Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07501.t1 | XP_013468859.1 | 98.4 | 316 | 5 | 0 | 1 | 316 | 152 | 467 | 5.90E-128 | 467.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07501.t1 | Q9M0N1 | 78.8 | 316 | 66 | 1 | 1 | 315 | 165 | 480 | 1.4e-98 | 360.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07501.t1 | A0A072VMS3 | 98.4 | 316 | 5 | 0 | 1 | 316 | 152 | 467 | 4.3e-128 | 467.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene07501 | 0.821442 | 4.03E-53 | -1.69E-46 |
| MS.gene050105 | MS.gene07501 | 0.8095 | 1.84E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene07501 | 0.80221 | 6.25E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene07501 | 0.820231 | 7.65E-53 | -1.69E-46 |
| MS.gene051122 | MS.gene07501 | 0.82848 | 8.78E-55 | -1.69E-46 |
| MS.gene052242 | MS.gene07501 | -0.807529 | 4.84E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene07501 | 0.816449 | 5.50E-52 | -1.69E-46 |
| MS.gene053456 | MS.gene07501 | 0.801663 | 8.10E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene07501 | 0.817117 | 3.89E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene07501 | 0.816346 | 5.80E-52 | -1.69E-46 |
| MS.gene056045 | MS.gene07501 | 0.827825 | 1.26E-54 | -1.69E-46 |
| MS.gene056097 | MS.gene07501 | 0.831632 | 1.50E-55 | -1.69E-46 |
| MS.gene056849 | MS.gene07501 | 0.8467 | 1.84E-59 | -1.69E-46 |
| MS.gene05781 | MS.gene07501 | 0.809231 | 2.10E-50 | -1.69E-46 |
| MS.gene059007 | MS.gene07501 | 0.8032 | 3.90E-49 | -1.69E-46 |
| MS.gene060850 | MS.gene07501 | 0.80158 | 8.42E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene07501 | 0.81428 | 1.67E-51 | -1.69E-46 |
| MS.gene060852 | MS.gene07501 | 0.813388 | 2.62E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene07501 | 0.802207 | 6.26E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07501 | MS.gene035055 | PPI |
| MS.gene029804 | MS.gene07501 | PPI |
| MS.gene064475 | MS.gene07501 | PPI |
| MS.gene051468 | MS.gene07501 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07501.t1 | MTR_1g077740 | 99.051 | 316 | 3 | 0 | 1 | 316 | 152 | 467 | 0.0 | 635 |
| MS.gene07501.t1 | MTR_4g105430 | 39.564 | 321 | 174 | 5 | 3 | 313 | 60 | 370 | 2.54e-74 | 233 |
| MS.gene07501.t1 | MTR_4g102810 | 36.667 | 180 | 91 | 5 | 137 | 314 | 421 | 579 | 1.59e-13 | 71.2 |
| MS.gene07501.t1 | MTR_8g432670 | 30.625 | 160 | 96 | 3 | 156 | 314 | 354 | 499 | 2.41e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07501.t1 | AT4G10790 | 76.899 | 316 | 72 | 1 | 1 | 315 | 165 | 480 | 9.96e-166 | 470 |
| MS.gene07501.t1 | AT4G23040 | 34.225 | 187 | 104 | 4 | 130 | 314 | 355 | 524 | 3.13e-14 | 73.6 |
| MS.gene07501.t1 | AT4G11740 | 32.222 | 180 | 110 | 3 | 137 | 314 | 394 | 563 | 1.03e-12 | 68.9 |
Find 64 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTCCCTCGGGTTGTTTA+TGG | 0.181565 | 1.2:-63004060 | MS.gene07501:CDS |
| ACTCACAAAATTCGGCTTAA+AGG | 0.251262 | 1.2:+63009531 | None:intergenic |
| CTACAAAACTCCGGTGTATC+AGG | 0.293692 | 1.2:+63009430 | None:intergenic |
| AGCCTTGCTGCAACAAGAAC+TGG | 0.308918 | 1.2:+63004877 | None:intergenic |
| CTTGGTGAAGAACCTGAAAA+AGG | 0.335458 | 1.2:-63004444 | MS.gene07501:CDS |
| CTTTCCTTGCGCACACCATT+GGG | 0.343968 | 1.2:+63004174 | None:intergenic |
| CCTTTCCTTGCGCACACCAT+TGG | 0.365652 | 1.2:+63004173 | None:intergenic |
| GTATGACTATGTTGATTCAT+TGG | 0.383014 | 1.2:-63004118 | MS.gene07501:CDS |
| TACTTTACCTGTGTAACATT+AGG | 0.391398 | 1.2:+63004420 | None:intergenic |
| TATGACTATGTTGATTCATT+GGG | 0.400057 | 1.2:-63004117 | MS.gene07501:CDS |
| CTTGAGCTTTCTCTCAGCTT+CGG | 0.405704 | 1.2:+63004557 | None:intergenic |
| AAACCCTCACTCACAAAATT+CGG | 0.407434 | 1.2:+63009523 | None:intergenic |
| GAGAATCGCGCTTCTTCAAC+AGG | 0.409834 | 1.2:-63009251 | MS.gene07501:intron |
| ACGAACTAATGCACGCTTAA+GGG | 0.410986 | 1.2:-63004839 | MS.gene07501:CDS |
| TCCTCAGGCCAGTCTGTTTG+TGG | 0.421845 | 1.2:-63003995 | MS.gene07501:CDS |
| GACGAACTAATGCACGCTTA+AGG | 0.429809 | 1.2:-63004840 | MS.gene07501:CDS |
| TAAGATGAGTAATAGTTTGA+AGG | 0.444349 | 1.2:-63009320 | MS.gene07501:CDS |
| GCCTAGTCTCTAACTTCCCT+CGG | 0.451100 | 1.2:-63004071 | MS.gene07501:CDS |
| TCCGGTGTATCAGGATGATC+AGG | 0.452932 | 1.2:+63009439 | None:intergenic |
| TTGTAGAAGGACGCTTTGTT+CGG | 0.456059 | 1.2:-63009413 | MS.gene07501:CDS |
| GGCTCGTGAAAGAGCAGCAC+AGG | 0.468262 | 1.2:-63004523 | MS.gene07501:CDS |
| AAGAGCAAGATGCTGCATAC+AGG | 0.474369 | 1.2:-63004816 | MS.gene07501:CDS |
| GCCTTGCTGCAACAAGAACT+GGG | 0.476016 | 1.2:+63004878 | None:intergenic |
| CCCCAGTTCTTGTTGCAGCA+AGG | 0.480156 | 1.2:-63004879 | MS.gene07501:CDS |
| TGGATGCGTTACAGCGGTCG+AGG | 0.501906 | 1.2:-63009498 | MS.gene07501:CDS |
| AAAATTGGCACTCTCACTAA+AGG | 0.514236 | 1.2:-63004031 | MS.gene07501:CDS |
| GAAGAGAAAGCTCAATCTCT+TGG | 0.515787 | 1.2:-63004462 | MS.gene07501:CDS |
| GGGAATATTCGTGCTAGTGA+AGG | 0.517235 | 1.2:-63009346 | MS.gene07501:CDS |
| AGTGTCACTAACATCTCCTC+GGG | 0.521835 | 1.2:+63004925 | None:intergenic |
| GCACTCTCACTAAAGGAAGC+TGG | 0.528422 | 1.2:-63004024 | MS.gene07501:CDS |
| TCCTGATCATCCTGATACAC+CGG | 0.529879 | 1.2:-63009440 | MS.gene07501:CDS |
| AAGAGGAAGAACGTCTTGCA+AGG | 0.535723 | 1.2:-63004587 | MS.gene07501:CDS |
| GGAAGCTGGATTGCATCCTC+AGG | 0.540277 | 1.2:-63004010 | MS.gene07501:CDS |
| AAGTGTCACTAACATCTCCT+CGG | 0.548419 | 1.2:+63004924 | None:intergenic |
