Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07479.t1 | XP_013468838.1 | 99 | 414 | 4 | 0 | 1 | 414 | 1 | 414 | 1.70E-244 | 854.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07479.t1 | P14749 | 77.3 | 379 | 86 | 0 | 34 | 412 | 32 | 410 | 1.1e-178 | 627.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07479.t1 | A0A072VXV5 | 99.0 | 414 | 4 | 0 | 1 | 414 | 1 | 414 | 1.2e-244 | 854.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07479 | MS.gene87685 | PPI |
| MS.gene07479 | MS.gene27500 | PPI |
| MS.gene059347 | MS.gene07479 | PPI |
| MS.gene07479 | MS.gene27501 | PPI |
| MS.gene07479 | MS.gene049391 | PPI |
| MS.gene07479 | MS.gene036942 | PPI |
| MS.gene07479 | MS.gene92763 | PPI |
| MS.gene07479 | MS.gene06516 | PPI |
| MS.gene07479 | MS.gene92764 | PPI |
| MS.gene07479 | MS.gene87684 | PPI |
| MS.gene07479 | MS.gene036941 | PPI |
| MS.gene07479 | MS.gene013419 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07479.t1 | MTR_1g077480 | 99.034 | 414 | 4 | 0 | 1 | 414 | 1 | 414 | 0.0 | 848 |
| MS.gene07479.t1 | MTR_6g086625 | 90.821 | 414 | 32 | 2 | 1 | 414 | 1 | 408 | 0.0 | 781 |
| MS.gene07479.t1 | MTR_6g086575 | 87.923 | 414 | 43 | 1 | 1 | 414 | 1 | 407 | 0.0 | 754 |
| MS.gene07479.t1 | MTR_1g077520 | 80.196 | 409 | 76 | 3 | 3 | 411 | 4 | 407 | 0.0 | 694 |
| MS.gene07479.t1 | MTR_6g069140 | 77.062 | 388 | 88 | 1 | 24 | 411 | 33 | 419 | 0.0 | 638 |
| MS.gene07479.t1 | MTR_1g077520 | 79.167 | 336 | 65 | 3 | 3 | 338 | 4 | 334 | 0.0 | 565 |
| MS.gene07479.t1 | MTR_7g073640 | 63.926 | 377 | 134 | 2 | 37 | 411 | 31 | 407 | 0.0 | 521 |
| MS.gene07479.t1 | MTR_7g073650 | 64.420 | 371 | 130 | 2 | 43 | 411 | 36 | 406 | 0.0 | 518 |
| MS.gene07479.t1 | MTR_3g094160 | 63.043 | 368 | 131 | 3 | 48 | 411 | 59 | 425 | 7.24e-176 | 498 |
| MS.gene07479.t1 | MTR_1g078410 | 63.850 | 213 | 25 | 2 | 1 | 213 | 1 | 161 | 1.57e-89 | 269 |
| MS.gene07479.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 291 | 411 | 101 | 223 | 2.47e-39 | 140 |
| MS.gene07479.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 291 | 411 | 185 | 307 | 3.93e-38 | 140 |
| MS.gene07479.t1 | MTR_0279s0030 | 54.472 | 123 | 54 | 2 | 291 | 411 | 250 | 372 | 1.10e-37 | 140 |
| MS.gene07479.t1 | MTR_8g089725 | 24.416 | 471 | 237 | 15 | 58 | 412 | 38 | 505 | 6.63e-26 | 109 |
| MS.gene07479.t1 | MTR_8g089735 | 24.841 | 471 | 235 | 17 | 58 | 412 | 38 | 505 | 4.21e-25 | 107 |
| MS.gene07479.t1 | MTR_2g096530 | 27.221 | 349 | 164 | 12 | 58 | 319 | 40 | 385 | 5.59e-22 | 98.6 |
| MS.gene07479.t1 | MTR_3g086580 | 26.611 | 357 | 168 | 12 | 54 | 319 | 36 | 389 | 5.96e-22 | 98.6 |
| MS.gene07479.t1 | MTR_8g089745 | 25.000 | 348 | 174 | 11 | 58 | 320 | 38 | 383 | 2.58e-20 | 93.2 |
| MS.gene07479.t1 | MTR_8g089740 | 25.485 | 361 | 178 | 12 | 46 | 320 | 24 | 379 | 2.86e-20 | 93.6 |
| MS.gene07479.t1 | MTR_8g089745 | 25.278 | 360 | 179 | 12 | 46 | 320 | 29 | 383 | 4.97e-20 | 92.8 |
| MS.gene07479.t1 | MTR_3g086580 | 30.168 | 179 | 96 | 6 | 168 | 319 | 26 | 202 | 8.75e-14 | 73.2 |
| MS.gene07479.t1 | MTR_3g094180 | 48.611 | 72 | 34 | 1 | 324 | 392 | 7 | 78 | 6.82e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07479.t1 | AT5G08370 | 69.643 | 392 | 118 | 1 | 24 | 414 | 5 | 396 | 0.0 | 590 |
| MS.gene07479.t1 | AT5G08370 | 73.224 | 366 | 98 | 0 | 49 | 414 | 5 | 370 | 0.0 | 588 |
| MS.gene07479.t1 | AT5G08380 | 59.512 | 410 | 155 | 4 | 4 | 411 | 8 | 408 | 0.0 | 512 |
| MS.gene07479.t1 | AT3G56310 | 58.178 | 428 | 162 | 7 | 1 | 412 | 4 | 430 | 4.87e-177 | 501 |
| MS.gene07479.t1 | AT3G56310 | 54.673 | 428 | 153 | 8 | 1 | 412 | 4 | 406 | 1.07e-158 | 454 |
| MS.gene07479.t1 | AT5G08380 | 60.568 | 317 | 117 | 2 | 4 | 320 | 8 | 316 | 9.23e-144 | 412 |
| MS.gene07479.t1 | AT3G26380 | 25.788 | 349 | 169 | 12 | 58 | 319 | 42 | 387 | 3.83e-22 | 98.6 |
| MS.gene07479.t1 | AT3G26380 | 25.788 | 349 | 169 | 12 | 58 | 319 | 42 | 387 | 6.82e-22 | 98.6 |
Find 104 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACTGGCCTTGCTGCTTT+AGG | 0.151894 | 1.2:+63248861 | MS.gene07479:CDS |
| GGGTACAAATATATTAATTT+AGG | 0.200247 | 1.2:+63248882 | MS.gene07479:CDS |
| CTTGCATCAACTATAGTTTC+TGG | 0.211985 | 1.2:-63251140 | None:intergenic |
| TAGTTGATGCAAGAGATTTA+TGG | 0.246206 | 1.2:+63251150 | MS.gene07479:CDS |
| CAACTGGCCTTGCTGCTTTA+GGG | 0.247842 | 1.2:+63248862 | MS.gene07479:CDS |
| ATGCCAAAACATTTGCTTCT+TGG | 0.258381 | 1.2:+63249501 | MS.gene07479:CDS |
| CCAACTATTTCCCACACTTT+TGG | 0.260055 | 1.2:-63249967 | None:intergenic |
| TGGAATAGCTGGAACCATTT+TGG | 0.262090 | 1.2:+63248696 | MS.gene07479:CDS |
| ACAAAGTAGCAGTGGTCTTA+TGG | 0.272566 | 1.2:+63251060 | MS.gene07479:CDS |
| CATTGATATCACAACCAAAA+TGG | 0.277961 | 1.2:-63248710 | None:intergenic |
| ATCGTGCCCATTTCAGCATT+TGG | 0.278804 | 1.2:+63250435 | MS.gene07479:CDS |
| TGCCAAAACATTTGCTTCTT+GGG | 0.296895 | 1.2:+63249502 | MS.gene07479:CDS |
| TCTACAGCTACTCGCTTATT+AGG | 0.307891 | 1.2:+63246723 | MS.gene07479:CDS |
| TCAACACAATCATTGGTTTC+AGG | 0.320896 | 1.2:+63251269 | MS.gene07479:CDS |
| CAGGCGATATAGAAGATAAT+TGG | 0.322906 | 1.2:+63249997 | MS.gene07479:CDS |
