Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073610.t1 | XP_013467371.1 | 99.7 | 330 | 1 | 0 | 1 | 330 | 1 | 330 | 1.30E-191 | 678.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073610.t1 | P49730 | 85.5 | 330 | 47 | 1 | 1 | 330 | 1 | 329 | 2.4e-165 | 582.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073610.t1 | A0A072VJ25 | 99.7 | 330 | 1 | 0 | 1 | 330 | 1 | 330 | 9.7e-192 | 678.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene073610 | 0.833063 | 6.61E-56 | -1.69E-46 |
| MS.gene052367 | MS.gene073610 | 0.818346 | 2.06E-52 | -1.69E-46 |
| MS.gene053173 | MS.gene073610 | 0.820228 | 7.67E-53 | -1.69E-46 |
| MS.gene053348 | MS.gene073610 | 0.817086 | 3.96E-52 | -1.69E-46 |
| MS.gene053416 | MS.gene073610 | 0.833295 | 5.79E-56 | -1.69E-46 |
| MS.gene053417 | MS.gene073610 | 0.831467 | 1.64E-55 | -1.69E-46 |
| MS.gene054551 | MS.gene073610 | 0.823799 | 1.14E-53 | -1.69E-46 |
| MS.gene054593 | MS.gene073610 | 0.814176 | 1.76E-51 | -1.69E-46 |
| MS.gene055308 | MS.gene073610 | 0.827538 | 1.48E-54 | -1.69E-46 |
| MS.gene055957 | MS.gene073610 | 0.800762 | 1.24E-48 | -1.69E-46 |
| MS.gene056041 | MS.gene073610 | 0.834762 | 2.49E-56 | -1.69E-46 |
| MS.gene05640 | MS.gene073610 | 0.832838 | 7.52E-56 | -1.69E-46 |
| MS.gene056526 | MS.gene073610 | 0.800757 | 1.24E-48 | -1.69E-46 |
| MS.gene057458 | MS.gene073610 | 0.801245 | 9.86E-49 | -1.69E-46 |
| MS.gene059553 | MS.gene073610 | 0.827108 | 1.88E-54 | -1.69E-46 |
| MS.gene060473 | MS.gene073610 | 0.831102 | 2.02E-55 | -1.69E-46 |
| MS.gene060565 | MS.gene073610 | 0.838508 | 2.76E-57 | -1.69E-46 |
| MS.gene06093 | MS.gene073610 | 0.835161 | 1.97E-56 | -1.69E-46 |
| MS.gene061099 | MS.gene073610 | 0.804363 | 2.24E-49 | -1.69E-46 |
| MS.gene061260 | MS.gene073610 | 0.811593 | 6.48E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37310 | MS.gene073610 | PPI |
| MS.gene026793 | MS.gene073610 | PPI |
| MS.gene073610 | MS.gene034044 | PPI |
| MS.gene073610 | MS.gene034046 | PPI |
| MS.gene79484 | MS.gene073610 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073610.t1 | MTR_1g050472 | 99.697 | 330 | 1 | 0 | 1 | 330 | 1 | 330 | 0.0 | 679 |
| MS.gene073610.t1 | MTR_0268s0080 | 97.273 | 330 | 9 | 0 | 1 | 330 | 1 | 330 | 0.0 | 670 |
| MS.gene073610.t1 | MTR_7g029110 | 96.364 | 330 | 12 | 0 | 1 | 330 | 1 | 330 | 0.0 | 663 |
| MS.gene073610.t1 | MTR_8g469010 | 92.727 | 330 | 19 | 1 | 1 | 330 | 1 | 325 | 0.0 | 635 |
| MS.gene073610.t1 | MTR_4g117370 | 76.615 | 325 | 75 | 1 | 6 | 330 | 18 | 341 | 0.0 | 534 |
| MS.gene073610.t1 | MTR_6g005270 | 67.442 | 43 | 14 | 0 | 265 | 307 | 25 | 67 | 1.58e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073610.t1 | AT3G27060 | 83.735 | 332 | 52 | 2 | 1 | 330 | 1 | 332 | 0.0 | 558 |
