Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07480.t1 | XP_013468841.1 | 94.6 | 409 | 22 | 0 | 1 | 409 | 1 | 409 | 9.70E-232 | 812.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07480.t1 | P14749 | 78.3 | 369 | 80 | 0 | 41 | 409 | 43 | 411 | 6.5e-176 | 618.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07480.t1 | A0A072VNB8 | 94.6 | 409 | 22 | 0 | 1 | 409 | 1 | 409 | 7.0e-232 | 812.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92763 | MS.gene07480 | PPI |
| MS.gene07480 | MS.gene27501 | PPI |
| MS.gene059347 | MS.gene07480 | PPI |
| MS.gene07480 | MS.gene049391 | PPI |
| MS.gene07480 | MS.gene06516 | PPI |
| MS.gene07480 | MS.gene92764 | PPI |
| MS.gene07480 | MS.gene036941 | PPI |
| MS.gene07480 | MS.gene013419 | PPI |
| MS.gene036942 | MS.gene07480 | PPI |
| MS.gene27500 | MS.gene07480 | PPI |
| MS.gene07480 | MS.gene87685 | PPI |
| MS.gene87684 | MS.gene07480 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07480.t1 | MTR_1g077520 | 94.621 | 409 | 22 | 0 | 1 | 409 | 1 | 409 | 0.0 | 808 |
| MS.gene07480.t1 | MTR_6g086625 | 80.988 | 405 | 74 | 2 | 4 | 407 | 3 | 405 | 0.0 | 694 |
| MS.gene07480.t1 | MTR_1g077480 | 79.462 | 409 | 79 | 3 | 4 | 407 | 3 | 411 | 0.0 | 689 |
| MS.gene07480.t1 | MTR_1g077520 | 96.108 | 334 | 13 | 0 | 1 | 334 | 1 | 334 | 0.0 | 672 |
| MS.gene07480.t1 | MTR_6g086575 | 78.272 | 405 | 84 | 2 | 4 | 407 | 3 | 404 | 0.0 | 671 |
| MS.gene07480.t1 | MTR_6g069140 | 75.641 | 390 | 92 | 1 | 21 | 407 | 30 | 419 | 0.0 | 642 |
| MS.gene07480.t1 | MTR_7g073650 | 64.960 | 371 | 128 | 2 | 41 | 409 | 38 | 408 | 0.0 | 518 |
| MS.gene07480.t1 | MTR_7g073640 | 61.443 | 402 | 152 | 3 | 10 | 409 | 9 | 409 | 0.0 | 517 |
| MS.gene07480.t1 | MTR_3g094160 | 57.346 | 422 | 159 | 6 | 5 | 409 | 10 | 427 | 8.05e-180 | 508 |
| MS.gene07480.t1 | MTR_1g078410 | 52.632 | 209 | 42 | 4 | 7 | 209 | 4 | 161 | 8.24e-64 | 203 |
| MS.gene07480.t1 | MTR_0279s0030 | 52.800 | 125 | 57 | 2 | 287 | 409 | 101 | 225 | 3.54e-39 | 140 |
| MS.gene07480.t1 | MTR_0279s0030 | 52.800 | 125 | 57 | 2 | 287 | 409 | 185 | 309 | 5.11e-38 | 139 |
| MS.gene07480.t1 | MTR_0279s0030 | 52.800 | 125 | 57 | 2 | 287 | 409 | 250 | 374 | 2.06e-37 | 139 |
| MS.gene07480.t1 | MTR_8g089725 | 25.214 | 468 | 231 | 16 | 54 | 405 | 38 | 502 | 3.02e-26 | 110 |
| MS.gene07480.t1 | MTR_8g089735 | 25.000 | 468 | 232 | 16 | 54 | 405 | 38 | 502 | 1.52e-25 | 108 |
| MS.gene07480.t1 | MTR_2g096530 | 27.520 | 367 | 174 | 13 | 38 | 315 | 22 | 385 | 1.87e-21 | 97.1 |
| MS.gene07480.t1 | MTR_8g089745 | 26.703 | 367 | 178 | 13 | 38 | 316 | 20 | 383 | 3.29e-21 | 95.9 |
| MS.gene07480.t1 | MTR_3g086580 | 26.611 | 357 | 168 | 11 | 50 | 315 | 36 | 389 | 5.87e-21 | 95.5 |
| MS.gene07480.t1 | MTR_8g089740 | 25.676 | 370 | 184 | 12 | 33 | 316 | 15 | 379 | 5.93e-21 | 95.5 |
| MS.gene07480.t1 | MTR_8g089745 | 26.703 | 367 | 178 | 13 | 38 | 316 | 20 | 383 | 7.04e-21 | 95.5 |
| MS.gene07480.t1 | MTR_3g086580 | 31.285 | 179 | 94 | 6 | 164 | 315 | 26 | 202 | 6.75e-14 | 73.6 |
| MS.gene07480.t1 | MTR_3g094180 | 52.381 | 63 | 27 | 1 | 320 | 379 | 7 | 69 | 5.18e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07480.t1 | AT5G08370 | 72.527 | 364 | 100 | 0 | 43 | 406 | 29 | 392 | 0.0 | 587 |
| MS.gene07480.t1 | AT5G08370 | 72.131 | 366 | 102 | 0 | 41 | 406 | 1 | 366 | 0.0 | 585 |
| MS.gene07480.t1 | AT5G08380 | 60.442 | 407 | 156 | 3 | 7 | 409 | 5 | 410 | 0.0 | 522 |
| MS.gene07480.t1 | AT3G56310 | 63.881 | 371 | 129 | 4 | 43 | 409 | 62 | 431 | 4.83e-179 | 506 |
| MS.gene07480.t1 | AT3G56310 | 59.569 | 371 | 121 | 5 | 43 | 409 | 62 | 407 | 1.95e-160 | 458 |
| MS.gene07480.t1 | AT5G08380 | 63.578 | 313 | 110 | 2 | 7 | 316 | 5 | 316 | 1.55e-149 | 426 |
| MS.gene07480.t1 | AT3G26380 | 25.215 | 349 | 171 | 11 | 54 | 315 | 42 | 387 | 1.64e-20 | 93.6 |
| MS.gene07480.t1 | AT3G26380 | 25.215 | 349 | 171 | 11 | 54 | 315 | 42 | 387 | 3.40e-20 | 93.2 |
Find 107 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCGGATTCAAACAATAAA+TGG | 0.147087 | 1.2:+63236727 | MS.gene07480:CDS |
| GTCAACGGGACTTGCAAATT+TGG | 0.157242 | 1.2:+63234697 | MS.gene07480:CDS |
| TTGATTAAATACCTTTCTTT+AGG | 0.196467 | 1.2:-63236230 | None:intergenic |
| TGGAGTAGCTGGAATCATTT+TGG | 0.218651 | 1.2:+63234512 | MS.gene07480:CDS |
| TCAACATATGCTCGGTTATT+AGG | 0.229069 | 1.2:+63233425 | MS.gene07480:CDS |
| ATGCTAAAACATTTGCTTCT+TGG | 0.230773 | 1.2:+63236010 | MS.gene07480:CDS |
| GGGTACCATTATCTTAATTT+AGG | 0.240621 | 1.2:+63234719 | MS.gene07480:CDS |
| AGGAGACATCTTGTTGAAAA+TGG | 0.251897 | 1.2:+63233479 | MS.gene07480:CDS |
| TGCTAAAACATTTGCTTCTT+GGG | 0.279893 | 1.2:+63236011 | MS.gene07480:CDS |
| TCAACGGGACTTGCAAATTT+GGG | 0.283165 | 1.2:+63234698 | MS.gene07480:CDS |
| TTGAAAATGATAGGGAAATA+TGG | 0.285973 | 1.2:+63235752 | MS.gene07480:intron |
| CTGGTGATATTGAAGATAAT+TGG | 0.310651 | 1.2:+63236553 | MS.gene07480:CDS |