| CTAATGCCCAAATGCTGAAA+TGG | 0.353093 | 1.2:-63250442 | None:intergenic |
| AGTTGATGCAAGAGATTTAT+GGG | 0.361924 | 1.2:+63251151 | MS.gene07479:CDS |
| TCGTGCCCATTTCAGCATTT+GGG | 0.362441 | 1.2:+63250436 | MS.gene07479:CDS |
| TTTAATAAAGCTTCACTCAT+TGG | 0.363260 | 1.2:-63249798 | None:intergenic |
| ACAATGATATTAGGGGAATA+TGG | 0.364125 | 1.2:+63249248 | MS.gene07479:intron |
| GAAAAGCAACAATGATTTAG+AGG | 0.374068 | 1.2:+63250774 | MS.gene07479:CDS |
| TACCCAAGAAGCAAATGTTT+TGG | 0.374219 | 1.2:-63249504 | None:intergenic |
| AAGAGTTATATGCTGCAAAA+TGG | 0.375191 | 1.2:+63246789 | MS.gene07479:CDS |
| TAAACGTATGCCTGGATCAT+TGG | 0.378772 | 1.2:+63249463 | MS.gene07479:CDS |
| CAACTATAGTTTCTGGTTCA+AGG | 0.392974 | 1.2:-63251133 | None:intergenic |
| TGTATGTTCTGACACCAAAA+AGG | 0.398154 | 1.2:+63251330 | MS.gene07479:CDS |
| AAATAGGCTCCTCTATTAGT+TGG | 0.398912 | 1.2:+63250557 | MS.gene07479:intron |
| TGAAGGAAACGTTGAAGCCT+TGG | 0.402252 | 1.2:-63249274 | None:intergenic |
| GCAGATAAACTTGGAGTTCA+AGG | 0.405868 | 1.2:+63250742 | MS.gene07479:intron |
| AGAGAAGAAGATCGGCCTTC+CGG | 0.409581 | 1.2:-63249823 | None:intergenic |
| AACGTTTCCTTCAGGAATCA+AGG | 0.411562 | 1.2:+63249284 | MS.gene07479:CDS |
| TTATAGATGCAAACGACAAA+TGG | 0.414952 | 1.2:+63250221 | MS.gene07479:CDS |
| GAAAGTTTAATCCGAGATAC+AGG | 0.426792 | 1.2:+63248732 | MS.gene07479:CDS |
| GTAGCACTCAACACAATCAT+TGG | 0.438786 | 1.2:+63251262 | MS.gene07479:intron |
| CATAGGAAAGGCTTGAAGTT+GGG | 0.440372 | 1.2:+63249324 | MS.gene07479:CDS |
| CTCTAGCTCATTATATTCAT+AGG | 0.449054 | 1.2:+63249307 | MS.gene07479:CDS |
| TGATGATCAGATGGAATAGC+TGG | 0.449121 | 1.2:+63248685 | MS.gene07479:intron |
| GCCGACGCAATGGTGTCAAC+TGG | 0.451138 | 1.2:+63248846 | MS.gene07479:intron |
| TTTCCAACTTCAAGCATGTC+AGG | 0.457946 | 1.2:-63250389 | None:intergenic |
| TTTGGTCATGCAGATAAACT+TGG | 0.458528 | 1.2:+63250733 | MS.gene07479:intron |
| AAACGTATGCCTGGATCATT+GGG | 0.461695 | 1.2:+63249464 | MS.gene07479:CDS |
| GACAAATGGGCATCTTATGC+TGG | 0.464580 | 1.2:+63250235 | MS.gene07479:CDS |
| GATCCTGACATGCTTGAAGT+TGG | 0.469508 | 1.2:+63250386 | MS.gene07479:intron |
| TAATGCCCAAATGCTGAAAT+GGG | 0.470549 | 1.2:-63250441 | None:intergenic |
| GGAAATAGTTGGAGAACAAC+AGG | 0.473859 | 1.2:+63249978 | MS.gene07479:CDS |
| GACATGCTTGAAGTTGGAAA+TGG | 0.481080 | 1.2:+63250392 | MS.gene07479:CDS |
| TTGGGAGTTTATTCAGATGC+CGG | 0.485209 | 1.2:+63249342 | MS.gene07479:CDS |
| CAGCATTTGGGCATTAGCTA+AGG | 0.494033 | 1.2:+63250448 | MS.gene07479:CDS |
| TATGATAATTGTGAAAATAA+CGG | 0.494743 | 1.2:+63249653 | MS.gene07479:CDS |
| AAGGCTTCAACGTTTCCTTC+AGG | 0.495513 | 1.2:+63249276 | MS.gene07479:CDS |
| GAAGTTATTGCAGTAAATCA+AGG | 0.496776 | 1.2:+63250632 | MS.gene07479:CDS |
| TATAGATGCAAACGACAAAT+GGG | 0.498323 | 1.2:+63250222 | MS.gene07479:CDS |
| TCATAGGAAAGGCTTGAAGT+TGG | 0.501081 | 1.2:+63249323 | MS.gene07479:CDS |
| CAATATTCATGAACCCTACA+AGG | 0.501172 | 1.2:-63246686 | None:intergenic |
| TGTGTCCACTCTAGAGAAGA+AGG | 0.510647 | 1.2:+63246764 | MS.gene07479:CDS |
| GAAGGAAACGTTGAAGCCTT+GGG | 0.511297 | 1.2:-63249273 | None:intergenic |
| TATATGCTGCAAAATGGACT+TGG | 0.511789 | 1.2:+63246795 | MS.gene07479:CDS |
| ATGGGAAGATCCTGCAACGT+GGG | 0.517774 | 1.2:+63249944 | MS.gene07479:CDS |
| ATGCAACAGTTACTGCGTCT+TGG | 0.519706 | 1.2:+63251099 | MS.gene07479:CDS |
| ATTTCATGTCCCAATGATCC+AGG | 0.521509 | 1.2:-63249473 | None:intergenic |
| AATAAAGCTTCACTCATTGG+TGG | 0.521866 | 1.2:-63249795 | None:intergenic |
| CCAAAAGTGTGGGAAATAGT+TGG | 0.526021 | 1.2:+63249967 | MS.gene07479:CDS |
| ACTTGTAGTAAACGTATGCC+TGG | 0.526377 | 1.2:+63249455 | MS.gene07479:CDS |
| ACTTGGACGTACTCCTCCCA+TGG | 0.536006 | 1.2:+63246812 | MS.gene07479:CDS |
| ATATTACATCCAACTAATAG+AGG | 0.536794 | 1.2:-63250566 | None:intergenic |
| AAGTGCAATGGCAAAGATAG+TGG | 0.537087 | 1.2:+63246647 | None:intergenic |
| ACGGAATAAGCGTTCGCGAA+AGG | 0.537756 | 1.2:+63249672 | MS.gene07479:CDS |
| TGGGAGTTTATTCAGATGCC+GGG | 0.538487 | 1.2:+63249343 | MS.gene07479:CDS |
| TCTTCTTCTCTATGTGTGAA+TGG | 0.540517 | 1.2:+63249835 | MS.gene07479:CDS |
| TAATTACCATTCCATCCTCC+AGG | 0.541589 | 1.2:-63250259 | None:intergenic |
| GTTGCTTATCAATTCATATG+TGG | 0.544672 | 1.2:-63250606 | None:intergenic |
| CTTATGCTGGACCTGGAGGA+TGG | 0.545149 | 1.2:+63250248 | MS.gene07479:CDS |
| CTTAACCTTCTTCTCTAGAG+TGG | 0.548624 | 1.2:-63246769 | None:intergenic |
| TGGGCATCTTATGCTGGACC+TGG | 0.550800 | 1.2:+63250241 | MS.gene07479:CDS |
| AAGCGAGTAGCTGTAGATGA+TGG | 0.552009 | 1.2:-63246717 | None:intergenic |
| TGCAACGTGGGCCAAAAGTG+TGG | 0.554880 | 1.2:+63249956 | MS.gene07479:CDS |
| TGATAATGATACCTGTATCT+CGG | 0.559350 | 1.2:-63248743 | None:intergenic |
| CTTCTCTAGAGTGGACACAT+TGG | 0.559897 | 1.2:-63246760 | None:intergenic |
| CTACGGTGACAGGTATGGGC+AGG | 0.562492 | 1.2:+63251023 | MS.gene07479:intron |
| TATTATTTCAGCCGACGCAA+TGG | 0.564004 | 1.2:+63248836 | MS.gene07479:intron |
| GCTCATTATATTCATAGGAA+AGG | 0.565444 | 1.2:+63249312 | MS.gene07479:CDS |
| TGGATGTAATATTCAAGCAA+TGG | 0.566327 | 1.2:+63250577 | MS.gene07479:CDS |