| MS.gene073610.t1 | AT3G23580 | 76.308 | 325 | 76 | 1 | 6 | 330 | 18 | 341 | 0.0 | 518 |
Find 65 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGCGTTGGTTGGGATGAA+TGG | 0.235467 | 1.1:+34647958 | MS.gene073610:CDS |
| TGCAGAATCGGTCTGGGTTT+GGG | 0.237047 | 1.1:-34647255 | None:intergenic |
| CGCTTCCTTGCGCGTTGGTT+GGG | 0.274299 | 1.1:+34647950 | MS.gene073610:CDS |
| GTTTGTTGCTGATAGGTTAT+TGG | 0.303774 | 1.1:+34648005 | MS.gene073610:CDS |
| GGGGCAAGAAGGGGTTCTTC+TGG | 0.330658 | 1.1:-34647235 | None:intergenic |
| GCGCGTTGGTTGGGATGAAT+GGG | 0.334497 | 1.1:+34647959 | MS.gene073610:CDS |
| ATGCAGAATCGGTCTGGGTT+TGG | 0.338926 | 1.1:-34647256 | None:intergenic |
| AAGCTGATTGGGCGATGAAA+TGG | 0.368850 | 1.1:+34647650 | MS.gene073610:CDS |
| GCGCTTCCTTGCGCGTTGGT+TGG | 0.370769 | 1.1:+34647949 | MS.gene073610:CDS |
| TTTGTTGCTGATAGGTTATT+GGG | 0.379609 | 1.1:+34648006 | MS.gene073610:CDS |
| ATGTTCAGAATCCGTTTGAT+TGG | 0.390491 | 1.1:+34648055 | MS.gene073610:CDS |
| ACCGTAGAAGGCACGTGCTT+CGG | 0.402800 | 1.1:-34647500 | None:intergenic |
| GTCTGGGTTTGGGGCAAGAA+GGG | 0.415976 | 1.1:-34647245 | None:intergenic |
| GGGAACATGCAGAATCGGTC+TGG | 0.418807 | 1.1:-34647262 | None:intergenic |
| GATTTCTTTCATGAATCTAC+CGG | 0.435670 | 1.1:-34647470 | None:intergenic |
| GTTGCATTTGCTTGTGTTGA+AGG | 0.436600 | 1.1:+34647706 | MS.gene073610:CDS |
| GAGCTTATTTCACGCGATGA+AGG | 0.439919 | 1.1:+34647808 | MS.gene073610:CDS |
| TCTGTTATGAATAGCTTGAA+TGG | 0.443380 | 1.1:+34648147 | MS.gene073610:CDS |
| TCAGAATCCGTTTGATTGGA+TGG | 0.443597 | 1.1:+34648059 | MS.gene073610:CDS |
| TCTGGGTTTGGGGCAAGAAG+GGG | 0.444554 | 1.1:-34647244 | None:intergenic |
| AGGCACGTGCTTCGGAGACT+TGG | 0.444676 | 1.1:-34647492 | None:intergenic |
| GCCGTCAGAGGCGGCGAAGA+AGG | 0.447235 | 1.1:-34647428 | None:intergenic |
| TGCAATCTGGAAACCGTAGA+AGG | 0.456220 | 1.1:-34647512 | None:intergenic |
| GAAAATCGCACAGAAGCTTC+CGG | 0.456616 | 1.1:-34647740 | None:intergenic |
| TCAGCTTTCTTCGCGATACA+TGG | 0.459296 | 1.1:-34647634 | None:intergenic |
| AATCGCTTATATACGTTTCG+AGG | 0.468396 | 1.1:-34647570 | None:intergenic |
| ATGGAATTGATTTCGCTTCA+AGG | 0.479094 | 1.1:+34648078 | MS.gene073610:CDS |
| ATCAATTCCATCCAATCAAA+CGG | 0.480364 | 1.1:-34648066 | None:intergenic |
| TCCGAAGCACGTGCCTTCTA+CGG | 0.485174 | 1.1:+34647499 | MS.gene073610:CDS |
| GATAGGTTATTGGGTGAGCT+TGG | 0.486660 | 1.1:+34648015 | MS.gene073610:CDS |
| TGAAATAAGCTCGTTTGAGA+AGG | 0.487505 | 1.1:-34647797 | None:intergenic |
| GGAACATGCAGAATCGGTCT+GGG | 0.489835 | 1.1:-34647261 | None:intergenic |
