Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08010.t1 | XP_013451947.1 | 96.4 | 361 | 13 | 0 | 1 | 361 | 1 | 361 | 7.10E-202 | 713 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08010.t1 | Q9SZ83 | 62.7 | 359 | 134 | 0 | 1 | 359 | 1 | 359 | 4.4e-136 | 485.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08010.t1 | A0A072UJH2 | 96.4 | 361 | 13 | 0 | 1 | 361 | 1 | 361 | 5.1e-202 | 713.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene08010 | 0.816348 | 5.79E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene08010 | 0.817925 | 2.56E-52 | -1.69E-46 |
| MS.gene049661 | MS.gene08010 | 0.819985 | 8.71E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene08010 | 0.806537 | 7.84E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene08010 | 0.811465 | 6.91E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene08010 | 0.813975 | 1.95E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene08010 | 0.802475 | 5.51E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene08010 | 0.804292 | 2.32E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene08010 | 0.831727 | 1.42E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene08010 | 0.807055 | 6.09E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene08010 | 0.810818 | 9.54E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene08010 | 0.811174 | 7.99E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene08010 | 0.806938 | 6.45E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene08010 | 0.810472 | 1.13E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene08010 | 0.801585 | 8.40E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene08010 | 0.825425 | 4.72E-54 | -1.69E-46 |
| MS.gene054803 | MS.gene08010 | 0.826469 | 2.67E-54 | -1.69E-46 |
| MS.gene054804 | MS.gene08010 | 0.827024 | 1.97E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene08010 | 0.806304 | 8.78E-50 | -1.69E-46 |
| MS.gene055397 | MS.gene08010 | 0.847987 | 8.17E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene08010 | 0.825027 | 5.86E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene08010 | 0.813844 | 2.08E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene08010 | 0.829788 | 4.23E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene08010 | 0.822308 | 2.54E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene08010 | 0.845416 | 4.12E-59 | -1.69E-46 |
| MS.gene058993 | MS.gene08010 | 0.830567 | 2.73E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene08010 | 0.810221 | 1.28E-50 | -1.69E-46 |
| MS.gene059692 | MS.gene08010 | 0.815345 | 9.70E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene08010 | 0.823938 | 1.06E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene08010 | 0.839728 | 1.33E-57 | -1.69E-46 |
| MS.gene060818 | MS.gene08010 | 0.800888 | 1.17E-48 | -1.69E-46 |
| MS.gene061041 | MS.gene08010 | 0.807944 | 3.95E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene08010 | 0.829773 | 4.27E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08010.t1 | MTR_6g038640 | 96.399 | 361 | 13 | 0 | 1 | 361 | 1 | 361 | 0.0 | 726 |
| MS.gene08010.t1 | MTR_6g038650 | 91.967 | 361 | 24 | 2 | 1 | 361 | 1 | 356 | 0.0 | 684 |
| MS.gene08010.t1 | MTR_1g097250 | 70.141 | 355 | 106 | 0 | 7 | 361 | 6 | 360 | 0.0 | 536 |
| MS.gene08010.t1 | MTR_6g038390 | 61.173 | 358 | 139 | 0 | 3 | 360 | 5 | 362 | 1.07e-171 | 482 |
| MS.gene08010.t1 | MTR_6g038350 | 62.570 | 358 | 134 | 0 | 3 | 360 | 5 | 362 | 4.58e-166 | 468 |
| MS.gene08010.t1 | MTR_6g038370 | 62.570 | 358 | 134 | 0 | 3 | 360 | 5 | 362 | 4.58e-166 | 468 |
| MS.gene08010.t1 | MTR_6g066230 | 54.545 | 363 | 160 | 2 | 1 | 359 | 1 | 362 | 2.14e-146 | 418 |
| MS.gene08010.t1 | MTR_3g064900 | 54.545 | 363 | 161 | 2 | 1 | 359 | 1 | 363 | 9.48e-141 | 404 |
| MS.gene08010.t1 | MTR_6g038310 | 63.115 | 122 | 44 | 1 | 3 | 123 | 5 | 126 | 9.72e-42 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08010.t1 | AT4G09670 | 62.674 | 359 | 134 | 0 | 1 | 359 | 1 | 359 | 2.80e-177 | 496 |
| MS.gene08010.t1 | AT1G34200 | 56.704 | 358 | 143 | 2 | 1 | 357 | 1 | 347 | 1.45e-147 | 421 |