| ATCGTTCTCATTTCAGCATA+TGG | 0.316070 | 1.2:+63236937 | MS.gene07480:CDS |
| TTCATTAAGGCTTCACTCAT+TGG | 0.334944 | 1.2:-63236350 | None:intergenic |
| TGATTAAATACCTTTCTTTA+GGG | 0.343598 | 1.2:-63236229 | None:intergenic |
| CACGACAAGGGTTTAAAGTT+GGG | 0.350233 | 1.2:+63235828 | MS.gene07480:CDS |
| ACCTACCTAAATTAAGATAA+TGG | 0.357063 | 1.2:-63234724 | None:intergenic |
| CGTCCAAGGAGAAGGTAATT+AGG | 0.359088 | 1.2:+63233459 | MS.gene07480:CDS |
| TGACCTTCCAGATTTCATTA+AGG | 0.359870 | 1.2:-63236363 | None:intergenic |
| CTTGCATCAACAATGGCTTC+TGG | 0.362303 | 1.2:-63237824 | None:intergenic |
| TTGTTGATGCAAGAGATCTA+TGG | 0.366588 | 1.2:+63237834 | MS.gene07480:CDS |
| AGTGAAAAGTAATAATGATT+TGG | 0.371753 | 1.2:+63237329 | MS.gene07480:CDS |
| AGTGAAGCCTTAATGAAATC+TGG | 0.387023 | 1.2:+63236356 | MS.gene07480:CDS |
| TGATAGGCTCCTTTATTAGT+TGG | 0.398232 | 1.2:+63237092 | MS.gene07480:intron |
| CATCTTGTTGAAAATGGACT+TGG | 0.402096 | 1.2:+63233485 | MS.gene07480:CDS |
| TGAGGGAAATGTTGCAGTAT+TGG | 0.405098 | 1.2:-63235778 | None:intergenic |
| GAAAGTATAGTTCGTGAAAC+AGG | 0.405474 | 1.2:+63234548 | MS.gene07480:CDS |
| GAGGGAAATGTTGCAGTATT+GGG | 0.406174 | 1.2:-63235777 | None:intergenic |
| ACCCTTGTCGTGAACATAAT+CGG | 0.409497 | 1.2:-63235817 | None:intergenic |
| ATATCACAACCAACTAATAA+AGG | 0.413000 | 1.2:-63237101 | None:intergenic |
| TCGTTCTCATTTCAGCATAT+GGG | 0.420766 | 1.2:+63236938 | MS.gene07480:CDS |
| TTCCCAACCTCAAGCATGTC+AGG | 0.426549 | 1.2:-63236891 | None:intergenic |
| TCTTCATGTCCCAGTGATCC+AGG | 0.429018 | 1.2:-63235982 | None:intergenic |
| AATCTCTCAGGTGGAGTAGC+TGG | 0.429622 | 1.2:+63234501 | MS.gene07480:intron |
| TAAACGTATGCCTGGATCAC+TGG | 0.433474 | 1.2:+63235972 | MS.gene07480:CDS |
| AACATTTCCCTCAGGAATGA+AGG | 0.436676 | 1.2:+63235788 | MS.gene07480:CDS |
| AATAAATGGGCATCGTATGC+TGG | 0.452885 | 1.2:+63236741 | MS.gene07480:CDS |
| AATAACCGAGCATATGTTGA+TGG | 0.456837 | 1.2:-63233422 | None:intergenic |
| ATCCTGACATGCTTGAGGTT+GGG | 0.456983 | 1.2:+63236889 | MS.gene07480:CDS |
| GCAGACAAACTAGGAGTTCA+AGG | 0.457937 | 1.2:+63237300 | MS.gene07480:intron |
| TCTCCTAATTACCTTCTCCT+TGG | 0.468719 | 1.2:-63233462 | None:intergenic |
| TTGGGGATCTACTCAGATGC+TGG | 0.473654 | 1.2:+63235846 | MS.gene07480:CDS |
| TCACGACAAGGGTTTAAAGT+TGG | 0.475337 | 1.2:+63235827 | MS.gene07480:CDS |
| AGCGGATTCAAACAATAAAT+GGG | 0.476529 | 1.2:+63236728 | MS.gene07480:CDS |
| GCTGATGCAATGGTGTCAAC+GGG | 0.486539 | 1.2:+63234683 | MS.gene07480:intron |
| CAGCATATGGGCTTTAGCTA+AGG | 0.488753 | 1.2:+63236950 | MS.gene07480:CDS |
| TTTGTTATTGCAGACAAACT+AGG | 0.489482 | 1.2:+63237291 | MS.gene07480:intron |
| AGCTGATGCAATGGTGTCAA+CGG | 0.491878 | 1.2:+63234682 | MS.gene07480:intron |
| GATCCTGACATGCTTGAGGT+TGG | 0.493056 | 1.2:+63236888 | MS.gene07480:intron |
| ATGGGAAGACCCAGCAACAT+GGG | 0.494903 | 1.2:+63236500 | MS.gene07480:CDS |
| GTTGGTTATTAGTTCATATG+TGG | 0.497210 | 1.2:-63237141 | None:intergenic |
| ACTTGTAGTAAACGTATGCC+TGG | 0.499229 | 1.2:+63235964 | MS.gene07480:CDS |
| TCTTCTTCTCAATGTGTGAA+TGG | 0.499960 | 1.2:+63236387 | MS.gene07480:CDS |
| GAAAAGTAATAATGATTTGG+AGG | 0.511671 | 1.2:+63237332 | MS.gene07480:CDS |
| ATATTGAAGATAATTGGAAT+AGG | 0.511959 | 1.2:+63236559 | MS.gene07480:CDS |
| TATACGTTGTAGGTTTGGGC+AGG | 0.517370 | 1.2:+63237707 | MS.gene07480:intron |
| GGCAATTAGACTCATGGCTA+TGG | 0.519918 | 1.2:+63233358 | MS.gene07480:CDS |
| TAATTACCATTCCATCCTCC+AGG | 0.520204 | 1.2:-63236765 | None:intergenic |
| AGGCAACAATAATTGCATCT+TGG | 0.520762 | 1.2:+63237783 | MS.gene07480:CDS |
| GGAAATAGTTGGAGAACAAC+TGG | 0.522039 | 1.2:+63236534 | MS.gene07480:CDS |
| CTCTGAATCTCGATTGAGCT+CGG | 0.525537 | 1.2:-63235426 | None:intergenic |
| TTAAGGCTTCACTCATTGGC+GGG | 0.529204 | 1.2:-63236346 | None:intergenic |
| TACTGCAATAACTTCCGAGT+TGG | 0.529388 | 1.2:-63237159 | None:intergenic |
| GATGGGAAGACCCAGCAACA+TGG | 0.530363 | 1.2:+63236499 | MS.gene07480:CDS |
| AAGGTCTAAGCCCTAAAGAA+AGG | 0.535262 | 1.2:+63236219 | MS.gene07480:CDS |
| CACTATGGCAATTAGACTCA+TGG | 0.537430 | 1.2:+63233352 | None:intergenic |
| ACGACAAGGGTTTAAAGTTG+GGG | 0.537512 | 1.2:+63235829 | MS.gene07480:CDS |
| CGTATGCTGGACCTGGAGGA+TGG | 0.538221 | 1.2:+63236754 | MS.gene07480:CDS |
| ATTAAGGCTTCACTCATTGG+CGG | 0.541238 | 1.2:-63236347 | None:intergenic |
| TGTTGATGCAAGAGATCTAT+GGG | 0.541350 | 1.2:+63237835 | MS.gene07480:CDS |
| GACATGCTTGAGGTTGGGAA+TGG | 0.559763 | 1.2:+63236894 | MS.gene07480:CDS |
| TGGGCATCGTATGCTGGACC+TGG | 0.560426 | 1.2:+63236747 | MS.gene07480:CDS |
| TTCCACTTGAAACTAGCTCG+TGG | 0.562402 | 1.2:-63238028 | None:intergenic |
| ATTGCATCTTGGTCTGACAT+AGG | 0.566385 | 1.2:+63237794 | MS.gene07480:CDS |
| TGGGGATCTACTCAGATGCT+GGG | 0.569882 | 1.2:+63235847 | MS.gene07480:CDS |
| AAACGTATGCCTGGATCACT+GGG | 0.570234 | 1.2:+63235973 | MS.gene07480:CDS |
| CAACGGGACTTGCAAATTTG+GGG | 0.574225 | 1.2:+63234699 | MS.gene07480:CDS |