| AGTGAAGCTTTATTAAACTC+CGG | 0.574235 | 1.2:+63249804 | MS.gene07479:CDS |
| TTAGGGGAATATGGTTCCCA+AGG | 0.579443 | 1.2:+63249257 | MS.gene07479:intron |
| CTTGGACGTACTCCTCCCAT+GGG | 0.579757 | 1.2:+63246813 | MS.gene07479:CDS |
| GCCAGTTGACACCATTGCGT+CGG | 0.584197 | 1.2:-63248847 | None:intergenic |
| ACTGCGTCTTGGTCTGACAT+AGG | 0.588981 | 1.2:+63251110 | MS.gene07479:CDS |
| GGAACTTAATCGAGACTCAA+AGG | 0.593389 | 1.2:+63249045 | MS.gene07479:CDS |
| ATATAGAAGATAATTGGAAG+AGG | 0.597307 | 1.2:+63250003 | MS.gene07479:CDS |
| GCTGGACCTGGAGGATGGAA+TGG | 0.600529 | 1.2:+63250253 | MS.gene07479:CDS |
| GCAACGTGGGCCAAAAGTGT+GGG | 0.604665 | 1.2:+63249957 | MS.gene07479:CDS |
| AAGCTTTATTAAACTCCGGA+AGG | 0.609339 | 1.2:+63249808 | MS.gene07479:CDS |
| GCTAGAGCCTTGATTCCTGA+AGG | 0.622037 | 1.2:-63249291 | None:intergenic |
| ATGAGGGTAGCTTACCCCAT+GGG | 0.623626 | 1.2:-63246828 | None:intergenic |
| ATGCTTGAAGTTGGAAATGG+AGG | 0.629089 | 1.2:+63250395 | MS.gene07479:CDS |
| TCACACATAGAGAAGAAGAT+CGG | 0.630428 | 1.2:-63249831 | None:intergenic |
| GATGGGAAGATCCTGCAACG+TGG | 0.636522 | 1.2:+63249943 | MS.gene07479:CDS |
| GCATCTTATGCTGGACCTGG+AGG | 0.645529 | 1.2:+63250244 | MS.gene07479:CDS |
| ATTTGTACCCTAAAGCAGCA+AGG | 0.672262 | 1.2:-63248869 | None:intergenic |
| AGGGTAGCTTACCCCATGGG+AGG | 0.673038 | 1.2:-63246825 | None:intergenic |
| TGATGCAAGAGATTTATGGG+AGG | 0.716729 | 1.2:+63251154 | MS.gene07479:CDS |
| ATGGGCACGATATTCCTCTG+TGG | 0.732691 | 1.2:-63250423 | None:intergenic |
| AAATGGAGGCATGACCACAG+AGG | 0.748734 | 1.2:+63250409 | MS.gene07479:CDS |
| TTGGACGTACTCCTCCCATG+GGG | 0.779061 | 1.2:+63246814 | MS.gene07479:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATATTAAACAAATAAAT+GGG | - | chr1.2:63249107-63249126 | None:intergenic | 10.0% |
| !! | AAGTATAAATTAAACAAATT+TGG | + | chr1.2:63247836-63247855 | MS.gene07479:intron | 10.0% |
| !! | ATATAGAAACTAAAAAAAAT+TGG | - | chr1.2:63246881-63246900 | None:intergenic | 10.0% |
| !! | TATATAAATTGAAAATTCTA+TGG | - | chr1.2:63248350-63248369 | None:intergenic | 10.0% |
| !!! | AAAATTATGTTTTTTATTAG+TGG | - | chr1.2:63248288-63248307 | None:intergenic | 10.0% |
| !!! | ATAAGTAAATTTTTTTTTGT+AGG | - | chr1.2:63247525-63247544 | None:intergenic | 10.0% |
| !!! | ATGGTTAATTTTATTTTAAA+AGG | - | chr1.2:63248331-63248350 | None:intergenic | 10.0% |
| !!! | TAAGTAAATTTTTTTTTGTA+GGG | - | chr1.2:63247524-63247543 | None:intergenic | 10.0% |
| !!! | TGGTTAATTTTATTTTAAAA+GGG | - | chr1.2:63248330-63248349 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGCAAAGAAATA+TGG | + | chr1.2:63248104-63248123 | MS.gene07479:intron | 15.0% |
| !! | AAACATTGAAATATCAAAAT+AGG | - | chr1.2:63250136-63250155 | None:intergenic | 15.0% |
| !! | AAAGCTATTAAAATTAAGTA+AGG | - | chr1.2:63247495-63247514 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr1.2:63247908-63247927 | MS.gene07479:intron | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | + | chr1.2:63247717-63247736 | MS.gene07479:intron | 15.0% |
| !! | AGATATTAAACAAATAAATG+GGG | - | chr1.2:63249106-63249125 | None:intergenic | 15.0% |
| !! | CTATAATTTGAAAAATGAAT+GGG | - | chr1.2:63248155-63248174 | None:intergenic | 15.0% |
| !! | GAAGATATTAAACAAATAAA+TGG | - | chr1.2:63249108-63249127 | None:intergenic | 15.0% |
| !! | TATATCATATATATAATCCT+AGG | + | chr1.2:63249578-63249597 | MS.gene07479:intron | 15.0% |
| !! | TATGATAATTGTGAAAATAA+CGG | + | chr1.2:63249653-63249672 | MS.gene07479:CDS | 15.0% |
| !! | TATTATAATTTAAATCTACG+TGG | + | chr1.2:63247065-63247084 | MS.gene07479:intron | 15.0% |
| !! | TCAAACAGAATAAAATATAA+AGG | - | chr1.2:63250817-63250836 | None:intergenic | 15.0% |
| !! | TCTATAATTTGAAAAATGAA+TGG | - | chr1.2:63248156-63248175 | None:intergenic | 15.0% |
| !! | TGAAGTATGAAAAAAAAATT+AGG | - | chr1.2:63250868-63250887 | None:intergenic | 15.0% |
| !! | TTAAAAAACTTAAGAGTTTA+AGG | - | chr1.2:63247586-63247605 | None:intergenic | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | - | chr1.2:63247557-63247576 | None:intergenic | 15.0% |
| !!! | AATGTTTTAAGAAACAAAAT+CGG | + | chr1.2:63246935-63246954 | MS.gene07479:intron | 15.0% |
| !!! | ATTTTTTTTAGATGATTGTT+GGG | + | chr1.2:63249021-63249040 | MS.gene07479:intron | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | - | chr1.2:63247558-63247577 | None:intergenic | 15.0% |
| !!! | TAACTTTTTAAAAAGAGAAA+AGG | + | chr1.2:63247373-63247392 | MS.gene07479:intron | 15.0% |
| !!! | TAATTCTTTTCTAAAATGAA+GGG | + | chr1.2:63249920-63249939 | MS.gene07479:intron | 15.0% |
| !!! | TGAAATTGGTTTTTTTATTA+AGG | + | chr1.2:63248463-63248482 | MS.gene07479:intron | 15.0% |
| !!! | TTAATTCTTTTCTAAAATGA+AGG | + | chr1.2:63249919-63249938 | MS.gene07479:intron | 15.0% |
| !! | AAAAAACCAATTTCATCATT+CGG | - | chr1.2:63248458-63248477 | None:intergenic | 20.0% |
| !! | AAAGTGATTTATAATTTAGG+TGG | + | chr1.2:63248378-63248397 | MS.gene07479:intron | 20.0% |
| !! | ATCTAAGTTGTAAACATAAT+AGG | - | chr1.2:63248782-63248801 | None:intergenic | 20.0% |
| !! | ATGAAAAATAGATAAGAATG+AGG | - | chr1.2:63246848-63246867 | None:intergenic | 20.0% |
