Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08811.t1 | XP_003629600.2 | 95.2 | 434 | 21 | 0 | 1 | 434 | 1 | 434 | 7.30E-246 | 859.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08811.t1 | Q9LIS1 | 42.7 | 429 | 225 | 10 | 5 | 429 | 5 | 416 | 1.4e-91 | 338.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08811.t1 | A0A396GN49 | 95.2 | 434 | 21 | 0 | 1 | 434 | 1 | 434 | 5.3e-246 | 859.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050581 | MS.gene08811 | 0.801571 | 8.46E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene08811 | 0.805213 | 1.49E-49 | -1.69E-46 |
| MS.gene054013 | MS.gene08811 | 0.802275 | 6.06E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene08811 | 0.803533 | 3.33E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene08811 | 0.822219 | 2.66E-53 | -1.69E-46 |
| MS.gene060005 | MS.gene08811 | 0.815602 | 8.50E-52 | -1.69E-46 |
| MS.gene060799 | MS.gene08811 | 0.825319 | 5.00E-54 | -1.69E-46 |
| MS.gene060800 | MS.gene08811 | 0.853646 | 2.08E-61 | -1.69E-46 |
| MS.gene060801 | MS.gene08811 | 0.848401 | 6.28E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08811 | MS.gene060401 | PPI |
| MS.gene013088 | MS.gene08811 | PPI |
| MS.gene08811 | MS.gene020442 | PPI |
| MS.gene08811 | MS.gene73339 | PPI |
| MS.gene08811 | MS.gene37919 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08811.t1 | MTR_8g081600 | 94.465 | 271 | 15 | 0 | 164 | 434 | 1 | 271 | 0.0 | 528 |
| MS.gene08811.t1 | MTR_8g081480 | 95.890 | 146 | 6 | 0 | 1 | 146 | 1 | 146 | 1.02e-100 | 296 |
| MS.gene08811.t1 | MTR_2g036780 | 41.667 | 420 | 226 | 8 | 16 | 423 | 16 | 428 | 7.14e-100 | 305 |
| MS.gene08811.t1 | MTR_3g100150 | 38.425 | 419 | 244 | 8 | 16 | 424 | 15 | 429 | 1.45e-94 | 293 |
| MS.gene08811.t1 | MTR_1g035890 | 37.123 | 431 | 250 | 9 | 16 | 431 | 15 | 439 | 8.60e-90 | 279 |
| MS.gene08811.t1 | MTR_1g011660 | 25.124 | 402 | 282 | 9 | 37 | 419 | 30 | 431 | 2.01e-28 | 116 |
| MS.gene08811.t1 | MTR_7g114960 | 24.524 | 420 | 275 | 12 | 32 | 419 | 28 | 437 | 6.61e-28 | 115 |
| MS.gene08811.t1 | MTR_4g007540 | 30.964 | 197 | 116 | 3 | 1 | 196 | 10 | 187 | 2.06e-17 | 84.3 |
| MS.gene08811.t1 | MTR_2g064495 | 24.946 | 461 | 266 | 22 | 1 | 423 | 10 | 428 | 1.05e-16 | 82.0 |
| MS.gene08811.t1 | MTR_2g105330 | 31.633 | 196 | 113 | 7 | 8 | 196 | 6 | 187 | 3.07e-16 | 80.9 |
| MS.gene08811.t1 | MTR_7g027175 | 30.726 | 179 | 121 | 2 | 20 | 196 | 24 | 201 | 3.43e-15 | 77.4 |
| MS.gene08811.t1 | MTR_8g096530 | 31.169 | 154 | 103 | 2 | 46 | 196 | 39 | 192 | 8.48e-15 | 76.3 |
| MS.gene08811.t1 | MTR_3g026950 | 25.954 | 262 | 169 | 7 | 37 | 278 | 26 | 282 | 4.07e-14 | 74.3 |