| GCCATAACAAGAGCACAAAA+CGG | 0.551788 | 1.2:+63009286 | None:intergenic |
| GGAATATTCGTGCTAGTGAA+GGG | 0.556663 | 1.2:-63009345 | MS.gene07501:CDS |
| TAGAAGGACGCTTTGTTCGG+AGG | 0.560780 | 1.2:-63009410 | MS.gene07501:CDS |
| TTTGTGGAGCTTAGTTCATG+AGG | 0.563439 | 1.2:-63003979 | None:intergenic |
| CACAATTATAGGTGTTGGTG+CGG | 0.563768 | 1.2:-63004200 | MS.gene07501:intron |
| CCAATGGTGTGCGCAAGGAA+AGG | 0.565379 | 1.2:-63004173 | MS.gene07501:CDS |
| CGAAGCTGAGAGAAAGCTCA+AGG | 0.565583 | 1.2:-63004556 | MS.gene07501:CDS |
| TTTGAGAGGGATTATGGCGG+TGG | 0.568300 | 1.2:-63009556 | MS.gene07501:CDS |
| CCTAGTCTCTAACTTCCCTC+GGG | 0.569165 | 1.2:-63004070 | MS.gene07501:CDS |
| GTTTCCCAATGGTGTGCGCA+AGG | 0.577538 | 1.2:-63004178 | MS.gene07501:CDS |
| ACTAAGCTCCACAAACAGAC+TGG | 0.594516 | 1.2:+63003987 | None:intergenic |
| GAGAAAGCTCAAGGAAGAAG+AGG | 0.595361 | 1.2:-63004547 | MS.gene07501:CDS |
| AGAGCAAGATGCTGCATACA+GGG | 0.607490 | 1.2:-63004815 | MS.gene07501:CDS |
| CCCGAGGGAAGTTAGAGACT+AGG | 0.610507 | 1.2:+63004070 | None:intergenic |
| AGAGGAAGAACGTCTTGCAA+GGG | 0.610541 | 1.2:-63004586 | MS.gene07501:CDS |
| AGCGTCCTTCTACAAAACTC+CGG | 0.619964 | 1.2:+63009421 | None:intergenic |
| GGAACGGCAGAGAAGAGAAG+AGG | 0.621468 | 1.2:-63004604 | MS.gene07501:CDS |
| ATGGTGTGCGCAAGGAAAGG+AGG | 0.621807 | 1.2:-63004170 | MS.gene07501:CDS |
| TGTATGTCCAGGCTAGGGAA+CGG | 0.623782 | 1.2:-63004620 | MS.gene07501:intron |
| GTGTTGGTGCGGTTTCCCAA+TGG | 0.626912 | 1.2:-63004189 | MS.gene07501:CDS |
| AAAGCTCAAGGAAGAAGAGG+AGG | 0.627771 | 1.2:-63004544 | MS.gene07501:CDS |
| AAAAGGACCTAATGTTACAC+AGG | 0.641329 | 1.2:-63004427 | MS.gene07501:intron |
| TCTTGTCCATAAACAACCCG+AGG | 0.649081 | 1.2:+63004054 | None:intergenic |
| TCCACAAACAGACTGGCCTG+AGG | 0.673911 | 1.2:+63003994 | None:intergenic |
| GTAATAGTTTGAAGGCGTCG+AGG | 0.675844 | 1.2:-63009312 | MS.gene07501:CDS |
| GTGTCACTAACATCTCCTCG+GGG | 0.689574 | 1.2:+63004926 | None:intergenic |
| CTTGTCCATAAACAACCCGA+GGG | 0.695556 | 1.2:+63004055 | None:intergenic |
| GTTTCATGGATGCGTTACAG+CGG | 0.696327 | 1.2:-63009504 | MS.gene07501:CDS |
| CCTTGCTGCAACAAGAACTG+GGG | 0.706366 | 1.2:+63004879 | None:intergenic |
| TGTCACTAACATCTCCTCGG+GGG | 0.758406 | 1.2:+63004927 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATAAATATATCTAG+CGG | + | chr1.2:63006957-63006976 | None:intergenic | 10.0% |
| !! | ATATTAAAATAAAAATTGTG+AGG | - | chr1.2:63006425-63006444 | MS.gene07501:intron | 10.0% |
| !!! | AAAATATTTTAAAGTGATAA+AGG | + | chr1.2:63008320-63008339 | None:intergenic | 10.0% |
| !! | AAAAAAATGAGAAACTAAAA+AGG | + | chr1.2:63009267-63009286 | None:intergenic | 15.0% |
| !! | AAAAAATGAGAAACTAAAAA+GGG | + | chr1.2:63009266-63009285 | None:intergenic | 15.0% |
| !! | AAAATTGTGTTAATAAGTTT+AGG | - | chr1.2:63006120-63006139 | MS.gene07501:intron | 15.0% |
| !! | AAACTACAATACTTAATAAT+TGG | + | chr1.2:63008541-63008560 | None:intergenic | 15.0% |
| !! | AGATAATTAAGATTCAAATT+TGG | - | chr1.2:63004890-63004909 | MS.gene07501:CDS | 15.0% |
| !! | ATGGTAATAATTTAAGAAAA+TGG | + | chr1.2:63004690-63004709 | None:intergenic | 15.0% |
| !!! | ATTTTATTAGTTTTGTTGTT+TGG | - | chr1.2:63007927-63007946 | MS.gene07501:intron | 15.0% |
| !!! | TACTTTTCTTTGTAAAAATA+TGG | + | chr1.2:63005947-63005966 | None:intergenic | 15.0% |
| !!! | TTATTTTATGTGTATGTATT+TGG | - | chr1.2:63004432-63004451 | MS.gene07501:CDS | 15.0% |
| !!! | TTTTAAGAAATTATTGTATC+CGG | - | chr1.2:63006161-63006180 | MS.gene07501:intron | 15.0% |
| !!! | TTTTTAGTTTCTCATTTTTT+TGG | - | chr1.2:63009266-63009285 | MS.gene07501:CDS | 15.0% |
| !! | AAAAGAAAAAAAAAATAGCG+AGG | - | chr1.2:63007820-63007839 | MS.gene07501:intron | 20.0% |
| !! | AATGAAAAGTCAAAATAGAA+AGG | - | chr1.2:63007297-63007316 | MS.gene07501:intron | 20.0% |
| !! | AGCATTATAATATTCAAACT+TGG | + | chr1.2:63007114-63007133 | None:intergenic | 20.0% |
| !! | ATGGTTTATTACACATAATA+TGG | - | chr1.2:63006788-63006807 | MS.gene07501:intron | 20.0% |
| !! | GAAAAAAAAATAGAATGACA+CGG | + | chr1.2:63007592-63007611 | None:intergenic | 20.0% |
| !! | GTAATAATTTAAGAAAATGG+AGG | + | chr1.2:63004687-63004706 | None:intergenic | 20.0% |
| !! | TAAAAATATGGTTGTCAATT+TGG | + | chr1.2:63005935-63005954 | None:intergenic | 20.0% |
| !! | TAACATATTAAAACTCTTAC+CGG | + | chr1.2:63005044-63005063 | None:intergenic | 20.0% |
| !! | TGAATCTTAATTATCTTTAC+AGG | + | chr1.2:63004886-63004905 | None:intergenic | 20.0% |
| !! | TTTAAGAAATTATTGTATCC+GGG | - | chr1.2:63006162-63006181 | MS.gene07501:intron | 20.0% |
| !!! | ATTTGTATATCATTTTTCTG+TGG | - | chr1.2:63008806-63008825 | MS.gene07501:intron | 20.0% |
| !!! | GTCTTTTTAACTAATTTTGT+TGG | - | chr1.2:63006253-63006272 | MS.gene07501:intron | 20.0% |
| !!! | TTACAAAGAAAAGTATGTAT+TGG | - | chr1.2:63005952-63005971 | MS.gene07501:intron | 20.0% |
| !!! | TTCTATTTTTTTTTCCTTTC+AGG | - | chr1.2:63007597-63007616 | MS.gene07501:intron | 20.0% |
| !!! | TTGTTATCTTTTTTGTTGAT+CGG | - | chr1.2:63008288-63008307 | MS.gene07501:intron | 20.0% |
| !!! | TTTTTTGATGTTGGATTTTT+TGG | - | chr1.2:63004342-63004361 | MS.gene07501:intron | 20.0% |
| ! | AACAAAAAAGATAACAATGC+TGG | + | chr1.2:63008285-63008304 | None:intergenic | 25.0% |
| ! | AATTTACAGTTTGATTCATG+TGG | - | chr1.2:63008233-63008252 | MS.gene07501:intron | 25.0% |
| ! | ACAATATTTCATAACTGAGA+GGG | + | chr1.2:63008346-63008365 | None:intergenic | 25.0% |