| MS.gene08010.t1 | AT1G66130 | 42.896 | 366 | 200 | 6 | 1 | 359 | 1 | 364 | 7.51e-97 | 292 |
Find 100 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCGGTGCTTCTTTATAC+TGG | 0.166044 | 6.3:+33164500 | MS.gene08010:CDS |
| CCTTTCATCACCTCCGTTCT+AGG | 0.180039 | 6.3:-33161949 | None:intergenic |
| GGAATGTGGGGTGCAGTTTA+TGG | 0.217349 | 6.3:+33161903 | MS.gene08010:CDS |
| GAATGGCGCGTGAGAGTTTC+CGG | 0.217739 | 6.3:-33161600 | None:intergenic |
| TTCATAGGAGCCGTAGATTT+TGG | 0.245108 | 6.3:-33161716 | None:intergenic |
| TGGAGGATGGGGAGAGGTTT+GGG | 0.268141 | 6.3:+33161977 | MS.gene08010:CDS |
| CCAATCCGTTTCGGCATTCT+CGG | 0.279201 | 6.3:+33161562 | MS.gene08010:CDS |
| TTGGAGGATGGGGAGAGGTT+TGG | 0.291790 | 6.3:+33161976 | MS.gene08010:CDS |
| ACGAAGGATGGTATTGTGTT+AGG | 0.316467 | 6.3:+33164389 | MS.gene08010:CDS |
| CTCGACGCTCTTGGCTCTCT+TGG | 0.317455 | 6.3:+33164364 | MS.gene08010:CDS |
| TAGGAAAACACAACTGATAT+TGG | 0.320047 | 6.3:+33164837 | MS.gene08010:CDS |
| ATGTCGTTCTCGAGAAATTC+AGG | 0.322390 | 6.3:-33164325 | None:intergenic |
| TTGATGATCTTGTCACTAGA+TGG | 0.323932 | 6.3:+33164680 | MS.gene08010:CDS |
| TCTACCTCAGGAGGCTCTTA+TGG | 0.340576 | 6.3:+33164738 | MS.gene08010:CDS |
| CAGCAGTTACATCCATTGTT+AGG | 0.343645 | 6.3:-33164567 | None:intergenic |
| ACGTAAACAGCATCAACATT+AGG | 0.358563 | 6.3:-33161754 | None:intergenic |
| CGACGACGTTGCATGTGAAA+TGG | 0.359695 | 6.3:+33161785 | MS.gene08010:CDS |
| TGCCACCAAACGAGAAAATT+CGG | 0.372855 | 6.3:-33164764 | None:intergenic |
| GCGGTGGCTGCGGCGAAGAA+AGG | 0.393445 | 6.3:+33161808 | MS.gene08010:CDS |
| CGTGAAGGCTTCGATTGATA+AGG | 0.393685 | 6.3:+33164864 | MS.gene08010:CDS |
| GAGCCAAGAGCGTCGAGATC+CGG | 0.396802 | 6.3:-33164358 | None:intergenic |
| ATTGTCGGCCATTTCTTCTC+TGG | 0.397395 | 6.3:-33164811 | None:intergenic |
| GTTTGCGAAGGTGGTAGCTT+TGG | 0.400604 | 6.3:-33161671 | None:intergenic |
| GTAACTGCTGTTGGGACAAA+AGG | 0.412074 | 6.3:+33164580 | MS.gene08010:CDS |
| ATCAGCACCAAATGTAAAAC+AGG | 0.414584 | 6.3:-33164302 | None:intergenic |
| AAGCCGGATCTCGACGCTCT+TGG | 0.424532 | 6.3:+33164355 | MS.gene08010:CDS |
| CTTATCAATCGAAGCCTTCA+CGG | 0.426797 | 6.3:-33164863 | None:intergenic |
| GGCGGTGGGAGGGAAGTTGT+TGG | 0.426867 | 6.3:-33161695 | None:intergenic |
| TGATGATCTTGTCACTAGAT+GGG | 0.427776 | 6.3:+33164681 | MS.gene08010:CDS |
| GTGAAGGCTTCGATTGATAA+GGG | 0.431741 | 6.3:+33164865 | MS.gene08010:CDS |
| GAGGTTTGGGAAGGTTAAAT+CGG | 0.438030 | 6.3:+33161990 | MS.gene08010:CDS |
| ACGCTAAACCAGAGAAGAAA+TGG | 0.440395 | 6.3:+33164803 | MS.gene08010:CDS |
| CGAAGGATGGTATTGTGTTA+GGG | 0.443488 | 6.3:+33164390 | MS.gene08010:CDS |
| CGTAAACAGCATCAACATTA+GGG | 0.444017 | 6.3:-33161753 | None:intergenic |
| CGGTGGCTGCGGCGAAGAAA+GGG | 0.460548 | 6.3:+33161809 | MS.gene08010:CDS |
| TGTGAAATGGGCGGTGGCTG+CGG | 0.466954 | 6.3:+33161798 | MS.gene08010:CDS |
| TGAAGGTGTGTGAGGAATGT+GGG | 0.467660 | 6.3:+33161890 | MS.gene08010:CDS |
| GTTGTTGGAGTTTGCGAAGG+TGG | 0.473682 | 6.3:-33161680 | None:intergenic |
| CCGAGAATGCCGAAACGGAT+TGG | 0.477746 | 6.3:-33161562 | None:intergenic |
| GACGACGTTGCATGTGAAAT+GGG | 0.478723 | 6.3:+33161786 | MS.gene08010:CDS |
| GCGGCTGCCGACGGCGGAGA+TGG | 0.479896 | 6.3:-33161641 | None:intergenic |
| TCGGTTGTGCCGACATAGCC+CGG | 0.480892 | 6.3:+33161581 | MS.gene08010:CDS |
| GCTCTCTTGGCGACGAAGGA+TGG | 0.484511 | 6.3:+33164377 | MS.gene08010:CDS |
| GCTTCTTTATACTGGGATGA+TGG | 0.488228 | 6.3:+33164508 | MS.gene08010:CDS |
| TTGCGGTGCTTCTTTATACT+GGG | 0.492053 | 6.3:+33164501 | MS.gene08010:CDS |
| GGAGAAGGTGCGGCTGCCGA+CGG | 0.492294 | 6.3:-33161650 | None:intergenic |
| GAACGACATTCGTGTGAAGC+CGG | 0.497034 | 6.3:+33164339 | MS.gene08010:CDS |
| ACTCCTGCTTTATTAAGCAC+TGG | 0.497586 | 6.3:-33164469 | None:intergenic |
| AGAAATGGCCGACAATTAGT+AGG | 0.498713 | 6.3:+33164818 | MS.gene08010:CDS |
| ACAATGGATGTAACTGCTGT+TGG | 0.503165 | 6.3:+33164571 | MS.gene08010:CDS |
| TGTGGGGTGCAGTTTATGGA+TGG | 0.503410 | 6.3:+33161907 | MS.gene08010:CDS |
| GATGATCTTGTCACTAGATG+GGG | 0.507725 | 6.3:+33164682 | MS.gene08010:CDS |
| GACGGCGGAGATGGTGGCGG+TGG | 0.510369 | 6.3:-33161632 | None:intergenic |
