Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073163.t1 | XP_003596716.1 | 73.8 | 248 | 23 | 3 | 1 | 206 | 71 | 318 | 5.10E-88 | 334 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073163.t1 | Q9FLC0 | 50.8 | 250 | 78 | 5 | 1 | 206 | 76 | 324 | 4.0e-57 | 222.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073163.t1 | G7IM81 | 73.8 | 248 | 23 | 3 | 1 | 206 | 71 | 318 | 3.7e-88 | 334.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene073163 | 0.811232 | 7.76E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene073163 | 0.807224 | 5.61E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene073163 | 0.837203 | 5.97E-57 | -1.69E-46 |
| MS.gene051332 | MS.gene073163 | 0.822079 | 2.87E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene073163 | 0.820143 | 8.01E-53 | -1.69E-46 |
| MS.gene051800 | MS.gene073163 | 0.821074 | 4.90E-53 | -1.69E-46 |
| MS.gene052037 | MS.gene073163 | 0.829394 | 5.28E-55 | -1.69E-46 |
| MS.gene052239 | MS.gene073163 | -0.816638 | 4.99E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene073163 | 0.804193 | 2.43E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene073163 | 0.812143 | 4.92E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene073163 | 0.806704 | 7.23E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene073163 | 0.8312 | 1.91E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene073163 | 0.816414 | 5.60E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene073163 | 0.816553 | 5.21E-52 | -1.69E-46 |
| MS.gene055724 | MS.gene073163 | 0.814509 | 1.49E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene073163 | 0.816648 | 4.96E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene073163 | 0.812878 | 3.40E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene073163 | 0.824463 | 7.96E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene073163 | 0.811963 | 5.38E-51 | -1.69E-46 |
| MS.gene059438 | MS.gene073163 | 0.825324 | 4.99E-54 | -1.69E-46 |
| MS.gene059439 | MS.gene073163 | 0.852906 | 3.39E-61 | -1.69E-46 |
| MS.gene059440 | MS.gene073163 | 0.804709 | 1.90E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene073163 | 0.81233 | 4.48E-51 | -1.69E-46 |
| MS.gene060167 | MS.gene073163 | 0.80644 | 8.22E-50 | -1.69E-46 |
| MS.gene060373 | MS.gene073163 | 0.810743 | 9.90E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene073163 | 0.801971 | 7.00E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073163.t1 | MTR_2g084010 | 73.790 | 248 | 23 | 3 | 1 | 206 | 71 | 318 | 2.19e-121 | 347 |
| MS.gene073163.t1 | MTR_2g084020 | 72.177 | 248 | 27 | 3 | 1 | 206 | 71 | 318 | 1.92e-119 | 342 |
| MS.gene073163.t1 | MTR_2g084000 | 64.919 | 248 | 45 | 3 | 1 | 206 | 72 | 319 | 4.35e-108 | 313 |
| MS.gene073163.t1 | MTR_2g084080 | 66.129 | 248 | 41 | 4 | 1 | 206 | 71 | 317 | 7.18e-108 | 312 |
| MS.gene073163.t1 | MTR_2g084110 | 65.323 | 248 | 43 | 4 | 1 | 206 | 71 | 317 | 2.67e-107 | 311 |
| MS.gene073163.t1 | MTR_2g084090 | 59.438 | 249 | 57 | 5 | 1 | 206 | 71 | 318 | 6.44e-93 | 274 |
| MS.gene073163.t1 | MTR_5g083860 | 51.600 | 250 | 76 | 4 | 1 | 206 | 77 | 325 | 5.27e-78 | 236 |
| MS.gene073163.t1 | MTR_3g094650 | 52.400 | 250 | 74 | 4 | 1 | 206 | 74 | 322 | 8.88e-77 | 233 |
| MS.gene073163.t1 | MTR_3g094670 | 54.000 | 250 | 70 | 5 | 1 | 206 | 74 | 322 | 1.21e-74 | 228 |
| MS.gene073163.t1 | MTR_3g094630 | 52.400 | 250 | 74 | 4 | 1 | 206 | 74 | 322 | 2.06e-71 | 219 |
| MS.gene073163.t1 | MTR_3g466200 | 47.809 | 251 | 85 | 5 | 1 | 206 | 71 | 320 | 1.18e-70 | 218 |
| MS.gene073163.t1 | MTR_7g072510 | 47.984 | 248 | 86 | 4 | 1 | 206 | 66 | 312 | 1.93e-70 | 217 |
| MS.gene073163.t1 | MTR_5g074860 | 53.774 | 212 | 90 | 5 | 1 | 205 | 75 | 285 | 5.94e-70 | 215 |
| MS.gene073163.t1 | MTR_1g115900 | 48.400 | 250 | 84 | 4 | 1 | 206 | 73 | 321 | 2.13e-68 | 212 |
| MS.gene073163.t1 | MTR_4g029170 | 48.800 | 250 | 83 | 5 | 1 | 206 | 73 | 321 | 3.22e-68 | 211 |
| MS.gene073163.t1 | MTR_5g074970 | 47.619 | 252 | 85 | 5 | 1 | 206 | 76 | 326 | 3.43e-67 | 209 |
| MS.gene073163.t1 | MTR_4g029180 | 48.000 | 250 | 85 | 5 | 1 | 206 | 73 | 321 | 1.48e-66 | 207 |
| MS.gene073163.t1 | MTR_3g072190 | 47.791 | 249 | 85 | 4 | 1 | 206 | 5 | 251 | 1.64e-66 | 205 |
| MS.gene073163.t1 | MTR_7g072480 | 46.185 | 249 | 89 | 4 | 1 | 206 | 70 | 316 | 5.72e-66 | 206 |
| MS.gene073163.t1 | MTR_7g026990 | 44.355 | 248 | 94 | 5 | 1 | 206 | 77 | 322 | 8.41e-66 | 205 |
| MS.gene073163.t1 | MTR_3g072190 | 47.791 | 249 | 85 | 4 | 1 | 206 | 72 | 318 | 9.56e-66 | 205 |
| MS.gene073163.t1 | MTR_4g029200 | 47.984 | 248 | 86 | 5 | 1 | 206 | 92 | 338 | 4.66e-65 | 204 |
| MS.gene073163.t1 | MTR_5g074860 | 48.207 | 251 | 83 | 8 | 1 | 205 | 75 | 324 | 2.50e-64 | 202 |
| MS.gene073163.t1 | MTR_5g021060 | 44.314 | 255 | 93 | 3 | 1 | 206 | 76 | 330 | 5.63e-63 | 198 |
