic | 40.0% |
| ! | ACCATCAGGAGTACATGTTA+AGG | - | chr8.1:35474102-35474121 | MS.gene008864:intron | 40.0% |
| ! | ACGTATAGGAGCTTTTCTCT+CGG | + | chr8.1:35474171-35474190 | None:intergenic | 40.0% |
| ! | ATAGGGATGGGACTTTTGTA+TGG | - | chr8.1:35472102-35472121 | MS.gene008864:intron | 40.0% |
| ! | CAAACAAACAGGTGCTACAA+TGG | - | chr8.1:35472822-35472841 | MS.gene008864:intron | 40.0% |
| ! | CCATCAGGAGTACATGTTAA+GGG | - | chr8.1:35474103-35474122 | MS.gene008864:intron | 40.0% |
| ! | CTTGCATAGGGTTTTTGTTG+GGG | - | chr8.1:35471421-35471440 | MS.gene008864:intron | 40.0% |
| ! | GACTTGCATAGGGTTTTTGT+TGG | - | chr8.1:35471419-35471438 | MS.gene008864:intron | 40.0% |
| ! | GGTGCTGCATAGGTTAATAA+TGG | - | chr8.1:35470441-35470460 | MS.gene008864:intron | 40.0% |
| ! | GGTTTTCTTGACAATAGGGA+TGG | - | chr8.1:35472089-35472108 | MS.gene008864:intron | 40.0% |
| ! | TACAGCATTTGTTACAGCCA+TGG | + | chr8.1:35471092-35471111 | None:intergenic | 40.0% |
| ! | TCTTCCATGATGGAAAACAG+GGG | + | chr8.1:35473730-35473749 | None:intergenic | 40.0% |
| ! | TTTTACTGTGTCCGGAATAC+AGG | - | chr8.1:35474211-35474230 | MS.gene008864:CDS | 40.0% |
| !! | ATGAGACTTTTGAGGGGAAT+TGG | - | chr8.1:35472027-35472046 | MS.gene008864:intron | 40.0% |
| !! | TATTTGGCTGGTTTACAAGC+TGG | - | chr8.1:35472068-35472087 | MS.gene008864:intron | 40.0% |
| !!! | CGGTACTTCACTGTTTTAGT+CGG | - | chr8.1:35472902-35472921 | MS.gene008864:intron | 40.0% |
| !!! | GGTACTTCACTGTTTTAGTC+GGG | - | chr8.1:35472903-35472922 | MS.gene008864:intron | 40.0% |
| !!! | GGTTAAGCCTTTATTTTGGG+TGG | - | chr8.1:35473587-35473606 | MS.gene008864:intron | 40.0% |
| AAAGGCTCAAGGTTCACCAT+TGG | - | chr8.1:35472968-35472987 | MS.gene008864:intron | 45.0% | |
| AACCTCTTTCTCGATGAGCT+TGG | + | chr8.1:35470100-35470119 | None:intergenic | 45.0% | |
| AAGTACGCTGCCGAATAAGT+GGG | + | chr8.1:35472799-35472818 | None:intergenic | 45.0% | |
| AATCCTTCCAAACACCCTAC+TGG | + | chr8.1:35471714-35471733 | None:intergenic | 45.0% | |
| ACGCTGAATTCTTCTGTCCT+TGG | - | chr8.1:35470948-35470967 | MS.gene008864:intron | 45.0% | |
| ATCTTCGCCTCGGTATATTG+GGG | + | chr8.1:35471013-35471032 | None:intergenic | 45.0% | |
| ATGCAACCACTCCAAATGTG+CGG | - | chr8.1:35473900-35473919 | MS.gene008864:intron | 45.0% | |
| ATGTGTTTCAACTCTGGCAG+TGG | + | chr8.1:35472672-35472691 | None:intergenic | 45.0% | |
| ATTGAGGGCTGATAGATGCA+TGG | + | chr8.1:35472865-35472884 | None:intergenic | 45.0% | |
| CAAACCTGTACCGAAATGAG+AGG | - | chr8.1:35472721-35472740 | MS.gene008864:intron | 45.0% | |
| CAAGGGAAAAGCGATTGACT+TGG | - | chr8.1:35473212-35473231 | MS.gene008864:intron | 45.0% | |
| CCAAATGTGCGGACATCAAT+GGG | - | chr8.1:35473911-35473930 | MS.gene008864:intron | 45.0% | |
| CCCTTAACATGTACTCCTGA+TGG | + | chr8.1:35474106-35474125 | None:intergenic | 45.0% | |
| CTGTATCTTGGCGTAGTGAA+GGG | - | chr8.1:35471107-35471126 | MS.gene008864:intron | 45.0% | |
| GAATCTTCGCCTCGGTATAT+TGG | + | chr8.1:35471015-35471034 | None:intergenic | 45.0% | |
| GAGCTCGAAAAGAGATCATG+AGG | + | chr8.1:35471525-35471544 | None:intergenic | 45.0% | |