| CAATGGATGTAACTGCTGTT+GGG | 0.512110 | 6.3:+33164572 | MS.gene08010:CDS |
| AATGCCGAAACGGATTGGTT+CGG | 0.512845 | 6.3:-33161557 | None:intergenic |
| GTGAAGGTGTGTGAGGAATG+TGG | 0.518546 | 6.3:+33161889 | MS.gene08010:CDS |
| TTGTGTTAGGGCAATTCTGT+GGG | 0.521428 | 6.3:+33164402 | MS.gene08010:CDS |
| CAAACCGAACCAATCCGTTT+CGG | 0.521658 | 6.3:+33161553 | MS.gene08010:CDS |
| CTTGGCTCTCTTGGCGACGA+AGG | 0.521752 | 6.3:+33164373 | MS.gene08010:CDS |
| TTTCATTCCTGAATCTGTAC+AGG | 0.527130 | 6.3:-33164895 | None:intergenic |
| GCCGACGGCGGAGATGGTGG+CGG | 0.536667 | 6.3:-33161635 | None:intergenic |
| CCTAGAACGGAGGTGATGAA+AGG | 0.540547 | 6.3:+33161949 | MS.gene08010:CDS |
| GCTGCCGACGGCGGAGATGG+TGG | 0.542916 | 6.3:-33161638 | None:intergenic |
| ATTGTGTTAGGGCAATTCTG+TGG | 0.545531 | 6.3:+33164401 | MS.gene08010:CDS |
| CACAACCGAGAATGCCGAAA+CGG | 0.548896 | 6.3:-33161567 | None:intergenic |
| ATTAAGCACTGGTTCGCGCG+TGG | 0.550250 | 6.3:-33164458 | None:intergenic |
| TCCTTCACACTCACCGCCAC+CGG | 0.551126 | 6.3:-33161853 | None:intergenic |
| ACATGCAACGTCGTCGGTAA+CGG | 0.555872 | 6.3:-33161778 | None:intergenic |
| TTTCTTATCTAACCTAACAA+TGG | 0.559985 | 6.3:+33164555 | MS.gene08010:CDS |
| AGATGGTGGCGGTGGAAGAG+AGG | 0.563398 | 6.3:-33161624 | None:intergenic |
| CTAGAACGGAGGTGATGAAA+GGG | 0.568382 | 6.3:+33161950 | MS.gene08010:CDS |
| ACCGCCACCATCTCCGCCGT+CGG | 0.570452 | 6.3:+33161634 | MS.gene08010:CDS |
| AATGGCGCGTGAGAGTTTCC+GGG | 0.570788 | 6.3:-33161599 | None:intergenic |
| CCTCCCACCGCCAAAATCTA+CGG | 0.577677 | 6.3:+33161706 | MS.gene08010:CDS |
| GCCGGTGGCGGTGAGTGTGA+AGG | 0.578175 | 6.3:+33161852 | MS.gene08010:CDS |
| AATAGAAAACGATCTACCTC+AGG | 0.582291 | 6.3:+33164726 | MS.gene08010:CDS |
| GGCGGTGGAAGAGAGGAGAA+TGG | 0.589254 | 6.3:-33161617 | None:intergenic |
| GAAGTTGTTGGAGTTTGCGA+AGG | 0.594720 | 6.3:-33161683 | None:intergenic |
| GAACCAGTGCTTAATAAAGC+AGG | 0.597589 | 6.3:+33164466 | MS.gene08010:CDS |
| GGATGGGGAGAGGTTTGGGA+AGG | 0.597821 | 6.3:+33161981 | MS.gene08010:CDS |
| ACTGATATTGGACGCCGTGA+AGG | 0.597831 | 6.3:+33164849 | MS.gene08010:CDS |
| TTTGTTGGAGAAGCCGGTGG+CGG | 0.598909 | 6.3:+33161840 | MS.gene08010:CDS |
| GAAGGTGCGGCTGCCGACGG+CGG | 0.599980 | 6.3:-33161647 | None:intergenic |
| GTCGTCAAGAACTTCTTCAT+AGG | 0.601925 | 6.3:-33161731 | None:intergenic |
| GTTGCATGTGAAATGGGCGG+TGG | 0.605659 | 6.3:+33161792 | MS.gene08010:CDS |
| TGAGAGTTTCCGGGCTATGT+CGG | 0.612732 | 6.3:-33161590 | None:intergenic |
| GTGGGGTGCAGTTTATGGAT+GGG | 0.617072 | 6.3:+33161908 | MS.gene08010:CDS |
| GAAGGTGGTAGCTTTGGAGA+AGG | 0.621017 | 6.3:-33161665 | None:intergenic |
| AGAAAACGATCTACCTCAGG+AGG | 0.623275 | 6.3:+33164729 | MS.gene08010:CDS |
| GGAGTTTGATGAGATTGTGA+AGG | 0.628031 | 6.3:+33161873 | MS.gene08010:CDS |
| GTGGATGCATCATCCTAGAA+CGG | 0.629139 | 6.3:+33161936 | MS.gene08010:CDS |
| TGAGATTGTGAAGGTGTGTG+AGG | 0.632007 | 6.3:+33161882 | MS.gene08010:CDS |
| GAAGGTGTGTGAGGAATGTG+GGG | 0.637070 | 6.3:+33161891 | MS.gene08010:CDS |
| TGGTAGCTTTGGAGAAGGTG+CGG | 0.641124 | 6.3:-33161660 | None:intergenic |
| CATTTCACATGCAACGTCGT+CGG | 0.650632 | 6.3:-33161784 | None:intergenic |
| AGTTTATGGATGGGACTATG+TGG | 0.660551 | 6.3:+33161917 | MS.gene08010:CDS |
| GATGCATCATCCTAGAACGG+AGG | 0.667515 | 6.3:+33161939 | MS.gene08010:CDS |
| GCAGGAGTGATTCTATCTTG+CGG | 0.669495 | 6.3:+33164484 | MS.gene08010:CDS |
| GTTACCATAAGAGCCTCCTG+AGG | 0.738420 | 6.3:-33164742 | None:intergenic |
| GACGTTGCATGTGAAATGGG+CGG | 0.751365 | 6.3:+33161789 | MS.gene08010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAAGATTAGTATAAATT+AGG | + | chr6.3:33162824-33162843 | MS.gene08010:intron | 15.0% |
| !! | TTTAATGTAATTATATGTGT+TGG | + | chr6.3:33163934-33163953 | MS.gene08010:intron | 15.0% |
| !!! | TAAGAAAATATAAGCTTTTT+GGG | + | chr6.3:33162114-33162133 | MS.gene08010:intron | 15.0% |
| !!! | TTAAGAAAATATAAGCTTTT+TGG | + | chr6.3:33162113-33162132 | MS.gene08010:intron | 15.0% |
| !!! | TTATTTTCTCAAATTATTAG+CGG | - | chr6.3:33163909-33163928 | None:intergenic | 15.0% |