| MS.gene073163.t1 | MTR_5g074740 | 47.619 | 252 | 85 | 8 | 1 | 206 | 71 | 321 | 6.30e-63 | 198 |
| MS.gene073163.t1 | MTR_5g074760 | 47.619 | 252 | 85 | 8 | 1 | 206 | 71 | 321 | 8.08e-63 | 198 |
| MS.gene073163.t1 | MTR_5g074710 | 47.222 | 252 | 86 | 7 | 1 | 206 | 71 | 321 | 8.08e-63 | 198 |
| MS.gene073163.t1 | MTR_5g017860 | 46.275 | 255 | 87 | 6 | 1 | 206 | 73 | 326 | 8.79e-63 | 198 |
| MS.gene073163.t1 | MTR_4g029190 | 45.418 | 251 | 90 | 4 | 1 | 206 | 92 | 340 | 3.92e-62 | 196 |
| MS.gene073163.t1 | MTR_5g017850 | 45.490 | 255 | 89 | 6 | 1 | 206 | 73 | 326 | 8.73e-61 | 192 |
| MS.gene073163.t1 | MTR_3g466180 | 48.387 | 248 | 85 | 4 | 1 | 206 | 77 | 323 | 1.85e-60 | 192 |
| MS.gene073163.t1 | MTR_4g074995 | 46.025 | 239 | 96 | 4 | 1 | 206 | 70 | 308 | 5.73e-60 | 190 |
| MS.gene073163.t1 | MTR_4g083710 | 43.651 | 252 | 96 | 4 | 1 | 206 | 73 | 324 | 7.92e-60 | 190 |
| MS.gene073163.t1 | MTR_8g076820 | 43.137 | 255 | 96 | 4 | 1 | 206 | 76 | 330 | 1.45e-59 | 190 |
| MS.gene073163.t1 | MTR_3g467600 | 43.651 | 252 | 96 | 6 | 1 | 206 | 73 | 324 | 1.47e-58 | 187 |
| MS.gene073163.t1 | MTR_7g072490 | 49.246 | 199 | 88 | 3 | 1 | 199 | 2 | 187 | 1.74e-57 | 181 |
| MS.gene073163.t1 | MTR_1g022970 | 42.969 | 256 | 96 | 5 | 1 | 206 | 92 | 347 | 1.07e-56 | 183 |
| MS.gene073163.t1 | MTR_1g054205 | 41.634 | 257 | 99 | 5 | 1 | 206 | 70 | 326 | 1.56e-53 | 174 |
| MS.gene073163.t1 | MTR_2g029830 | 40.234 | 256 | 103 | 5 | 1 | 206 | 6 | 261 | 8.03e-53 | 171 |
| MS.gene073163.t1 | MTR_7g093370 | 40.856 | 257 | 101 | 5 | 1 | 206 | 115 | 371 | 5.05e-52 | 171 |
| MS.gene073163.t1 | MTR_2g029830 | 40.234 | 256 | 103 | 5 | 1 | 206 | 74 | 329 | 5.73e-52 | 171 |
| MS.gene073163.t1 | MTR_5g049280 | 39.382 | 259 | 104 | 6 | 1 | 206 | 79 | 337 | 1.01e-51 | 170 |
| MS.gene073163.t1 | MTR_4g122640 | 39.130 | 253 | 107 | 3 | 1 | 206 | 84 | 336 | 2.22e-51 | 169 |
| MS.gene073163.t1 | MTR_2g029815 | 41.406 | 256 | 100 | 5 | 1 | 206 | 75 | 330 | 1.26e-50 | 167 |
| MS.gene073163.t1 | MTR_2g029560 | 39.062 | 256 | 106 | 5 | 1 | 206 | 70 | 325 | 1.36e-50 | 167 |
| MS.gene073163.t1 | MTR_2g029860 | 39.844 | 256 | 104 | 4 | 1 | 206 | 75 | 330 | 2.86e-50 | 166 |
| MS.gene073163.t1 | MTR_2g029750 | 39.453 | 256 | 105 | 4 | 1 | 206 | 75 | 330 | 2.44e-49 | 164 |
| MS.gene073163.t1 | MTR_2g029800 | 40.625 | 256 | 102 | 5 | 1 | 206 | 75 | 330 | 4.78e-49 | 163 |
| MS.gene073163.t1 | MTR_4g074990 | 39.683 | 252 | 90 | 4 | 1 | 206 | 70 | 305 | 6.72e-49 | 161 |
| MS.gene073163.t1 | MTR_2g029820 | 39.844 | 256 | 104 | 4 | 1 | 206 | 75 | 330 | 9.95e-49 | 162 |
| MS.gene073163.t1 | MTR_5g014100 | 38.077 | 260 | 107 | 4 | 1 | 206 | 72 | 331 | 2.03e-48 | 161 |
| MS.gene073163.t1 | MTR_2g040000 | 40.996 | 261 | 95 | 6 | 1 | 206 | 75 | 331 | 3.91e-48 | 160 |
| MS.gene073163.t1 | MTR_2g028980 | 39.453 | 256 | 105 | 5 | 1 | 206 | 75 | 330 | 2.83e-47 | 159 |
| MS.gene073163.t1 | MTR_4g030890 | 40.000 | 255 | 100 | 7 | 1 | 206 | 146 | 396 | 6.46e-47 | 159 |
| MS.gene073163.t1 | MTR_4g125940 | 39.147 | 258 | 103 | 6 | 1 | 206 | 19 | 274 | 2.39e-46 | 154 |
| MS.gene073163.t1 | MTR_2g029740 | 37.109 | 256 | 111 | 4 | 1 | 206 | 75 | 330 | 2.73e-46 | 156 |
| MS.gene073163.t1 | MTR_2g029850 | 38.672 | 256 | 107 | 4 | 1 | 206 | 75 | 330 | 1.11e-45 | 154 |
| MS.gene073163.t1 | MTR_4g125940 | 39.147 | 258 | 103 | 6 | 1 | 206 | 74 | 329 | 1.64e-45 | 153 |
| MS.gene073163.t1 | MTR_2g029910 | 36.187 | 257 | 113 | 5 | 1 | 206 | 76 | 332 | 6.55e-44 | 150 |
| MS.gene073163.t1 | MTR_2g029730 | 37.109 | 256 | 111 | 5 | 1 | 206 | 71 | 326 | 7.54e-44 | 149 |
| MS.gene073163.t1 | MTR_4g074980 | 41.739 | 230 | 104 | 6 | 1 | 206 | 71 | 294 | 1.87e-43 | 147 |
| MS.gene073163.t1 | MTR_0155s0040 | 37.097 | 248 | 109 | 9 | 1 | 206 | 73 | 315 | 6.56e-43 | 146 |
| MS.gene073163.t1 | MTR_4g031140 | 36.471 | 255 | 109 | 6 | 1 | 206 | 74 | 324 | 4.86e-42 | 145 |
| MS.gene073163.t1 | MTR_3g092990 | 37.109 | 256 | 110 | 6 | 1 | 206 | 61 | 315 | 1.23e-41 | 143 |
| MS.gene073163.t1 | MTR_3g092990 | 37.109 | 256 | 110 | 6 | 1 | 206 | 72 | 326 | 2.32e-41 | 142 |
| MS.gene073163.t1 | MTR_7g086820 | 33.858 | 254 | 113 | 7 | 1 | 206 | 66 | 312 | 2.57e-38 | 134 |
| MS.gene073163.t1 | MTR_5g074700 | 39.207 | 227 | 77 | 9 | 26 | 206 | 3 | 214 | 6.46e-37 | 128 |
| MS.gene073163.t1 | MTR_2g008710 | 36.047 | 258 | 108 | 7 | 1 | 206 | 73 | 325 | 4.17e-36 | 129 |
| MS.gene073163.t1 | MTR_7g086870 | 35.081 | 248 | 115 | 8 | 1 | 206 | 68 | 311 | 1.16e-35 | 127 |
| MS.gene073163.t1 | MTR_4g046713 | 34.241 | 257 | 115 | 6 | 1 | 206 | 73 | 326 | 3.24e-35 | 127 |
| MS.gene073163.t1 | MTR_4g114210 | 35.135 | 259 | 110 | 7 | 1 | 206 | 67 | 320 | 3.74e-35 | 126 |
| MS.gene073163.t1 | MTR_1g077000 | 34.959 | 246 | 117 | 6 | 1 | 206 | 85 | 327 | 5.68e-35 | 126 |