| GATTGGTATGTGATTGAGGC+AGG | - | chr8.1:35470800-35470819 | MS.gene008864:intron | 45.0% | |
| GCACTTGTTTCAACTGCTAG+AGG | + | chr8.1:35472593-35472612 | None:intergenic | 45.0% | |
| GGTAAAAGGGTAAAGGCTCA+AGG | - | chr8.1:35472957-35472976 | MS.gene008864:intron | 45.0% | |
| GTATGGAACTGCCAGCATAA+AGG | - | chr8.1:35472119-35472138 | MS.gene008864:intron | 45.0% | |
| GTCTTCCAGTGATAACACAG+TGG | + | chr8.1:35473029-35473048 | None:intergenic | 45.0% | |
| TATCCCTCTCATTTCGGTAC+AGG | + | chr8.1:35472728-35472747 | None:intergenic | 45.0% | |
| TATCTTAAGTCCCTACCTCC+AGG | + | chr8.1:35472172-35472191 | None:intergenic | 45.0% | |
| TCACATTCCCCTTATCCTCA+AGG | + | chr8.1:35472239-35472258 | None:intergenic | 45.0% | |
| TCCAAATGTGCGGACATCAA+TGG | - | chr8.1:35473910-35473929 | MS.gene008864:intron | 45.0% | |
| TGTCCAAGCTATTCTCCTTG+AGG | - | chr8.1:35472221-35472240 | MS.gene008864:intron | 45.0% | |
| TGTGTTTCAACTCTGGCAGT+GGG | + | chr8.1:35472671-35472690 | None:intergenic | 45.0% | |
| TTCAAGGACGTGTTTGAGCA+GGG | - | chr8.1:35471475-35471494 | MS.gene008864:intron | 45.0% | |
| TTTCAAGGACGTGTTTGAGC+AGG | - | chr8.1:35471474-35471493 | MS.gene008864:intron | 45.0% | |
| ! | AAGTGGGTGTGGCAATTTTG+AGG | + | chr8.1:35472783-35472802 | None:intergenic | 45.0% |
| ! | CGTATAGGAGCTTTTCTCTC+GGG | + | chr8.1:35474170-35474189 | None:intergenic | 45.0% |
| ! | GTTTCCCCTGTTTTCCATCA+TGG | - | chr8.1:35473723-35473742 | MS.gene008864:CDS | 45.0% |
| ! | TACTTTGGGGACCTTTATGC+TGG | + | chr8.1:35472133-35472152 | None:intergenic | 45.0% |
| ! | TCAGGTTTTCTTGGATGTGG+TGG | - | chr8.1:35471230-35471249 | MS.gene008864:intron | 45.0% |
| ! | TGGCTGGAGAGTATGAGTTA+AGG | - | chr8.1:35474802-35474821 | MS.gene008864:CDS | 45.0% |
| ! | TTGATGAAGGTGTGTGCGAT+TGG | - | chr8.1:35473385-35473404 | MS.gene008864:intron | 45.0% |
| ! | TTTCCAGTAGGGTGTTTGGA+AGG | - | chr8.1:35471708-35471727 | MS.gene008864:intron | 45.0% |
| !! | CAAGTCAATCGCTTTTCCCT+TGG | + | chr8.1:35473214-35473233 | None:intergenic | 45.0% |
| !!! | TCACTGTTTTAGTCGGGTCT+TGG | - | chr8.1:35472909-35472928 | MS.gene008864:intron | 45.0% |
| !! | AAATTATATTAATTAATAGA+TGG | + | chr8.1:35473829-35473848 | None:intergenic | 5.0% |
| AATACCTACCTGCCTGCTAC+CGG | - | chr8.1:35472882-35472901 | MS.gene008864:intron | 50.0% | |
| AATCGCGCCAAATGAGAACG+CGG | + | chr8.1:35470035-35470054 | None:intergenic | 50.0% | |
| ACCTTCGGAACACTTTCCCA+AGG | + | chr8.1:35471603-35471622 | None:intergenic | 50.0% | |
| AGACACCGGATATGCCTAGT+CGG | - | chr8.1:35470420-35470439 | MS.gene008864:intron | 50.0% | |
| AGGACCCACTGTGTTATCAC+TGG | - | chr8.1:35473021-35473040 | MS.gene008864:intron | 50.0% | |
| AGTTACACAGAGACCTCCCA+TGG | - | chr8.1:35471072-35471091 | MS.gene008864:intron | 50.0% | |
| ATCGAGAAGGAAGAGAGCAG+AGG | + | chr8.1:35470004-35470023 | None:intergenic | 50.0% | |
| CAAGCTGGGGGATGAAATGA+AGG | + | chr8.1:35471966-35471985 | None:intergenic | 50.0% | |
| CAAGTACGCTGCCGAATAAG+TGG | + | chr8.1:35472800-35472819 | None:intergenic | 50.0% | |
| CACCAAGCTCATCGAGAAAG+AGG | - | chr8.1:35470095-35470114 | MS.gene008864:intron | 50.0% | |