| !! | AAATTGTTCAAATTTACACA+AGG | - | chr6.3:33164107-33164126 | None:intergenic | 20.0% |
| !! | AATTGTTCAAATTTACACAA+GGG | - | chr6.3:33164106-33164125 | None:intergenic | 20.0% |
| !! | ACATTAATATATCAGACTAT+CGG | - | chr6.3:33162911-33162930 | None:intergenic | 20.0% |
| !! | ACTTTATCTATCAAAGTTAT+AGG | + | chr6.3:33163179-33163198 | MS.gene08010:intron | 20.0% |
| !! | TAAATCAATTCAGATGAATT+TGG | + | chr6.3:33163294-33163313 | MS.gene08010:intron | 20.0% |
| !! | TAGTTAATATCTATGAAACA+CGG | - | chr6.3:33164012-33164031 | None:intergenic | 20.0% |
| !! | TATGAAAGTCAAATTACTTT+AGG | + | chr6.3:33163228-33163247 | MS.gene08010:intron | 20.0% |
| !!! | GATTTAGTGATTTTTTGTTA+GGG | + | chr6.3:33162348-33162367 | MS.gene08010:intron | 20.0% |
| !!! | TAATTTGACTTTCATATACT+TGG | - | chr6.3:33163224-33163243 | None:intergenic | 20.0% |
| !!! | TGATTTAGTGATTTTTTGTT+AGG | + | chr6.3:33162347-33162366 | MS.gene08010:intron | 20.0% |
| !!! | TGATTTATGAAACATGATTT+TGG | + | chr6.3:33162682-33162701 | MS.gene08010:intron | 20.0% |
| !!! | TGTTATGGATTAATTTTTAG+AGG | + | chr6.3:33162705-33162724 | MS.gene08010:intron | 20.0% |
| !!! | TTCATCTGAATTGATTTAAT+TGG | - | chr6.3:33163292-33163311 | None:intergenic | 20.0% |
| !!! | TTGTTACGGATTATAAAAAA+GGG | + | chr6.3:33162739-33162758 | MS.gene08010:intron | 20.0% |
| !!! | TTTGTTACGGATTATAAAAA+AGG | + | chr6.3:33162738-33162757 | MS.gene08010:intron | 20.0% |
| ! | AAACATGAGATACTGAAATT+AGG | + | chr6.3:33162862-33162881 | MS.gene08010:intron | 25.0% |
| ! | AGAAGAGATAAAAAAATTCC+TGG | + | chr6.3:33163615-33163634 | MS.gene08010:intron | 25.0% |
| ! | AGTATAAATTAGGAGAATGT+AGG | + | chr6.3:33162834-33162853 | MS.gene08010:intron | 25.0% |
| ! | AGTTATCTAAATTCTATAGC+AGG | - | chr6.3:33163490-33163509 | None:intergenic | 25.0% |
| ! | CATAATTTATGAGTCTCTAA+GGG | - | chr6.3:33163798-33163817 | None:intergenic | 25.0% |
| ! | GTATAAATTAGGAGAATGTA+GGG | + | chr6.3:33162835-33162854 | MS.gene08010:intron | 25.0% |
| ! | TAATTCAGAATCATAACTGT+TGG | - | chr6.3:33164187-33164206 | None:intergenic | 25.0% |
| ! | TCAACTTCATTTCGTAAATT+TGG | + | chr6.3:33163451-33163470 | MS.gene08010:intron | 25.0% |
| ! | TCATAATTTATGAGTCTCTA+AGG | - | chr6.3:33163799-33163818 | None:intergenic | 25.0% |
| ! | TTAAGAAAATAGAAGCGATT+CGG | + | chr6.3:33162582-33162601 | MS.gene08010:intron | 25.0% |
| ! | TTTCTTATCTAACCTAACAA+TGG | + | chr6.3:33164555-33164574 | MS.gene08010:CDS | 25.0% |
| !! | AAAGGGACTAAATTCATTTT+CGG | + | chr6.3:33163425-33163444 | MS.gene08010:intron | 25.0% |
| !! | AATGGTATAACTTTCTGTTT+TGG | - | chr6.3:33164058-33164077 | None:intergenic | 25.0% |
| !! | CAATTTTATCTTAAGCCAAA+AGG | - | chr6.3:33163660-33163679 | None:intergenic | 25.0% |
| !! | GTAATTATATGTGTTGGTAT+CGG | + | chr6.3:33163940-33163959 | MS.gene08010:intron | 25.0% |
| !! | TTTTCTATTATGTGCTTACT+CGG | - | chr6.3:33164715-33164734 | None:intergenic | 25.0% |
| !!! | TCTGTTTTGGTTCTTAATTT+TGG | - | chr6.3:33164045-33164064 | None:intergenic | 25.0% |
| ACAAGGACATTTGATATGTT+GGG | - | chr6.3:33163063-33163082 | None:intergenic | 30.0% | |
| ACTTCATTTCGTAAATTTGG+AGG | + | chr6.3:33163454-33163473 | MS.gene08010:intron | 30.0% | |
| AGTTTCTATACCACATGAAA+TGG | + | chr6.3:33163126-33163145 | MS.gene08010:intron | 30.0% | |
| ATGAAACTAGAAGTGATGTA+GGG | + | chr6.3:33162647-33162666 | MS.gene08010:intron | 30.0% | |
| ATTTGATATGTTGGGAACTT+GGG | - | chr6.3:33163055-33163074 | None:intergenic | 30.0% | |
| CAATAGTTGCAAGTTTAAGT+TGG | + | chr6.3:33163551-33163570 | MS.gene08010:intron | 30.0% | |
| GTTTCTATACCACATGAAAT+GGG | + | chr6.3:33163127-33163146 | MS.gene08010:intron | 30.0% | |
| TAACCTATGAAGCATAGATA+CGG | + | chr6.3:33163842-33163861 | MS.gene08010:intron | 30.0% | |
| TAAGAAAATAGAAGCGATTC+GGG | + | chr6.3:33162583-33162602 | MS.gene08010:intron | 30.0% | |
| TACAAGGACATTTGATATGT+TGG | - | chr6.3:33163064-33163083 | None:intergenic | 30.0% | |
| TAGGAAAACACAACTGATAT+TGG | + | chr6.3:33164837-33164856 | MS.gene08010:CDS | 30.0% | |
| TATGAAACTAGAAGTGATGT+AGG | + | chr6.3:33162646-33162665 | MS.gene08010:intron | 30.0% | |