| MS.gene08811.t1 | MTR_7g114560 | 30.075 | 133 | 91 | 1 | 49 | 179 | 49 | 181 | 3.71e-13 | 71.2 |
| MS.gene08811.t1 | MTR_8g075610 | 24.000 | 250 | 178 | 5 | 43 | 284 | 25 | 270 | 1.03e-12 | 69.7 |
| MS.gene08811.t1 | MTR_4g097090 | 24.932 | 369 | 223 | 16 | 43 | 382 | 39 | 382 | 4.21e-12 | 68.2 |
| MS.gene08811.t1 | MTR_3g098980 | 30.519 | 154 | 104 | 2 | 46 | 196 | 46 | 199 | 5.22e-12 | 67.8 |
| MS.gene08811.t1 | MTR_3g049150 | 22.093 | 430 | 294 | 15 | 37 | 431 | 26 | 449 | 6.80e-12 | 67.4 |
| MS.gene08811.t1 | MTR_7g084940 | 26.250 | 240 | 160 | 10 | 45 | 271 | 47 | 282 | 7.75e-12 | 67.4 |
| MS.gene08811.t1 | MTR_7g114520 | 28.358 | 134 | 93 | 2 | 49 | 179 | 50 | 183 | 3.27e-11 | 65.5 |
| MS.gene08811.t1 | MTR_7g114470 | 32.374 | 139 | 88 | 4 | 46 | 179 | 45 | 182 | 4.12e-11 | 65.1 |
| MS.gene08811.t1 | MTR_5g076700 | 30.827 | 133 | 90 | 1 | 49 | 179 | 49 | 181 | 7.90e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08811.t1 | AT3G23840 | 42.494 | 433 | 228 | 10 | 1 | 429 | 1 | 416 | 7.60e-107 | 322 |
| MS.gene08811.t1 | AT4G13840 | 39.019 | 428 | 250 | 6 | 5 | 429 | 7 | 426 | 3.70e-105 | 318 |
| MS.gene08811.t1 | AT4G24510 | 34.499 | 429 | 250 | 11 | 10 | 423 | 4 | 416 | 2.87e-84 | 265 |
| MS.gene08811.t1 | AT2G19070 | 26.392 | 413 | 250 | 18 | 38 | 407 | 29 | 430 | 1.67e-18 | 87.8 |
| MS.gene08811.t1 | AT4G29250 | 24.550 | 444 | 261 | 18 | 19 | 419 | 27 | 439 | 1.98e-17 | 84.7 |
| MS.gene08811.t1 | AT5G48930 | 24.291 | 247 | 178 | 4 | 35 | 274 | 25 | 269 | 2.97e-14 | 74.7 |
| MS.gene08811.t1 | AT5G41040 | 33.962 | 159 | 99 | 3 | 46 | 201 | 65 | 220 | 3.60e-14 | 74.7 |
| MS.gene08811.t1 | AT5G41040 | 33.962 | 159 | 99 | 3 | 46 | 201 | 49 | 204 | 3.76e-14 | 74.3 |
| MS.gene08811.t1 | AT5G57840 | 22.384 | 411 | 290 | 10 | 35 | 420 | 25 | 431 | 1.11e-13 | 73.2 |
| MS.gene08811.t1 | AT5G63560 | 30.636 | 173 | 104 | 5 | 43 | 199 | 27 | 199 | 1.54e-13 | 72.4 |
| MS.gene08811.t1 | AT3G48720 | 30.323 | 155 | 104 | 3 | 46 | 196 | 41 | 195 | 2.78e-13 | 71.6 |
| MS.gene08811.t1 | AT1G65450 | 27.049 | 244 | 167 | 6 | 46 | 278 | 51 | 294 | 4.57e-12 | 68.2 |
Find 129 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACTTGCAAGAACAAATT+TGG | 0.140491 | 4.2:-13091717 | MS.gene08811:CDS |
| TGACACTAGTTTGAAAATTT+TGG | 0.151455 | 4.2:-13091497 | MS.gene08811:CDS |
| GTCTCAACACCCCTTAATTT+TGG | 0.157335 | 4.2:-13091856 | MS.gene08811:CDS |
| CCTTAGCTGGGCCCATGTTA+TGG | 0.166786 | 4.2:-13091971 | MS.gene08811:CDS |
| AAACTTTATGTGCAATAATT+TGG | 0.180735 | 4.2:-13091663 | MS.gene08811:CDS |
| CTTAGCTGGGCCCATGTTAT+GGG | 0.193486 | 4.2:-13091970 | MS.gene08811:CDS |
| CTTCAGATTTCATCAACTTA+TGG | 0.205690 | 4.2:-13091933 | MS.gene08811:CDS |