| GCCGATTATGTTCACGACAA+GGG | 0.574231 | 1.2:+63235816 | MS.gene07480:CDS |
| TAAAGAGTAACTTACCCCAT+GGG | 0.574865 | 1.2:-63233518 | None:intergenic |
| CAAAACAACGTCCAAGGAGA+AGG | 0.581274 | 1.2:+63233451 | MS.gene07480:CDS |
| ATTAGATCCTGACATGCTTG+AGG | 0.584939 | 1.2:+63236884 | MS.gene07480:intron |
| AATTATCACAGCTGATGCAA+TGG | 0.587045 | 1.2:+63234673 | MS.gene07480:intron |
| ATGCTTGAGGTTGGGAATGG+AGG | 0.591259 | 1.2:+63236897 | MS.gene07480:CDS |
| AATACTGCAACATTTCCCTC+AGG | 0.594240 | 1.2:+63235780 | MS.gene07480:CDS |
| AGGTAACAAAACAACGTCCA+AGG | 0.594953 | 1.2:+63233445 | MS.gene07480:CDS |
| ATGGAATAGGAGCTCAACAA+AGG | 0.594956 | 1.2:+63237763 | MS.gene07480:CDS |
| GCTGGACCTGGAGGATGGAA+TGG | 0.595925 | 1.2:+63236759 | MS.gene07480:CDS |
| CCCTAGCATGACTTCTATAG+CGG | 0.600037 | 1.2:+63236710 | MS.gene07480:intron |
| ATGTTCCATCAACATATGCT+CGG | 0.601832 | 1.2:+63233417 | MS.gene07480:CDS |
| TGGTTGTGATATTCGTGCAA+TGG | 0.603010 | 1.2:+63237112 | MS.gene07480:CDS |
| TCCACTTGAAACTAGCTCGT+GGG | 0.603078 | 1.2:-63238027 | None:intergenic |
| AGCCGATTATGTTCACGACA+AGG | 0.606759 | 1.2:+63235815 | MS.gene07480:CDS |
| GGCTAAAGCCTTCATTCCTG+AGG | 0.608823 | 1.2:-63235796 | None:intergenic |
| CGAGCTCAATCGAGATTCAG+AGG | 0.612330 | 1.2:+63235427 | MS.gene07480:CDS |
| AGGTCCTCTAAGTGAAAACA+AGG | 0.615653 | 1.2:+63237727 | MS.gene07480:CDS |
| AGCATGAGAATCTATTTCAA+CGG | 0.616843 | 1.2:-63237983 | None:intergenic |
| TATGATAATTGTGAAAACAA+AGG | 0.625517 | 1.2:+63236200 | MS.gene07480:CDS |
| GCTAAAGCCTTCATTCCTGA+GGG | 0.630069 | 1.2:-63235795 | None:intergenic |
| AAGCCTTAATGAAATCTGGA+AGG | 0.632024 | 1.2:+63236360 | MS.gene07480:CDS |
| TAGATCTCTTGCATCAACAA+TGG | 0.642957 | 1.2:-63237831 | None:intergenic |
| GAAGTTATTGCAGTAAACCA+AGG | 0.645190 | 1.2:+63237167 | MS.gene07480:CDS |
| AAAGAGTAACTTACCCCATG+GGG | 0.654754 | 1.2:-63233517 | None:intergenic |
| ATATGAACTAATAACCAACT+CGG | 0.665369 | 1.2:+63237145 | MS.gene07480:CDS |
| GCATCGTATGCTGGACCTGG+AGG | 0.696296 | 1.2:+63236750 | MS.gene07480:CDS |
| AAGAGTAACTTACCCCATGG+GGG | 0.697614 | 1.2:-63233516 | None:intergenic |
| AGAGTAACTTACCCCATGGG+GGG | 0.714241 | 1.2:-63233515 | None:intergenic |
| TGATGCAAGAGATCTATGGG+AGG | 0.758189 | 1.2:+63237838 | MS.gene07480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAGATAGTTA+TGG | - | chr1.2:63235001-63235020 | None:intergenic | 10.0% |
| !! | AAGTATAAAATAATTAATGA+TGG | + | chr1.2:63233960-63233979 | MS.gene07480:intron | 10.0% |
| !! | CATATATTTATATTAAAATG+TGG | - | chr1.2:63234882-63234901 | None:intergenic | 10.0% |
| !! | GAAATTAATAAATTCATAAA+TGG | - | chr1.2:63233901-63233920 | None:intergenic | 10.0% |
| !! | TTAAATATAATGAAATATGT+TGG | - | chr1.2:63237432-63237451 | None:intergenic | 10.0% |
| !! | TTATCAATATATAACAAAAA+TGG | - | chr1.2:63236635-63236654 | None:intergenic | 10.0% |
| !! | AGTCATTCAATAAAAAAAAA+AGG | + | chr1.2:63235190-63235209 | MS.gene07480:intron | 15.0% |
| !! | ATTTATTAATTTCTTCCATT+TGG | + | chr1.2:63233908-63233927 | MS.gene07480:intron | 15.0% |
| !! | CATATTAGTTCAATATTAAA+GGG | + | chr1.2:63234169-63234188 | MS.gene07480:intron | 15.0% |
| !! | GTCAAAAAATATATATTTGA+TGG | - | chr1.2:63234591-63234610 | None:intergenic | 15.0% |
| !! | TAGTAAATTAAAAAGAGAAA+TGG | - | chr1.2:63234141-63234160 | None:intergenic | 15.0% |
| !! | TATAAAATAATTAATGATGG+TGG | + | chr1.2:63233963-63233982 | MS.gene07480:intron | 15.0% |
| !! | TCATATTAGTTCAATATTAA+AGG | + | chr1.2:63234168-63234187 | MS.gene07480:intron | 15.0% |
| !! | TGACATTATATAAGAATTAT+TGG | - | chr1.2:63236306-63236325 | None:intergenic | 15.0% |
| !! | TGTTTCACAAAATTATTTAA+CGG | - | chr1.2:63236474-63236493 | None:intergenic | 15.0% |
| !!! | AAATAATTTTGTGAAACATA+GGG | + | chr1.2:63236476-63236495 | MS.gene07480:intron | 15.0% |
| !!! | ACTAATACTAAACTATTTTT+AGG | + | chr1.2:63237552-63237571 | MS.gene07480:intron | 15.0% |
| !!! | CTGATTTAAATTTTTCTTTA+GGG | + | chr1.2:63236161-63236180 | MS.gene07480:intron | 15.0% |
| !!! | GAAATTTTCTTAATATAGAT+AGG | + | chr1.2:63237682-63237701 | MS.gene07480:intron | 15.0% |
| !!! | GATTATTGTATCTTTTTTAA+AGG | + | chr1.2:63235719-63235738 | MS.gene07480:intron | 15.0% |
| !!! | TAAATAATTTTGTGAAACAT+AGG | + | chr1.2:63236475-63236494 | MS.gene07480:intron | 15.0% |
| !! | AAAATAATTTGATCACAAGA+TGG | - | chr1.2:63236683-63236702 | None:intergenic | 20.0% |
| !! | ACTCTTTATTATCAATTTCT+TGG | + | chr1.2:63233533-63233552 | MS.gene07480:intron | 20.0% |
| !! | AGAAACATGCATATTTAAAT+TGG | - | chr1.2:63235560-63235579 | None:intergenic | 20.0% |
| !! | AGTGAAAAGTAATAATGATT+TGG | + | chr1.2:63237329-63237348 | MS.gene07480:CDS | 20.0% |
| !! | ATATTGAAGATAATTGGAAT+AGG | + | chr1.2:63236559-63236578 | MS.gene07480:CDS | 20.0% |
| !! | ATCATGAAAATTATCATCAT+GGG | - | chr1.2:63234465-63234484 | None:intergenic | 20.0% |
| !! | ATGAACTAAAGAACAATATA+AGG | - | chr1.2:63237884-63237903 | None:intergenic | 20.0% |