| MS.gene073163.t1 | MTR_6g027440 | 34.000 | 250 | 119 | 5 | 1 | 206 | 67 | 314 | 2.89e-34 | 124 |
| MS.gene073163.t1 | MTR_4g074980 | 40.984 | 183 | 62 | 3 | 1 | 137 | 71 | 253 | 3.23e-34 | 122 |
| MS.gene073163.t1 | MTR_1g101830 | 34.902 | 255 | 112 | 8 | 1 | 206 | 73 | 322 | 3.41e-34 | 124 |
| MS.gene073163.t1 | MTR_5g022870 | 35.547 | 256 | 107 | 8 | 1 | 206 | 69 | 316 | 7.12e-34 | 123 |
| MS.gene073163.t1 | MTR_1g009750 | 34.749 | 259 | 113 | 9 | 1 | 206 | 73 | 328 | 1.35e-33 | 122 |
| MS.gene073163.t1 | MTR_7g029030 | 34.524 | 252 | 117 | 6 | 1 | 206 | 71 | 320 | 1.39e-33 | 122 |
| MS.gene073163.t1 | MTR_4g133800 | 34.902 | 255 | 109 | 8 | 1 | 206 | 87 | 333 | 1.76e-33 | 122 |
| MS.gene073163.t1 | MTR_1g086320 | 33.846 | 260 | 116 | 7 | 1 | 206 | 76 | 333 | 5.94e-33 | 121 |
| MS.gene073163.t1 | MTR_2g088770 | 33.594 | 256 | 118 | 5 | 1 | 206 | 72 | 325 | 1.10e-32 | 120 |
| MS.gene073163.t1 | MTR_2g008730 | 35.950 | 242 | 101 | 6 | 17 | 206 | 62 | 301 | 1.36e-32 | 119 |
| MS.gene073163.t1 | MTR_6g043280 | 35.857 | 251 | 111 | 8 | 1 | 206 | 87 | 332 | 2.72e-32 | 119 |
| MS.gene073163.t1 | MTR_8g075100 | 33.984 | 256 | 111 | 8 | 1 | 206 | 72 | 319 | 2.97e-32 | 119 |
| MS.gene073163.t1 | MTR_7g107520 | 35.547 | 256 | 109 | 7 | 1 | 206 | 71 | 320 | 5.52e-32 | 118 |
| MS.gene073163.t1 | MTR_1g025980 | 34.375 | 256 | 109 | 8 | 1 | 205 | 70 | 317 | 3.84e-31 | 115 |
| MS.gene073163.t1 | MTR_1g038680 | 34.749 | 259 | 115 | 7 | 1 | 206 | 75 | 332 | 5.01e-31 | 115 |
| MS.gene073163.t1 | MTR_2g008160 | 36.607 | 224 | 119 | 8 | 1 | 206 | 70 | 288 | 5.70e-31 | 114 |
| MS.gene073163.t1 | MTR_2g437770 | 34.524 | 252 | 113 | 9 | 1 | 206 | 96 | 341 | 1.26e-30 | 115 |
| MS.gene073163.t1 | MTR_1g066710 | 30.315 | 254 | 124 | 6 | 2 | 206 | 74 | 323 | 2.86e-29 | 111 |
| MS.gene073163.t1 | MTR_3g072210 | 40.000 | 185 | 68 | 5 | 65 | 206 | 54 | 238 | 3.21e-29 | 108 |
| MS.gene073163.t1 | MTR_1g090760 | 32.432 | 259 | 120 | 8 | 1 | 206 | 74 | 330 | 6.17e-29 | 110 |
| MS.gene073163.t1 | MTR_4g095450 | 32.143 | 252 | 123 | 6 | 1 | 205 | 73 | 323 | 3.65e-28 | 108 |
| MS.gene073163.t1 | MTR_4g132490 | 29.502 | 261 | 121 | 4 | 1 | 206 | 75 | 327 | 6.11e-28 | 107 |
| MS.gene073163.t1 | MTR_5g016010 | 31.907 | 257 | 122 | 6 | 1 | 205 | 73 | 328 | 1.30e-27 | 107 |
| MS.gene073163.t1 | MTR_1g086490 | 33.083 | 266 | 117 | 6 | 1 | 206 | 76 | 340 | 2.01e-27 | 106 |
| MS.gene073163.t1 | MTR_1g066380 | 29.365 | 252 | 129 | 6 | 2 | 206 | 6 | 255 | 3.37e-27 | 104 |
| MS.gene073163.t1 | MTR_2g008160 | 32.432 | 259 | 117 | 9 | 1 | 206 | 70 | 323 | 4.40e-27 | 105 |
| MS.gene073163.t1 | MTR_6g043240 | 32.129 | 249 | 121 | 7 | 1 | 206 | 88 | 331 | 1.28e-26 | 104 |
| MS.gene073163.t1 | MTR_1g066380 | 29.365 | 252 | 129 | 6 | 2 | 206 | 74 | 323 | 1.50e-26 | 103 |
| MS.gene073163.t1 | MTR_4g087965 | 32.171 | 258 | 120 | 8 | 1 | 204 | 88 | 344 | 3.07e-26 | 103 |
| MS.gene073163.t1 | MTR_4g127670 | 32.677 | 254 | 115 | 7 | 1 | 202 | 70 | 319 | 4.24e-26 | 102 |
| MS.gene073163.t1 | MTR_6g043460 | 32.653 | 245 | 120 | 6 | 1 | 202 | 82 | 324 | 5.74e-26 | 102 |
| MS.gene073163.t1 | MTR_0286s0010 | 30.980 | 255 | 126 | 6 | 1 | 206 | 81 | 334 | 7.04e-26 | 102 |
| MS.gene073163.t1 | MTR_6g008075 | 30.980 | 255 | 126 | 6 | 1 | 206 | 81 | 334 | 7.04e-26 | 102 |
| MS.gene073163.t1 | MTR_5g074770 | 52.222 | 90 | 41 | 2 | 117 | 205 | 20 | 108 | 1.28e-25 | 95.9 |
| MS.gene073163.t1 | MTR_4g132110 | 31.102 | 254 | 122 | 7 | 2 | 206 | 79 | 328 | 1.34e-25 | 101 |
| MS.gene073163.t1 | MTR_3g105790 | 27.626 | 257 | 130 | 5 | 1 | 206 | 71 | 322 | 2.10e-25 | 100 |
| MS.gene073163.t1 | MTR_3g072260 | 72.581 | 62 | 17 | 0 | 1 | 62 | 72 | 133 | 8.44e-24 | 92.4 |
| MS.gene073163.t1 | MTR_2g067450 | 33.074 | 257 | 117 | 11 | 1 | 205 | 56 | 309 | 1.88e-23 | 95.5 |
| MS.gene073163.t1 | MTR_4g132110 | 30.502 | 259 | 122 | 8 | 2 | 206 | 79 | 333 | 1.96e-23 | 95.9 |
| MS.gene073163.t1 | MTR_2g099175 | 28.462 | 260 | 126 | 5 | 1 | 206 | 82 | 335 | 3.20e-23 | 95.1 |
| MS.gene073163.t1 | MTR_3g105790 | 27.083 | 240 | 123 | 4 | 18 | 206 | 8 | 246 | 3.81e-23 | 93.6 |
| MS.gene073163.t1 | MTR_8g062780 | 28.794 | 257 | 131 | 7 | 1 | 206 | 69 | 324 | 1.68e-21 | 90.5 |
| MS.gene073163.t1 | MTR_2g008160 | 50.575 | 87 | 40 | 2 | 1 | 87 | 70 | 153 | 2.31e-20 | 85.1 |
| MS.gene073163.t1 | MTR_3g462850 | 40.179 | 112 | 63 | 4 | 99 | 206 | 38 | 149 | 1.44e-19 | 81.6 |
| MS.gene073163.t1 | MTR_1g009750 | 28.571 | 259 | 112 | 10 | 1 | 206 | 73 | 311 | 4.51e-19 | 83.6 |
| MS.gene073163.t1 | MTR_2g078610 | 47.826 | 92 | 45 | 2 | 1 | 90 | 122 | 212 | 1.48e-18 | 83.2 |
| MS.gene073163.t1 | MTR_7g086790 | 49.351 | 77 | 38 | 1 | 2 | 78 | 17 | 92 | 1.96e-18 | 79.7 |
| MS.gene073163.t1 | MTR_2g077990 | 47.826 | 92 | 45 | 2 | 1 | 90 | 122 | 212 | 2.05e-18 | 82.8 |