| GGATTTCATTGGGCCTTAGC+TGG | 0.223582 | 4.2:-13091984 | MS.gene08811:CDS |
| GTTCTTGCAAGTTGTTCATT+AGG | 0.260077 | 4.2:+13091725 | None:intergenic |
| TTCAGATTTCATCAACTTAT+GGG | 0.298539 | 4.2:-13091932 | MS.gene08811:CDS |
| TGGTAGGGGCAATGATATAA+TGG | 0.301115 | 4.2:-13091572 | MS.gene08811:CDS |
| TCATCCCTTGCGGCCGATTC+CGG | 0.304819 | 4.2:-13097389 | MS.gene08811:CDS |
| TGATGAAAGAAATCAAATTA+TGG | 0.305939 | 4.2:-13091449 | MS.gene08811:CDS |
| TTCTTGCAAGTTGTTCATTA+GGG | 0.331603 | 4.2:+13091726 | None:intergenic |
| AAGCCATTCATCTAGAGTTT+TGG | 0.331771 | 4.2:+13097296 | None:intergenic |
| CTCGTTTCTCAACAAGTCAT+TGG | 0.333685 | 4.2:-13097243 | MS.gene08811:CDS |
| TGTGTATGACTTAAAATTAA+AGG | 0.335448 | 4.2:-13091344 | MS.gene08811:CDS |
| TTTAAGATAGTGAAGTTTCA+TGG | 0.343891 | 4.2:+13097500 | None:intergenic |
| GGGAGATGAAGGTGTTGTTT+TGG | 0.345479 | 4.2:-13091281 | MS.gene08811:CDS |
| TTCATCTTCTGGCAATATAA+TGG | 0.352304 | 4.2:+13091219 | None:intergenic |
| TTGACCCGGTTGGTGATCAT+TGG | 0.353117 | 4.2:-13091801 | MS.gene08811:CDS |
| CAACTTGCAAGAACAAATTT+GGG | 0.358829 | 4.2:-13091716 | MS.gene08811:CDS |
| TTAAAGAACCTGCAACAAAA+TGG | 0.359088 | 4.2:+13097197 | None:intergenic |
| CGATTCCGGCGATCGGAATC+TGG | 0.360082 | 4.2:-13097375 | MS.gene08811:CDS |
| GAAGGAGAAAATGATAATTC+TGG | 0.360908 | 4.2:+13097219 | None:intergenic |
| TTGAGAAACGAGCAACTTGT+AGG | 0.365130 | 4.2:+13097254 | None:intergenic |
| AACTGTCACGGTTGTGGGTT+CGG | 0.365252 | 4.2:+13091612 | None:intergenic |
| GTTGGGCCAGGTCATGCCAC+TGG | 0.366990 | 4.2:-13097561 | MS.gene08811:CDS |
| AAGTGTGGTGGGATTTCATT+GGG | 0.369203 | 4.2:-13091994 | MS.gene08811:CDS |
| AGGAACCAGCTACATTTAAA+CGG | 0.370152 | 4.2:-13091825 | MS.gene08811:CDS |
| TAAGTCAAGAAATGTCAAAT+TGG | 0.372854 | 4.2:+13091378 | None:intergenic |
| AGGGGTGTTGAGACGGATCT+TGG | 0.389004 | 4.2:+13091865 | None:intergenic |
| TTTGGTGCAATTGGCCTCAA+TGG | 0.403810 | 4.2:+13097314 | None:intergenic |
| TTTGTTTACTACACACTTCA+AGG | 0.403996 | 4.2:-13091307 | MS.gene08811:CDS |
| AGTGTGTAGTAAACAAATCT+TGG | 0.405045 | 4.2:+13091313 | None:intergenic |
| ATATCATTGCCCCTACCATT+GGG | 0.408070 | 4.2:+13091577 | None:intergenic |
| AAGCTCTCTTTCTCTTCTTG+TGG | 0.410113 | 4.2:+13097609 | None:intergenic |
| AGATGAATGGCTTGCTATGA+TGG | 0.415307 | 4.2:-13097286 | MS.gene08811:CDS |
| GTGTATGACTTAAAATTAAA+GGG | 0.419239 | 4.2:-13091343 | MS.gene08811:CDS |
| GTTCGGATCCTTCTCGAACT+CGG | 0.421086 | 4.2:+13091629 | None:intergenic |
| TCGACAAACTGTCACGGTTG+TGG | 0.425168 | 4.2:+13091606 | None:intergenic |
| GATTTCATTGGGCCTTAGCT+GGG | 0.427691 | 4.2:-13091983 | MS.gene08811:CDS |