| ! | ATAGAAGATACAGAAAGTTA+GGG | + | chr1.2:63005496-63005515 | None:intergenic | 25.0% |
| ! | ATGAGAGATGATATTATGAA+TGG | - | chr1.2:63007264-63007283 | MS.gene07501:intron | 25.0% |
| ! | CTTCTGTAATTTGATTGTTA+TGG | - | chr1.2:63005117-63005136 | MS.gene07501:intron | 25.0% |
| ! | GATAAACCATATATGAATTG+AGG | + | chr1.2:63009237-63009256 | None:intergenic | 25.0% |
| ! | TAAAAACCAAAGATATGACA+CGG | + | chr1.2:63006146-63006165 | None:intergenic | 25.0% |
| ! | TAACAATCAAATTACAGAAG+TGG | + | chr1.2:63005117-63005136 | None:intergenic | 25.0% |
| ! | TAAGATGAGTAATAGTTTGA+AGG | - | chr1.2:63004235-63004254 | MS.gene07501:intron | 25.0% |
| ! | TATTCAGATTCTGTTAAATG+TGG | - | chr1.2:63007755-63007774 | MS.gene07501:intron | 25.0% |
| ! | TCACAAAAGTTGTTGAAAAA+TGG | - | chr1.2:63006039-63006058 | MS.gene07501:intron | 25.0% |
| ! | TCTTAACCTCAATTCATATA+TGG | - | chr1.2:63009228-63009247 | MS.gene07501:intron | 25.0% |
| ! | TGAATCAAACTGTAAATTTC+AGG | + | chr1.2:63008231-63008250 | None:intergenic | 25.0% |
| ! | TGTTTATGGACAAGAAAAAT+TGG | - | chr1.2:63009509-63009528 | MS.gene07501:CDS | 25.0% |
| ! | TGTTTCTTTATGCATTAACT+TGG | - | chr1.2:63009298-63009317 | MS.gene07501:CDS | 25.0% |
| ! | TTTCAAAACAATTGCTATGT+AGG | + | chr1.2:63007491-63007510 | None:intergenic | 25.0% |
| !! | ATATCATACATCAAGCTTTT+GGG | - | chr1.2:63006187-63006206 | MS.gene07501:intron | 25.0% |
| !! | GTTGGATTTTATTAATGCAT+CGG | + | chr1.2:63006477-63006496 | None:intergenic | 25.0% |
| !! | TCTTTTGCATTATATGTTTG+CGG | - | chr1.2:63004771-63004790 | MS.gene07501:intron | 25.0% |
| !!! | AAGTATGTTTTTTTGTAGTG+TGG | - | chr1.2:63008781-63008800 | MS.gene07501:intron | 25.0% |
| !!! | CTTTACAGGTATTGATAAAT+TGG | + | chr1.2:63004872-63004891 | None:intergenic | 25.0% |
| !!! | TATGACTATGTTGATTCATT+GGG | - | chr1.2:63009438-63009457 | MS.gene07501:CDS | 25.0% |
| AAAGAAAGAAGCTCTATGTA+GGG | - | chr1.2:63007413-63007432 | MS.gene07501:intron | 30.0% | |
| AACACAGGAAATTAATCTGA+TGG | - | chr1.2:63004799-63004818 | MS.gene07501:CDS | 30.0% | |
| AATACATACGTGCATATGTT+TGG | + | chr1.2:63006645-63006664 | None:intergenic | 30.0% | |
| AATAGTACAGTCTCAAATCT+CGG | + | chr1.2:63008464-63008483 | None:intergenic | 30.0% | |
| AATGATCTGTATGATTTCCT+TGG | - | chr1.2:63008024-63008043 | MS.gene07501:intron | 30.0% | |
| ACACAGGAAATTAATCTGAT+GGG | - | chr1.2:63004800-63004819 | MS.gene07501:CDS | 30.0% | |
| ACATATGCAAACACACATAT+TGG | + | chr1.2:63006565-63006584 | None:intergenic | 30.0% | |
| ACTTTCTCTCTCTATTACTT+TGG | + | chr1.2:63005986-63006005 | None:intergenic | 30.0% | |
| ATAAATATATCTAGCGGTGT+CGG | + | chr1.2:63006951-63006970 | None:intergenic | 30.0% | |
| ATATGCAAACACACATATTG+GGG | + | chr1.2:63006563-63006582 | None:intergenic | 30.0% | |
| ATTAGAGACACTTAATGCAT+TGG | + | chr1.2:63007866-63007885 | None:intergenic | 30.0% | |
| CAAAATAGAAAGGTTACAGA+AGG | - | chr1.2:63007307-63007326 | MS.gene07501:intron | 30.0% | |
| CACAATATTTCATAACTGAG+AGG | + | chr1.2:63008347-63008366 | None:intergenic | 30.0% | |
| CAGTTGTTGCTATATGATAA+CGG | + | chr1.2:63008144-63008163 | None:intergenic | 30.0% | |
| CATAGAAGATACAGAAAGTT+AGG | + | chr1.2:63005497-63005516 | None:intergenic | 30.0% | |
| CATATGCAAACACACATATT+GGG | + | chr1.2:63006564-63006583 | None:intergenic | 30.0% | |
| CCAAAAAAAAGTAGAACTGT+GGG | + | chr1.2:63007518-63007537 | None:intergenic | 30.0% | |
| CTCTCAGTTATGAAATATTG+TGG | - | chr1.2:63008345-63008364 | MS.gene07501:intron | 30.0% | |
| GGGAATCTATTTACTCAATA+GGG | - | chr1.2:63006228-63006247 | MS.gene07501:intron | 30.0% | |
| GTATGTAAGATAGATGTACA+TGG | - | chr1.2:63006769-63006788 | MS.gene07501:intron | 30.0% | |
| GTTGATATTGAACCTATACA+TGG | + | chr1.2:63008430-63008449 | None:intergenic | 30.0% | |
| TAAATCTCCATGTGATAAGT+AGG | + | chr1.2:63008173-63008192 | None:intergenic | 30.0% | |
| TAATGAATTCAGTTTGCATG+AGG | + | chr1.2:63005666-63005685 | None:intergenic | 30.0% | |
| TACAAGTAAGCAACTTTAAG+AGG | + | chr1.2:63007078-63007097 | None:intergenic | 30.0% | |
| TACGAACAGATAGAAAATGA+AGG | - | chr1.2:63005701-63005720 | MS.gene07501:intron | 30.0% | |
| TACTTTACCTGTGTAACATT+AGG | + | chr1.2:63009138-63009157 | None:intergenic | 30.0% | |
| TAGATGAAATATGGAAACCA+AGG | + | chr1.2:63008044-63008063 | None:intergenic | 30.0% | |
| TGGGAATCTATTTACTCAAT+AGG | - | chr1.2:63006227-63006246 | MS.gene07501:intron | 30.0% | |
| TTACTACTAGTAAGTTATGC+CGG | - | chr1.2:63007140-63007159 | MS.gene07501:intron | 30.0% | |
| TTAGAGACACTTAATGCATT+GGG | + | chr1.2:63007865-63007884 | None:intergenic | 30.0% | |
| TTTAATGTAACCAGATGTGT+TGG | + | chr1.2:63004661-63004680 | None:intergenic | 30.0% | |
| ! | AAGAACTAATTTGCCTAAAG+TGG | + | chr1.2:63005234-63005253 | None:intergenic | 30.0% |
| ! | AAGGTTGATTCATATCAAAC+CGG | - | chr1.2:63007326-63007345 | MS.gene07501:intron | 30.0% |
| ! | AATCAGAATTTTGTGTGTTG+GGG | - | chr1.2:63004185-63004204 | MS.gene07501:CDS | 30.0% |
| ! | AATTTTTCTCCTTGGCATAT+TGG | - | chr1.2:63004836-63004855 | MS.gene07501:CDS | 30.0% |
| ! | ACATTCATTTTACTCAATCC+AGG | - | chr1.2:63008590-63008609 | MS.gene07501:intron | 30.0% |
| ! | AGAACTAATTTGCCTAAAGT+GGG | + | chr1.2:63005233-63005252 | None:intergenic | 30.0% |
| ! | AGTTAATCCAAATCGCATTT+TGG | + | chr1.2:63004478-63004497 | None:intergenic | 30.0% |
| ! | ATGTTCAATTGCTGTTCTTT+AGG | - | chr1.2:63007446-63007465 | MS.gene07501:intron | 30.0% |