| MS.gene073163.t1 | MTR_2g078280 | 47.826 | 92 | 45 | 2 | 1 | 90 | 122 | 212 | 2.17e-18 | 82.4 |
| MS.gene073163.t1 | MTR_2g067440 | 50.000 | 88 | 41 | 3 | 1 | 87 | 106 | 191 | 2.76e-18 | 82.0 |
| MS.gene073163.t1 | MTR_1g066640 | 43.210 | 81 | 45 | 1 | 2 | 82 | 74 | 153 | 9.36e-15 | 71.6 |
| MS.gene073163.t1 | MTR_1g066640 | 34.653 | 101 | 62 | 2 | 109 | 206 | 224 | 323 | 1.84e-11 | 62.4 |
| MS.gene073163.t1 | MTR_7g107500 | 43.529 | 85 | 46 | 1 | 122 | 206 | 15 | 97 | 9.02e-14 | 65.1 |
| MS.gene073163.t1 | MTR_1g098320 | 43.038 | 79 | 44 | 1 | 128 | 206 | 47 | 124 | 1.14e-13 | 65.9 |
| MS.gene073163.t1 | MTR_1g066680 | 41.975 | 81 | 46 | 1 | 2 | 82 | 73 | 152 | 6.70e-13 | 66.6 |
| MS.gene073163.t1 | MTR_1g066680 | 37.805 | 82 | 50 | 1 | 125 | 206 | 242 | 322 | 3.50e-11 | 61.6 |
| MS.gene073163.t1 | MTR_7g086785 | 43.836 | 73 | 40 | 1 | 1 | 73 | 4 | 75 | 1.26e-12 | 63.2 |
| MS.gene073163.t1 | MTR_2g029880 | 43.056 | 72 | 40 | 1 | 136 | 206 | 117 | 188 | 1.82e-12 | 63.9 |
| MS.gene073163.t1 | MTR_0147s0010 | 46.875 | 64 | 34 | 0 | 25 | 88 | 134 | 197 | 2.03e-12 | 65.5 |
| MS.gene073163.t1 | MTR_2g077980 | 43.617 | 94 | 48 | 4 | 117 | 206 | 193 | 285 | 3.97e-12 | 63.9 |
| MS.gene073163.t1 | MTR_1g089005 | 57.895 | 57 | 23 | 1 | 5 | 61 | 71 | 126 | 1.63e-11 | 60.5 |
| MS.gene073163.t1 | MTR_2g078560 | 36.634 | 101 | 57 | 3 | 108 | 202 | 217 | 316 | 1.93e-11 | 62.4 |
| MS.gene073163.t1 | MTR_5g058120 | 37.500 | 104 | 63 | 2 | 99 | 202 | 54 | 155 | 2.13e-11 | 61.6 |
| MS.gene073163.t1 | MTR_6g048160 | 47.692 | 65 | 30 | 2 | 1 | 65 | 29 | 89 | 3.45e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073163.t1 | AT5G05340 | 50.800 | 250 | 78 | 5 | 1 | 206 | 76 | 324 | 9.47e-76 | 231 |
| MS.gene073163.t1 | AT5G58390 | 46.245 | 253 | 86 | 5 | 1 | 206 | 67 | 316 | 8.39e-62 | 195 |
| MS.gene073163.t1 | AT4G36430 | 42.745 | 255 | 97 | 4 | 1 | 206 | 76 | 330 | 1.05e-61 | 195 |
| MS.gene073163.t1 | AT1G14550 | 43.600 | 250 | 97 | 3 | 1 | 206 | 72 | 321 | 1.24e-60 | 192 |
| MS.gene073163.t1 | AT5G58400 | 46.215 | 251 | 89 | 5 | 1 | 206 | 76 | 325 | 1.45e-60 | 192 |
| MS.gene073163.t1 | AT3G50990 | 42.745 | 255 | 97 | 3 | 1 | 206 | 87 | 341 | 6.20e-60 | 191 |
| MS.gene073163.t1 | AT5G66390 | 43.922 | 255 | 94 | 4 | 1 | 206 | 79 | 333 | 6.21e-60 | 191 |
| MS.gene073163.t1 | AT1G44970 | 45.312 | 256 | 90 | 5 | 1 | 206 | 91 | 346 | 2.21e-59 | 190 |
| MS.gene073163.t1 | AT2G18140 | 42.578 | 256 | 96 | 4 | 1 | 206 | 81 | 335 | 5.29e-59 | 188 |
| MS.gene073163.t1 | AT2G18150 | 42.188 | 256 | 97 | 3 | 1 | 206 | 82 | 336 | 5.99e-59 | 188 |
| MS.gene073163.t1 | AT1G49570 | 43.307 | 254 | 91 | 5 | 1 | 202 | 94 | 346 | 1.65e-57 | 185 |
| MS.gene073163.t1 | AT1G14540 | 42.169 | 249 | 101 | 3 | 1 | 206 | 67 | 315 | 4.83e-56 | 180 |
| MS.gene073163.t1 | AT2G38390 | 40.467 | 257 | 102 | 4 | 1 | 206 | 77 | 333 | 3.77e-55 | 179 |
| MS.gene073163.t1 | AT5G06720 | 40.234 | 256 | 103 | 5 | 1 | 206 | 78 | 333 | 5.43e-54 | 176 |
| MS.gene073163.t1 | AT4G16270 | 40.784 | 255 | 100 | 5 | 1 | 206 | 96 | 348 | 2.62e-52 | 171 |
| MS.gene073163.t1 | AT3G32980 | 38.760 | 258 | 106 | 3 | 1 | 206 | 77 | 334 | 5.88e-52 | 171 |
| MS.gene073163.t1 | AT4G08780 | 38.760 | 258 | 106 | 4 | 1 | 206 | 70 | 327 | 8.92e-51 | 167 |
| MS.gene073163.t1 | AT5G06730 | 37.891 | 256 | 109 | 3 | 1 | 206 | 79 | 334 | 2.44e-50 | 167 |
| MS.gene073163.t1 | AT3G49110 | 37.984 | 258 | 108 | 3 | 1 | 206 | 79 | 336 | 2.88e-49 | 164 |
| MS.gene073163.t1 | AT3G49120 | 38.372 | 258 | 107 | 3 | 1 | 206 | 78 | 335 | 3.37e-49 | 164 |
| MS.gene073163.t1 | AT2G38380 | 38.911 | 257 | 106 | 4 | 1 | 206 | 77 | 333 | 1.36e-48 | 162 |
| MS.gene073163.t1 | AT4G08770 | 39.313 | 262 | 99 | 4 | 1 | 206 | 70 | 327 | 1.65e-47 | 159 |
| MS.gene073163.t1 | AT1G68850 | 35.769 | 260 | 113 | 7 | 1 | 206 | 76 | 335 | 2.23e-46 | 156 |
| MS.gene073163.t1 | AT2G35380 | 37.692 | 260 | 108 | 4 | 1 | 206 | 76 | 335 | 1.27e-45 | 154 |
| MS.gene073163.t1 | AT2G22420 | 38.824 | 255 | 103 | 7 | 1 | 206 | 69 | 319 | 3.22e-45 | 153 |
| MS.gene073163.t1 | AT5G19890 | 40.078 | 257 | 98 | 8 | 1 | 206 | 76 | 327 | 3.86e-45 | 152 |
| MS.gene073163.t1 | AT5G19880 | 39.768 | 259 | 103 | 6 | 1 | 206 | 71 | 329 | 8.53e-45 | 152 |
| MS.gene073163.t1 | AT3G03670 | 35.686 | 255 | 113 | 5 | 1 | 206 | 69 | 321 | 2.38e-42 | 145 |
| MS.gene073163.t1 | AT2G35380 | 37.295 | 244 | 99 | 4 | 17 | 206 | 4 | 247 | 4.40e-41 | 140 |
| MS.gene073163.t1 | AT5G17820 | 37.008 | 254 | 102 | 9 | 1 | 206 | 70 | 313 | 2.78e-39 | 137 |
| MS.gene073163.t1 | AT5G17820 | 37.008 | 254 | 102 | 9 | 1 | 206 | 123 | 366 | 1.97e-38 | 136 |
| MS.gene073163.t1 | AT5G15180 | 33.071 | 254 | 120 | 8 | 1 | 206 | 78 | 329 | 2.40e-36 | 130 |