| TCAAAGTTATAGGAGTTAGA+TGG | + | chr6.3:33163189-33163208 | MS.gene08010:intron | 30.0% | |
| TCAAATTTACACAAGGGAAA+GGG | - | chr6.3:33164100-33164119 | None:intergenic | 30.0% | |
| TTCAAATTTACACAAGGGAA+AGG | - | chr6.3:33164101-33164120 | None:intergenic | 30.0% | |
| ! | ATGCTGTCTTTTCTTCATAA+GGG | - | chr6.3:33164633-33164652 | None:intergenic | 30.0% |
| ! | ATTCACACCTGTTTTACATT+TGG | + | chr6.3:33164295-33164314 | MS.gene08010:CDS | 30.0% |
| ! | GAATTGATTTAATTGGCTGA+AGG | - | chr6.3:33163285-33163304 | None:intergenic | 30.0% |
| ! | TGTGTTTTCCTACTAATTGT+CGG | - | chr6.3:33164829-33164848 | None:intergenic | 30.0% |
| !! | AAGCTTTTTGGGAATGAAAT+CGG | + | chr6.3:33162125-33162144 | MS.gene08010:intron | 30.0% |
| !!! | GAAACATGATTTTGGTGTTA+TGG | + | chr6.3:33162690-33162709 | MS.gene08010:intron | 30.0% |
| !!! | GTTTTTTCACACACTAATTG+CGG | + | chr6.3:33162997-33163016 | MS.gene08010:intron | 30.0% |
| AAAACTCAGCATTTCTGATC+CGG | + | chr6.3:33163394-33163413 | MS.gene08010:intron | 35.0% | |
| AAGAAAATAGAAGCGATTCG+GGG | + | chr6.3:33162584-33162603 | MS.gene08010:intron | 35.0% | |
| AATAGAAAACGATCTACCTC+AGG | + | chr6.3:33164726-33164745 | MS.gene08010:CDS | 35.0% | |
| ACGTAAACAGCATCAACATT+AGG | - | chr6.3:33161757-33161776 | None:intergenic | 35.0% | |
| AGCATTACTTGACATTAACC+AGG | - | chr6.3:33163636-33163655 | None:intergenic | 35.0% | |
| ATCAGCACCAAATGTAAAAC+AGG | - | chr6.3:33164305-33164324 | None:intergenic | 35.0% | |
| CATTTGATATGTTGGGAACT+TGG | - | chr6.3:33163056-33163075 | None:intergenic | 35.0% | |
| CGTAAACAGCATCAACATTA+GGG | - | chr6.3:33161756-33161775 | None:intergenic | 35.0% | |
| TCGATTGCTAGGAATTATGA+AGG | + | chr6.3:33162422-33162441 | MS.gene08010:intron | 35.0% | |
| TGATGATCTTGTCACTAGAT+GGG | + | chr6.3:33164681-33164700 | MS.gene08010:CDS | 35.0% | |
| TGATTTAATTGGCTGAAGGA+AGG | - | chr6.3:33163281-33163300 | None:intergenic | 35.0% | |
| TGTATTTGATGAAGATGCCT+TGG | + | chr6.3:33163764-33163783 | MS.gene08010:intron | 35.0% | |
| TTAGTCCCTTTGAATCTAAC+CGG | - | chr6.3:33163416-33163435 | None:intergenic | 35.0% | |
| TTTGATATGTTGGGAACTTG+GGG | - | chr6.3:33163054-33163073 | None:intergenic | 35.0% | |
| ! | GATGCTGTCTTTTCTTCATA+AGG | - | chr6.3:33164634-33164653 | None:intergenic | 35.0% |
| ! | TAGAGTGGTTCTGTATGTAA+AGG | + | chr6.3:33163583-33163602 | MS.gene08010:intron | 35.0% |
| ! | TGTCAAGTAATGCTTCCTTT+TGG | + | chr6.3:33163642-33163661 | MS.gene08010:intron | 35.0% |
| ! | TTGATGATCTTGTCACTAGA+TGG | + | chr6.3:33164680-33164699 | MS.gene08010:CDS | 35.0% |
| ! | TTTATGAGTCTCTAAGGGAA+AGG | - | chr6.3:33163793-33163812 | None:intergenic | 35.0% |
| !! | AGGTTAGAGCACTTTTGTTA+CGG | + | chr6.3:33162725-33162744 | MS.gene08010:intron | 35.0% |
| AACTGCTACATAGAACAGAG+CGG | - | chr6.3:33162972-33162991 | None:intergenic | 40.0% | |
| ACAATGGATGTAACTGCTGT+TGG | + | chr6.3:33164571-33164590 | MS.gene08010:CDS | 40.0% | |
| ACCATTGATGTCAGTCTATC+AGG | + | chr6.3:33164072-33164091 | MS.gene08010:intron | 40.0% | |
| ACGAAGGATGGTATTGTGTT+AGG | + | chr6.3:33164389-33164408 | MS.gene08010:CDS | 40.0% | |
| ACGCTAAACCAGAGAAGAAA+TGG | + | chr6.3:33164803-33164822 | MS.gene08010:CDS | 40.0% | |
| AGAAATGGCCGACAATTAGT+AGG | + | chr6.3:33164818-33164837 | MS.gene08010:CDS | 40.0% | |
| AGTTTAAGAGCTCGATTGCT+AGG | + | chr6.3:33162411-33162430 | MS.gene08010:intron | 40.0% | |
| AGTTTATGGATGGGACTATG+TGG | + | chr6.3:33161917-33161936 | MS.gene08010:CDS | 40.0% | |
| ATGAAGCATAGATACGGACA+CGG | + | chr6.3:33163848-33163867 | MS.gene08010:intron | 40.0% | |
| ATGTCGTTCTCGAGAAATTC+AGG | - | chr6.3:33164328-33164347 | None:intergenic | 40.0% | |
| ATTGTGTTAGGGCAATTCTG+TGG | + | chr6.3:33164401-33164420 | MS.gene08010:CDS | 40.0% | |
| CAAGTTTGAGCAGGTTAACT+CGG | + | chr6.3:33162464-33162483 | MS.gene08010:intron | 40.0% | |
| CAATGGATGTAACTGCTGTT+GGG | + | chr6.3:33164572-33164591 | MS.gene08010:CDS | 40.0% | |
| CAGCAGTTACATCCATTGTT+AGG | - | chr6.3:33164570-33164589 | None:intergenic | 40.0% | |
| CCATTGATGTCAGTCTATCA+GGG | + | chr6.3:33164073-33164092 | MS.gene08010:intron | 40.0% | |