| CACTTATTCGGCAGCGTACT+TGG | - | chr8.1:35472798-35472817 | MS.gene008864:intron | 50.0% | |
| CCCATTGATGTCCGCACATT+TGG | + | chr8.1:35473914-35473933 | None:intergenic | 50.0% | |
| CTCATTTGGCGCGATTATCG+TGG | - | chr8.1:35470039-35470058 | MS.gene008864:CDS | 50.0% | |
| CTCGCTAAGAATCTTCGCCT+CGG | + | chr8.1:35471023-35471042 | None:intergenic | 50.0% | |
| GACATACAGACTCAGCACAC+AGG | - | chr8.1:35473469-35473488 | MS.gene008864:intron | 50.0% | |
| GCGTACTTGGCCAAACAAAC+AGG | - | chr8.1:35472811-35472830 | MS.gene008864:intron | 50.0% | |
| GCTGTATCTTGGCGTAGTGA+AGG | - | chr8.1:35471106-35471125 | MS.gene008864:intron | 50.0% | |
| GCTTCCTCGTCTGTTATGCT+GGG | + | chr8.1:35474143-35474162 | None:intergenic | 50.0% | |
| GGCATGCCAGAGTGTAAACT+TGG | - | chr8.1:35473147-35473166 | MS.gene008864:intron | 50.0% | |
| TACAGACTCAGCACACAGGT+TGG | - | chr8.1:35473473-35473492 | MS.gene008864:intron | 50.0% | |
| TCAAAGGCCGCGTTCTCATT+TGG | - | chr8.1:35470025-35470044 | MS.gene008864:CDS | 50.0% | |
| TCTTCCCAGCATAACAGACG+AGG | - | chr8.1:35474136-35474155 | MS.gene008864:CDS | 50.0% | |
| TCTTCGCCTCGGTATATTGG+GGG | + | chr8.1:35471012-35471031 | None:intergenic | 50.0% | |
| TGACCCATCAGGTGGGATAA+AGG | + | chr8.1:35473438-35473457 | None:intergenic | 50.0% | |
| TGATGTCCGCACATTTGGAG+TGG | + | chr8.1:35473909-35473928 | None:intergenic | 50.0% | |
| TGCTTCCTCGTCTGTTATGC+TGG | + | chr8.1:35474144-35474163 | None:intergenic | 50.0% | |
| TGGGTATCAGGCTCTTCCAT+GGG | - | chr8.1:35474764-35474783 | MS.gene008864:CDS | 50.0% | |
| TGGTTACCCCCAATATACCG+AGG | - | chr8.1:35471003-35471022 | MS.gene008864:intron | 50.0% | |
| ! | GAAGCGTTCAGCTTCAACAG+CGG | + | chr8.1:35470073-35470092 | None:intergenic | 50.0% |
| ! | GCATTTGTTACAGCCATGGG+AGG | + | chr8.1:35471088-35471107 | None:intergenic | 50.0% |
| ! | TAGCAGGCAGGTAGGTATTG+AGG | + | chr8.1:35472881-35472900 | None:intergenic | 50.0% |
| ! | TTTGGAGTGGTTGCATCAGC+AGG | + | chr8.1:35473896-35473915 | None:intergenic | 50.0% |
| !! | AACAGTGAAGTACCGGTAGC+AGG | + | chr8.1:35472897-35472916 | None:intergenic | 50.0% |
| !! | AGCAGGCAGGTAGGTATTGA+GGG | + | chr8.1:35472880-35472899 | None:intergenic | 50.0% |
| !! | GGGAAAAGCGATTGACTTGG+AGG | - | chr8.1:35473215-35473234 | MS.gene008864:intron | 50.0% |
| !! | TAACCTATGCAGCACCGACT+AGG | + | chr8.1:35470437-35470456 | None:intergenic | 50.0% |
| !! | TCCTTGGGAAAGTGTTCCGA+AGG | - | chr8.1:35471599-35471618 | MS.gene008864:CDS | 50.0% |
| AGCTCACACACGGGCAAGTT+AGG | - | chr8.1:35471677-35471696 | MS.gene008864:intron | 55.0% | |
| CGCGGCCTTTGATATCGAGA+AGG | + | chr8.1:35470017-35470036 | None:intergenic | 55.0% | |
| GCACAAGGTAGAGCGACCAA+GGG | - | chr8.1:35473195-35473214 | MS.gene008864:intron | 55.0% | |
| GCAGGGAGATCAACAGTCTC+AGG | - | chr8.1:35470562-35470581 | MS.gene008864:intron | 55.0% | |
| GTGGGTATCAGGCTCTTCCA+TGG | - | chr8.1:35474763-35474782 | MS.gene008864:CDS | 55.0% | |
| !! | ATGCCTAGTCGGTGCTGCAT+AGG | - | chr8.1:35470431-35470450 | MS.gene008864:intron | 55.0% |
| !! | CAGCACCGACTAGGCATATC+CGG | + | chr8.1:35470428-35470447 | None:intergenic | 55.0% |