| MS.gene073163.t1 | AT1G05240 | 33.333 | 261 | 112 | 8 | 1 | 206 | 72 | 325 | 1.05e-35 | 128 |
| MS.gene073163.t1 | AT1G05250 | 33.333 | 261 | 112 | 8 | 1 | 206 | 72 | 325 | 1.05e-35 | 128 |
| MS.gene073163.t1 | AT5G64120 | 34.783 | 253 | 113 | 6 | 1 | 206 | 81 | 328 | 6.60e-35 | 126 |
| MS.gene073163.t1 | AT1G05260 | 33.333 | 258 | 116 | 6 | 1 | 206 | 72 | 325 | 1.10e-34 | 125 |
| MS.gene073163.t1 | AT4G26010 | 35.600 | 250 | 109 | 8 | 1 | 206 | 68 | 309 | 3.81e-34 | 124 |
| MS.gene073163.t1 | AT4G26010 | 35.600 | 250 | 109 | 8 | 1 | 206 | 96 | 337 | 4.11e-34 | 124 |
| MS.gene073163.t1 | AT5G39580 | 35.433 | 254 | 111 | 6 | 1 | 206 | 71 | 319 | 6.75e-34 | 123 |
| MS.gene073163.t1 | AT3G01190 | 34.241 | 257 | 111 | 8 | 1 | 206 | 72 | 321 | 1.40e-33 | 122 |
| MS.gene073163.t1 | AT4G11290 | 32.819 | 259 | 118 | 4 | 1 | 206 | 71 | 326 | 1.84e-33 | 122 |
| MS.gene073163.t1 | AT5G14130 | 33.725 | 255 | 118 | 5 | 1 | 206 | 78 | 330 | 2.64e-33 | 122 |
| MS.gene073163.t1 | AT4G33420 | 35.366 | 246 | 116 | 6 | 1 | 206 | 83 | 325 | 2.73e-33 | 122 |
| MS.gene073163.t1 | AT5G14130 | 33.725 | 255 | 118 | 5 | 1 | 206 | 119 | 371 | 5.19e-33 | 122 |
| MS.gene073163.t1 | AT5G42180 | 33.858 | 254 | 113 | 7 | 1 | 205 | 69 | 316 | 5.78e-33 | 120 |
| MS.gene073163.t1 | AT1G71695 | 33.871 | 248 | 116 | 6 | 1 | 202 | 90 | 335 | 5.89e-33 | 121 |
| MS.gene073163.t1 | AT4G33420 | 35.366 | 246 | 116 | 6 | 1 | 206 | 130 | 372 | 6.71e-33 | 121 |
| MS.gene073163.t1 | AT2G41480 | 33.977 | 259 | 113 | 8 | 1 | 206 | 75 | 328 | 3.46e-32 | 119 |
| MS.gene073163.t1 | AT1G34510 | 34.959 | 246 | 116 | 7 | 1 | 206 | 68 | 309 | 5.59e-32 | 118 |
| MS.gene073163.t1 | AT4G30170 | 33.591 | 259 | 113 | 9 | 1 | 206 | 73 | 325 | 5.60e-32 | 118 |
| MS.gene073163.t1 | AT4G37530 | 33.333 | 258 | 119 | 7 | 1 | 206 | 73 | 329 | 1.71e-31 | 117 |
| MS.gene073163.t1 | AT5G64110 | 35.294 | 255 | 112 | 7 | 1 | 206 | 80 | 330 | 2.12e-31 | 117 |
| MS.gene073163.t1 | AT3G28200 | 32.669 | 251 | 123 | 6 | 1 | 206 | 67 | 316 | 1.47e-30 | 114 |
| MS.gene073163.t1 | AT5G64100 | 33.725 | 255 | 114 | 8 | 1 | 206 | 83 | 331 | 2.48e-30 | 114 |
| MS.gene073163.t1 | AT5G40150 | 31.349 | 252 | 126 | 6 | 1 | 206 | 78 | 328 | 1.13e-29 | 112 |
| MS.gene073163.t1 | AT4G25980 | 31.538 | 260 | 119 | 10 | 1 | 206 | 72 | 326 | 5.09e-29 | 110 |
| MS.gene073163.t1 | AT5G51890 | 32.812 | 256 | 117 | 9 | 1 | 206 | 72 | 322 | 5.98e-29 | 110 |
| MS.gene073163.t1 | AT1G30870 | 33.600 | 250 | 113 | 9 | 1 | 202 | 97 | 341 | 1.21e-28 | 110 |
| MS.gene073163.t1 | AT3G21770 | 31.746 | 252 | 120 | 6 | 1 | 202 | 75 | 324 | 1.71e-28 | 109 |
| MS.gene073163.t1 | AT3G49960 | 32.171 | 258 | 122 | 6 | 1 | 206 | 73 | 329 | 2.73e-28 | 108 |
| MS.gene073163.t1 | AT2G18980 | 32.558 | 258 | 117 | 6 | 1 | 206 | 71 | 323 | 3.95e-28 | 108 |
| MS.gene073163.t1 | AT2G43480 | 32.432 | 259 | 116 | 8 | 1 | 206 | 83 | 335 | 4.37e-28 | 108 |
| MS.gene073163.t1 | AT2G34060 | 32.558 | 258 | 119 | 8 | 1 | 204 | 88 | 344 | 1.11e-27 | 107 |
| MS.gene073163.t1 | AT5G24070 | 32.171 | 258 | 118 | 7 | 1 | 206 | 83 | 335 | 1.41e-27 | 107 |
| MS.gene073163.t1 | AT5G67400 | 31.395 | 258 | 124 | 6 | 1 | 206 | 73 | 329 | 1.54e-27 | 106 |
| MS.gene073163.t1 | AT4G17690 | 30.952 | 252 | 127 | 5 | 1 | 206 | 72 | 322 | 2.91e-27 | 105 |
| MS.gene073163.t1 | AT2G39040 | 34.457 | 267 | 106 | 12 | 1 | 206 | 92 | 350 | 4.69e-27 | 105 |
| MS.gene073163.t1 | AT4G37520 | 29.457 | 258 | 129 | 5 | 1 | 206 | 73 | 329 | 9.17e-27 | 104 |
| MS.gene073163.t1 | AT4G21960 | 31.890 | 254 | 120 | 8 | 2 | 206 | 78 | 327 | 2.11e-26 | 103 |
| MS.gene073163.t1 | AT5G22410 | 31.765 | 255 | 116 | 9 | 1 | 203 | 74 | 322 | 2.32e-25 | 100 |
| MS.gene073163.t1 | AT2G24800 | 29.457 | 258 | 125 | 6 | 1 | 206 | 77 | 329 | 2.98e-25 | 100 |
| MS.gene073163.t1 | AT4G37520 | 29.070 | 258 | 127 | 6 | 1 | 206 | 73 | 326 | 1.34e-24 | 99.0 |
| MS.gene073163.t1 | AT1G77100 | 32.031 | 256 | 118 | 9 | 1 | 206 | 70 | 319 | 1.46e-24 | 98.6 |
| MS.gene073163.t1 | AT2G37130 | 30.980 | 255 | 122 | 9 | 2 | 206 | 46 | 296 | 6.88e-24 | 96.3 |
| MS.gene073163.t1 | AT2G37130 | 30.980 | 255 | 122 | 9 | 2 | 206 | 77 | 327 | 1.18e-23 | 96.3 |
| MS.gene073163.t1 | AT5G47000 | 29.644 | 253 | 130 | 5 | 1 | 206 | 79 | 330 | 1.78e-23 | 95.9 |
| MS.gene073163.t1 | AT1G24110 | 30.350 | 257 | 126 | 5 | 1 | 206 | 68 | 322 | 4.44e-23 | 94.7 |
| MS.gene073163.t1 | AT4G37530 | 33.495 | 206 | 85 | 6 | 1 | 154 | 73 | 278 | 9.50e-22 | 90.5 |
| MS.gene073163.t1 | AT4G25980 | 49.425 | 87 | 41 | 2 | 1 | 87 | 117 | 200 | 1.66e-21 | 89.7 |
| MS.gene073163.t1 | AT4G31760 | 28.517 | 263 | 120 | 7 | 1 | 206 | 75 | 326 | 5.81e-21 | 89.0 |
| MS.gene073163.t1 | AT5G39580 | 53.659 | 82 | 34 | 2 | 1 | 82 | 71 | 148 | 9.03e-20 | 84.3 |