| CGAAGGATGGTATTGTGTTA+GGG | + | chr6.3:33164390-33164409 | MS.gene08010:CDS | 40.0% | |
| CTGATCCGGTTAGATTCAAA+GGG | + | chr6.3:33163408-33163427 | MS.gene08010:intron | 40.0% | |
| CTTATCAATCGAAGCCTTCA+CGG | - | chr6.3:33164866-33164885 | None:intergenic | 40.0% | |
| CTTGGCGTTTCTGAATCAAA+TGG | + | chr6.3:33163734-33163753 | MS.gene08010:intron | 40.0% | |
| GAACCAGTGCTTAATAAAGC+AGG | + | chr6.3:33164466-33164485 | MS.gene08010:CDS | 40.0% | |
| GAGGTTTGGGAAGGTTAAAT+CGG | + | chr6.3:33161990-33162009 | MS.gene08010:CDS | 40.0% | |
| GATGATCTTGTCACTAGATG+GGG | + | chr6.3:33164682-33164701 | MS.gene08010:CDS | 40.0% | |
| GCTTCTTTATACTGGGATGA+TGG | + | chr6.3:33164508-33164527 | MS.gene08010:CDS | 40.0% | |
| GGAGTTTGATGAGATTGTGA+AGG | + | chr6.3:33161873-33161892 | MS.gene08010:CDS | 40.0% | |
| GTCGTCAAGAACTTCTTCAT+AGG | - | chr6.3:33161734-33161753 | None:intergenic | 40.0% | |
| GTGAAGGCTTCGATTGATAA+GGG | + | chr6.3:33164865-33164884 | MS.gene08010:CDS | 40.0% | |
| TCAGTCGATAAAAGGCTACA+AGG | - | chr6.3:33163080-33163099 | None:intergenic | 40.0% | |
| TCTGATCCGGTTAGATTCAA+AGG | + | chr6.3:33163407-33163426 | MS.gene08010:intron | 40.0% | |
| TGATCTGAACAAGTTTGAGC+AGG | + | chr6.3:33162455-33162474 | MS.gene08010:intron | 40.0% | |
| TGCCACCAAACGAGAAAATT+CGG | - | chr6.3:33164767-33164786 | None:intergenic | 40.0% | |
| TGTCCGTATCTATGCTTCAT+AGG | - | chr6.3:33163848-33163867 | None:intergenic | 40.0% | |
| TTGCGGTGCTTCTTTATACT+GGG | + | chr6.3:33164501-33164520 | MS.gene08010:CDS | 40.0% | |
| TTGTGTTAGGGCAATTCTGT+GGG | + | chr6.3:33164402-33164421 | MS.gene08010:CDS | 40.0% | |
| ! | AACCGAATTTTCTCGTTTGG+TGG | + | chr6.3:33164762-33164781 | MS.gene08010:CDS | 40.0% |
| ! | ACTCCTGCTTTATTAAGCAC+TGG | - | chr6.3:33164472-33164491 | None:intergenic | 40.0% |
| ! | GGTAACCGAATTTTCTCGTT+TGG | + | chr6.3:33164759-33164778 | MS.gene08010:CDS | 40.0% |
| ! | TTCATAGGAGCCGTAGATTT+TGG | - | chr6.3:33161719-33161738 | None:intergenic | 40.0% |
| ! | TTTTGAGCCTGTACAGATTC+AGG | + | chr6.3:33164888-33164907 | MS.gene08010:CDS | 40.0% |
| !! | ATGAAAGGGTTTTTGGAGGA+TGG | + | chr6.3:33161964-33161983 | MS.gene08010:CDS | 40.0% |
| !! | GAAAGGGAAGCATGTTTTGT+TGG | + | chr6.3:33161825-33161844 | MS.gene08010:CDS | 40.0% |
| !! | TGAAAGGGTTTTTGGAGGAT+GGG | + | chr6.3:33161965-33161984 | MS.gene08010:CDS | 40.0% |
| ACAACGTCTGCACTGAGATA+TGG | + | chr6.3:33164252-33164271 | MS.gene08010:intron | 45.0% | |
| AGAAAACGATCTACCTCAGG+AGG | + | chr6.3:33164729-33164748 | MS.gene08010:CDS | 45.0% | |
| AGTGCAGCTCAGTCGATAAA+AGG | - | chr6.3:33163088-33163107 | None:intergenic | 45.0% | |
| ATCGACTGAGCTGCACTTAT+AGG | + | chr6.3:33163091-33163110 | MS.gene08010:intron | 45.0% | |
| ATGCAGAAGCCCATTTCATG+TGG | - | chr6.3:33163139-33163158 | None:intergenic | 45.0% | |
| ATTGTCGGCCATTTCTTCTC+TGG | - | chr6.3:33164814-33164833 | None:intergenic | 45.0% | |
| CAAACCGAACCAATCCGTTT+CGG | + | chr6.3:33161553-33161572 | MS.gene08010:CDS | 45.0% | |
| CATTTCACATGCAACGTCGT+CGG | - | chr6.3:33161787-33161806 | None:intergenic | 45.0% | |
| CCCTGATAGACTGACATCAA+TGG | - | chr6.3:33164076-33164095 | None:intergenic | 45.0% | |
| CGTGAAGGCTTCGATTGATA+AGG | + | chr6.3:33164864-33164883 | MS.gene08010:CDS | 45.0% | |
| CTACGTGTCAGTATCGTGTT+AGG | - | chr6.3:33162540-33162559 | None:intergenic | 45.0% | |
| CTAGAACGGAGGTGATGAAA+GGG | + | chr6.3:33161950-33161969 | MS.gene08010:CDS | 45.0% | |
| CTATGTTAGTGTCGTGTCAG+TGG | - | chr6.3:33162295-33162314 | None:intergenic | 45.0% | |
| CTTGCGGTGCTTCTTTATAC+TGG | + | chr6.3:33164500-33164519 | MS.gene08010:CDS | 45.0% | |
| GAAGTTGTTGGAGTTTGCGA+AGG | - | chr6.3:33161686-33161705 | None:intergenic | 45.0% | |
| GACGACGTTGCATGTGAAAT+GGG | + | chr6.3:33161786-33161805 | MS.gene08010:CDS | 45.0% | |
| GCAGGAGTGATTCTATCTTG+CGG | + | chr6.3:33164484-33164503 | MS.gene08010:CDS | 45.0% | |
| GTAACTGCTGTTGGGACAAA+AGG | + | chr6.3:33164580-33164599 | MS.gene08010:CDS | 45.0% | |
| GTGGATGCATCATCCTAGAA+CGG | + | chr6.3:33161936-33161955 | MS.gene08010:CDS | 45.0% | |
| TATGAAACACGGACACTCCT+CGG | - | chr6.3:33164001-33164020 | None:intergenic | 45.0% | |