| !! | ATTTCTTCTATATGTCAATA+AGG | + | chr1.2:63237238-63237257 | MS.gene07480:intron | 20.0% |
| !! | CAATATTCTCTAAATTTCAA+TGG | - | chr1.2:63236836-63236855 | None:intergenic | 20.0% |
| !! | CCTAAAGAAAAATTTAAATC+AGG | - | chr1.2:63236163-63236182 | None:intergenic | 20.0% |
| !! | CTAACTAATTGAAAATGATA+GGG | + | chr1.2:63235744-63235763 | MS.gene07480:intron | 20.0% |
| !! | TAAGGAATCAATGAAAAAAA+CGG | + | chr1.2:63236582-63236601 | MS.gene07480:intron | 20.0% |
| !! | TAATAAATTCATAAATGGAG+AGG | - | chr1.2:63233896-63233915 | None:intergenic | 20.0% |
| !! | TATAAGATAAAGTTGAACAA+TGG | - | chr1.2:63234091-63234110 | None:intergenic | 20.0% |
| !! | TATCATGAAAATTATCATCA+TGG | - | chr1.2:63234466-63234485 | None:intergenic | 20.0% |
| !! | TATGATAATTGTGAAAACAA+AGG | + | chr1.2:63236200-63236219 | MS.gene07480:CDS | 20.0% |
| !! | TCTAACTAATTGAAAATGAT+AGG | + | chr1.2:63235743-63235762 | MS.gene07480:intron | 20.0% |
| !! | TGATTAAATACCTTTCTTTA+GGG | - | chr1.2:63236232-63236251 | None:intergenic | 20.0% |
| !! | TGATTGAATATCACAAAATT+GGG | - | chr1.2:63233583-63233602 | None:intergenic | 20.0% |
| !! | TTGATTAAATACCTTTCTTT+AGG | - | chr1.2:63236233-63236252 | None:intergenic | 20.0% |
| !! | TTGATTGAATATCACAAAAT+TGG | - | chr1.2:63233584-63233603 | None:intergenic | 20.0% |
| !!! | AAAAAGAAACTCTTTTACTA+GGG | - | chr1.2:63236799-63236818 | None:intergenic | 20.0% |
| !!! | AATAATTTTGTGAAACATAG+GGG | + | chr1.2:63236477-63236496 | MS.gene07480:intron | 20.0% |
| !!! | ATACAAACAATTTTGACTTT+AGG | - | chr1.2:63237631-63237650 | None:intergenic | 20.0% |
| !!! | ATTTTTTACAAGCTTCTAAA+AGG | + | chr1.2:63234288-63234307 | MS.gene07480:intron | 20.0% |
| !!! | CCTGATTTAAATTTTTCTTT+AGG | + | chr1.2:63236160-63236179 | MS.gene07480:intron | 20.0% |
| !!! | TAAAAAATGTATCCTCTTTT+AGG | - | chr1.2:63234276-63234295 | None:intergenic | 20.0% |
| !!! | TAAAAAGAAACTCTTTTACT+AGG | - | chr1.2:63236800-63236819 | None:intergenic | 20.0% |
| !!! | TACAAACAATTTTGACTTTA+GGG | - | chr1.2:63237630-63237649 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTTATCTATACCT+TGG | - | chr1.2:63237187-63237206 | None:intergenic | 20.0% |
| !!! | TTTAGGAGTATATTTTGATT+TGG | - | chr1.2:63234259-63234278 | None:intergenic | 20.0% |
| ! | AATAAGTGAAATACGCAATT+TGG | - | chr1.2:63234023-63234042 | None:intergenic | 25.0% |
| ! | AATATCCATAACTATCTATG+TGG | + | chr1.2:63235027-63235046 | MS.gene07480:intron | 25.0% |
| ! | ACCATTATCTTAATTTAGGT+AGG | + | chr1.2:63234723-63234742 | MS.gene07480:intron | 25.0% |
| ! | ACCTACCTAAATTAAGATAA+TGG | - | chr1.2:63234727-63234746 | None:intergenic | 25.0% |
| ! | AGACACATAAAATAGATAGT+GGG | - | chr1.2:63233992-63234011 | None:intergenic | 25.0% |
| ! | ATAATGAAATATGTTGGTGT+CGG | - | chr1.2:63237426-63237445 | None:intergenic | 25.0% |
| ! | ATATATAGTATGAATCTCTC+AGG | + | chr1.2:63234489-63234508 | MS.gene07480:intron | 25.0% |
| ! | ATATCACAACCAACTAATAA+AGG | - | chr1.2:63237104-63237123 | None:intergenic | 25.0% |
| ! | ATATGAACTAATAACCAACT+CGG | + | chr1.2:63237145-63237164 | MS.gene07480:CDS | 25.0% |
| ! | ATTTAACGGCAAATAGAAAA+TGG | - | chr1.2:63236460-63236479 | None:intergenic | 25.0% |
| ! | TAAAACCTATTTGCATTTGA+AGG | - | chr1.2:63236259-63236278 | None:intergenic | 25.0% |
| ! | TAGACACATAAAATAGATAG+TGG | - | chr1.2:63233993-63234012 | None:intergenic | 25.0% |
| ! | TCAAAATATACTCCTAAAAG+AGG | + | chr1.2:63234261-63234280 | MS.gene07480:intron | 25.0% |
| ! | TCCTTATATATATGTTCTCA+AGG | + | chr1.2:63237660-63237679 | MS.gene07480:intron | 25.0% |
| ! | TCCTTGAGAACATATATATA+AGG | - | chr1.2:63237664-63237683 | None:intergenic | 25.0% |
| ! | TCTAAAAGGATACTTAAGAA+AGG | + | chr1.2:63234302-63234321 | MS.gene07480:intron | 25.0% |
| ! | TTGAAAATGATAGGGAAATA+TGG | + | chr1.2:63235752-63235771 | MS.gene07480:intron | 25.0% |
| !! | AGATTAGTAAGTCTAGAATT+TGG | - | chr1.2:63234632-63234651 | None:intergenic | 25.0% |
| !! | ATCAAAAACAATTTGCTCAA+AGG | - | chr1.2:63237041-63237060 | None:intergenic | 25.0% |
| !! | ATGAAGAAAGTACGTATTTA+CGG | + | chr1.2:63235229-63235248 | MS.gene07480:intron | 25.0% |
| !! | GAAAAGTAATAATGATTTGG+AGG | + | chr1.2:63237332-63237351 | MS.gene07480:CDS | 25.0% |
| !! | GTTCTTTTGTATATACTGAT+AGG | + | chr1.2:63237076-63237095 | MS.gene07480:intron | 25.0% |
| !! | TAAAGTTGAACAATGGTTTT+AGG | - | chr1.2:63234084-63234103 | None:intergenic | 25.0% |
| !!! | AAAGTTGAACAATGGTTTTA+GGG | - | chr1.2:63234083-63234102 | None:intergenic | 25.0% |
| !!! | ACAAACAATTTTGACTTTAG+GGG | - | chr1.2:63237629-63237648 | None:intergenic | 25.0% |
| !!! | ATAAGCACTGAATACAATAA+TGG | - | chr1.2:63237502-63237521 | None:intergenic | 25.0% |
| !!! | TAGCAGTTATTTTATGGAAT+AGG | + | chr1.2:63237750-63237769 | MS.gene07480:CDS | 25.0% |
| AATCTCCTTCAAATGCAAAT+AGG | + | chr1.2:63236251-63236270 | MS.gene07480:intron | 30.0% | |