| ! | CATATCATACATCAAGCTTT+TGG | - | chr1.2:63006186-63006205 | MS.gene07501:intron | 30.0% |
| ! | GAATCAGAATTTTGTGTGTT+GGG | - | chr1.2:63004184-63004203 | MS.gene07501:CDS | 30.0% |
| ! | TCTCAAGATAGTTTTTCTCA+TGG | + | chr1.2:63008108-63008127 | None:intergenic | 30.0% |
| ! | TGAATCAGAATTTTGTGTGT+TGG | - | chr1.2:63004183-63004202 | MS.gene07501:CDS | 30.0% |
| !! | ATGGAGATTTACTTGTTGTA+TGG | - | chr1.2:63008182-63008201 | MS.gene07501:intron | 30.0% |
| !! | GTATGACTATGTTGATTCAT+TGG | - | chr1.2:63009437-63009456 | MS.gene07501:CDS | 30.0% |
| !!! | CACAGTTCTACTTTTTTTTG+GGG | - | chr1.2:63007517-63007536 | MS.gene07501:intron | 30.0% |
| !!! | CCACAGTTCTACTTTTTTTT+GGG | - | chr1.2:63007516-63007535 | MS.gene07501:intron | 30.0% |
| !!! | GTTGGATTTTTTGGTTGAAA+TGG | - | chr1.2:63004351-63004370 | MS.gene07501:intron | 30.0% |
| !!! | TACTTTTTTTTGGGGTGTAT+CGG | - | chr1.2:63007525-63007544 | MS.gene07501:intron | 30.0% |
| !!! | TCCTGCGTTTTTTAAATTAG+CGG | + | chr1.2:63006926-63006945 | None:intergenic | 30.0% |
| !!! | TCTTTAGGCTTTTTTGATGT+TGG | - | chr1.2:63004333-63004352 | MS.gene07501:intron | 30.0% |
| AAAAGGACCTAATGTTACAC+AGG | - | chr1.2:63009128-63009147 | MS.gene07501:intron | 35.0% | |
| AAAATTGGCACTCTCACTAA+AGG | - | chr1.2:63009524-63009543 | MS.gene07501:CDS | 35.0% | |
| AAACCCTCACTCACAAAATT+CGG | + | chr1.2:63004035-63004054 | None:intergenic | 35.0% | |
| AATAGTGCAAACAAGAGTGA+AGG | + | chr1.2:63005337-63005356 | None:intergenic | 35.0% | |
| ACAAGTCAAGTACAGAGTAA+AGG | + | chr1.2:63009200-63009219 | None:intergenic | 35.0% | |
| ACTCACAAAATTCGGCTTAA+AGG | + | chr1.2:63004027-63004046 | None:intergenic | 35.0% | |
| ACTTCATGGTAACCATGTAT+AGG | - | chr1.2:63008415-63008434 | MS.gene07501:intron | 35.0% | |
| AGCAGGATCTAGATGAAATA+TGG | + | chr1.2:63008053-63008072 | None:intergenic | 35.0% | |
| ATACCCTTACTTCATGAGTA+AGG | + | chr1.2:63006539-63006558 | None:intergenic | 35.0% | |
| ATATTTCATAACTGAGAGGG+AGG | + | chr1.2:63008343-63008362 | None:intergenic | 35.0% | |
| ATTGTATTCCTAGTTTCTCC+CGG | + | chr1.2:63007162-63007181 | None:intergenic | 35.0% | |
| CAGATTCTGTTAAATGTGGA+TGG | - | chr1.2:63007759-63007778 | MS.gene07501:intron | 35.0% | |
| CATTAAGTGTCTCTAATGAC+GGG | - | chr1.2:63007869-63007888 | MS.gene07501:intron | 35.0% | |
| CCAAATAAAAGCCTAAGCAA+GGG | + | chr1.2:63008873-63008892 | None:intergenic | 35.0% | |
| CCAACACCTATAATTGTGAT+TGG | + | chr1.2:63009353-63009372 | None:intergenic | 35.0% | |
| CCAATCACAATTATAGGTGT+TGG | - | chr1.2:63009350-63009369 | MS.gene07501:CDS | 35.0% | |
| CCACTTCCAATCACAATTAT+AGG | - | chr1.2:63009344-63009363 | MS.gene07501:CDS | 35.0% | |
| CCCAAAAAAAAGTAGAACTG+TGG | + | chr1.2:63007519-63007538 | None:intergenic | 35.0% | |
| CCTATAATTGTGATTGGAAG+TGG | + | chr1.2:63009347-63009366 | None:intergenic | 35.0% | |
| CGTTATCATATAGCAACAAC+TGG | - | chr1.2:63008142-63008161 | MS.gene07501:intron | 35.0% | |
| CTCATCTCTCGCAATATAAT+AGG | + | chr1.2:63007249-63007268 | None:intergenic | 35.0% | |
| GAAAGAAAGAAGCTCTATGT+AGG | - | chr1.2:63007412-63007431 | MS.gene07501:intron | 35.0% | |
| GATGATCAACATGTAGATAC+AGG | + | chr1.2:63005798-63005817 | None:intergenic | 35.0% | |
| GCATAGAAGATACAGAAATG+AGG | + | chr1.2:63005582-63005601 | None:intergenic | 35.0% | |
| GCATTAAGTGTCTCTAATGA+CGG | - | chr1.2:63007868-63007887 | MS.gene07501:intron | 35.0% | |
| GTAAATTTCAGGCTACTGAA+TGG | + | chr1.2:63008220-63008239 | None:intergenic | 35.0% | |
| TACTACTAGTAAGTTATGCC+GGG | - | chr1.2:63007141-63007160 | MS.gene07501:intron | 35.0% | |
| TATGCAAACACACATATTGG+GGG | + | chr1.2:63006562-63006581 | None:intergenic | 35.0% | |
| TCAAATTACAGAAGTGGAGA+AGG | + | chr1.2:63005111-63005130 | None:intergenic | 35.0% | |
| TGATACCTACAAAACACCAA+AGG | + | chr1.2:63004748-63004767 | None:intergenic | 35.0% | |
| TGGTTGAAATGGATGCAAAT+GGG | - | chr1.2:63004362-63004381 | MS.gene07501:intron | 35.0% | |
| TTACTTGTGGCACAATCATT+TGG | + | chr1.2:63008396-63008415 | None:intergenic | 35.0% | |
| TTCAACAGGTATGGTTCTTT+AGG | - | chr1.2:63004318-63004337 | MS.gene07501:intron | 35.0% | |
| TTGGTATTAGAGACAACGAA+TGG | - | chr1.2:63005400-63005419 | MS.gene07501:intron | 35.0% | |
| TTGGTTGAAATGGATGCAAA+TGG | - | chr1.2:63004361-63004380 | MS.gene07501:intron | 35.0% | |
| TTTGCATTATATGTTTGCGG+TGG | - | chr1.2:63004774-63004793 | MS.gene07501:intron | 35.0% | |
| ! | AAGGGAATAAGTTGAGAACA+GGG | + | chr1.2:63008855-63008874 | None:intergenic | 35.0% |
| ! | AAGTAAGCAACTTTAAGAGG+TGG | + | chr1.2:63007075-63007094 | None:intergenic | 35.0% |
| ! | ACGCAACTTTTTGACAATGA+GGG | + | chr1.2:63006740-63006759 | None:intergenic | 35.0% |
| ! | AGGTTGATTCATATCAAACC+GGG | - | chr1.2:63007327-63007346 | MS.gene07501:intron | 35.0% |
| ! | ATACCAAGTTGACTAGTCAT+TGG | - | chr1.2:63005381-63005400 | MS.gene07501:intron | 35.0% |
| ! | ATACCAATGACTAGTCAACT+TGG | + | chr1.2:63005387-63005406 | None:intergenic | 35.0% |
| ! | GTAACATTAGGTCCTTTTTC+AGG | + | chr1.2:63009126-63009145 | None:intergenic | 35.0% |
| ! | TTAGAAAGTGACTGTTTCTC+CGG | - | chr1.2:63005022-63005041 | MS.gene07501:intron | 35.0% |
| ! | TTCCTGTGAATTTTTCTCCT+TGG | - | chr1.2:63004828-63004847 | MS.gene07501:CDS | 35.0% |
| !! | AATAATAACTTGCTGCGAGT+TGG | + | chr1.2:63006495-63006514 | None:intergenic | 35.0% |
| !! | AATGACGGGTAAATGATTAC+AGG | - | chr1.2:63007883-63007902 | MS.gene07501:intron | 35.0% |