| !! | ATTTAACCCAAAATAATTTG+AGG | - | chr1.2:63247430-63247449 | None:intergenic | 20.0% |
| !! | CTTCGTATGTATTAAAAATT+AGG | + | chr1.2:63249769-63249788 | MS.gene07479:intron | 20.0% |
| !! | GATATTAAACAAATAAATGG+GGG | - | chr1.2:63249105-63249124 | None:intergenic | 20.0% |
| !! | GGGTACAAATATATTAATTT+AGG | + | chr1.2:63248882-63248901 | MS.gene07479:CDS | 20.0% |
| !! | GTCAAAGTGATTTATAATTT+AGG | + | chr1.2:63248375-63248394 | MS.gene07479:intron | 20.0% |
| !! | GTGTTAAAAACGTTATTAAA+AGG | - | chr1.2:63247782-63247801 | None:intergenic | 20.0% |
| !! | TCATACTTCAATTAAAAAGA+TGG | + | chr1.2:63250878-63250897 | MS.gene07479:intron | 20.0% |
| !! | TGAAAAATAGATAAGAATGA+GGG | - | chr1.2:63246847-63246866 | None:intergenic | 20.0% |
| !! | TTATATGTGTAACTGTTATT+TGG | + | chr1.2:63250357-63250376 | MS.gene07479:intron | 20.0% |
| !! | TTGAAATATCAAAATAGGAA+AGG | - | chr1.2:63250131-63250150 | None:intergenic | 20.0% |
| !!! | AATTATTTTCATGAAAAACG+AGG | + | chr1.2:63247982-63248001 | MS.gene07479:intron | 20.0% |
| !!! | AATTCTTTTCTAAAATGAAG+GGG | + | chr1.2:63249921-63249940 | MS.gene07479:intron | 20.0% |
| !!! | AATTGGGTTAATTATGTTTT+TGG | - | chr1.2:63247966-63247985 | None:intergenic | 20.0% |
| !!! | ACTTTTCTTTTTTTGTTGAA+AGG | + | chr1.2:63248521-63248540 | MS.gene07479:intron | 20.0% |
| !!! | AGAGTTTTTTACAACTTATA+AGG | + | chr1.2:63250840-63250859 | MS.gene07479:intron | 20.0% |
| !!! | ATGTTTTAAGAAACAAAATC+GGG | + | chr1.2:63246936-63246955 | MS.gene07479:intron | 20.0% |
| !!! | ATTTGTTCCTCAAATTATTT+TGG | + | chr1.2:63247420-63247439 | MS.gene07479:intron | 20.0% |
| !!! | CGTTTTTCATGAAAATAATT+GGG | - | chr1.2:63247982-63248001 | None:intergenic | 20.0% |
| !!! | CTATTTGTATTGGTTTAAAT+AGG | + | chr1.2:63250541-63250560 | MS.gene07479:intron | 20.0% |
| !!! | GATTTTTTTTAGATGATTGT+TGG | + | chr1.2:63249020-63249039 | MS.gene07479:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | - | chr1.2:63247806-63247825 | None:intergenic | 20.0% |
| !!! | TAAAAATCATATGCTTCTTT+TGG | + | chr1.2:63250715-63250734 | MS.gene07479:intron | 20.0% |
| !!! | TAGATTTTGCTATAAATGTA+AGG | - | chr1.2:63250326-63250345 | None:intergenic | 20.0% |
| !!! | TCGTTTTTCATGAAAATAAT+TGG | - | chr1.2:63247983-63248002 | None:intergenic | 20.0% |
| !!! | TTGATTTTGTCTGTTAATAT+TGG | + | chr1.2:63247281-63247300 | MS.gene07479:intron | 20.0% |
| !!! | TTTAACATTTTTTTTTCGCT+TGG | - | chr1.2:63248008-63248027 | None:intergenic | 20.0% |
| !!! | TTTGTTCCTCAAATTATTTT+GGG | + | chr1.2:63247421-63247440 | MS.gene07479:intron | 20.0% |
| !!! | TTTTGGGTTAAATATGTTTT+TGG | + | chr1.2:63247437-63247456 | MS.gene07479:intron | 20.0% |
| !!! | TTTTTTATTAAGGAGAATGA+TGG | + | chr1.2:63248473-63248492 | MS.gene07479:intron | 20.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | + | chr1.2:63247847-63247866 | MS.gene07479:intron | 25.0% |
| ! | AAGTTGTAAACATAATAGGT+CGG | - | chr1.2:63248778-63248797 | None:intergenic | 25.0% |
| ! | AATTATAGGAGCAATGATAA+TGG | + | chr1.2:63247245-63247264 | MS.gene07479:intron | 25.0% |
| ! | AGATAGTATAAGATAAGATG+TGG | + | chr1.2:63248401-63248420 | MS.gene07479:intron | 25.0% |
| ! | ATATAGAAGATAATTGGAAG+AGG | + | chr1.2:63250003-63250022 | MS.gene07479:CDS | 25.0% |
| ! | ATATTACATCCAACTAATAG+AGG | - | chr1.2:63250569-63250588 | None:intergenic | 25.0% |
| ! | ATGTTCACAAAAGCAAAAAT+GGG | - | chr1.2:63248430-63248449 | None:intergenic | 25.0% |
| ! | CACAACTTAATATAAAGCTA+CGG | + | chr1.2:63251006-63251025 | MS.gene07479:intron | 25.0% |
| ! | GTTAAAAGAGACATTGTAAA+AGG | - | chr1.2:63250068-63250087 | None:intergenic | 25.0% |
| ! | TAGACTTACTATCAATTCAA+TGG | - | chr1.2:63247095-63247114 | None:intergenic | 25.0% |
| ! | TATCATTGCTCCTATAATTT+AGG | - | chr1.2:63247244-63247263 | None:intergenic | 25.0% |
| ! | TATTAACAGACAAAATCAAG+TGG | - | chr1.2:63247280-63247299 | None:intergenic | 25.0% |
| ! | TCAAAATCATATCATTGACA+TGG | - | chr1.2:63249002-63249021 | None:intergenic | 25.0% |
| ! | TTAACGCATTAAATTGTACT+TGG | + | chr1.2:63249368-63249387 | MS.gene07479:intron | 25.0% |
| ! | TTATACATATGATGATCAGA+TGG | + | chr1.2:63248676-63248695 | MS.gene07479:intron | 25.0% |
| ! | TTATAGCAAAATCTAGTGTT+AGG | + | chr1.2:63250331-63250350 | MS.gene07479:intron | 25.0% |
| ! | TTCAATTAAAAAGATGGATC+TGG | + | chr1.2:63250884-63250903 | MS.gene07479:intron | 25.0% |
| ! | TTTAATAAAGCTTCACTCAT+TGG | - | chr1.2:63249801-63249820 | None:intergenic | 25.0% |
| ! | TTTCACATAATCAAAACCTT+AGG | - | chr1.2:63251234-63251253 | None:intergenic | 25.0% |
| !! | ATTGAATTGATAGTAAGTCT+AGG | + | chr1.2:63247094-63247113 | MS.gene07479:intron | 25.0% |
| !! | CTCTTTTAACAACATAATTG+AGG | + | chr1.2:63250078-63250097 | MS.gene07479:intron | 25.0% |
| !! | CTTTTCCTAAAGATTTCTTT+TGG | + | chr1.2:63247195-63247214 | MS.gene07479:intron | 25.0% |
| !! | TAAATATTGGTTAACAACCT+AGG | - | chr1.2:63249598-63249617 | None:intergenic | 25.0% |
| !! | TGTCGTTTAACTATTTGTAT+TGG | + | chr1.2:63250531-63250550 | MS.gene07479:intron | 25.0% |
| !! | TTTGAGGAACAAATGTTTTA+TGG | - | chr1.2:63247414-63247433 | None:intergenic | 25.0% |