| AATGAAAACACTAGAAGTCA+AGG | - | chr1.2:63237008-63237027 | None:intergenic | 30.0% | |
| AGCATGAGAATCTATTTCAA+CGG | - | chr1.2:63237986-63238005 | None:intergenic | 30.0% | |
| AGTTTGTCTGCAATAACAAA+AGG | - | chr1.2:63237291-63237310 | None:intergenic | 30.0% | |
| ATACATATGCAACATGAAGA+TGG | - | chr1.2:63235604-63235623 | None:intergenic | 30.0% | |
| ATCCTCCCTATTTATCTATT+TGG | + | chr1.2:63233671-63233690 | MS.gene07480:intron | 30.0% | |
| ATGAAAACACTAGAAGTCAA+GGG | - | chr1.2:63237007-63237026 | None:intergenic | 30.0% | |
| ATGCTAAAACATTTGCTTCT+TGG | + | chr1.2:63236010-63236029 | MS.gene07480:CDS | 30.0% | |
| CAACCCCAAATAGATAAATA+GGG | - | chr1.2:63233679-63233698 | None:intergenic | 30.0% | |
| CTGGTGATATTGAAGATAAT+TGG | + | chr1.2:63236553-63236572 | MS.gene07480:CDS | 30.0% | |
| GAAGATAATTGGAATAGGTA+AGG | + | chr1.2:63236564-63236583 | MS.gene07480:intron | 30.0% | |
| GACACATAAAATAGATAGTG+GGG | - | chr1.2:63233991-63234010 | None:intergenic | 30.0% | |
| GACTAGAATGATAAATGATC+AGG | - | chr1.2:63235174-63235193 | None:intergenic | 30.0% | |
| GGGTACCATTATCTTAATTT+AGG | + | chr1.2:63234719-63234738 | MS.gene07480:CDS | 30.0% | |
| GTTGGTTATTAGTTCATATG+TGG | - | chr1.2:63237144-63237163 | None:intergenic | 30.0% | |
| TAATTAACTGTGTCTACAAC+TGG | + | chr1.2:63233624-63233643 | MS.gene07480:intron | 30.0% | |
| TACATATGCAACATGAAGAT+GGG | - | chr1.2:63235603-63235622 | None:intergenic | 30.0% | |
| TCCTCCCTATTTATCTATTT+GGG | + | chr1.2:63233672-63233691 | MS.gene07480:intron | 30.0% | |
| TGCTAAAACATTTGCTTCTT+GGG | + | chr1.2:63236011-63236030 | MS.gene07480:CDS | 30.0% | |
| TTTCACCACATAGATAGTTA+TGG | - | chr1.2:63235035-63235054 | None:intergenic | 30.0% | |
| ! | AGCGGATTCAAACAATAAAT+GGG | + | chr1.2:63236728-63236747 | MS.gene07480:CDS | 30.0% |
| ! | ATAAGTGCAGAGTATTTAGA+TGG | - | chr1.2:63235298-63235317 | None:intergenic | 30.0% |
| ! | GAGTTTCTTTTTACATGTGA+TGG | + | chr1.2:63236807-63236826 | MS.gene07480:intron | 30.0% |
| ! | TGTCATACATTTTGCCAAAT+AGG | + | chr1.2:63236321-63236340 | MS.gene07480:intron | 30.0% |
| ! | TTAGTAAGTCTAGAATTTGG+AGG | - | chr1.2:63234629-63234648 | None:intergenic | 30.0% |
| !! | ACAAGGTAGCAGTTATTTTA+TGG | + | chr1.2:63237744-63237763 | MS.gene07480:CDS | 30.0% |
| !! | TAGCGGATTCAAACAATAAA+TGG | + | chr1.2:63236727-63236746 | MS.gene07480:CDS | 30.0% |
| !! | TTTGTTATTGCAGACAAACT+AGG | + | chr1.2:63237291-63237310 | MS.gene07480:intron | 30.0% |
| !!! | CTAGAACTTTTTCATATTGC+AGG | + | chr1.2:63235075-63235094 | MS.gene07480:intron | 30.0% |
| !!! | GAATGTAGGTTTTAGAACAA+CGG | - | chr1.2:63234114-63234133 | None:intergenic | 30.0% |
| !!! | GAGAGGATTTTTTTAAAGCT+CGG | - | chr1.2:63233879-63233898 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCAGACGATTGTT+GGG | + | chr1.2:63235403-63235422 | MS.gene07480:intron | 30.0% |
| !!! | TTTTTTTTCCAGACGATTGT+TGG | + | chr1.2:63235402-63235421 | MS.gene07480:intron | 30.0% |
| AAGCCTTAATGAAATCTGGA+AGG | + | chr1.2:63236360-63236379 | MS.gene07480:CDS | 35.0% | |
| AATAACCGAGCATATGTTGA+TGG | - | chr1.2:63233425-63233444 | None:intergenic | 35.0% | |
| AATTATCACAGCTGATGCAA+TGG | + | chr1.2:63234673-63234692 | MS.gene07480:intron | 35.0% | |
| ACGAATGGTGTATGAAATCA+AGG | - | chr1.2:63237378-63237397 | None:intergenic | 35.0% | |
| AGAGAAATGGCATAGAATGT+AGG | - | chr1.2:63234128-63234147 | None:intergenic | 35.0% | |
| AGCTTTGCTCTGACTTTAAA+TGG | + | chr1.2:63233792-63233811 | MS.gene07480:intron | 35.0% | |
| AGGAGACATCTTGTTGAAAA+TGG | + | chr1.2:63233479-63233498 | MS.gene07480:CDS | 35.0% | |
| AGGCAACAATAATTGCATCT+TGG | + | chr1.2:63237783-63237802 | MS.gene07480:CDS | 35.0% | |
| AGTGAAGCCTTAATGAAATC+TGG | + | chr1.2:63236356-63236375 | MS.gene07480:CDS | 35.0% | |
| ATAAAGAGTAACTTACCCCA+TGG | - | chr1.2:63233522-63233541 | None:intergenic | 35.0% | |
| ATCGTTCTCATTTCAGCATA+TGG | + | chr1.2:63236937-63236956 | MS.gene07480:CDS | 35.0% | |
| ATGTTCCATCAACATATGCT+CGG | + | chr1.2:63233417-63233436 | MS.gene07480:CDS | 35.0% | |
| CCAACCCCAAATAGATAAAT+AGG | - | chr1.2:63233680-63233699 | None:intergenic | 35.0% | |
| CCTCCCTATTTATCTATTTG+GGG | + | chr1.2:63233673-63233692 | MS.gene07480:intron | 35.0% | |
| GAAGTTATTGCAGTAAACCA+AGG | + | chr1.2:63237167-63237186 | MS.gene07480:CDS | 35.0% | |
| GCTTTGCTCTGACTTTAAAT+GGG | + | chr1.2:63233793-63233812 | MS.gene07480:intron | 35.0% | |
| TAAAGAGTAACTTACCCCAT+GGG | - | chr1.2:63233521-63233540 | None:intergenic | 35.0% | |
| TAGATAGGTGTATACGTTGT+AGG | + | chr1.2:63237697-63237716 | MS.gene07480:intron | 35.0% | |
| TAGATCTCTTGCATCAACAA+TGG | - | chr1.2:63237834-63237853 | None:intergenic | 35.0% | |
| TATAGTATGAATCTCTCAGG+TGG | + | chr1.2:63234492-63234511 | MS.gene07480:intron | 35.0% | |
| TCAACATATGCTCGGTTATT+AGG | + | chr1.2:63233425-63233444 | MS.gene07480:CDS | 35.0% | |
| TCGTTCTCATTTCAGCATAT+GGG | + | chr1.2:63236938-63236957 | MS.gene07480:CDS | 35.0% | |