| !! | AATGGATGCAAATGGGTTAA+TGG | - | chr1.2:63004369-63004388 | MS.gene07501:intron | 35.0% |
| !! | ATGACGGGTAAATGATTACA+GGG | - | chr1.2:63007884-63007903 | MS.gene07501:intron | 35.0% |
| !! | ATGGATGCAAATGGGTTAAT+GGG | - | chr1.2:63004370-63004389 | MS.gene07501:intron | 35.0% |
| !! | ATTGCCACTTTCCGATATTA+GGG | - | chr1.2:63007950-63007969 | MS.gene07501:intron | 35.0% |
| !! | CCTTGCTTAGGCTTTTATTT+GGG | - | chr1.2:63008871-63008890 | MS.gene07501:intron | 35.0% |
| !! | GGGTGTTATGTTTTTGTGTT+TGG | - | chr1.2:63004392-63004411 | MS.gene07501:intron | 35.0% |
| !! | TTTTACTCAATCCAGGTTGA+AGG | - | chr1.2:63008597-63008616 | MS.gene07501:intron | 35.0% |
| !!! | AATTTGTAGCTGCTTTTGAG+AGG | - | chr1.2:63003985-63004004 | MS.gene07501:CDS | 35.0% |
| !!! | ATCTTTTTTGTTGATCGGCA+TGG | - | chr1.2:63008293-63008312 | MS.gene07501:intron | 35.0% |
| !!! | ATTTGTAGCTGCTTTTGAGA+GGG | - | chr1.2:63003986-63004005 | MS.gene07501:CDS | 35.0% |
| !!! | CATCTAGATCCTGCTTTTTA+GGG | - | chr1.2:63008058-63008077 | MS.gene07501:intron | 35.0% |
| !!! | CCCACAGTTCTACTTTTTTT+TGG | - | chr1.2:63007515-63007534 | MS.gene07501:intron | 35.0% |
| !!! | TCATCTAGATCCTGCTTTTT+AGG | - | chr1.2:63008057-63008076 | MS.gene07501:intron | 35.0% |
| AAACAAGAGTGAAGGTAGGT+AGG | + | chr1.2:63005329-63005348 | None:intergenic | 40.0% | |
| AAACAGAGACAGAAGAAAGC+TGG | + | chr1.2:63005183-63005202 | None:intergenic | 40.0% | |
| AAATCATTCCTCTTGTGCCT+AGG | + | chr1.2:63005472-63005491 | None:intergenic | 40.0% | |
| AACAGAGACAGAAGAAAGCT+GGG | + | chr1.2:63005182-63005201 | None:intergenic | 40.0% | |
| AATTACAGAAGTGGAGAAGG+AGG | + | chr1.2:63005108-63005127 | None:intergenic | 40.0% | |
| ACACTAACACGTGTTCAACA+CGG | - | chr1.2:63007672-63007691 | MS.gene07501:intron | 40.0% | |
| ACATACGTGCATATGTTTGG+CGG | + | chr1.2:63006642-63006661 | None:intergenic | 40.0% | |
| ACGAACTAATGCACGCTTAA+GGG | - | chr1.2:63008716-63008735 | MS.gene07501:intron | 40.0% | |
| ACGCCTTACTCATGAAGTAA+GGG | - | chr1.2:63006533-63006552 | MS.gene07501:intron | 40.0% | |
| ACTATTCATGTCTCACCAAC+CGG | - | chr1.2:63005351-63005370 | MS.gene07501:intron | 40.0% | |
| AGATACAGAAATGAGGACTG+AGG | + | chr1.2:63005575-63005594 | None:intergenic | 40.0% | |
| ATGTGGATGGAAAAAGCCAT+AGG | - | chr1.2:63007772-63007791 | MS.gene07501:intron | 40.0% | |
| CAGCTTTCTGTATAATGCGA+AGG | + | chr1.2:63005079-63005098 | None:intergenic | 40.0% | |
| CCCAAATAAAAGCCTAAGCA+AGG | + | chr1.2:63008874-63008893 | None:intergenic | 40.0% | |
| CCTAAAGTGGGACAATCAAT+CGG | + | chr1.2:63005221-63005240 | None:intergenic | 40.0% | |
| CTCAACTTATTCCCTTGCTT+AGG | - | chr1.2:63008859-63008878 | MS.gene07501:intron | 40.0% | |
| CTTCTTACGAGCCCTAATAT+CGG | + | chr1.2:63007964-63007983 | None:intergenic | 40.0% | |
| CTTCTTTCTTTCCCATCATG+TGG | + | chr1.2:63007404-63007423 | None:intergenic | 40.0% | |
| CTTGGTGAAGAACCTGAAAA+AGG | - | chr1.2:63009111-63009130 | MS.gene07501:intron | 40.0% | |
| GAAATGGCAAAGAGAGATCA+AGG | + | chr1.2:63005304-63005323 | None:intergenic | 40.0% | |
| GAAGAGAAAGCTCAATCTCT+TGG | - | chr1.2:63009093-63009112 | MS.gene07501:intron | 40.0% | |
| GACTGATCAAGACTGTATGT+TGG | - | chr1.2:63006609-63006628 | MS.gene07501:intron | 40.0% | |
| GCCGCTAATTTAAAAAACGC+AGG | - | chr1.2:63006922-63006941 | MS.gene07501:intron | 40.0% | |
| GCTTGATGTATGATATGACC+CGG | + | chr1.2:63006183-63006202 | None:intergenic | 40.0% | |
| GGAATATTCGTGCTAGTGAA+GGG | - | chr1.2:63004210-63004229 | MS.gene07501:intron | 40.0% | |
| GGTGTTTCCTACTTATCACA+TGG | - | chr1.2:63008163-63008182 | MS.gene07501:intron | 40.0% | |
| GGTTACCATGAAGTTACTTG+TGG | + | chr1.2:63008409-63008428 | None:intergenic | 40.0% | |
| TCAACTTGGTATTAGAGACC+CGG | + | chr1.2:63005373-63005392 | None:intergenic | 40.0% | |
| TCACTACAACCTCAAAGCTA+TGG | + | chr1.2:63007994-63008013 | None:intergenic | 40.0% | |
| TCACTTTCTAAATCACGCAG+GGG | + | chr1.2:63005013-63005032 | None:intergenic | 40.0% | |
| TGAAGGTAGGTAGGAAGAAA+TGG | + | chr1.2:63005320-63005339 | None:intergenic | 40.0% | |
| TGCCAAGGAGAAAAATTCAC+AGG | + | chr1.2:63004833-63004852 | None:intergenic | 40.0% | |
| TGTGGATGGAAAAAGCCATA+GGG | - | chr1.2:63007773-63007792 | MS.gene07501:intron | 40.0% | |
| TGTTGAACACGTGTTAGTGT+CGG | + | chr1.2:63007672-63007691 | None:intergenic | 40.0% | |
| TTAATGCTGTGTGTATGTCC+AGG | - | chr1.2:63008924-63008943 | MS.gene07501:intron | 40.0% | |
| TTATTACCATGTCGACGTGT+TGG | - | chr1.2:63004700-63004719 | MS.gene07501:intron | 40.0% | |
| TTGATGCAGTTGAATGCTAG+TGG | - | chr1.2:63006697-63006716 | MS.gene07501:intron | 40.0% | |
| TTGTGCCACAAGTAACTTCA+TGG | - | chr1.2:63008401-63008420 | MS.gene07501:intron | 40.0% | |
| TTTAGGCCGTGTCATATCTT+TGG | - | chr1.2:63006137-63006156 | MS.gene07501:intron | 40.0% | |
| ! | AAGAGAGATCAAGGTGTCAT+AGG | + | chr1.2:63005295-63005314 | None:intergenic | 40.0% |
| ! | AAGCCGAATTTTGTGAGTGA+GGG | - | chr1.2:63004029-63004048 | MS.gene07501:CDS | 40.0% |
| ! | AAGTGTCACTAACATCTCCT+CGG | + | chr1.2:63008634-63008653 | None:intergenic | 40.0% |
| ! | AGAATTTTGTGTGTTGGGGT+GGG | - | chr1.2:63004189-63004208 | MS.gene07501:CDS | 40.0% |
| ! | AGAGAGATCAAGGTGTCATA+GGG | + | chr1.2:63005294-63005313 | None:intergenic | 40.0% |
| ! | AGTCACTTTCTAAATCACGC+AGG | + | chr1.2:63005015-63005034 | None:intergenic | 40.0% |
| ! | CAACTTTAAGAGGTGGAGTT+TGG | + | chr1.2:63007068-63007087 | None:intergenic | 40.0% |