| ATATTGAGTTTGTTGCTGAT+AGG | 0.493329 | 1.1:+34647998 | MS.gene073610:CDS |
| GCCTTCTTCGCCGCCTCTGA+CGG | 0.496560 | 1.1:+34647427 | MS.gene073610:CDS |
| CGCGTTGGTTGGGATGAATG+GGG | 0.498034 | 1.1:+34647960 | MS.gene073610:CDS |
| GGAGGAAAGATCGACTTCTT+CGG | 0.499480 | 1.1:-34647344 | None:intergenic |
| GTGATGCTGTTGAAATTGAA+AGG | 0.499878 | 1.1:+34647911 | MS.gene073610:CDS |
| TATCGCGAAGAAAGCTGATT+GGG | 0.501737 | 1.1:+34647639 | MS.gene073610:CDS |
| AGGGGTTCTTCTGGAAAAGC+AGG | 0.505225 | 1.1:-34647226 | None:intergenic |
| GGGTGAGCTTGGTTGTGAAA+AGG | 0.505349 | 1.1:+34648026 | MS.gene073610:CDS |
| GGCGGTCCAGAATGAAGCTT+CGG | 0.505885 | 1.1:-34647323 | None:intergenic |
| GGTCTGGGTTTGGGGCAAGA+AGG | 0.509820 | 1.1:-34647246 | None:intergenic |
| TGGAATTGATTTCGCTTCAA+GGG | 0.520571 | 1.1:+34648079 | MS.gene073610:CDS |
| GTATCGCGAAGAAAGCTGAT+TGG | 0.521675 | 1.1:+34647638 | MS.gene073610:CDS |
| GGATTGGGAACATGCAGAAT+CGG | 0.521690 | 1.1:-34647267 | None:intergenic |
| GCAGAATCGGTCTGGGTTTG+GGG | 0.524980 | 1.1:-34647254 | None:intergenic |
| TGATGCTGTTGAAATTGAAA+GGG | 0.545948 | 1.1:+34647912 | MS.gene073610:CDS |
| ATGAATAGCTTGAATGGTAA+TGG | 0.546534 | 1.1:+34648153 | MS.gene073610:CDS |
| TTTCCTCCGATCTCAAGCAC+TGG | 0.566756 | 1.1:+34647359 | MS.gene073610:CDS |
| CGAGGACGTGAGAGATGAAG+TGG | 0.584744 | 1.1:-34647405 | None:intergenic |
| TTCATCCCAACCAACGCGCA+AGG | 0.586445 | 1.1:-34647955 | None:intergenic |
| TCGTTTGAGAAGGTTAATCC+CGG | 0.587906 | 1.1:-34647787 | None:intergenic |
| CAGAGGCGGCGAAGAAGGCG+AGG | 0.590500 | 1.1:-34647423 | None:intergenic |
| GCGTTGGTTGGGATGAATGG+GGG | 0.596821 | 1.1:+34647961 | MS.gene073610:CDS |
| GATGAAGTGGCGTTCGCCGT+CGG | 0.597991 | 1.1:-34647392 | None:intergenic |
| TTGCCAGTGCTTGAGATCGG+AGG | 0.610798 | 1.1:-34647362 | None:intergenic |
| TTCGAGGACGATGCCGTCAG+AGG | 0.611655 | 1.1:-34647440 | None:intergenic |
| GAGGACGATGCCGTCAGAGG+CGG | 0.612579 | 1.1:-34647437 | None:intergenic |
| GCTAAGTTCAGAGCGCGTGA+AGG | 0.615081 | 1.1:+34647879 | MS.gene073610:CDS |
| TGACGCGCTTCCTTGCGCGT+TGG | 0.621614 | 1.1:+34647945 | MS.gene073610:CDS |
| CACTGGCAAAACCTCACCGA+CGG | 0.624263 | 1.1:+34647376 | MS.gene073610:CDS |
| AGTGGCGTTCGCCGTCGGTG+AGG | 0.626000 | 1.1:-34647387 | None:intergenic |
| ATCGTCCTCGAAAATCTCGC+CGG | 0.639774 | 1.1:+34647451 | MS.gene073610:CDS |
| GGAAAGATCGACTTCTTCGG+CGG | 0.687608 | 1.1:-34647341 | None:intergenic |
| GAAGAGAGTACATCTCAGAG+TGG | 0.694344 | 1.1:-34647546 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AATCCAATACCCAAAAATCT+GGG | + | chr1.1:34647285-34647304 | MS.gene073610:CDS | 30.0% | |
| ATCAATTCCATCCAATCAAA+CGG | - | chr1.1:34648069-34648088 | None:intergenic | 30.0% | |