| TCTTCTTCTCAATGTGTGAA+TGG | + | chr1.2:63236387-63236406 | MS.gene07480:CDS | 35.0% | |
| TGACCTTCCAGATTTCATTA+AGG | - | chr1.2:63236366-63236385 | None:intergenic | 35.0% | |
| TGATAGGCTCCTTTATTAGT+TGG | + | chr1.2:63237092-63237111 | MS.gene07480:intron | 35.0% | |
| TGTTGATGCAAGAGATCTAT+GGG | + | chr1.2:63237835-63237854 | MS.gene07480:CDS | 35.0% | |
| TTCATTAAGGCTTCACTCAT+TGG | - | chr1.2:63236353-63236372 | None:intergenic | 35.0% | |
| TTGTTGATGCAAGAGATCTA+TGG | + | chr1.2:63237834-63237853 | MS.gene07480:CDS | 35.0% | |
| ! | AAGAAACTCTTTTACTAGGG+AGG | - | chr1.2:63236796-63236815 | None:intergenic | 35.0% |
| ! | ATTTCATCTGGTGTCAATTC+CGG | + | chr1.2:63233754-63233773 | MS.gene07480:intron | 35.0% |
| ! | ATTTTGTGAAACATAGGGGA+TGG | + | chr1.2:63236481-63236500 | MS.gene07480:intron | 35.0% |
| ! | CAAAAAGTGTGGGAAATAGT+TGG | + | chr1.2:63236523-63236542 | MS.gene07480:CDS | 35.0% |
| ! | CATCTTGTTGAAAATGGACT+TGG | + | chr1.2:63233485-63233504 | MS.gene07480:CDS | 35.0% |
| ! | CCTATTTATCTATTTGGGGT+TGG | + | chr1.2:63233677-63233696 | MS.gene07480:intron | 35.0% |
| ! | GAAAGTATAGTTCGTGAAAC+AGG | + | chr1.2:63234548-63234567 | MS.gene07480:CDS | 35.0% |
| ! | TTACGTGATGCGAATTTTCA+AGG | + | chr1.2:63234405-63234424 | MS.gene07480:intron | 35.0% |
| ! | TTTTGTGAAACATAGGGGAT+GGG | + | chr1.2:63236482-63236501 | MS.gene07480:intron | 35.0% |
| AAAGAGTAACTTACCCCATG+GGG | - | chr1.2:63233520-63233539 | None:intergenic | 40.0% | |
| AAAGTCAGAGCAAAGCTCTA+TGG | - | chr1.2:63233789-63233808 | None:intergenic | 40.0% | |
| AACATTTCCCTCAGGAATGA+AGG | + | chr1.2:63235788-63235807 | MS.gene07480:CDS | 40.0% | |
| AAGGTCTAAGCCCTAAAGAA+AGG | + | chr1.2:63236219-63236238 | MS.gene07480:CDS | 40.0% | |
| AATACTGCAACATTTCCCTC+AGG | + | chr1.2:63235780-63235799 | MS.gene07480:CDS | 40.0% | |
| ACACCATTCGTACCATACTA+TGG | + | chr1.2:63237387-63237406 | MS.gene07480:intron | 40.0% | |
| ACCCTTGTCGTGAACATAAT+CGG | - | chr1.2:63235820-63235839 | None:intergenic | 40.0% | |
| ACTTGTAGTAAACGTATGCC+TGG | + | chr1.2:63235964-63235983 | MS.gene07480:CDS | 40.0% | |
| AGGGTTGTTACGTACAAGTA+AGG | - | chr1.2:63234064-63234083 | None:intergenic | 40.0% | |
| AGGTAACAAAACAACGTCCA+AGG | + | chr1.2:63233445-63233464 | MS.gene07480:CDS | 40.0% | |
| AGGTCCTCTAAGTGAAAACA+AGG | + | chr1.2:63237727-63237746 | MS.gene07480:CDS | 40.0% | |
| AGGTGTATACGTTGTAGGTT+TGG | + | chr1.2:63237702-63237721 | MS.gene07480:intron | 40.0% | |
| ATGGAATAGGAGCTCAACAA+AGG | + | chr1.2:63237763-63237782 | MS.gene07480:CDS | 40.0% | |
| ATTAAGGCTTCACTCATTGG+CGG | - | chr1.2:63236350-63236369 | None:intergenic | 40.0% | |
| ATTAGATCCTGACATGCTTG+AGG | + | chr1.2:63236884-63236903 | MS.gene07480:intron | 40.0% | |
| ATTGCATCTTGGTCTGACAT+AGG | + | chr1.2:63237794-63237813 | MS.gene07480:CDS | 40.0% | |
| CCCCAAATAGATAAATAGGG+AGG | - | chr1.2:63233676-63233695 | None:intergenic | 40.0% | |
| GAGGGAAATGTTGCAGTATT+GGG | - | chr1.2:63235780-63235799 | None:intergenic | 40.0% | |
| GGAAATAGTTGGAGAACAAC+TGG | + | chr1.2:63236534-63236553 | MS.gene07480:CDS | 40.0% | |
| GGGTGCAATATTAGACTAGA+TGG | - | chr1.2:63233563-63233582 | None:intergenic | 40.0% | |
| GGTGTATACGTTGTAGGTTT+GGG | + | chr1.2:63237703-63237722 | MS.gene07480:intron | 40.0% | |
| GTCTCAAGTTCGATTTCATC+TGG | + | chr1.2:63233742-63233761 | MS.gene07480:intron | 40.0% | |
| TAATTACCATTCCATCCTCC+AGG | - | chr1.2:63236768-63236787 | None:intergenic | 40.0% | |
| TACTGCAATAACTTCCGAGT+TGG | - | chr1.2:63237162-63237181 | None:intergenic | 40.0% | |
| TCAACGGGACTTGCAAATTT+GGG | + | chr1.2:63234698-63234717 | MS.gene07480:CDS | 40.0% | |
| TCTCCTAATTACCTTCTCCT+TGG | - | chr1.2:63233465-63233484 | None:intergenic | 40.0% | |
| TGAGGGAAATGTTGCAGTAT+TGG | - | chr1.2:63235781-63235800 | None:intergenic | 40.0% | |
| TGCGTCTTTATCTCTCCAAA+TGG | - | chr1.2:63233926-63233945 | None:intergenic | 40.0% | |
| TGGTTGTGATATTCGTGCAA+TGG | + | chr1.2:63237112-63237131 | MS.gene07480:CDS | 40.0% | |
| ! | AATAAATGGGCATCGTATGC+TGG | + | chr1.2:63236741-63236760 | MS.gene07480:CDS | 40.0% |
| ! | ACGACAAGGGTTTAAAGTTG+GGG | + | chr1.2:63235829-63235848 | MS.gene07480:CDS | 40.0% |
| ! | CACGACAAGGGTTTAAAGTT+GGG | + | chr1.2:63235828-63235847 | MS.gene07480:CDS | 40.0% |
| ! | GGAGTAGCTGGAATCATTTT+GGG | + | chr1.2:63234513-63234532 | MS.gene07480:CDS | 40.0% |
| ! | TCACGACAAGGGTTTAAAGT+TGG | + | chr1.2:63235827-63235846 | MS.gene07480:CDS | 40.0% |
| ! | TGGAGTAGCTGGAATCATTT+TGG | + | chr1.2:63234512-63234531 | MS.gene07480:CDS | 40.0% |
| !!! | GCTACCTTGTTTTCACTTAG+AGG | - | chr1.2:63237734-63237753 | None:intergenic | 40.0% |
| AAACGTATGCCTGGATCACT+GGG | + | chr1.2:63235973-63235992 | MS.gene07480:CDS | 45.0% | |
| AAGAGTAACTTACCCCATGG+GGG | - | chr1.2:63233519-63233538 | None:intergenic | 45.0% | |
| AGCAACATGGGCAAAAAGTG+TGG | + | chr1.2:63236512-63236531 | MS.gene07480:CDS | 45.0% | |