| ! | CAAGACTGTATGTTGGTTGT+CGG | - | chr1.2:63006616-63006635 | MS.gene07501:intron | 40.0% |
| ! | CAAGGGAATAAGTTGAGAAC+AGG | + | chr1.2:63008856-63008875 | None:intergenic | 40.0% |
| ! | CACGCAACTTTTTGACAATG+AGG | + | chr1.2:63006741-63006760 | None:intergenic | 40.0% |
| ! | CCCTTGCTTAGGCTTTTATT+TGG | - | chr1.2:63008870-63008889 | MS.gene07501:intron | 40.0% |
| ! | GCCATAACAAGAGCACAAAA+CGG | + | chr1.2:63004272-63004291 | None:intergenic | 40.0% |
| ! | GTCACTTTCTAAATCACGCA+GGG | + | chr1.2:63005014-63005033 | None:intergenic | 40.0% |
| ! | TAACCAGATGTGTTGGTGTT+AGG | + | chr1.2:63004654-63004673 | None:intergenic | 40.0% |
| ! | TAAGCCGAATTTTGTGAGTG+AGG | - | chr1.2:63004028-63004047 | MS.gene07501:CDS | 40.0% |
| ! | TCCGTTTTGTGCTCTTGTTA+TGG | - | chr1.2:63004268-63004287 | MS.gene07501:intron | 40.0% |
| ! | TTGTAGAAGGACGCTTTGTT+CGG | - | chr1.2:63004142-63004161 | MS.gene07501:CDS | 40.0% |
| ! | TTTTGTGAGTGAGGGTTTCA+TGG | - | chr1.2:63004037-63004056 | MS.gene07501:CDS | 40.0% |
| !! | AACCAGATGTGTTGGTGTTA+GGG | + | chr1.2:63004653-63004672 | None:intergenic | 40.0% |
| !! | ATACACCGGAGTTTTGTAGA+AGG | - | chr1.2:63004129-63004148 | MS.gene07501:CDS | 40.0% |
| !! | CACAATTATAGGTGTTGGTG+CGG | - | chr1.2:63009355-63009374 | MS.gene07501:CDS | 40.0% |
| !! | CAGGTATTGATAAATTGGCC+AGG | + | chr1.2:63004867-63004886 | None:intergenic | 40.0% |
| !! | GATTGCCACTTTCCGATATT+AGG | - | chr1.2:63007949-63007968 | MS.gene07501:intron | 40.0% |
| !! | TATGACTTGGTCAGAGAGAA+AGG | + | chr1.2:63005539-63005558 | None:intergenic | 40.0% |
| !! | TGGATGCAAATGGGTTAATG+GGG | - | chr1.2:63004371-63004390 | MS.gene07501:intron | 40.0% |
| !!! | AGATCCTGCTTTTTAGGGAT+AGG | - | chr1.2:63008063-63008082 | MS.gene07501:intron | 40.0% |
| !!! | GATCCTGCTTTTTAGGGATA+GGG | - | chr1.2:63008064-63008083 | MS.gene07501:intron | 40.0% |
| !!! | GTGTTCCTTTGGTGTTTTGT+AGG | - | chr1.2:63004740-63004759 | MS.gene07501:intron | 40.0% |
| !!! | TTTTTTGGGGTGTATCGGTT+TGG | - | chr1.2:63007530-63007549 | MS.gene07501:intron | 40.0% |
| AAAGCTCAAGGAAGAAGAGG+AGG | - | chr1.2:63009011-63009030 | MS.gene07501:intron | 45.0% | |
| AAATGAGGACTGAGGAGAAC+CGG | + | chr1.2:63005567-63005586 | None:intergenic | 45.0% | |
| AAGAGCAAGATGCTGCATAC+AGG | - | chr1.2:63008739-63008758 | MS.gene07501:intron | 45.0% | |
| AAGAGGAAGAACGTCTTGCA+AGG | - | chr1.2:63008968-63008987 | MS.gene07501:intron | 45.0% | |
| AAGTTATGCCGGGAGAAACT+AGG | - | chr1.2:63007151-63007170 | MS.gene07501:intron | 45.0% | |
| ACAAGTGCCAGGAGACTATA+AGG | + | chr1.2:63006864-63006883 | None:intergenic | 45.0% | |
| ACAGAGACAGAAGAAAGCTG+GGG | + | chr1.2:63005181-63005200 | None:intergenic | 45.0% | |
| ACTAACACGTGTTCAACACG+GGG | - | chr1.2:63007674-63007693 | MS.gene07501:intron | 45.0% | |
| ACTAAGCTCCACAAACAGAC+TGG | + | chr1.2:63009571-63009590 | None:intergenic | 45.0% | |
| AGAGCAAGATGCTGCATACA+GGG | - | chr1.2:63008740-63008759 | MS.gene07501:intron | 45.0% | |
| AGAGGAAGAACGTCTTGCAA+GGG | - | chr1.2:63008969-63008988 | MS.gene07501:intron | 45.0% | |
| AGCGTCCTTCTACAAAACTC+CGG | + | chr1.2:63004137-63004156 | None:intergenic | 45.0% | |
| ATCATGATCCTAGGCACAAG+AGG | - | chr1.2:63005461-63005480 | MS.gene07501:intron | 45.0% | |
| ATGTTTGCGGTGGATAACAC+AGG | - | chr1.2:63004784-63004803 | MS.gene07501:intron | 45.0% | |
| CAACCTCAAAGCTATGGAGA+TGG | + | chr1.2:63007988-63008007 | None:intergenic | 45.0% | |
| CAACTGCATCAACAAGCTTC+TGG | + | chr1.2:63006689-63006708 | None:intergenic | 45.0% | |
| CAATGCAGAGACGCAAATGA+TGG | + | chr1.2:63005268-63005287 | None:intergenic | 45.0% | |
| CACGCCTTACTCATGAAGTA+AGG | - | chr1.2:63006532-63006551 | MS.gene07501:intron | 45.0% | |
| CACGTGTCCAAAATGCGATT+TGG | - | chr1.2:63004468-63004487 | MS.gene07501:CDS | 45.0% | |
| CACTAACACGTGTTCAACAC+GGG | - | chr1.2:63007673-63007692 | MS.gene07501:intron | 45.0% | |
| CAGGGGAACAGTAAATACAG+GGG | + | chr1.2:63004996-63005015 | None:intergenic | 45.0% | |
| CAGGTGTATCCAATATGCCA+AGG | + | chr1.2:63004848-63004867 | None:intergenic | 45.0% | |
| CCGATTGATTGTCCCACTTT+AGG | - | chr1.2:63005218-63005237 | MS.gene07501:intron | 45.0% | |
| CTACAAAACTCCGGTGTATC+AGG | + | chr1.2:63004128-63004147 | None:intergenic | 45.0% | |
| CTATTCATGTCTCACCAACC+GGG | - | chr1.2:63005352-63005371 | MS.gene07501:intron | 45.0% | |
| CTTGAGCTTTCTCTCAGCTT+CGG | + | chr1.2:63009001-63009020 | None:intergenic | 45.0% | |
| CTTGGCATATTGGATACACC+TGG | - | chr1.2:63004846-63004865 | MS.gene07501:CDS | 45.0% | |
| CTTGTCCATAAACAACCCGA+GGG | + | chr1.2:63009503-63009522 | None:intergenic | 45.0% | |
| GACGAACTAATGCACGCTTA+AGG | - | chr1.2:63008715-63008734 | MS.gene07501:intron | 45.0% | |
| GAGAAAGCTCAAGGAAGAAG+AGG | - | chr1.2:63009008-63009027 | MS.gene07501:intron | 45.0% | |
| GATGTCCAGATCCACATGAT+GGG | - | chr1.2:63007390-63007409 | MS.gene07501:intron | 45.0% | |
| GCAGGGGAACAGTAAATACA+GGG | + | chr1.2:63004997-63005016 | None:intergenic | 45.0% | |
| GGGAATATTCGTGCTAGTGA+AGG | - | chr1.2:63004209-63004228 | MS.gene07501:intron | 45.0% | |
| GGTTTCACACACACAGAAGT+GGG | - | chr1.2:63006208-63006227 | MS.gene07501:intron | 45.0% | |
| GTGCAAACAAGAGTGAAGGT+AGG | + | chr1.2:63005333-63005352 | None:intergenic | 45.0% | |
| GTTGAATGCTAGTGGTTGAG+TGG | - | chr1.2:63006705-63006724 | MS.gene07501:intron | 45.0% | |