| !!! | ATGGAGTACTGTTTTTTTTA+AGG | - | chr1.2:63247221-63247240 | None:intergenic | 25.0% |
| !!! | GAGTACAGAAATTTTTTGTA+GGG | + | chr1.2:63247879-63247898 | MS.gene07479:intron | 25.0% |
| !!! | TGAGTACAGAAATTTTTTGT+AGG | + | chr1.2:63247878-63247897 | MS.gene07479:intron | 25.0% |
| !!! | TGCTACTTTGTTTTTACTAA+GGG | - | chr1.2:63251051-63251070 | None:intergenic | 25.0% |
| !!! | TGTCAATCATAATTTTTCAG+AGG | - | chr1.2:63249213-63249232 | None:intergenic | 25.0% |
| !!! | TGTTTTTTATTAGTGGTATG+AGG | - | chr1.2:63248281-63248300 | None:intergenic | 25.0% |
| !!! | TTGCAATAGTTTCCATTTTT+TGG | - | chr1.2:63250915-63250934 | None:intergenic | 25.0% |
| AAAACCACCATATTTCCATA+TGG | - | chr1.2:63248053-63248072 | None:intergenic | 30.0% | |
| AAATAGGAAAGGAATTCTTG+AGG | - | chr1.2:63250120-63250139 | None:intergenic | 30.0% | |
| AAGAGAAAAGGAAAATTGCA+TGG | + | chr1.2:63247385-63247404 | MS.gene07479:intron | 30.0% | |
| AAGAGTTATATGCTGCAAAA+TGG | + | chr1.2:63246789-63246808 | MS.gene07479:CDS | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr1.2:63247923-63247942 | MS.gene07479:intron | 30.0% | |
| AAGTAAGGACTAAACTTAGA+AGG | - | chr1.2:63247480-63247499 | None:intergenic | 30.0% | |
| AAGTATATATCTCCTCACTA+TGG | - | chr1.2:63248505-63248524 | None:intergenic | 30.0% | |
| AATTATGATTGACACCTGAT+TGG | + | chr1.2:63249219-63249238 | MS.gene07479:intron | 30.0% | |
| ACAATGATATTAGGGGAATA+TGG | + | chr1.2:63249248-63249267 | MS.gene07479:intron | 30.0% | |
| AGTACTCCATCCTAAATTAT+AGG | + | chr1.2:63247231-63247250 | MS.gene07479:intron | 30.0% | |
| AGTTGTAAACATAATAGGTC+GGG | - | chr1.2:63248777-63248796 | None:intergenic | 30.0% | |
| ATATCATTGACATGGTAATC+TGG | - | chr1.2:63248994-63249013 | None:intergenic | 30.0% | |
| ATTGCTCCTATAATTTAGGA+TGG | - | chr1.2:63247240-63247259 | None:intergenic | 30.0% | |
| CAATTTAATGCGTTAATACC+CGG | - | chr1.2:63249364-63249383 | None:intergenic | 30.0% | |
| CATTGATATCACAACCAAAA+TGG | - | chr1.2:63248713-63248732 | None:intergenic | 30.0% | |
| GAAAAGCAACAATGATTTAG+AGG | + | chr1.2:63250774-63250793 | MS.gene07479:CDS | 30.0% | |
| GATGTTCACAAAAGCAAAAA+TGG | - | chr1.2:63248431-63248450 | None:intergenic | 30.0% | |
| GCATGTATATAGTACAGAAA+TGG | - | chr1.2:63250952-63250971 | None:intergenic | 30.0% | |
| GCTCATTATATTCATAGGAA+AGG | + | chr1.2:63249312-63249331 | MS.gene07479:CDS | 30.0% | |
| GGTTTGTGACAATGATATTA+GGG | + | chr1.2:63249240-63249259 | MS.gene07479:intron | 30.0% | |
| GTTGCTTATCAATTCATATG+TGG | - | chr1.2:63250609-63250628 | None:intergenic | 30.0% | |
| GTTTGTGACAATGATATTAG+GGG | + | chr1.2:63249241-63249260 | MS.gene07479:intron | 30.0% | |
| TAAGGCCAAAAGAAATCTTT+AGG | - | chr1.2:63247203-63247222 | None:intergenic | 30.0% | |
| TAGTAAAAACAAAGTAGCAG+TGG | + | chr1.2:63251052-63251071 | MS.gene07479:CDS | 30.0% | |
| TAGTACGTAATTTATGTGCA+AGG | + | chr1.2:63246969-63246988 | MS.gene07479:intron | 30.0% | |
| TATAGATGCAAACGACAAAT+GGG | + | chr1.2:63250222-63250241 | MS.gene07479:CDS | 30.0% | |
| TGGATGTAATATTCAAGCAA+TGG | + | chr1.2:63250577-63250596 | MS.gene07479:CDS | 30.0% | |
| TTAAGAAACAAAATCGGGTA+TGG | + | chr1.2:63246941-63246960 | MS.gene07479:intron | 30.0% | |
| TTATAGATGCAAACGACAAA+TGG | + | chr1.2:63250221-63250240 | MS.gene07479:CDS | 30.0% | |
| ! | AGAGTTATAAAGAGTGTGAA+AGG | - | chr1.2:63248229-63248248 | None:intergenic | 30.0% |
| ! | AGTTGATGCAAGAGATTTAT+GGG | + | chr1.2:63251151-63251170 | MS.gene07479:CDS | 30.0% |
| ! | CAAAGTCATTTAAGTTCCTA+AGG | + | chr1.2:63251215-63251234 | MS.gene07479:intron | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+AGG | + | chr1.2:63247620-63247639 | MS.gene07479:intron | 30.0% |
| ! | CTATACCTTTTAAACAACGA+AGG | - | chr1.2:63249144-63249163 | None:intergenic | 30.0% |
| ! | CTCTAGCTCATTATATTCAT+AGG | + | chr1.2:63249307-63249326 | MS.gene07479:CDS | 30.0% |
| ! | CTTCGTTGTTTAAAAGGTAT+AGG | + | chr1.2:63249142-63249161 | MS.gene07479:intron | 30.0% |
| ! | CTTTTCCTTCGTTGTTTAAA+AGG | + | chr1.2:63249136-63249155 | MS.gene07479:intron | 30.0% |
| ! | TAGTTGATGCAAGAGATTTA+TGG | + | chr1.2:63251150-63251169 | MS.gene07479:CDS | 30.0% |
| ! | TGATAATGATACCTGTATCT+CGG | - | chr1.2:63248746-63248765 | None:intergenic | 30.0% |
| ! | TGGTTTGTGACAATGATATT+AGG | + | chr1.2:63249239-63249258 | MS.gene07479:intron | 30.0% |
| ! | TTGTATTTTGCATCCTTGTA+GGG | + | chr1.2:63246673-63246692 | MS.gene07479:CDS | 30.0% |
| ! | TTTGTCTGTTAATATTGGCT+TGG | + | chr1.2:63247286-63247305 | MS.gene07479:intron | 30.0% |
| !! | AGTGAAGCTTTATTAAACTC+CGG | + | chr1.2:63249804-63249823 | MS.gene07479:CDS | 30.0% |
| !! | CGCGAAAGGTATTTAATATA+TGG | + | chr1.2:63249686-63249705 | MS.gene07479:intron | 30.0% |
| !! | TTGTCTGTTAATATTGGCTT+GGG | + | chr1.2:63247287-63247306 | MS.gene07479:intron | 30.0% |
| !!! | CTACTTTGTTTTTACTAAGG+GGG | - | chr1.2:63251049-63251068 | None:intergenic | 30.0% |
| !!! | CTGCTACTTTGTTTTTACTA+AGG | - | chr1.2:63251052-63251071 | None:intergenic | 30.0% |
| !!! | GAAAAGTATTTTGCCACATT+AGG | - | chr1.2:63247181-63247200 | None:intergenic | 30.0% |