| CGCTGCCGAATAAGTGGGTG+TGG | + | chr8.1:35472794-35472813 | None:intergenic | 60.0% | |
| GGCACAAGGTAGAGCGACCA+AGG | - | chr8.1:35473194-35473213 | MS.gene008864:intron | 60.0% | |
| GGCAGTGGGATGTCGAACTC+TGG | + | chr8.1:35472657-35472676 | None:intergenic | 60.0% | |
| GTGGTTGCATCAGCAGGCAC+AGG | + | chr8.1:35473890-35473909 | None:intergenic | 60.0% | |
| !! | AGTACCGGTAGCAGGCAGGT+AGG | + | chr8.1:35472889-35472908 | None:intergenic | 60.0% |
| !! | GTGAAGTACCGGTAGCAGGC+AGG | + | chr8.1:35472893-35472912 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 35469988 | 35474833 | 35469988 | ID=MS.gene008864 |
| chr8.1 | mRNA | 35469988 | 35474833 | 35469988 | ID=MS.gene008864.t1;Parent=MS.gene008864 |
| chr8.1 | exon | 35474705 | 35474833 | 35474705 | ID=MS.gene008864.t1.exon1;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35474705 | 35474833 | 35474705 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| chr8.1 | exon | 35474109 | 35474255 | 35474109 | ID=MS.gene008864.t1.exon2;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35474109 | 35474255 | 35474109 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| chr8.1 | exon | 35473937 | 35473999 | 35473937 | ID=MS.gene008864.t1.exon3;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35473937 | 35473999 | 35473937 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| chr8.1 | exon | 35473671 | 35473847 | 35473671 | ID=MS.gene008864.t1.exon4;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35473671 | 35473847 | 35473671 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| chr8.1 | exon | 35473484 | 35473587 | 35473484 | ID=MS.gene008864.t1.exon5;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35473484 | 35473587 | 35473484 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| chr8.1 | exon | 35471568 | 35471675 | 35471568 | ID=MS.gene008864.t1.exon6;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35471568 | 35471675 | 35471568 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| chr8.1 | exon | 35471331 | 35471427 | 35471331 | ID=MS.gene008864.t1.exon7;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35471331 | 35471427 | 35471331 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| chr8.1 | exon | 35471136 | 35471233 | 35471136 | ID=MS.gene008864.t1.exon8;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35471136 | 35471233 | 35471136 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| chr8.1 | exon | 35470821 | 35470962 | 35470821 | ID=MS.gene008864.t1.exon9;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35470821 | 35470962 | 35470821 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| chr8.1 | exon | 35470589 | 35470711 | 35470589 | ID=MS.gene008864.t1.exon10;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35470589 | 35470711 | 35470589 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| chr8.1 | exon | 35469988 | 35470086 | 35469988 | ID=MS.gene008864.t1.exon11;Parent=MS.gene008864.t1 |
| chr8.1 | CDS | 35469988 | 35470086 | 35469988 | ID=cds.MS.gene008864.t1;Parent=MS.gene008864.t1 |
| Gene Sequence |
| Protein sequence |