| GTTTCATGGATGCGTTACAG+CGG | - | chr1.2:63004051-63004070 | MS.gene07501:CDS | 45.0% | |
| TATAGTCTCCTGGCACTTGT+AGG | - | chr1.2:63006864-63006883 | MS.gene07501:intron | 45.0% | |
| TCAAGCGTACTTAGTCCCTA+TGG | + | chr1.2:63007791-63007810 | None:intergenic | 45.0% | |
| TCCTGATCATCCTGATACAC+CGG | - | chr1.2:63004115-63004134 | MS.gene07501:CDS | 45.0% | |
| TCTTGTCCATAAACAACCCG+AGG | + | chr1.2:63009504-63009523 | None:intergenic | 45.0% | |
| TCTTTCCCATCATGTGGATC+TGG | + | chr1.2:63007398-63007417 | None:intergenic | 45.0% | |
| TGATGTCCAGATCCACATGA+TGG | - | chr1.2:63007389-63007408 | MS.gene07501:intron | 45.0% | |
| TGGCATGTCTGAGCTAAGAA+GGG | + | chr1.2:63006669-63006688 | None:intergenic | 45.0% | |
| TGTGGTCAATCTCATGTAGC+AGG | - | chr1.2:63008251-63008270 | MS.gene07501:intron | 45.0% | |
| TTCAGTTTGCATGAGGACTG+AGG | + | chr1.2:63005659-63005678 | None:intergenic | 45.0% | |
| TTGCCCTATCCCTAAAAAGC+AGG | + | chr1.2:63008070-63008089 | None:intergenic | 45.0% | |
| ! | AACTTCCCTCGGGTTGTTTA+TGG | - | chr1.2:63009495-63009514 | MS.gene07501:CDS | 45.0% |
| ! | AGAAAGGTGTGTGACAGAGA+GGG | + | chr1.2:63005523-63005542 | None:intergenic | 45.0% |
| ! | AGTCCATCTCCATAGCTTTG+AGG | - | chr1.2:63007982-63008001 | MS.gene07501:intron | 45.0% |
| ! | AGTGTCACTAACATCTCCTC+GGG | + | chr1.2:63008633-63008652 | None:intergenic | 45.0% |
| ! | CAGAATTTTGTGTGTTGGGG+TGG | - | chr1.2:63004188-63004207 | MS.gene07501:CDS | 45.0% |
| ! | TCTGAAGTTCTCTCTTTGCC+CGG | + | chr1.2:63007348-63007367 | None:intergenic | 45.0% |
| !! | AGAGAGCTTTTGACTAGCAG+GGG | - | chr1.2:63005423-63005442 | MS.gene07501:intron | 45.0% |
| !! | GAGAGAGCTTTTGACTAGCA+GGG | - | chr1.2:63005422-63005441 | MS.gene07501:intron | 45.0% |
| !! | GCTTTGTTCGGAGGTTTTTG+TGG | - | chr1.2:63004154-63004173 | MS.gene07501:CDS | 45.0% |
| !! | GCTTTTGAGAGGGATTATGG+CGG | - | chr1.2:63003996-63004015 | MS.gene07501:CDS | 45.0% |
| !! | GGATGCAAATGGGTTAATGG+GGG | - | chr1.2:63004372-63004391 | MS.gene07501:intron | 45.0% |
| !! | GTAATAGTTTGAAGGCGTCG+AGG | - | chr1.2:63004243-63004262 | MS.gene07501:intron | 45.0% |
| !! | GTGTTAGCCTTATAGTCTCC+TGG | - | chr1.2:63006854-63006873 | MS.gene07501:intron | 45.0% |
| !!! | GCTGCTTTTGAGAGGGATTA+TGG | - | chr1.2:63003993-63004012 | MS.gene07501:CDS | 45.0% |
| !! | TTTAAAAAATATATATACAT+GGG | + | chr1.2:63006103-63006122 | None:intergenic | 5.0% |
| !!! | TTTTAAAAAATATATATACA+TGG | + | chr1.2:63006104-63006123 | None:intergenic | 5.0% |
| AAAGCTGGGGACTTGTGGTT+AGG | + | chr1.2:63005168-63005187 | None:intergenic | 50.0% | |
| AATGAGGACTGAGGAGAACC+GGG | + | chr1.2:63005566-63005585 | None:intergenic | 50.0% | |
| ACAACACCAACACGTCGACA+TGG | + | chr1.2:63004709-63004728 | None:intergenic | 50.0% | |
| AGAAGAAAGCTGGGGACTTG+TGG | + | chr1.2:63005173-63005192 | None:intergenic | 50.0% | |
| AGCCTTGCTGCAACAAGAAC+TGG | + | chr1.2:63008681-63008700 | None:intergenic | 50.0% | |
| ATATGACACGTGCCAGATGC+TGG | + | chr1.2:63007632-63007651 | None:intergenic | 50.0% | |
| ATGAAGCACGAACTCCGACA+CGG | - | chr1.2:63006889-63006908 | MS.gene07501:intron | 50.0% | |
| CAAGACACGGGTTTGAAGAG+AGG | + | chr1.2:63007558-63007577 | None:intergenic | 50.0% | |
| CCTAGGATCATGATGTGAGG+AGG | + | chr1.2:63005455-63005474 | None:intergenic | 50.0% | |
| CCTAGTCTCTAACTTCCCTC+GGG | - | chr1.2:63009485-63009504 | MS.gene07501:CDS | 50.0% | |
| CCTCCTCACATCATGATCCT+AGG | - | chr1.2:63005452-63005471 | MS.gene07501:intron | 50.0% | |
| CCTTGCTGCAACAAGAACTG+GGG | + | chr1.2:63008679-63008698 | None:intergenic | 50.0% | |
| CGAAGCTGAGAGAAAGCTCA+AGG | - | chr1.2:63008999-63009018 | MS.gene07501:intron | 50.0% | |
| CGAGCCCTAATATCGGAAAG+TGG | + | chr1.2:63007957-63007976 | None:intergenic | 50.0% | |
| CGCAGGGGAACAGTAAATAC+AGG | + | chr1.2:63004998-63005017 | None:intergenic | 50.0% | |
| CTGACCAAGTCATACTTCCC+CGG | - | chr1.2:63005545-63005564 | MS.gene07501:intron | 50.0% | |
| CTGGCATGTCTGAGCTAAGA+AGG | + | chr1.2:63006670-63006689 | None:intergenic | 50.0% | |
| CTGTGTGTATGTCCAGGCTA+GGG | - | chr1.2:63008930-63008949 | MS.gene07501:intron | 50.0% | |
| CTTCATAGCCTACAAGTGCC+AGG | + | chr1.2:63006875-63006894 | None:intergenic | 50.0% | |
| CTTGGTATTAGAGACCCGGT+TGG | + | chr1.2:63005369-63005388 | None:intergenic | 50.0% | |
| CTTTCCTTGCGCACACCATT+GGG | + | chr1.2:63009384-63009403 | None:intergenic | 50.0% | |
| GAAGCAACACTGCAAGACAC+GGG | + | chr1.2:63007570-63007589 | None:intergenic | 50.0% | |
| GAGAATCGCGCTTCTTCAAC+AGG | - | chr1.2:63004304-63004323 | MS.gene07501:intron | 50.0% | |
| GCACTCTCACTAAAGGAAGC+TGG | - | chr1.2:63009531-63009550 | MS.gene07501:CDS | 50.0% | |
| GCCTAGTCTCTAACTTCCCT+CGG | - | chr1.2:63009484-63009503 | MS.gene07501:CDS | 50.0% | |
| GCCTTGCTGCAACAAGAACT+GGG | + | chr1.2:63008680-63008699 | None:intergenic | 50.0% | |
| GGAAGCAACACTGCAAGACA+CGG | + | chr1.2:63007571-63007590 | None:intergenic | 50.0% | |
| GGGCAAAGAGAGAACTTCAG+AGG | - | chr1.2:63007347-63007366 | MS.gene07501:intron | 50.0% | |
| GGGTTTCACACACACAGAAG+TGG | - | chr1.2:63006207-63006226 | MS.gene07501:intron | 50.0% | |
| GTCTGCTGTACGTGTTCCTT+TGG | - | chr1.2:63004729-63004748 | MS.gene07501:intron | 50.0% | |
| GTGCCTAGGATCATGATGTG+AGG | + | chr1.2:63005458-63005477 | None:intergenic | 50.0% | |
| TCCGGTGTATCAGGATGATC+AGG | + | chr1.2:63004119-63004138 | None:intergenic | 50.0% | |
| TCGCGCTTCTTCAACAGGTA+TGG | - | chr1.2:63004309-63004328 | MS.gene07501:intron | 50.0% | |