| MS.gene073163.t1 | AT4G33870 | 42.593 | 108 | 57 | 2 | 1 | 108 | 114 | 216 | 1.12e-19 | 86.3 |
| MS.gene073163.t1 | AT4G33870 | 41.111 | 90 | 37 | 3 | 115 | 202 | 322 | 397 | 1.99e-12 | 65.5 |
| MS.gene073163.t1 | AT3G17070 | 31.418 | 261 | 119 | 12 | 1 | 206 | 21 | 276 | 8.74e-18 | 79.7 |
| MS.gene073163.t1 | AT3G17070 | 31.418 | 261 | 119 | 12 | 1 | 206 | 84 | 339 | 1.47e-17 | 79.7 |
| MS.gene073163.t1 | AT2G24800 | 46.341 | 82 | 40 | 1 | 1 | 82 | 77 | 154 | 7.62e-17 | 76.6 |
Find 39 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCAAATTGTCCTCTTTC+TGG | 0.146610 | 2.3:+13969103 | MS.gene073163:CDS |
| TTCTGGTGGTGACACAAATT+TGG | 0.219197 | 2.3:+13969120 | MS.gene073163:CDS |
| GATGACACTTCCACCTTTAC+CGG | 0.277634 | 2.3:+13967595 | MS.gene073163:CDS |
| TGTTGGTTCTCAAGTTTCTT+TGG | 0.288110 | 2.3:+13969246 | MS.gene073163:CDS |
| GTTCTCAAGTTTCTTTGGTT+AGG | 0.293746 | 2.3:+13969251 | MS.gene073163:CDS |
| CAGAAGCTGGTGAAGGGATT+TGG | 0.309796 | 2.3:-13968920 | None:intergenic |
| TTCTCAAGTTTCTTTGGTTA+GGG | 0.349477 | 2.3:+13969252 | MS.gene073163:CDS |
| GTCCTCTCACAGGGACTAAT+GGG | 0.352141 | 2.3:+13969344 | MS.gene073163:CDS |
| AGTCCTCTCACAGGGACTAA+TGG | 0.352884 | 2.3:+13969343 | MS.gene073163:CDS |
| AGGGATCTTGTTGCTAATAA+AGG | 0.362589 | 2.3:+13969190 | MS.gene073163:CDS |
| ATGTGATGGATCAATCTTAT+TGG | 0.376187 | 2.3:+13967573 | MS.gene073163:CDS |
| GTTAGGGCTTATAGTAGAAA+TGG | 0.387567 | 2.3:+13969268 | MS.gene073163:CDS |
| GGGAAATTAGAAAGAATTGC+AGG | 0.409781 | 2.3:+13969365 | MS.gene073163:CDS |
| TAGTTGTTGTCAAAAGTAAC+TGG | 0.428640 | 2.3:-13969163 | None:intergenic |
| AACTAGAGATGGAATAGCTC+TGG | 0.501934 | 2.3:+13967741 | MS.gene073163:CDS |
| CCCTCATGGGTAGTACCACT+TGG | 0.511184 | 2.3:+13968856 | MS.gene073163:CDS |
| TTTGAAACATTTAGTGAGTG+TGG | 0.512634 | 2.3:-13968949 | None:intergenic |
| AAGAGACTTTGCTGTTGCTA+TGG | 0.520915 | 2.3:+13969303 | MS.gene073163:CDS |
| CTAGCACTTGCAACTAGAGA+TGG | 0.521717 | 2.3:+13967730 | MS.gene073163:CDS |
| AATTAATTTATATAGCTTGG+AGG | 0.537880 | 2.3:+13968832 | MS.gene073163:intron |
| TTTGCAAGAAGCTTCAACAC+TGG | 0.540754 | 2.3:-13967683 | None:intergenic |
| CTTGCATCTCTTCTTCCAAG+TGG | 0.553652 | 2.3:-13968871 | None:intergenic |
| TATAGCTTGGAGGACCCTCA+TGG | 0.556831 | 2.3:+13968842 | MS.gene073163:intron |
| TTTGTGTCACCACCAGAAAG+AGG | 0.559647 | 2.3:-13969115 | None:intergenic |
| AGTAGAATTAGTCCTCTCAC+AGG | 0.564035 | 2.3:+13969334 | MS.gene073163:CDS |
| GATAGGTCAGAAGCTGGTGA+AGG | 0.571185 | 2.3:-13968927 | None:intergenic |
| CACTAAATGTTTCAAAACAA+AGG | 0.573001 | 2.3:+13968956 | MS.gene073163:CDS |
| GCAAATTGTCCTCTTTCTGG+TGG | 0.573877 | 2.3:+13969106 | MS.gene073163:CDS |
| AACATTTAGTGAGTGTGGAT+AGG | 0.592477 | 2.3:-13968944 | None:intergenic |
| TCCCCATTAGTCCCTGTGAG+AGG | 0.604797 | 2.3:-13969346 | None:intergenic |
| ATAGCTTGGAGGACCCTCAT+GGG | 0.605201 | 2.3:+13968843 | MS.gene073163:intron |
| CCAAGTGGTACTACCCATGA+GGG | 0.635598 | 2.3:-13968856 | None:intergenic |
| ATAGGTCAGAAGCTGGTGAA+GGG | 0.643236 | 2.3:-13968926 | None:intergenic |
| TCCAAGTGGTACTACCCATG+AGG | 0.651245 | 2.3:-13968857 | None:intergenic |
| AGTGTGGATAGGTCAGAAGC+TGG | 0.662213 | 2.3:-13968933 | None:intergenic |
| AATATCAGCACAAGAGACAG+TGG | 0.665482 | 2.3:-13967707 | None:intergenic |
| GTAGAATTAGTCCTCTCACA+GGG | 0.677991 | 2.3:+13969335 | MS.gene073163:CDS |
| TCCTCTCACAGGGACTAATG+GGG | 0.683490 | 2.3:+13969345 | MS.gene073163:CDS |
| ACTGGAGAGACAGAATCAAG+AGG | 0.693800 | 2.3:-13969145 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATTAAATTTAACATATAA+GGG | - | chr2.3:13968517-13968536 | None:intergenic | 10.0% |
| !! | TCAATAAAATTAATTAAAGT+GGG | - | chr2.3:13968345-13968364 | None:intergenic | 10.0% |
| !! | TGAATTAAATTTAACATATA+AGG | - | chr2.3:13968518-13968537 | None:intergenic | 10.0% |
| !! | TTCAATAAAATTAATTAAAG+TGG | - | chr2.3:13968346-13968365 | None:intergenic | 10.0% |
| !!! | TTTTATATTCATTATTGTTA+TGG | + | chr2.3:13968744-13968763 | MS.gene073163:intron | 10.0% |
| !! | ATATAAATTAATTGAAACCA+TGG | - | chr2.3:13968825-13968844 | None:intergenic | 15.0% |
| !! | TTCAATTAATTTATATAGCT+TGG | + | chr2.3:13968829-13968848 | MS.gene073163:intron | 15.0% |
| !!! | TTTTCTTATCATATTGTTTT+TGG | + | chr2.3:13967941-13967960 | MS.gene073163:intron | 15.0% |
| !! | AATTAATTTATATAGCTTGG+AGG | + | chr2.3:13968832-13968851 | MS.gene073163:intron | 20.0% |
| !! | ATAAAAAATGAAGAGAGAAA+TGG | - | chr2.3:13967775-13967794 | None:intergenic | 20.0% |
| !! | CTCATTCATTATACTAAAAA+AGG | + | chr2.3:13968192-13968211 | MS.gene073163:intron | 20.0% |
| !! | TAAAAAATGAAGAGAGAAAT+GGG | - | chr2.3:13967774-13967793 | None:intergenic | 20.0% |
| !!! | TCATGTTTTACATAGAAATA+AGG | - | chr2.3:13968611-13968630 | None:intergenic | 20.0% |
| ! | ACATAGTTAGGGAAATTTAT+AGG | - | chr2.3:13968641-13968660 | None:intergenic | 25.0% |