| AGCCGATTATGTTCACGACA+AGG | + | chr1.2:63235815-63235834 | MS.gene07480:CDS | 45.0% | |
| ATCCTGACATGCTTGAGGTT+GGG | + | chr1.2:63236889-63236908 | MS.gene07480:CDS | 45.0% | |
| CAAAACAACGTCCAAGGAGA+AGG | + | chr1.2:63233451-63233470 | MS.gene07480:CDS | 45.0% | |
| CAACGGGACTTGCAAATTTG+GGG | + | chr1.2:63234699-63234718 | MS.gene07480:CDS | 45.0% | |
| CATCGACATCTGCCATAGTA+TGG | - | chr1.2:63237402-63237421 | None:intergenic | 45.0% | |
| CCCTAGCATGACTTCTATAG+CGG | + | chr1.2:63236710-63236729 | MS.gene07480:intron | 45.0% | |
| CCGCTATAGAAGTCATGCTA+GGG | - | chr1.2:63236713-63236732 | None:intergenic | 45.0% | |
| CGTCCAAGGAGAAGGTAATT+AGG | + | chr1.2:63233459-63233478 | MS.gene07480:CDS | 45.0% | |
| CTCTGAATCTCGATTGAGCT+CGG | - | chr1.2:63235429-63235448 | None:intergenic | 45.0% | |
| CTGCCATAGTATGGTACGAA+TGG | - | chr1.2:63237393-63237412 | None:intergenic | 45.0% | |
| CTTGCATCAACAATGGCTTC+TGG | - | chr1.2:63237827-63237846 | None:intergenic | 45.0% | |
| CTTGGAGTATGCTCATCTCA+AGG | + | chr1.2:63233720-63233739 | MS.gene07480:intron | 45.0% | |
| GCAGACAAACTAGGAGTTCA+AGG | + | chr1.2:63237300-63237319 | MS.gene07480:intron | 45.0% | |
| GCCGATTATGTTCACGACAA+GGG | + | chr1.2:63235816-63235835 | MS.gene07480:CDS | 45.0% | |
| GCTAAAGCCTTCATTCCTGA+GGG | - | chr1.2:63235798-63235817 | None:intergenic | 45.0% | |
| GGCAATTAGACTCATGGCTA+TGG | + | chr1.2:63233358-63233377 | MS.gene07480:CDS | 45.0% | |
| GTCAACGGGACTTGCAAATT+TGG | + | chr1.2:63234697-63234716 | MS.gene07480:CDS | 45.0% | |
| TAAACGTATGCCTGGATCAC+TGG | + | chr1.2:63235972-63235991 | MS.gene07480:CDS | 45.0% | |
| TAAAGCTCGGTATCCAATCC+AGG | - | chr1.2:63233866-63233885 | None:intergenic | 45.0% | |
| TATACGTTGTAGGTTTGGGC+AGG | + | chr1.2:63237707-63237726 | MS.gene07480:intron | 45.0% | |
| TCCGCTATAGAAGTCATGCT+AGG | - | chr1.2:63236714-63236733 | None:intergenic | 45.0% | |
| TGATGCAAGAGATCTATGGG+AGG | + | chr1.2:63237838-63237857 | MS.gene07480:CDS | 45.0% | |
| TTAAGGCTTCACTCATTGGC+GGG | - | chr1.2:63236349-63236368 | None:intergenic | 45.0% | |
| ! | AGCTGATGCAATGGTGTCAA+CGG | + | chr1.2:63234682-63234701 | MS.gene07480:intron | 45.0% |
| ! | CAGCATATGGGCTTTAGCTA+AGG | + | chr1.2:63236950-63236969 | MS.gene07480:CDS | 45.0% |
| ! | GCAACATGGGCAAAAAGTGT+GGG | + | chr1.2:63236513-63236532 | MS.gene07480:CDS | 45.0% |
| !! | ACACTTTTTGCCCATGTTGC+TGG | - | chr1.2:63236513-63236532 | None:intergenic | 45.0% |
| !! | ATTGATCCCCTCGGATTAGT+CGG | + | chr1.2:63233838-63233857 | MS.gene07480:intron | 45.0% |
| !! | CACTTTTTGCCCATGTTGCT+GGG | - | chr1.2:63236512-63236531 | None:intergenic | 45.0% |
| !! | GTTGGCTTAGTGGTTGGTTT+GGG | + | chr1.2:63233695-63233714 | MS.gene07480:intron | 45.0% |
| !! | TAGTGGTTGGTTTGGGATCT+TGG | + | chr1.2:63233702-63233721 | MS.gene07480:intron | 45.0% |
| !! | TCTATTTGGGGTTGGCTTAG+TGG | + | chr1.2:63233685-63233704 | MS.gene07480:intron | 45.0% |
| !! | ATTATATTTATATTAAAATG+TGG | - | chr1.2:63234810-63234829 | None:intergenic | 5.0% |
| !!! | ACTTTTAATTTATTAATTAA+TGG | + | chr1.2:63235512-63235531 | MS.gene07480:intron | 5.0% |
| AATCTCACTGCCCACTTGCA+GGG | - | chr1.2:63233821-63233840 | None:intergenic | 50.0% | |
| AATCTCTCAGGTGGAGTAGC+TGG | + | chr1.2:63234501-63234520 | MS.gene07480:intron | 50.0% | |
| AGAGTAACTTACCCCATGGG+GGG | - | chr1.2:63233518-63233537 | None:intergenic | 50.0% | |
| AGCTCTATGGACTTGTCCAC+CGG | - | chr1.2:63233776-63233795 | None:intergenic | 50.0% | |
| ATGCTTGAGGTTGGGAATGG+AGG | + | chr1.2:63236897-63236916 | MS.gene07480:CDS | 50.0% | |
| ATGGGAAGACCCAGCAACAT+GGG | + | chr1.2:63236500-63236519 | MS.gene07480:CDS | 50.0% | |
| CGAGCTCAATCGAGATTCAG+AGG | + | chr1.2:63235427-63235446 | MS.gene07480:CDS | 50.0% | |
| GACATGCTTGAGGTTGGGAA+TGG | + | chr1.2:63236894-63236913 | MS.gene07480:CDS | 50.0% | |
| GATCCTGACATGCTTGAGGT+TGG | + | chr1.2:63236888-63236907 | MS.gene07480:intron | 50.0% | |
| GGCTAAAGCCTTCATTCCTG+AGG | - | chr1.2:63235799-63235818 | None:intergenic | 50.0% | |
| TAAATGGGTCCCCTGCAAGT+GGG | + | chr1.2:63233808-63233827 | MS.gene07480:intron | 50.0% | |
| TCTTCATGTCCCAGTGATCC+AGG | - | chr1.2:63235985-63236004 | None:intergenic | 50.0% | |
| TGGGGATCTACTCAGATGCT+GGG | + | chr1.2:63235847-63235866 | MS.gene07480:CDS | 50.0% | |
| TTAAATGGGTCCCCTGCAAG+TGG | + | chr1.2:63233807-63233826 | MS.gene07480:intron | 50.0% | |
| TTCCCAACCTCAAGCATGTC+AGG | - | chr1.2:63236894-63236913 | None:intergenic | 50.0% | |
| TTGGGGATCTACTCAGATGC+TGG | + | chr1.2:63235846-63235865 | MS.gene07480:CDS | 50.0% | |
| ! | CTCATTGGCGGGTACCTATT+TGG | - | chr1.2:63236338-63236357 | None:intergenic | 50.0% |
| ! | GCTGATGCAATGGTGTCAAC+GGG | + | chr1.2:63234683-63234702 | MS.gene07480:intron | 50.0% |
| ! | TCATCTGGTGTCAATTCCGG+TGG | + | chr1.2:63233757-63233776 | MS.gene07480:intron | 50.0% |