| TGCCCTAACACCAACACATC+TGG | - | chr1.2:63004648-63004667 | MS.gene07501:intron | 50.0% | |
| TGTATGTCCAGGCTAGGGAA+CGG | - | chr1.2:63008935-63008954 | MS.gene07501:intron | 50.0% | |
| TGTCACTAACATCTCCTCGG+GGG | + | chr1.2:63008631-63008650 | None:intergenic | 50.0% | |
| TTGTGGTTAGGAGGCTGGAA+GGG | + | chr1.2:63005156-63005175 | None:intergenic | 50.0% | |
| TTTGAGAGGGATTATGGCGG+TGG | - | chr1.2:63003999-63004018 | MS.gene07501:CDS | 50.0% | |
| ! | AACATCTCCTCGGGGGATTT+TGG | + | chr1.2:63008624-63008643 | None:intergenic | 50.0% |
| ! | AGAACCGGGGAAGTATGACT+TGG | + | chr1.2:63005552-63005571 | None:intergenic | 50.0% |
| ! | GAGAAAGGTGTGTGACAGAG+AGG | + | chr1.2:63005524-63005543 | None:intergenic | 50.0% |
| ! | GCAGAGACGCAAATGATGGA+CGG | + | chr1.2:63005264-63005283 | None:intergenic | 50.0% |
| ! | GGGATTTTGGACCTTCAACC+TGG | + | chr1.2:63008611-63008630 | None:intergenic | 50.0% |
| ! | GTGTCACTAACATCTCCTCG+GGG | + | chr1.2:63008632-63008651 | None:intergenic | 50.0% |
| ! | TAGAAGGACGCTTTGTTCGG+AGG | - | chr1.2:63004145-63004164 | MS.gene07501:CDS | 50.0% |
| ! | TGAAGCACGGACACTGCTTT+TGG | + | chr1.2:63007709-63007728 | None:intergenic | 50.0% |
| !! | GGAGAGAGCTTTTGACTAGC+AGG | - | chr1.2:63005421-63005440 | MS.gene07501:intron | 50.0% |
| !! | GTACAGAGTAAAGGCACTGC+AGG | + | chr1.2:63009191-63009210 | None:intergenic | 50.0% |
| AAGGTGTGTGACAGAGAGGG+AGG | + | chr1.2:63005520-63005539 | None:intergenic | 55.0% | |
| AGGACACTGCTACCAGCATC+TGG | - | chr1.2:63007617-63007636 | MS.gene07501:intron | 55.0% | |
| ATGAGGACTGAGGAGAACCG+GGG | + | chr1.2:63005565-63005584 | None:intergenic | 55.0% | |
| ATGGTGTGCGCAAGGAAAGG+AGG | - | chr1.2:63009385-63009404 | MS.gene07501:CDS | 55.0% | |
| CATGAGGACTGAGGAGAACC+GGG | + | chr1.2:63005650-63005669 | None:intergenic | 55.0% | |
| CCAATGGTGTGCGCAAGGAA+AGG | - | chr1.2:63009382-63009401 | MS.gene07501:CDS | 55.0% | |
| CCCCAGTTCTTGTTGCAGCA+AGG | - | chr1.2:63008676-63008695 | MS.gene07501:intron | 55.0% | |
| CCCGAGGGAAGTTAGAGACT+AGG | + | chr1.2:63009488-63009507 | None:intergenic | 55.0% | |
| CCTTTCCTTGCGCACACCAT+TGG | + | chr1.2:63009385-63009404 | None:intergenic | 55.0% | |
| CTTGTGGTTAGGAGGCTGGA+AGG | + | chr1.2:63005157-63005176 | None:intergenic | 55.0% | |
| GCATGAGGACTGAGGAGAAC+CGG | + | chr1.2:63005651-63005670 | None:intergenic | 55.0% | |
| GCTGGTAGCAGTGTCCTGAA+AGG | + | chr1.2:63007614-63007633 | None:intergenic | 55.0% | |
| GCTGTGTGTATGTCCAGGCT+AGG | - | chr1.2:63008929-63008948 | MS.gene07501:intron | 55.0% | |
| GGAACGGCAGAGAAGAGAAG+AGG | - | chr1.2:63008951-63008970 | MS.gene07501:intron | 55.0% | |
| GGAAGCTGGATTGCATCCTC+AGG | - | chr1.2:63009545-63009564 | MS.gene07501:CDS | 55.0% | |
| GTCCGTGCTTCAGAGCTTGT+GGG | - | chr1.2:63007717-63007736 | MS.gene07501:intron | 55.0% | |
| GTTTCCCAATGGTGTGCGCA+AGG | - | chr1.2:63009377-63009396 | MS.gene07501:CDS | 55.0% | |
| TCCTCAGGCCAGTCTGTTTG+TGG | - | chr1.2:63009560-63009579 | MS.gene07501:CDS | 55.0% | |
| TGAAGGTCCAAAATCCCCCG+AGG | - | chr1.2:63008614-63008633 | MS.gene07501:intron | 55.0% | |
| TGTCCGTGCTTCAGAGCTTG+TGG | - | chr1.2:63007716-63007735 | MS.gene07501:intron | 55.0% | |
| TGTGGTTAGGAGGCTGGAAG+GGG | + | chr1.2:63005155-63005174 | None:intergenic | 55.0% | |
| ! | GTGTTGGTGCGGTTTCCCAA+TGG | - | chr1.2:63009366-63009385 | MS.gene07501:CDS | 55.0% |
| !! | GTCCCACAAGCTCTGAAGCA+CGG | + | chr1.2:63007722-63007741 | None:intergenic | 55.0% |
| !! | GTTGGTGTTAGGGCAGTGTC+AGG | + | chr1.2:63004643-63004662 | None:intergenic | 55.0% |
| !! | TCCACAAACAGACTGGCCTG+AGG | + | chr1.2:63009564-63009583 | None:intergenic | 55.0% |
| GCTGGGGACTTGTGGTTAGG+AGG | + | chr1.2:63005165-63005184 | None:intergenic | 60.0% | |
| GGCTCGTGAAAGAGCAGCAC+AGG | - | chr1.2:63009032-63009051 | MS.gene07501:intron | 60.0% | |
| GGGACTTGTGGTTAGGAGGC+TGG | + | chr1.2:63005161-63005180 | None:intergenic | 60.0% | |
| GGTGTTAGGGCAGTGTCAGG+TGG | + | chr1.2:63004640-63004659 | None:intergenic | 60.0% | |
| GTTAGGGCAGTGTCAGGTGG+AGG | + | chr1.2:63004637-63004656 | None:intergenic | 60.0% | |
| TGGATGCGTTACAGCGGTCG+AGG | - | chr1.2:63004057-63004076 | MS.gene07501:CDS | 60.0% | |
| TTCTCTGCCGTTCCCTAGCC+TGG | + | chr1.2:63008945-63008964 | None:intergenic | 60.0% | |
| CGGCGTCGTTGTGTCCGTGT+CGG | + | chr1.2:63006906-63006925 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 63003981 | 63009596 | 63003981 | ID=MS.gene07501 |
| chr1.2 | mRNA | 63003981 | 63009596 | 63003981 | ID=MS.gene07501.t1;Parent=MS.gene07501 |
| chr1.2 | exon | 63009252 | 63009596 | 63009252 | ID=MS.gene07501.t1.exon1;Parent=MS.gene07501.t1 |
| chr1.2 | CDS | 63009252 | 63009596 | 63009252 | ID=cds.MS.gene07501.t1;Parent=MS.gene07501.t1 |
| chr1.2 | exon | 63004795 | 63004965 | 63004795 | ID=MS.gene07501.t1.exon2;Parent=MS.gene07501.t1 |
| chr1.2 | CDS | 63004795 | 63004965 | 63004795 | ID=cds.MS.gene07501.t1;Parent=MS.gene07501.t1 |
| chr1.2 | exon | 63004428 | 63004631 | 63004428 | ID=MS.gene07501.t1.exon3;Parent=MS.gene07501.t1 |
| chr1.2 | CDS | 63004428 | 63004631 | 63004428 | ID=cds.MS.gene07501.t1;Parent=MS.gene07501.t1 |
| chr1.2 | exon | 63003981 | 63004211 | 63003981 | ID=MS.gene07501.t1.exon4;Parent=MS.gene07501.t1 |
| chr1.2 | CDS | 63003981 | 63004211 | 63003981 | ID=cds.MS.gene07501.t1;Parent=MS.gene07501.t1 |
| Gene Sequence |
| Protein sequence |