| ATGAATAGCTTGAATGGTAA+TGG | + | chr1.1:34648153-34648172 | MS.gene073610:CDS | 30.0% | |
| GATTTCTTTCATGAATCTAC+CGG | - | chr1.1:34647473-34647492 | None:intergenic | 30.0% | |
| TCTGTTATGAATAGCTTGAA+TGG | + | chr1.1:34648147-34648166 | MS.gene073610:CDS | 30.0% | |
| TGATGCTGTTGAAATTGAAA+GGG | + | chr1.1:34647912-34647931 | MS.gene073610:CDS | 30.0% | |
| TTTGTTGCTGATAGGTTATT+GGG | + | chr1.1:34648006-34648025 | MS.gene073610:CDS | 30.0% | |
| ! | TGTACATTTCCCAGATTTTT+GGG | - | chr1.1:34647297-34647316 | None:intergenic | 30.0% |
| ! | TTGTACATTTCCCAGATTTT+TGG | - | chr1.1:34647298-34647317 | None:intergenic | 30.0% |
| !! | ATATTGAGTTTGTTGCTGAT+AGG | + | chr1.1:34647998-34648017 | MS.gene073610:CDS | 30.0% |
| !!! | AGATTTTTGGGTATTGGATT+GGG | - | chr1.1:34647285-34647304 | None:intergenic | 30.0% |
| !!! | ATTTTCTGGTTGAAAAAACG+TGG | + | chr1.1:34647757-34647776 | MS.gene073610:CDS | 30.0% |
| AAAAAACGTGGTTTAATGCC+GGG | + | chr1.1:34647769-34647788 | MS.gene073610:CDS | 35.0% | |
| AATCGCTTATATACGTTTCG+AGG | - | chr1.1:34647573-34647592 | None:intergenic | 35.0% | |
| ATGTTCAGAATCCGTTTGAT+TGG | + | chr1.1:34648055-34648074 | MS.gene073610:CDS | 35.0% | |
| CAATCCAATACCCAAAAATC+TGG | + | chr1.1:34647284-34647303 | MS.gene073610:CDS | 35.0% | |
| GAAAAAACGTGGTTTAATGC+CGG | + | chr1.1:34647768-34647787 | MS.gene073610:CDS | 35.0% | |
| GTGATGCTGTTGAAATTGAA+AGG | + | chr1.1:34647911-34647930 | MS.gene073610:CDS | 35.0% | |
| TGAAATAAGCTCGTTTGAGA+AGG | - | chr1.1:34647800-34647819 | None:intergenic | 35.0% | |
| ! | ATGGAATTGATTTCGCTTCA+AGG | + | chr1.1:34648078-34648097 | MS.gene073610:CDS | 35.0% |
| ! | GGATGTTTTCAATTGCAATC+TGG | - | chr1.1:34647528-34647547 | None:intergenic | 35.0% |
| ! | GTTGAAGGAATCTTTTTCTC+CGG | + | chr1.1:34647721-34647740 | MS.gene073610:CDS | 35.0% |
| ! | GTTTGTTGCTGATAGGTTAT+TGG | + | chr1.1:34648005-34648024 | MS.gene073610:CDS | 35.0% |
| ! | TGGAATTGATTTCGCTTCAA+GGG | + | chr1.1:34648079-34648098 | MS.gene073610:CDS | 35.0% |
| !!! | CAGATTTTTGGGTATTGGAT+TGG | - | chr1.1:34647286-34647305 | None:intergenic | 35.0% |
| !!! | TGCTGATTTTTGCTTCAAGT+TGG | + | chr1.1:34648179-34648198 | MS.gene073610:CDS | 35.0% |
| !!! | TTTCCCAGATTTTTGGGTAT+TGG | - | chr1.1:34647291-34647310 | None:intergenic | 35.0% |
| AAAAAGCCGAAGCTTCATTC+TGG | + | chr1.1:34647317-34647336 | MS.gene073610:CDS | 40.0% | |
| GTTGCATTTGCTTGTGTTGA+AGG | + | chr1.1:34647706-34647725 | MS.gene073610:CDS | 40.0% | |
| TATCGCGAAGAAAGCTGATT+GGG | + | chr1.1:34647639-34647658 | MS.gene073610:CDS | 40.0% | |
| TCAGAATCCGTTTGATTGGA+TGG | + | chr1.1:34648059-34648078 | MS.gene073610:CDS | 40.0% | |