| !! | GGATTAGTCGGTTCCTGGAT+TGG | + | chr1.2:63233850-63233869 | MS.gene07480:intron | 50.0% |
| !! | GGTTGGCTTAGTGGTTGGTT+TGG | + | chr1.2:63233694-63233713 | MS.gene07480:intron | 50.0% |
| !! | TTTGGGGTTGGCTTAGTGGT+TGG | + | chr1.2:63233689-63233708 | MS.gene07480:intron | 50.0% |
| ATCTCACTGCCCACTTGCAG+GGG | - | chr1.2:63233820-63233839 | None:intergenic | 55.0% | |
| CAATCTCACTGCCCACTTGC+AGG | - | chr1.2:63233822-63233841 | None:intergenic | 55.0% | |
| CAGGAACCGACTAATCCGAG+GGG | - | chr1.2:63233847-63233866 | None:intergenic | 55.0% | |
| CCAGGAACCGACTAATCCGA+GGG | - | chr1.2:63233848-63233867 | None:intergenic | 55.0% | |
| GATGGGAAGACCCAGCAACA+TGG | + | chr1.2:63236499-63236518 | MS.gene07480:CDS | 55.0% | |
| GGCAGTGAGATTGATCCCCT+CGG | + | chr1.2:63233829-63233848 | MS.gene07480:intron | 55.0% | |
| TCCAGGAACCGACTAATCCG+AGG | - | chr1.2:63233849-63233868 | None:intergenic | 55.0% | |
| ! | ACTTGGTTTGACACCCCCCA+TGG | + | chr1.2:63233502-63233521 | MS.gene07480:CDS | 55.0% |
| ! | CTTGGTTTGACACCCCCCAT+GGG | + | chr1.2:63233503-63233522 | MS.gene07480:CDS | 55.0% |
| ! | TTGGTTTGACACCCCCCATG+GGG | + | chr1.2:63233504-63233523 | MS.gene07480:CDS | 55.0% |
| AGCTCGGCCCAACAATCGTC+TGG | - | chr1.2:63235413-63235432 | None:intergenic | 60.0% | |
| CGTATGCTGGACCTGGAGGA+TGG | + | chr1.2:63236754-63236773 | MS.gene07480:CDS | 60.0% | |
| GCATCGTATGCTGGACCTGG+AGG | + | chr1.2:63236750-63236769 | MS.gene07480:CDS | 60.0% | |
| GCTGGACCTGGAGGATGGAA+TGG | + | chr1.2:63236759-63236778 | MS.gene07480:CDS | 60.0% | |
| ! | TGGGCATCGTATGCTGGACC+TGG | + | chr1.2:63236747-63236766 | MS.gene07480:CDS | 60.0% |
| !! | CCCTCGGATTAGTCGGTTCC+TGG | + | chr1.2:63233845-63233864 | MS.gene07480:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 63233356 | 63238038 | 63233356 | ID=MS.gene07480 |
| chr1.2 | mRNA | 63233356 | 63238038 | 63233356 | ID=MS.gene07480.t1;Parent=MS.gene07480 |
| chr1.2 | exon | 63233356 | 63233525 | 63233356 | ID=MS.gene07480.t1.exon1;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63233356 | 63233525 | 63233356 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63234511 | 63234569 | 63234511 | ID=MS.gene07480.t1.exon2;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63234511 | 63234569 | 63234511 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63234684 | 63234740 | 63234684 | ID=MS.gene07480.t1.exon3;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63234684 | 63234740 | 63234684 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63235414 | 63235448 | 63235414 | ID=MS.gene07480.t1.exon4;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63235414 | 63235448 | 63235414 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63235765 | 63235868 | 63235765 | ID=MS.gene07480.t1.exon5;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63235765 | 63235868 | 63235765 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63235957 | 63236032 | 63235957 | ID=MS.gene07480.t1.exon6;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63235957 | 63236032 | 63235957 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63236182 | 63236240 | 63236182 | ID=MS.gene07480.t1.exon7;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63236182 | 63236240 | 63236182 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63236343 | 63236408 | 63236343 | ID=MS.gene07480.t1.exon8;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63236343 | 63236408 | 63236343 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63236497 | 63236580 | 63236497 | ID=MS.gene07480.t1.exon9;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63236497 | 63236580 | 63236497 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63236716 | 63236780 | 63236716 | ID=MS.gene07480.t1.exon10;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63236716 | 63236780 | 63236716 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63236889 | 63236971 | 63236889 | ID=MS.gene07480.t1.exon11;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63236889 | 63236971 | 63236889 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63237098 | 63237188 | 63237098 | ID=MS.gene07480.t1.exon12;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63237098 | 63237188 | 63237098 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63237304 | 63237353 | 63237304 | ID=MS.gene07480.t1.exon13;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63237304 | 63237353 | 63237304 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63237719 | 63237859 | 63237719 | ID=MS.gene07480.t1.exon14;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63237719 | 63237859 | 63237719 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| chr1.2 | exon | 63237949 | 63238038 | 63237949 | ID=MS.gene07480.t1.exon15;Parent=MS.gene07480.t1 |
| chr1.2 | CDS | 63237949 | 63238038 | 63237949 | ID=cds.MS.gene07480.t1;Parent=MS.gene07480.t1 |
| Gene Sequence |
| Protein sequence |