| !!! | GCTACTTTGTTTTTACTAAG+GGG | - | chr1.2:63251050-63251069 | None:intergenic | 30.0% |
| !!! | TGTTTTTGGTCCCTATAAAA+TGG | + | chr1.2:63247451-63247470 | MS.gene07479:intron | 30.0% |
| !!! | TTTTCTAAAATGAAGGGGAT+GGG | + | chr1.2:63249926-63249945 | MS.gene07479:intron | 30.0% |
| !!! | TTTTGCGAGATTTTTTTCGA+AGG | + | chr1.2:63247755-63247774 | MS.gene07479:intron | 30.0% |
| !!! | TTTTTTAGATGATTGTTGGG+CGG | + | chr1.2:63249024-63249043 | MS.gene07479:intron | 30.0% |
| AAATAGGCTCCTCTATTAGT+TGG | + | chr1.2:63250557-63250576 | MS.gene07479:intron | 35.0% | |
| AATAAAGCTTCACTCATTGG+TGG | - | chr1.2:63249798-63249817 | None:intergenic | 35.0% | |
| ATCATTGTCACAAACCAATC+AGG | - | chr1.2:63249236-63249255 | None:intergenic | 35.0% | |
| ATGCCAAAACATTTGCTTCT+TGG | + | chr1.2:63249501-63249520 | MS.gene07479:CDS | 35.0% | |
| CAATATTCATGAACCCTACA+AGG | - | chr1.2:63246689-63246708 | None:intergenic | 35.0% | |
| CAGGCGATATAGAAGATAAT+TGG | + | chr1.2:63249997-63250016 | MS.gene07479:CDS | 35.0% | |
| CATACGAAGCATGTAAGTAT+TGG | - | chr1.2:63249758-63249777 | None:intergenic | 35.0% | |
| CTATAATAGAAGTCATGCTG+AGG | - | chr1.2:63250207-63250226 | None:intergenic | 35.0% | |
| CTTGCATCAACTATAGTTTC+TGG | - | chr1.2:63251143-63251162 | None:intergenic | 35.0% | |
| GAAAGTTTAATCCGAGATAC+AGG | + | chr1.2:63248732-63248751 | MS.gene07479:CDS | 35.0% | |
| GTGTGAAAGGAAAAGAAAGA+TGG | - | chr1.2:63248216-63248235 | None:intergenic | 35.0% | |
| GTTGTAAACATAATAGGTCG+GGG | - | chr1.2:63248776-63248795 | None:intergenic | 35.0% | |
| TAATATAAAGCTACGGTGAC+AGG | + | chr1.2:63251013-63251032 | MS.gene07479:intron | 35.0% | |
| TAATGCCCAAATGCTGAAAT+GGG | - | chr1.2:63250444-63250463 | None:intergenic | 35.0% | |
| TATAGTACTCCATCCTAATG+TGG | + | chr1.2:63247165-63247184 | MS.gene07479:intron | 35.0% | |
| TCACACATAGAGAAGAAGAT+CGG | - | chr1.2:63249834-63249853 | None:intergenic | 35.0% | |
| TCTTCTTCTCTATGTGTGAA+TGG | + | chr1.2:63249835-63249854 | MS.gene07479:CDS | 35.0% | |
| TCTTGACCGAATGATGAAAT+TGG | + | chr1.2:63248449-63248468 | MS.gene07479:intron | 35.0% | |
| TGATGGAATTATCCATAGTG+AGG | + | chr1.2:63248490-63248509 | MS.gene07479:intron | 35.0% | |
| TGCCAAAACATTTGCTTCTT+GGG | + | chr1.2:63249502-63249521 | MS.gene07479:CDS | 35.0% | |
| TGTATGTTCTGACACCAAAA+AGG | + | chr1.2:63251330-63251349 | MS.gene07479:CDS | 35.0% | |
| TTACTATGTGTGAAAGAGCT+AGG | + | chr1.2:63247004-63247023 | MS.gene07479:intron | 35.0% | |
| TTTGGTCATGCAGATAAACT+TGG | + | chr1.2:63250733-63250752 | MS.gene07479:intron | 35.0% | |
| ! | AGTATTTTGCCACATTAGGA+TGG | - | chr1.2:63247177-63247196 | None:intergenic | 35.0% |
| ! | ATGGTGAGTTGAATTGATCA+TGG | + | chr1.2:63249854-63249873 | MS.gene07479:intron | 35.0% |
| ! | CTTGTATTTTGCATCCTTGT+AGG | + | chr1.2:63246672-63246691 | MS.gene07479:CDS | 35.0% |
| ! | GATCTGGAACAACCAAAAAA+TGG | + | chr1.2:63250900-63250919 | MS.gene07479:intron | 35.0% |
| ! | TACAAGGTCGCAATTTTGTA+GGG | + | chr1.2:63247939-63247958 | MS.gene07479:intron | 35.0% |
| ! | TACCCAAGAAGCAAATGTTT+TGG | - | chr1.2:63249507-63249526 | None:intergenic | 35.0% |
| ! | TATATGCTGCAAAATGGACT+TGG | + | chr1.2:63246795-63246814 | MS.gene07479:CDS | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | + | chr1.2:63247938-63247957 | MS.gene07479:intron | 35.0% |
| !! | AAGCTTTATTAAACTCCGGA+AGG | + | chr1.2:63249808-63249827 | MS.gene07479:CDS | 35.0% |
| !! | AATCGAGACTCAAAGGTATT+TGG | + | chr1.2:63249052-63249071 | MS.gene07479:intron | 35.0% |
| !! | CAACTATAGTTTCTGGTTCA+AGG | - | chr1.2:63251136-63251155 | None:intergenic | 35.0% |
| !! | TAGAAGGTCGCCATTTTATA+GGG | - | chr1.2:63247464-63247483 | None:intergenic | 35.0% |
| !! | TCAACACAATCATTGGTTTC+AGG | + | chr1.2:63251269-63251288 | MS.gene07479:CDS | 35.0% |
| !! | TTAATATTGGCTTGGGATCT+TGG | + | chr1.2:63247294-63247313 | MS.gene07479:intron | 35.0% |
| !! | TTAGAAGGTCGCCATTTTAT+AGG | - | chr1.2:63247465-63247484 | None:intergenic | 35.0% |
| !!! | CTTTTCTAAAATGAAGGGGA+TGG | + | chr1.2:63249925-63249944 | MS.gene07479:intron | 35.0% |
| AAACGTATGCCTGGATCATT+GGG | + | chr1.2:63249464-63249483 | MS.gene07479:CDS | 40.0% | |
| AACGTTTCCTTCAGGAATCA+AGG | + | chr1.2:63249284-63249303 | MS.gene07479:CDS | 40.0% | |
| ACTTGTAGTAAACGTATGCC+TGG | + | chr1.2:63249455-63249474 | MS.gene07479:CDS | 40.0% | |
| ATAAATGCATCCCGACCATA+TGG | + | chr1.2:63248035-63248054 | MS.gene07479:intron | 40.0% | |
| ATCCCGACCATATGGAAATA+TGG | + | chr1.2:63248043-63248062 | MS.gene07479:intron | 40.0% | |
| ATGCTTGAAGTTGGAAATGG+AGG | + | chr1.2:63250395-63250414 | MS.gene07479:CDS | 40.0% | |
| ATTTCATGTCCCAATGATCC+AGG | - | chr1.2:63249476-63249495 | None:intergenic | 40.0% | |
| ATTTGTACCCTAAAGCAGCA+AGG | - | chr1.2:63248872-63248891 | None:intergenic | 40.0% | |
| CACCATATTTCCATATGGTC+GGG | - | chr1.2:63248048-63248067 | None:intergenic | 40.0% | |
| CATAGGAAAGGCTTGAAGTT+GGG | + | chr1.2:63249324-63249343 | MS.gene07479:CDS | 40.0% | |
| CCACCATATTTCCATATGGT+CGG | - | chr1.2:63248049-63248068 | None:intergenic | 40.0% | |