| TCGTTTGAGAAGGTTAATCC+CGG | - | chr1.1:34647790-34647809 | None:intergenic | 40.0% | |
| !!! | AACTTTTTTGAGAAGCGCGT+TGG | + | chr1.1:34648108-34648127 | MS.gene073610:CDS | 40.0% |
| !!! | ACTTTTTTGAGAAGCGCGTT+GGG | + | chr1.1:34648109-34648128 | MS.gene073610:CDS | 40.0% |
| AAGCTGATTGGGCGATGAAA+TGG | + | chr1.1:34647650-34647669 | MS.gene073610:CDS | 45.0% | |
| GAAAATCGCACAGAAGCTTC+CGG | - | chr1.1:34647743-34647762 | None:intergenic | 45.0% | |
| GAGCTTATTTCACGCGATGA+AGG | + | chr1.1:34647808-34647827 | MS.gene073610:CDS | 45.0% | |
| GATAGGTTATTGGGTGAGCT+TGG | + | chr1.1:34648015-34648034 | MS.gene073610:CDS | 45.0% | |
| GGATTGGGAACATGCAGAAT+CGG | - | chr1.1:34647270-34647289 | None:intergenic | 45.0% | |
| GTATCGCGAAGAAAGCTGAT+TGG | + | chr1.1:34647638-34647657 | MS.gene073610:CDS | 45.0% | |
| TCAGCTTTCTTCGCGATACA+TGG | - | chr1.1:34647637-34647656 | None:intergenic | 45.0% | |
| TGCAATCTGGAAACCGTAGA+AGG | - | chr1.1:34647515-34647534 | None:intergenic | 45.0% | |
| ! | GAAGAGAGTACATCTCAGAG+TGG | - | chr1.1:34647549-34647568 | None:intergenic | 45.0% |
| ! | GAAGCTTCTGTGCGATTTTC+TGG | + | chr1.1:34647743-34647762 | MS.gene073610:CDS | 45.0% |
| ! | GGAGGAAAGATCGACTTCTT+CGG | - | chr1.1:34647347-34647366 | None:intergenic | 45.0% |
| ! | GTTTTGCCAGTGCTTGAGAT+CGG | - | chr1.1:34647368-34647387 | None:intergenic | 45.0% |
| !!! | CTTTTTTGAGAAGCGCGTTG+GGG | + | chr1.1:34648110-34648129 | MS.gene073610:CDS | 45.0% |
| ATCGTCCTCGAAAATCTCGC+CGG | + | chr1.1:34647451-34647470 | MS.gene073610:CDS | 50.0% | |
| ATGCAGAATCGGTCTGGGTT+TGG | - | chr1.1:34647259-34647278 | None:intergenic | 50.0% | |
| GGAACATGCAGAATCGGTCT+GGG | - | chr1.1:34647264-34647283 | None:intergenic | 50.0% | |
| GGGTGAGCTTGGTTGTGAAA+AGG | + | chr1.1:34648026-34648045 | MS.gene073610:CDS | 50.0% | |
| TGCAGAATCGGTCTGGGTTT+GGG | - | chr1.1:34647258-34647277 | None:intergenic | 50.0% | |
| TTTCCTCCGATCTCAAGCAC+TGG | + | chr1.1:34647359-34647378 | MS.gene073610:CDS | 50.0% | |
| ! | AGGGGTTCTTCTGGAAAAGC+AGG | - | chr1.1:34647229-34647248 | None:intergenic | 50.0% |
| ! | ATCTACCGGCGAGATTTTCG+AGG | - | chr1.1:34647459-34647478 | None:intergenic | 50.0% |
| ! | GGAAAGATCGACTTCTTCGG+CGG | - | chr1.1:34647344-34647363 | None:intergenic | 50.0% |
| CACTGGCAAAACCTCACCGA+CGG | + | chr1.1:34647376-34647395 | MS.gene073610:CDS | 55.0% | |
| CGAGGACGTGAGAGATGAAG+TGG | - | chr1.1:34647408-34647427 | None:intergenic | 55.0% | |
| GCAGAATCGGTCTGGGTTTG+GGG | - | chr1.1:34647257-34647276 | None:intergenic | 55.0% | |
| GCTAAGTTCAGAGCGCGTGA+AGG | + | chr1.1:34647879-34647898 | MS.gene073610:CDS | 55.0% | |