| CAGATTCCGATCGCCGGAAT+CGG | 0.429202 | 4.2:+13097376 | None:intergenic |
| TATATCATTGCCCCTACCAT+TGG | 0.435218 | 4.2:+13091576 | None:intergenic |
| GGTAGGGGCAATGATATAAT+GGG | 0.436937 | 4.2:-13091571 | MS.gene08811:CDS |
| TATATTGCCAGAAGATGAAA+TGG | 0.440744 | 4.2:-13091215 | MS.gene08811:CDS |
| ATTGCACATAAAGTTTCAAA+TGG | 0.442525 | 4.2:+13091670 | None:intergenic |
| CACATAAAGTTTCAAATGGA+GGG | 0.442722 | 4.2:+13091674 | None:intergenic |
| AGCTCTCTTTCTCTTCTTGT+GGG | 0.443480 | 4.2:+13097610 | None:intergenic |
| CGACAAACTGTCACGGTTGT+GGG | 0.445047 | 4.2:+13091607 | None:intergenic |
| TCGTTTCTCAACAAGTCATT+GGG | 0.447263 | 4.2:-13097242 | MS.gene08811:CDS |
| GGAACCAGCTACATTTAAAC+GGG | 0.448779 | 4.2:-13091824 | MS.gene08811:CDS |
| CCTAAGGTGAATGATATTGA+TGG | 0.452041 | 4.2:-13091253 | MS.gene08811:CDS |
| TTCGGATCCTTCTCGAACTC+GGG | 0.459230 | 4.2:+13091630 | None:intergenic |
| CCTCAACCTTGCATATCAAT+TGG | 0.459576 | 4.2:+13091542 | None:intergenic |
| TAAGTGTGGTGGGATTTCAT+TGG | 0.465833 | 4.2:-13091995 | MS.gene08811:CDS |
| GCTAGCATGCTTGTGGATCA+AGG | 0.466138 | 4.2:-13091475 | MS.gene08811:CDS |
| TTAGCTGGGCCCATGTTATG+GGG | 0.467497 | 4.2:-13091969 | MS.gene08811:CDS |
| AAATCCGAGCTTAATGTGTA+TGG | 0.468103 | 4.2:-13091184 | MS.gene08811:CDS |
| ATGGCCAGGTCCAAGCCGTT+CGG | 0.469048 | 4.2:+13097519 | None:intergenic |
| CTTCAAGGGGTGGGAGATGA+AGG | 0.469388 | 4.2:-13091292 | MS.gene08811:CDS |
| CCATCAATATCATTCACCTT+AGG | 0.474137 | 4.2:+13091253 | None:intergenic |
| GGGATCCAATGATCACCAAC+CGG | 0.475921 | 4.2:+13091796 | None:intergenic |
| GATAGTGAAGTTTCATGGCC+AGG | 0.479627 | 4.2:+13097505 | None:intergenic |
| GAAACTTCACTATCTTAAAG+TGG | 0.479693 | 4.2:-13097496 | MS.gene08811:CDS |
| GACGGATCTTGGAATGTTGA+AGG | 0.485139 | 4.2:+13091876 | None:intergenic |
| AACAATTAAGAAAATAAAAG+AGG | 0.487357 | 4.2:-13097439 | MS.gene08811:CDS |
| ATTTGAGAGTATCTTCAGTT+GGG | 0.488025 | 4.2:-13097578 | MS.gene08811:CDS |
| GGAGGGGTTTGTTCAACACT+TGG | 0.494342 | 4.2:+13091691 | None:intergenic |
| TACATTTAAACGGGTTGACC+CGG | 0.497184 | 4.2:-13091815 | MS.gene08811:CDS |
| CCATAACATGGGCCCAGCTA+AGG | 0.499246 | 4.2:+13091971 | None:intergenic |
| TCAACCCGTTTAAATGTAGC+TGG | 0.502437 | 4.2:+13091820 | None:intergenic |
| AATGGCTTGCTATGATGGAT+TGG | 0.507896 | 4.2:-13097281 | MS.gene08811:CDS |
| TTGCGGCCGATTCCGGCGAT+CGG | 0.508580 | 4.2:-13097382 | MS.gene08811:CDS |
| GCACCAAAACTCTAGATGAA+TGG | 0.514485 | 4.2:-13097299 | MS.gene08811:CDS |
| TTGATATGCAAGGTTGAGGC+AGG | 0.515574 | 4.2:-13091538 | MS.gene08811:CDS |
| AGAGTATCTTCAGTTGGGCC+AGG | 0.515864 | 4.2:-13097573 | MS.gene08811:CDS |