| ! | AAGCGATTCGGGGCTTAAAA+CGG | + | chr6.3:33162594-33162613 | MS.gene08010:intron | 45.0% |
| ! | AGTTGGCTTAGTGTGTAGAG+TGG | + | chr6.3:33163568-33163587 | MS.gene08010:intron | 45.0% |
| ! | ATAGGAGCCGTAGATTTTGG+CGG | - | chr6.3:33161716-33161735 | None:intergenic | 45.0% |
| ! | CGCGTGGCTAATACTGTTTT+AGG | - | chr6.3:33164445-33164464 | None:intergenic | 45.0% |
| ! | GGAGGTGATGAAAGGGTTTT+TGG | + | chr6.3:33161957-33161976 | MS.gene08010:CDS | 45.0% |
| ! | TGAAGGTGTGTGAGGAATGT+GGG | + | chr6.3:33161890-33161909 | MS.gene08010:CDS | 45.0% |
| ! | TGAGATTGTGAAGGTGTGTG+AGG | + | chr6.3:33161882-33161901 | MS.gene08010:CDS | 45.0% |
| !! | AATGCCGAAACGGATTGGTT+CGG | - | chr6.3:33161560-33161579 | None:intergenic | 45.0% |
| !! | GAAAGGGTTTTTGGAGGATG+GGG | + | chr6.3:33161966-33161985 | MS.gene08010:CDS | 45.0% |
| !! | GCATGTTTTGTTGGAGAAGC+CGG | + | chr6.3:33161834-33161853 | MS.gene08010:CDS | 45.0% |
| !! | GGTGATGAAAGGGTTTTTGG+AGG | + | chr6.3:33161960-33161979 | MS.gene08010:CDS | 45.0% |
| ACAAGGACATGTCTAACCCG+AGG | + | chr6.3:33163981-33164000 | MS.gene08010:intron | 50.0% | |
| ACATGCAACGTCGTCGGTAA+CGG | - | chr6.3:33161781-33161800 | None:intergenic | 50.0% | |
| ACTGATATTGGACGCCGTGA+AGG | + | chr6.3:33164849-33164868 | MS.gene08010:CDS | 50.0% | |
| AGTGTCGTGTCAGTGGTCTA+TGG | - | chr6.3:33162288-33162307 | None:intergenic | 50.0% | |
| ATGAAACACGGACACTCCTC+GGG | - | chr6.3:33164000-33164019 | None:intergenic | 50.0% | |
| CACAACCGAGAATGCCGAAA+CGG | - | chr6.3:33161570-33161589 | None:intergenic | 50.0% | |
| CCAATCCGTTTCGGCATTCT+CGG | + | chr6.3:33161562-33161581 | MS.gene08010:CDS | 50.0% | |
| CCTAGAACGGAGGTGATGAA+AGG | + | chr6.3:33161949-33161968 | MS.gene08010:CDS | 50.0% | |
| CCTTTCATCACCTCCGTTCT+AGG | - | chr6.3:33161952-33161971 | None:intergenic | 50.0% | |
| CGACGACGTTGCATGTGAAA+TGG | + | chr6.3:33161785-33161804 | MS.gene08010:CDS | 50.0% | |
| GAACGACATTCGTGTGAAGC+CGG | + | chr6.3:33164339-33164358 | MS.gene08010:CDS | 50.0% | |
| GACAGTATCACTGTCGTCTC+AGG | - | chr6.3:33162211-33162230 | None:intergenic | 50.0% | |
| GACGTTGCATGTGAAATGGG+CGG | + | chr6.3:33161789-33161808 | MS.gene08010:CDS | 50.0% | |
| GATGCATCATCCTAGAACGG+AGG | + | chr6.3:33161939-33161958 | MS.gene08010:CDS | 50.0% | |
| GCGGAGAAAAGAGACATTGC+AGG | + | chr6.3:33163016-33163035 | MS.gene08010:intron | 50.0% | |
| GGAATGTGGGGTGCAGTTTA+TGG | + | chr6.3:33161903-33161922 | MS.gene08010:CDS | 50.0% | |
| GGTTAGACATGTCCTTGTGC+AGG | - | chr6.3:33163979-33163998 | None:intergenic | 50.0% | |
| GTGGGGTGCAGTTTATGGAT+GGG | + | chr6.3:33161908-33161927 | MS.gene08010:CDS | 50.0% | |
| GTTACCATAAGAGCCTCCTG+AGG | - | chr6.3:33164745-33164764 | None:intergenic | 50.0% | |
| GTTGTTGGAGTTTGCGAAGG+TGG | - | chr6.3:33161683-33161702 | None:intergenic | 50.0% | |
| GTTTGCGAAGGTGGTAGCTT+TGG | - | chr6.3:33161674-33161693 | None:intergenic | 50.0% | |
| TCTACCTCAGGAGGCTCTTA+TGG | + | chr6.3:33164738-33164757 | MS.gene08010:CDS | 50.0% | |
| TGAGAGTTTCCGGGCTATGT+CGG | - | chr6.3:33161593-33161612 | None:intergenic | 50.0% | |
| TGTGGGGTGCAGTTTATGGA+TGG | + | chr6.3:33161907-33161926 | MS.gene08010:CDS | 50.0% | |
| ! | CTCTAAGGGAAAGGAGACCA+AGG | - | chr6.3:33163784-33163803 | None:intergenic | 50.0% |
| ! | GAAGGTGTGTGAGGAATGTG+GGG | + | chr6.3:33161891-33161910 | MS.gene08010:CDS | 50.0% |
| ! | GTGAAGGTGTGTGAGGAATG+TGG | + | chr6.3:33161889-33161908 | MS.gene08010:CDS | 50.0% |
| !! | GAAGGTGGTAGCTTTGGAGA+AGG | - | chr6.3:33161668-33161687 | None:intergenic | 50.0% |
| !! | TGGTAGCTTTGGAGAAGGTG+CGG | - | chr6.3:33161663-33161682 | None:intergenic | 50.0% |
| !! | TGTTTTGTTGGAGAAGCCGG+TGG | + | chr6.3:33161837-33161856 | MS.gene08010:CDS | 50.0% |
| !! | TTTTCGTGTCACTGTCGTGC+AGG | - | chr6.3:33162071-33162090 | None:intergenic | 50.0% |
| AATGGCGCGTGAGAGTTTCC+GGG | - | chr6.3:33161602-33161621 | None:intergenic | 55.0% | |
| AGAAACGCCAAGCATGCAGC+AGG | - | chr6.3:33163726-33163745 | None:intergenic | 55.0% | |
| CACGACATGTGTCCTGCACA+AGG | + | chr6.3:33163964-33163983 | MS.gene08010:intron | 55.0% | |