| CTAATGCCCAAATGCTGAAA+TGG | - | chr1.2:63250445-63250464 | None:intergenic | 40.0% | |
| GACATGCTTGAAGTTGGAAA+TGG | + | chr1.2:63250392-63250411 | MS.gene07479:CDS | 40.0% | |
| GCAGATAAACTTGGAGTTCA+AGG | + | chr1.2:63250742-63250761 | MS.gene07479:intron | 40.0% | |
| GGAAATAGTTGGAGAACAAC+AGG | + | chr1.2:63249978-63249997 | MS.gene07479:CDS | 40.0% | |
| GGAACTTAATCGAGACTCAA+AGG | + | chr1.2:63249045-63249064 | MS.gene07479:CDS | 40.0% | |
| GTAGCACTCAACACAATCAT+TGG | + | chr1.2:63251262-63251281 | MS.gene07479:intron | 40.0% | |
| TAAACGTATGCCTGGATCAT+TGG | + | chr1.2:63249463-63249482 | MS.gene07479:CDS | 40.0% | |
| TAAATAAGTGACCGTTCTCG+TGG | + | chr1.2:63247117-63247136 | MS.gene07479:intron | 40.0% | |
| TAATTACCATTCCATCCTCC+AGG | - | chr1.2:63250262-63250281 | None:intergenic | 40.0% | |
| TATTATTTCAGCCGACGCAA+TGG | + | chr1.2:63248836-63248855 | MS.gene07479:intron | 40.0% | |
| TCATAGGAAAGGCTTGAAGT+TGG | + | chr1.2:63249323-63249342 | MS.gene07479:CDS | 40.0% | |
| TCTACAGCTACTCGCTTATT+AGG | + | chr1.2:63246723-63246742 | MS.gene07479:CDS | 40.0% | |
| TGATGATCAGATGGAATAGC+TGG | + | chr1.2:63248685-63248704 | MS.gene07479:intron | 40.0% | |
| TGATGCAAGAGATTTATGGG+AGG | + | chr1.2:63251154-63251173 | MS.gene07479:CDS | 40.0% | |
| TGCACGTACACATTATGCTA+TGG | + | chr1.2:63250975-63250994 | MS.gene07479:intron | 40.0% | |
| TTGGGAGTTTATTCAGATGC+CGG | + | chr1.2:63249342-63249361 | MS.gene07479:CDS | 40.0% | |
| TTTCCAACTTCAAGCATGTC+AGG | - | chr1.2:63250392-63250411 | None:intergenic | 40.0% | |
| ! | ACAAAGTAGCAGTGGTCTTA+TGG | + | chr1.2:63251060-63251079 | MS.gene07479:CDS | 40.0% |
| ! | CCAAAAGTGTGGGAAATAGT+TGG | + | chr1.2:63249967-63249986 | MS.gene07479:CDS | 40.0% |
| ! | CCAACTATTTCCCACACTTT+TGG | - | chr1.2:63249970-63249989 | None:intergenic | 40.0% |
| ! | CTTAACCTTCTTCTCTAGAG+TGG | - | chr1.2:63246772-63246791 | None:intergenic | 40.0% |
| ! | TGGAATAGCTGGAACCATTT+TGG | + | chr1.2:63248696-63248715 | MS.gene07479:CDS | 40.0% |
| AAAGCTACGGTGACAGGTAT+GGG | + | chr1.2:63251019-63251038 | MS.gene07479:intron | 45.0% | |
| AAGCGAGTAGCTGTAGATGA+TGG | - | chr1.2:63246720-63246739 | None:intergenic | 45.0% | |
| AAGGCTTCAACGTTTCCTTC+AGG | + | chr1.2:63249276-63249295 | MS.gene07479:CDS | 45.0% | |
| ATCGTGCCCATTTCAGCATT+TGG | + | chr1.2:63250435-63250454 | MS.gene07479:CDS | 45.0% | |
| ATGCAACAGTTACTGCGTCT+TGG | + | chr1.2:63251099-63251118 | MS.gene07479:CDS | 45.0% | |
| CAGCATTTGGGCATTAGCTA+AGG | + | chr1.2:63250448-63250467 | MS.gene07479:CDS | 45.0% | |
| CCGACCATATGGAAATATGG+TGG | + | chr1.2:63248046-63248065 | MS.gene07479:intron | 45.0% | |
| GAAGGAAACGTTGAAGCCTT+GGG | - | chr1.2:63249276-63249295 | None:intergenic | 45.0% | |
| GACAAATGGGCATCTTATGC+TGG | + | chr1.2:63250235-63250254 | MS.gene07479:CDS | 45.0% | |
| GATCCTGACATGCTTGAAGT+TGG | + | chr1.2:63250386-63250405 | MS.gene07479:intron | 45.0% | |
| GGGTAACTCAAAAGCTGACA+CGG | - | chr1.2:63248135-63248154 | None:intergenic | 45.0% | |
| TAAAGCTACGGTGACAGGTA+TGG | + | chr1.2:63251018-63251037 | MS.gene07479:intron | 45.0% | |
| TCGTGCCCATTTCAGCATTT+GGG | + | chr1.2:63250436-63250455 | MS.gene07479:CDS | 45.0% | |
| TCTCTGTGCGAATTTGAGTG+AGG | + | chr1.2:63247345-63247364 | MS.gene07479:intron | 45.0% | |
| TGAAGGAAACGTTGAAGCCT+TGG | - | chr1.2:63249277-63249296 | None:intergenic | 45.0% | |
| TGGGAGTTTATTCAGATGCC+GGG | + | chr1.2:63249343-63249362 | MS.gene07479:CDS | 45.0% | |
| TTAGGGGAATATGGTTCCCA+AGG | + | chr1.2:63249257-63249276 | MS.gene07479:intron | 45.0% | |
| ! | TGTGTCCACTCTAGAGAAGA+AGG | + | chr1.2:63246764-63246783 | MS.gene07479:CDS | 45.0% |
| !! | CTTCTCTAGAGTGGACACAT+TGG | - | chr1.2:63246763-63246782 | None:intergenic | 45.0% |
| !! | AGAAAAATTTAAATAAATAT+TGG | - | chr1.2:63249611-63249630 | None:intergenic | 5.0% |
| !!! | AATTATTCTTTATTTTTTTA+TGG | + | chr1.2:63248934-63248953 | MS.gene07479:intron | 5.0% |
| !!! | ATTTATTTAAATTTTTCTTT+AGG | + | chr1.2:63249613-63249632 | MS.gene07479:intron | 5.0% |
| !!! | TTTATTTAAATTTTTCTTTA+GGG | + | chr1.2:63249614-63249633 | MS.gene07479:intron | 5.0% |
| AATGAGGGTAGCTTACCCCA+TGG | - | chr1.2:63246832-63246851 | None:intergenic | 50.0% | |
| ACGGAATAAGCGTTCGCGAA+AGG | + | chr1.2:63249672-63249691 | MS.gene07479:CDS | 50.0% | |
| ACTGCGTCTTGGTCTGACAT+AGG | + | chr1.2:63251110-63251129 | MS.gene07479:CDS | 50.0% | |
| AGAGAAGAAGATCGGCCTTC+CGG | - | chr1.2:63249826-63249845 | None:intergenic | 50.0% | |
| ATAAGTGACCGTTCTCGTGG+CGG | + | chr1.2:63247120-63247139 | MS.gene07479:intron | 50.0% | |
| ATGAGGGTAGCTTACCCCAT+GGG | - | chr1.2:63246831-63246850 | None:intergenic | 50.0% | |
| ATGGGAAGATCCTGCAACGT+GGG | + | chr1.2:63249944-63249963 | MS.gene07479:CDS | 50.0% | |
| ATGGGCACGATATTCCTCTG+TGG | - | chr1.2:63250426-63250445 | None:intergenic | 50.0% | |
| GCTAGAGCCTTGATTCCTGA+AGG | - | chr1.2:63249294-63249313 | None:intergenic | 50.0% | |
| ! | AAATGGAGGCATGACCACAG+AGG | + | chr1.2:63250409-63250428 | MS.gene07479:CDS | 50.0% |
| !! | CAACTGGCCTTGCTGCTTTA+GGG | + | chr1.2:63248862-63248881 | MS.gene07479:CDS | 50.0% |