| TCGACCCGACCCCAATGGTA+GGG | 0.517340 | 4.2:-13091587 | MS.gene08811:CDS |
| ATTGCCCCTACCATTGGGGT+CGG | 0.519926 | 4.2:+13091582 | None:intergenic |
| TCCGACCCAGTGGCATGACC+TGG | 0.523816 | 4.2:+13097555 | None:intergenic |
| TTGCCCCTACCATTGGGGTC+GGG | 0.524581 | 4.2:+13091583 | None:intergenic |
| CAATCCGAACGGCTTGGACC+TGG | 0.524702 | 4.2:-13097523 | MS.gene08811:CDS |
| GCACATAAAGTTTCAAATGG+AGG | 0.536084 | 4.2:+13091673 | None:intergenic |
| GTCGACCAGATTCCGATCGC+CGG | 0.538465 | 4.2:+13097370 | None:intergenic |
| TACTACACACTTCAAGGGGT+GGG | 0.539191 | 4.2:-13091301 | MS.gene08811:CDS |
| GATCGCCGGAATCGGCCGCA+AGG | 0.546043 | 4.2:+13097384 | None:intergenic |
| TTGTTTACTACACACTTCAA+GGG | 0.547045 | 4.2:-13091306 | MS.gene08811:CDS |
| TAACTCAATTTAAGTGTGGT+GGG | 0.547840 | 4.2:-13092005 | MS.gene08811:CDS |
| TTGGGCCAGGTCATGCCACT+GGG | 0.547919 | 4.2:-13097560 | MS.gene08811:CDS |
| GTGTATGGTATCATGTTTGA+GGG | 0.549776 | 4.2:-13091169 | MS.gene08811:CDS |
| ATCGCCGGAATCGGCCGCAA+GGG | 0.554171 | 4.2:+13097385 | None:intergenic |
| CGACCCGACCCCAATGGTAG+GGG | 0.554339 | 4.2:-13091586 | MS.gene08811:CDS |
| GATTTGAGAGTATCTTCAGT+TGG | 0.555245 | 4.2:-13097579 | MS.gene08811:CDS |
| ACATAAAGTTTCAAATGGAG+GGG | 0.558070 | 4.2:+13091675 | None:intergenic |
| GCCAGGTCATGCCACTGGGT+CGG | 0.558921 | 4.2:-13097556 | MS.gene08811:CDS |
| GTAACTCAATTTAAGTGTGG+TGG | 0.561280 | 4.2:-13092006 | MS.gene08811:CDS |
| TGTGTATGGTATCATGTTTG+AGG | 0.561998 | 4.2:-13091170 | MS.gene08811:CDS |
| AAAATTAAGGGGTGTTGAGA+CGG | 0.562724 | 4.2:+13091858 | None:intergenic |
| TTTGACTCTGAGGCCGCACA+AGG | 0.563433 | 4.2:-13097465 | MS.gene08811:CDS |
| GATTATTATTTCATCCCTTG+CGG | 0.564108 | 4.2:-13097399 | MS.gene08811:CDS |
| CTTAATTGTTAGGCCTTGTG+CGG | 0.564584 | 4.2:+13097452 | None:intergenic |
| TAGCTGGGCCCATGTTATGG+GGG | 0.565629 | 4.2:-13091968 | MS.gene08811:CDS |
| GTCGACCCGACCCCAATGGT+AGG | 0.572588 | 4.2:-13091588 | MS.gene08811:CDS |
| CCAATTGATATGCAAGGTTG+AGG | 0.574004 | 4.2:-13091542 | MS.gene08811:CDS |
| TCAGATTTCATCAACTTATG+GGG | 0.579204 | 4.2:-13091931 | MS.gene08811:CDS |
| CAGGTAACTCAATTTAAGTG+TGG | 0.580586 | 4.2:-13092009 | MS.gene08811:CDS |
| TCATTAGGGAGCTAGTTATG+TGG | 0.584575 | 4.2:+13091740 | None:intergenic |
| ATGAAATCTGAAGCTGAATG+TGG | 0.593595 | 4.2:+13091943 | None:intergenic |
| TTTAAACGGGTTGACCCGGT+TGG | 0.594712 | 4.2:-13091811 | MS.gene08811:CDS |
| AGAACCTGCAACAAAATGGA+AGG | 0.600774 | 4.2:+13097201 | None:intergenic |
| GGATCCAATGATCACCAACC+GGG | 0.601111 | 4.2:+13091797 | None:intergenic |
| TTCGTCAAGTGCAATGATTG+TGG | 0.601190 | 4.2:-13097345 | MS.gene08811:CDS |
| CAATCATTGCACTTGACGAA+GGG | 0.602139 | 4.2:+13097348 | None:intergenic |