| CACGGACAGCAAACACGACA+TGG | + | chr6.3:33163866-33163885 | MS.gene08010:intron | 55.0% | |
| CCGAGAATGCCGAAACGGAT+TGG | - | chr6.3:33161565-33161584 | None:intergenic | 55.0% | |
| CCTCCCACCGCCAAAATCTA+CGG | + | chr6.3:33161706-33161725 | MS.gene08010:CDS | 55.0% | |
| CTGAAACCCTGCTGCATGCT+TGG | + | chr6.3:33163716-33163735 | MS.gene08010:intron | 55.0% | |
| GAAACGCCAAGCATGCAGCA+GGG | - | chr6.3:33163725-33163744 | None:intergenic | 55.0% | |
| GAATGGCGCGTGAGAGTTTC+CGG | - | chr6.3:33161603-33161622 | None:intergenic | 55.0% | |
| GTTGCATGTGAAATGGGCGG+TGG | + | chr6.3:33161792-33161811 | MS.gene08010:CDS | 55.0% | |
| TATGTTGGGAACTTGGGGCG+CGG | - | chr6.3:33163049-33163068 | None:intergenic | 55.0% | |
| TGGAGGATGGGGAGAGGTTT+GGG | + | chr6.3:33161977-33161996 | MS.gene08010:CDS | 55.0% | |
| TTGGAGGATGGGGAGAGGTT+TGG | + | chr6.3:33161976-33161995 | MS.gene08010:CDS | 55.0% | |
| TTTGTTGGAGAAGCCGGTGG+CGG | + | chr6.3:33161840-33161859 | MS.gene08010:CDS | 55.0% | |
| !! | ATTAAGCACTGGTTCGCGCG+TGG | - | chr6.3:33164461-33164480 | None:intergenic | 55.0% |
| !! | CGTAGATTTTGGCGGTGGGA+GGG | - | chr6.3:33161708-33161727 | None:intergenic | 55.0% |
| !! | GAGCCGTAGATTTTGGCGGT+GGG | - | chr6.3:33161712-33161731 | None:intergenic | 55.0% |
| !! | GGTTTTTGGAGGATGGGGAG+AGG | + | chr6.3:33161971-33161990 | MS.gene08010:CDS | 55.0% |
| AAGCCGGATCTCGACGCTCT+TGG | + | chr6.3:33164355-33164374 | MS.gene08010:CDS | 60.0% | |
| GCTCTCTTGGCGACGAAGGA+TGG | + | chr6.3:33164377-33164396 | MS.gene08010:CDS | 60.0% | |
| GGATGGGGAGAGGTTTGGGA+AGG | + | chr6.3:33161981-33162000 | MS.gene08010:CDS | 60.0% | |
| GGCGGTGGAAGAGAGGAGAA+TGG | - | chr6.3:33161620-33161639 | None:intergenic | 60.0% | |
| TCCTTCACACTCACCGCCAC+CGG | - | chr6.3:33161856-33161875 | None:intergenic | 60.0% | |
| TGTGAAATGGGCGGTGGCTG+CGG | + | chr6.3:33161798-33161817 | MS.gene08010:CDS | 60.0% | |
| ! | CTCGACGCTCTTGGCTCTCT+TGG | + | chr6.3:33164364-33164383 | MS.gene08010:CDS | 60.0% |
| ! | CTTGGCTCTCTTGGCGACGA+AGG | + | chr6.3:33164373-33164392 | MS.gene08010:CDS | 60.0% |
| ! | TCGGTTGTGCCGACATAGCC+CGG | + | chr6.3:33161581-33161600 | MS.gene08010:CDS | 60.0% |
| !! | AGATGGTGGCGGTGGAAGAG+AGG | - | chr6.3:33161627-33161646 | None:intergenic | 60.0% |
| !! | CCGTAGATTTTGGCGGTGGG+AGG | - | chr6.3:33161709-33161728 | None:intergenic | 60.0% |
| !! | GAGCCAAGAGCGTCGAGATC+CGG | - | chr6.3:33164361-33164380 | None:intergenic | 60.0% |
| !! | GGAGCCGTAGATTTTGGCGG+TGG | - | chr6.3:33161713-33161732 | None:intergenic | 60.0% |
| CGGTGGCTGCGGCGAAGAAA+GGG | + | chr6.3:33161809-33161828 | MS.gene08010:CDS | 65.0% | |
| GGCGGTGGGAGGGAAGTTGT+TGG | - | chr6.3:33161698-33161717 | None:intergenic | 65.0% | |
| ACCGCCACCATCTCCGCCGT+CGG | + | chr6.3:33161634-33161653 | MS.gene08010:CDS | 70.0% | |
| GCGGTGGCTGCGGCGAAGAA+AGG | + | chr6.3:33161808-33161827 | MS.gene08010:CDS | 70.0% | |
| ! | GCCGGTGGCGGTGAGTGTGA+AGG | + | chr6.3:33161852-33161871 | MS.gene08010:CDS | 70.0% |
| ! | GGAGAAGGTGCGGCTGCCGA+CGG | - | chr6.3:33161653-33161672 | None:intergenic | 70.0% |
| GCTGCCGACGGCGGAGATGG+TGG | - | chr6.3:33161641-33161660 | None:intergenic | 75.0% | |
| ! | GAAGGTGCGGCTGCCGACGG+CGG | - | chr6.3:33161650-33161669 | None:intergenic | 75.0% |
| ! | GCCGACGGCGGAGATGGTGG+CGG | - | chr6.3:33161638-33161657 | None:intergenic | 75.0% |
| !! | GACGGCGGAGATGGTGGCGG+TGG | - | chr6.3:33161635-33161654 | None:intergenic | 75.0% |
| ! | GCGGCTGCCGACGGCGGAGA+TGG | - | chr6.3:33161644-33161663 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 33161547 | 33164915 | 33161547 | ID=MS.gene08010 |
| chr6.3 | mRNA | 33161547 | 33164915 | 33161547 | ID=MS.gene08010.t1;Parent=MS.gene08010 |
| chr6.3 | exon | 33161547 | 33162011 | 33161547 | ID=MS.gene08010.t1.exon1;Parent=MS.gene08010.t1 |
| chr6.3 | CDS | 33161547 | 33162011 | 33161547 | ID=cds.MS.gene08010.t1;Parent=MS.gene08010.t1 |
| chr6.3 | exon | 33164295 | 33164915 | 33164295 | ID=MS.gene08010.t1.exon2;Parent=MS.gene08010.t1 |
| chr6.3 | CDS | 33164295 | 33164915 | 33164295 | ID=cds.MS.gene08010.t1;Parent=MS.gene08010.t1 |
| Gene Sequence |
| Protein sequence |