| !! | TCAACTGGCCTTGCTGCTTT+AGG | + | chr1.2:63248861-63248880 | MS.gene07479:CDS | 50.0% |
| ACTTGGACGTACTCCTCCCA+TGG | + | chr1.2:63246812-63246831 | MS.gene07479:CDS | 55.0% | |
| CTTATGCTGGACCTGGAGGA+TGG | + | chr1.2:63250248-63250267 | MS.gene07479:CDS | 55.0% | |
| CTTGGACGTACTCCTCCCAT+GGG | + | chr1.2:63246813-63246832 | MS.gene07479:CDS | 55.0% | |
| GATGGGAAGATCCTGCAACG+TGG | + | chr1.2:63249943-63249962 | MS.gene07479:CDS | 55.0% | |
| GCATCTTATGCTGGACCTGG+AGG | + | chr1.2:63250244-63250263 | MS.gene07479:CDS | 55.0% | |
| GCCAGTTGACACCATTGCGT+CGG | - | chr1.2:63248850-63248869 | None:intergenic | 55.0% | |
| TGCAACGTGGGCCAAAAGTG+TGG | + | chr1.2:63249956-63249975 | MS.gene07479:CDS | 55.0% | |
| TGGGCATCTTATGCTGGACC+TGG | + | chr1.2:63250241-63250260 | MS.gene07479:CDS | 55.0% | |
| TTGGACGTACTCCTCCCATG+GGG | + | chr1.2:63246814-63246833 | MS.gene07479:CDS | 55.0% | |
| ! | ACACTTTTGGCCCACGTTGC+AGG | - | chr1.2:63249957-63249976 | None:intergenic | 55.0% |
| ! | GCAACGTGGGCCAAAAGTGT+GGG | + | chr1.2:63249957-63249976 | MS.gene07479:CDS | 55.0% |
| AGGGTAGCTTACCCCATGGG+AGG | - | chr1.2:63246828-63246847 | None:intergenic | 60.0% | |
| CTACGGTGACAGGTATGGGC+AGG | + | chr1.2:63251023-63251042 | MS.gene07479:intron | 60.0% | |
| GCTGGACCTGGAGGATGGAA+TGG | + | chr1.2:63250253-63250272 | MS.gene07479:CDS | 60.0% | |
| ! | GCCGACGCAATGGTGTCAAC+TGG | + | chr1.2:63248846-63248865 | MS.gene07479:intron | 60.0% |
| !! | GGCGGACTGAGGGTGGAATT+TGG | + | chr1.2:63247138-63247157 | MS.gene07479:intron | 60.0% |
| CCCTCAGTCCGCCACGAGAA+CGG | - | chr1.2:63247131-63247150 | None:intergenic | 65.0% | |
| !! | ACCGTTCTCGTGGCGGACTG+AGG | + | chr1.2:63247127-63247146 | MS.gene07479:intron | 65.0% |
| !! | CCGTTCTCGTGGCGGACTGA+GGG | + | chr1.2:63247128-63247147 | MS.gene07479:intron | 65.0% |
| !! | TTCTCGTGGCGGACTGAGGG+TGG | + | chr1.2:63247131-63247150 | MS.gene07479:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 63246654 | 63251358 | 63246654 | ID=MS.gene07479 |
| chr1.2 | mRNA | 63246654 | 63251358 | 63246654 | ID=MS.gene07479.t1;Parent=MS.gene07479 |
| chr1.2 | exon | 63246654 | 63246835 | 63246654 | ID=MS.gene07479.t1.exon1;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63246654 | 63246835 | 63246654 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63248695 | 63248753 | 63248695 | ID=MS.gene07479.t1.exon2;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63248695 | 63248753 | 63248695 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63248847 | 63248903 | 63248847 | ID=MS.gene07479.t1.exon3;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63248847 | 63248903 | 63248847 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63249032 | 63249066 | 63249032 | ID=MS.gene07479.t1.exon4;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63249032 | 63249066 | 63249032 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63249261 | 63249364 | 63249261 | ID=MS.gene07479.t1.exon5;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63249261 | 63249364 | 63249261 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63249448 | 63249523 | 63249448 | ID=MS.gene07479.t1.exon6;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63249448 | 63249523 | 63249448 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63249635 | 63249693 | 63249635 | ID=MS.gene07479.t1.exon7;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63249635 | 63249693 | 63249635 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63249791 | 63249856 | 63249791 | ID=MS.gene07479.t1.exon8;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63249791 | 63249856 | 63249791 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63249941 | 63250024 | 63249941 | ID=MS.gene07479.t1.exon9;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63249941 | 63250024 | 63249941 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63250210 | 63250274 | 63250210 | ID=MS.gene07479.t1.exon10;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63250210 | 63250274 | 63250210 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63250387 | 63250469 | 63250387 | ID=MS.gene07479.t1.exon11;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63250387 | 63250469 | 63250387 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63250563 | 63250653 | 63250563 | ID=MS.gene07479.t1.exon12;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63250563 | 63250653 | 63250563 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63250746 | 63250795 | 63250746 | ID=MS.gene07479.t1.exon13;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63250746 | 63250795 | 63250746 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63251035 | 63251175 | 63251035 | ID=MS.gene07479.t1.exon14;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63251035 | 63251175 | 63251035 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| chr1.2 | exon | 63251266 | 63251358 | 63251266 | ID=MS.gene07479.t1.exon15;Parent=MS.gene07479.t1 |
| chr1.2 | CDS | 63251266 | 63251358 | 63251266 | ID=cds.MS.gene07479.t1;Parent=MS.gene07479.t1 |
| Gene Sequence |
| Protein sequence |