| ! | ATTGTAATCATACAATTCTC+CGG | + | chr2.3:13967885-13967904 | MS.gene073163:intron | 25.0% |
| ! | CACTAAATGTTTCAAAACAA+AGG | + | chr2.3:13968956-13968975 | MS.gene073163:CDS | 25.0% |
| ! | GGCATAAAAAATCTTTAAAC+CGG | + | chr2.3:13968449-13968468 | MS.gene073163:intron | 25.0% |
| ! | TGAATCTCAATAATTAACCA+TGG | + | chr2.3:13968805-13968824 | MS.gene073163:intron | 25.0% |
| ! | TTTCATTGTATATGCGATTT+CGG | - | chr2.3:13969051-13969070 | None:intergenic | 25.0% |
| !! | ACTTTTCTCACATATAATTG+AGG | + | chr2.3:13968007-13968026 | MS.gene073163:intron | 25.0% |
| !! | AGATATATATCTAGCTTATC+TGG | - | chr2.3:13968071-13968090 | None:intergenic | 25.0% |
| !! | CTTTTCTCACATATAATTGA+GGG | + | chr2.3:13968008-13968027 | MS.gene073163:intron | 25.0% |
| !! | TAAGTTTGATGACATAGTTA+GGG | - | chr2.3:13968652-13968671 | None:intergenic | 25.0% |
| !! | TTTTGACAACAACTACTATA+GGG | + | chr2.3:13969171-13969190 | MS.gene073163:CDS | 25.0% |
| !!! | ATTATTTTGTGACAAACGAA+AGG | + | chr2.3:13967811-13967830 | MS.gene073163:intron | 25.0% |
| !!! | TTAAAGATTTTTTATGCCCT+GGG | - | chr2.3:13968447-13968466 | None:intergenic | 25.0% |
| !!! | TTTAAAGATTTTTTATGCCC+TGG | - | chr2.3:13968448-13968467 | None:intergenic | 25.0% |
| ACCTAACAAAAATTCAGCTA+GGG | + | chr2.3:13967633-13967652 | MS.gene073163:CDS | 30.0% | |
| GAAAAGTTAAGAAGAGAAAG+TGG | - | chr2.3:13967994-13968013 | None:intergenic | 30.0% | |
| TAACTCTTGTCGTTCTATAT+GGG | + | chr2.3:13968040-13968059 | MS.gene073163:intron | 30.0% | |
| TAGTTGTTGTCAAAAGTAAC+TGG | - | chr2.3:13969166-13969185 | None:intergenic | 30.0% | |
| TCAGTCAAACCTTAAGTTAA+GGG | + | chr2.3:13968261-13968280 | MS.gene073163:intron | 30.0% | |
| TTAACTCTTGTCGTTCTATA+TGG | + | chr2.3:13968039-13968058 | MS.gene073163:intron | 30.0% | |
| TTCAGTCAAACCTTAAGTTA+AGG | + | chr2.3:13968260-13968279 | MS.gene073163:intron | 30.0% | |
| TTCTCAAGTTTCTTTGGTTA+GGG | + | chr2.3:13969252-13969271 | MS.gene073163:CDS | 30.0% | |
| ! | CTTTTGACAACAACTACTAT+AGG | + | chr2.3:13969170-13969189 | MS.gene073163:CDS | 30.0% |
| ! | GTAAGTTTGATGACATAGTT+AGG | - | chr2.3:13968653-13968672 | None:intergenic | 30.0% |
| ! | TATATATCTAGCTTATCTGG+AGG | - | chr2.3:13968068-13968087 | None:intergenic | 30.0% |
| ! | TTTGAAACATTTAGTGAGTG+TGG | - | chr2.3:13968952-13968971 | None:intergenic | 30.0% |
| !! | AGGACAATTTGCTTTTCTTA+AGG | - | chr2.3:13969098-13969117 | None:intergenic | 30.0% |
| !! | ATGTGATGGATCAATCTTAT+TGG | + | chr2.3:13967573-13967592 | MS.gene073163:CDS | 30.0% |
| !! | ATTTTGATGCCCTTAACTTA+AGG | - | chr2.3:13968273-13968292 | None:intergenic | 30.0% |
| AAAGCAAATTGTCCTCTTTC+TGG | + | chr2.3:13969103-13969122 | MS.gene073163:CDS | 35.0% | |
| AACATTTAGTGAGTGTGGAT+AGG | - | chr2.3:13968947-13968966 | None:intergenic | 35.0% | |
| AACTCTTGTCGTTCTATATG+GGG | + | chr2.3:13968041-13968060 | MS.gene073163:intron | 35.0% | |
| AAGTTAAGAAGAGAAAGTGG+CGG | - | chr2.3:13967991-13968010 | None:intergenic | 35.0% | |
| AATTGCAGGCTTGTGAATTA+AGG | + | chr2.3:13969379-13969398 | MS.gene073163:CDS | 35.0% | |
| AGGGATCTTGTTGCTAATAA+AGG | + | chr2.3:13969190-13969209 | MS.gene073163:CDS | 35.0% | |
| CACCTAACAAAAATTCAGCT+AGG | + | chr2.3:13967632-13967651 | MS.gene073163:CDS | 35.0% | |
| CCTAACAAAAATTCAGCTAG+GGG | + | chr2.3:13967634-13967653 | MS.gene073163:CDS | 35.0% | |
| GGAAAAATTGACATTCTGCT+TGG | - | chr2.3:13969030-13969049 | None:intergenic | 35.0% | |
| GGGAAATTAGAAAGAATTGC+AGG | + | chr2.3:13969365-13969384 | MS.gene073163:CDS | 35.0% | |
| GTCATCTTGATAAAGAGAGA+TGG | - | chr2.3:13968155-13968174 | None:intergenic | 35.0% | |
| GTTAGGGCTTATAGTAGAAA+TGG | + | chr2.3:13969268-13969287 | MS.gene073163:CDS | 35.0% | |
| GTTCTCAAGTTTCTTTGGTT+AGG | + | chr2.3:13969251-13969270 | MS.gene073163:CDS | 35.0% | |
| TGCAAAGTTTGTGTCAATGT+TGG | - | chr2.3:13969074-13969093 | None:intergenic | 35.0% | |
| ! | AAAAATCTTTAAACCGGCTC+TGG | + | chr2.3:13968455-13968474 | MS.gene073163:intron | 35.0% |
| ! | AAAATCTTTAAACCGGCTCT+GGG | + | chr2.3:13968456-13968475 | MS.gene073163:intron | 35.0% |
| ! | AGCTGAATTTTTGTTAGGTG+CGG | - | chr2.3:13967632-13967651 | None:intergenic | 35.0% |
| ! | TCTGATCAAGCTCTTTTCAA+TGG | + | chr2.3:13969223-13969242 | MS.gene073163:CDS | 35.0% |
| !! | TGTTGGTTCTCAAGTTTCTT+TGG | + | chr2.3:13969246-13969265 | MS.gene073163:CDS | 35.0% |
| !!! | AGCTTCAACACTGGTTTTAA+TGG | - | chr2.3:13967677-13967696 | None:intergenic | 35.0% |
| AACTAGAGATGGAATAGCTC+TGG | + | chr2.3:13967741-13967760 | MS.gene073163:CDS | 40.0% | |
| AATATCAGCACAAGAGACAG+TGG | - | chr2.3:13967710-13967729 | None:intergenic | 40.0% | |
| ACATCCAAATAATACGCCCA+GGG | + | chr2.3:13968428-13968447 | MS.gene073163:intron | 40.0% | |
| AGTAGAATTAGTCCTCTCAC+AGG | + | chr2.3:13969334-13969353 | MS.gene073163:CDS | 40.0% | |