| GGCGGTCCAGAATGAAGCTT+CGG | - | chr1.1:34647326-34647345 | None:intergenic | 55.0% | |
| GGGAACATGCAGAATCGGTC+TGG | - | chr1.1:34647265-34647284 | None:intergenic | 55.0% | |
| TCCGAAGCACGTGCCTTCTA+CGG | + | chr1.1:34647499-34647518 | MS.gene073610:CDS | 55.0% | |
| TTCATCCCAACCAACGCGCA+AGG | - | chr1.1:34647958-34647977 | None:intergenic | 55.0% | |
| TTGCCAGTGCTTGAGATCGG+AGG | - | chr1.1:34647365-34647384 | None:intergenic | 55.0% | |
| ! | ACCGTAGAAGGCACGTGCTT+CGG | - | chr1.1:34647503-34647522 | None:intergenic | 55.0% |
| ! | GTCTGGGTTTGGGGCAAGAA+GGG | - | chr1.1:34647248-34647267 | None:intergenic | 55.0% |
| ! | TCTGGGTTTGGGGCAAGAAG+GGG | - | chr1.1:34647247-34647266 | None:intergenic | 55.0% |
| !! | CGCGTTGGTTGGGATGAATG+GGG | + | chr1.1:34647960-34647979 | MS.gene073610:CDS | 55.0% |
| !! | GCGCGTTGGTTGGGATGAAT+GGG | + | chr1.1:34647959-34647978 | MS.gene073610:CDS | 55.0% |
| !! | GCGTTGGTTGGGATGAATGG+GGG | + | chr1.1:34647961-34647980 | MS.gene073610:CDS | 55.0% |
| !! | TGCGCGTTGGTTGGGATGAA+TGG | + | chr1.1:34647958-34647977 | MS.gene073610:CDS | 55.0% |
| AGGCACGTGCTTCGGAGACT+TGG | - | chr1.1:34647495-34647514 | None:intergenic | 60.0% | |
| GATGAAGTGGCGTTCGCCGT+CGG | - | chr1.1:34647395-34647414 | None:intergenic | 60.0% | |
| GGGGCAAGAAGGGGTTCTTC+TGG | - | chr1.1:34647238-34647257 | None:intergenic | 60.0% | |
| TTCGAGGACGATGCCGTCAG+AGG | - | chr1.1:34647443-34647462 | None:intergenic | 60.0% | |
| ! | GGTCTGGGTTTGGGGCAAGA+AGG | - | chr1.1:34647249-34647268 | None:intergenic | 60.0% |
| !! | CGCTTCCTTGCGCGTTGGTT+GGG | + | chr1.1:34647950-34647969 | MS.gene073610:CDS | 60.0% |
| GAGGACGATGCCGTCAGAGG+CGG | - | chr1.1:34647440-34647459 | None:intergenic | 65.0% | |
| GCCTTCTTCGCCGCCTCTGA+CGG | + | chr1.1:34647427-34647446 | MS.gene073610:CDS | 65.0% | |
| TGACGCGCTTCCTTGCGCGT+TGG | + | chr1.1:34647945-34647964 | MS.gene073610:CDS | 65.0% | |
| ! | GCGCTTCCTTGCGCGTTGGT+TGG | + | chr1.1:34647949-34647968 | MS.gene073610:CDS | 65.0% |
| AGTGGCGTTCGCCGTCGGTG+AGG | - | chr1.1:34647390-34647409 | None:intergenic | 70.0% | |
| CAGAGGCGGCGAAGAAGGCG+AGG | - | chr1.1:34647426-34647445 | None:intergenic | 70.0% | |
| GCCGTCAGAGGCGGCGAAGA+AGG | - | chr1.1:34647431-34647450 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 34647223 | 34648215 | 34647223 | ID=MS.gene073610 |
| chr1.1 | mRNA | 34647223 | 34648215 | 34647223 | ID=MS.gene073610.t1;Parent=MS.gene073610 |
| chr1.1 | exon | 34647223 | 34648215 | 34647223 | ID=MS.gene073610.t1.exon1;Parent=MS.gene073610.t1 |
| chr1.1 | CDS | 34647223 | 34648215 | 34647223 | ID=cds.MS.gene073610.t1;Parent=MS.gene073610.t1 |
| Gene Sequence |
| Protein sequence |