| GAGAGATGGTTGACAAAAAC+TGG | - | chr2.3:13968141-13968160 | None:intergenic | 40.0% | |
| GTAGAATTAGTCCTCTCACA+GGG | + | chr2.3:13969335-13969354 | MS.gene073163:CDS | 40.0% | |
| GTTACCATCTTGAGAATGAC+CGG | - | chr2.3:13967907-13967926 | None:intergenic | 40.0% | |
| TTTGCAAGAAGCTTCAACAC+TGG | - | chr2.3:13967686-13967705 | None:intergenic | 40.0% | |
| ! | ATTTTTCTCACCGGTAAAGG+TGG | - | chr2.3:13967608-13967627 | None:intergenic | 40.0% |
| ! | CAAGCTCTTTTCAATGGTGT+TGG | + | chr2.3:13969229-13969248 | MS.gene073163:CDS | 40.0% |
| ! | CCCCTAGCTGAATTTTTGTT+AGG | - | chr2.3:13967637-13967656 | None:intergenic | 40.0% |
| ! | TTCTGGTGGTGACACAAATT+TGG | + | chr2.3:13969120-13969139 | MS.gene073163:CDS | 40.0% |
| !! | AAGAGACTTTGCTGTTGCTA+TGG | + | chr2.3:13969303-13969322 | MS.gene073163:CDS | 40.0% |
| ACTGGAGAGACAGAATCAAG+AGG | - | chr2.3:13969148-13969167 | None:intergenic | 45.0% | |
| AGAGACCTTACAGTCCTTTC+TGG | + | chr2.3:13968989-13969008 | MS.gene073163:intron | 45.0% | |
| ATAGGTCAGAAGCTGGTGAA+GGG | - | chr2.3:13968929-13968948 | None:intergenic | 45.0% | |
| CTAGCACTTGCAACTAGAGA+TGG | + | chr2.3:13967730-13967749 | MS.gene073163:CDS | 45.0% | |
| CTTGCATCTCTTCTTCCAAG+TGG | - | chr2.3:13968874-13968893 | None:intergenic | 45.0% | |
| GACATCCAAATAATACGCCC+AGG | + | chr2.3:13968427-13968446 | MS.gene073163:intron | 45.0% | |
| GATGACACTTCCACCTTTAC+CGG | + | chr2.3:13967595-13967614 | MS.gene073163:CDS | 45.0% | |
| GCAAATTGTCCTCTTTCTGG+TGG | + | chr2.3:13969106-13969125 | MS.gene073163:CDS | 45.0% | |
| TATGCCCTGGGCGTATTATT+TGG | - | chr2.3:13968435-13968454 | None:intergenic | 45.0% | |
| TTCTCCGGTCATTCTCAAGA+TGG | + | chr2.3:13967900-13967919 | MS.gene073163:intron | 45.0% | |
| TTGACATTCTGCTTGGCCTA+TGG | - | chr2.3:13969023-13969042 | None:intergenic | 45.0% | |
| TTTGTGTCACCACCAGAAAG+AGG | - | chr2.3:13969118-13969137 | None:intergenic | 45.0% | |
| ! | GGCATTTTTCTCACCGGTAA+AGG | - | chr2.3:13967611-13967630 | None:intergenic | 45.0% |
| AGTCCTCTCACAGGGACTAA+TGG | + | chr2.3:13969343-13969362 | MS.gene073163:CDS | 50.0% | |
| AGTGTGGATAGGTCAGAAGC+TGG | - | chr2.3:13968936-13968955 | None:intergenic | 50.0% | |
| ATAGCTTGGAGGACCCTCAT+GGG | + | chr2.3:13968843-13968862 | MS.gene073163:intron | 50.0% | |
| CAGAAGCTGGTGAAGGGATT+TGG | - | chr2.3:13968923-13968942 | None:intergenic | 50.0% | |
| CCAAGTGGTACTACCCATGA+GGG | - | chr2.3:13968859-13968878 | None:intergenic | 50.0% | |
| CTATGGTGTGTGCACCAGAA+AGG | - | chr2.3:13969006-13969025 | None:intergenic | 50.0% | |
| GATAGGTCAGAAGCTGGTGA+AGG | - | chr2.3:13968930-13968949 | None:intergenic | 50.0% | |
| GTCCTCTCACAGGGACTAAT+GGG | + | chr2.3:13969344-13969363 | MS.gene073163:CDS | 50.0% | |
| GTGCACCAGAAAGGACTGTA+AGG | - | chr2.3:13968997-13969016 | None:intergenic | 50.0% | |
| TATAGCTTGGAGGACCCTCA+TGG | + | chr2.3:13968842-13968861 | MS.gene073163:intron | 50.0% | |
| TCCAAGTGGTACTACCCATG+AGG | - | chr2.3:13968860-13968879 | None:intergenic | 50.0% | |
| TCCTCTCACAGGGACTAATG+GGG | + | chr2.3:13969345-13969364 | MS.gene073163:CDS | 50.0% | |
| ! | AGGTGCGGCATTTTTCTCAC+CGG | - | chr2.3:13967617-13967636 | None:intergenic | 50.0% |
| ! | CTTTCTGGTGCACACACCAT+AGG | + | chr2.3:13969004-13969023 | MS.gene073163:intron | 50.0% |
| !! | AGAAAGTGGCGGACATGGTT+TGG | - | chr2.3:13967980-13967999 | None:intergenic | 50.0% |
| !! | AGAAGAGAAAGTGGCGGACA+TGG | - | chr2.3:13967985-13968004 | None:intergenic | 50.0% |
| CCCTCATGGGTAGTACCACT+TGG | + | chr2.3:13968856-13968875 | MS.gene073163:CDS | 55.0% | |
| CCTGATACTTCACCCAGAGC+CGG | - | chr2.3:13968471-13968490 | None:intergenic | 55.0% | |
| TCCCCATTAGTCCCTGTGAG+AGG | - | chr2.3:13969349-13969368 | None:intergenic | 55.0% | |
| ! | GCTCTGGGTGAAGTATCAGG+TGG | + | chr2.3:13968471-13968490 | MS.gene073163:intron | 55.0% |
| !! | CCGGCTCTGGGTGAAGTATC+AGG | + | chr2.3:13968468-13968487 | MS.gene073163:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 13967571 | 13969399 | 13967571 | ID=MS.gene073163 |
| chr2.3 | mRNA | 13967571 | 13969399 | 13967571 | ID=MS.gene073163.t1;Parent=MS.gene073163 |
| chr2.3 | exon | 13967571 | 13967762 | 13967571 | ID=MS.gene073163.t1.exon1;Parent=MS.gene073163.t1 |
| chr2.3 | CDS | 13967571 | 13967762 | 13967571 | ID=cds.MS.gene073163.t1;Parent=MS.gene073163.t1 |
| chr2.3 | exon | 13968847 | 13968977 | 13968847 | ID=MS.gene073163.t1.exon2;Parent=MS.gene073163.t1 |
| chr2.3 | CDS | 13968847 | 13968977 | 13968847 | ID=cds.MS.gene073163.t1;Parent=MS.gene073163.t1 |
| chr2.3 | exon | 13969102 | 13969399 | 13969102 | ID=MS.gene073163.t1.exon3;Parent=MS.gene073163.t1 |
| chr2.3 | CDS | 13969102 | 13969399 | 13969102 | ID=cds.MS.gene073163.t1;Parent=MS.gene073163.t1 |
| Gene Sequence |
| Protein sequence |