| TTACTACACACTTCAAGGGG+TGG | 0.606615 | 4.2:-13091302 | MS.gene08811:CDS |
| GGTTTACTTCTTTGACTCTG+AGG | 0.609658 | 4.2:-13097475 | MS.gene08811:CDS |
| ACGGATCTTGGAATGTTGAA+GGG | 0.614481 | 4.2:+13091877 | None:intergenic |
| ACAATCATTGCACTTGACGA+AGG | 0.615639 | 4.2:+13097347 | None:intergenic |
| TGTTTACTACACACTTCAAG+GGG | 0.616578 | 4.2:-13091305 | MS.gene08811:CDS |
| TAGGGAGCTAGTTATGTGGA+AGG | 0.620633 | 4.2:+13091744 | None:intergenic |
| GTTTGTCGACCCGACCCCAA+TGG | 0.621503 | 4.2:-13091592 | MS.gene08811:CDS |
| TGCATAGCCCGAGTTCGAGA+AGG | 0.625715 | 4.2:-13091637 | MS.gene08811:CDS |
| TATCATTGCCCCTACCATTG+GGG | 0.626014 | 4.2:+13091578 | None:intergenic |
| GATACCATACACATTAAGCT+CGG | 0.633143 | 4.2:+13091180 | None:intergenic |
| GAAACGAGCAACTTGTAGGA+AGG | 0.635824 | 4.2:+13097258 | None:intergenic |
| GTCGGGTCGACAAACTGTCA+CGG | 0.641477 | 4.2:+13091600 | None:intergenic |
| AAATGACCAATTGATATGCA+AGG | 0.646231 | 4.2:-13091548 | MS.gene08811:CDS |
| TTGTGGAGCAAGAACCATTG+AGG | 0.669130 | 4.2:-13097328 | MS.gene08811:CDS |
| AACTTGCAAGAACAAATTTG+GGG | 0.669322 | 4.2:-13091715 | MS.gene08811:CDS |
| TGAAATCTGAAGCTGAATGT+GGG | 0.702970 | 4.2:+13091944 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAATAATATTTTTTTTA+AGG | + | chr4.2:13095221-13095240 | None:intergenic | 0.0% |
| !! | AAAATATTAAACATATTTAG+AGG | - | chr4.2:13095701-13095720 | MS.gene08811:intron | 10.0% |
| !! | AAAATGAAGAAAATAAAAAA+TGG | - | chr4.2:13095113-13095132 | MS.gene08811:intron | 10.0% |
| !! | AAATATTAAACATATTTAGA+GGG | - | chr4.2:13095702-13095721 | MS.gene08811:intron | 10.0% |
| !! | ATAAAAAGTAAATCATTTAT+TGG | - | chr4.2:13093072-13093091 | MS.gene08811:intron | 10.0% |
| !! | TAATAAAAACTTACTATTAA+AGG | + | chr4.2:13094841-13094860 | None:intergenic | 10.0% |
| !! | TATTAATTATTAGAGTTTAA+TGG | - | chr4.2:13091804-13091823 | MS.gene08811:CDS | 10.0% |
| !!! | AAATATTTTTTACAAATTCA+GGG | - | chr4.2:13092765-13092784 | MS.gene08811:intron | 10.0% |
| !!! | AATACATTGATTTTTTTTTT+TGG | + | chr4.2:13093303-13093322 | None:intergenic | 10.0% |
| !!! | AATCTATATTTTTTATTGAT+AGG | - | chr4.2:13092821-13092840 | MS.gene08811:intron | 10.0% |
| !!! | AATTAAATTTTTAATTTGGA+AGG | - | chr4.2:13092602-13092621 | MS.gene08811:intron | 10.0% |
| !!! | ACTTTTTAAAAGTTAAAAAA+TGG | - | chr4.2:13094691-13094710 | MS.gene08811:intron | 10.0% |
| !!! | ATTTGATATGAAATTTTTTT+AGG | + | chr4.2:13093721-13093740 | None:intergenic | 10.0% |
| !!! | CTCAAATTAAATTTTTAATT+TGG | - | chr4.2:13092598-13092617 | MS.gene08811:intron | 10.0% |
| !!! | TAAATATTTTTTACAAATTC+AGG | - | chr4.2:13092764-13092783 | MS.gene08811:intron | 10.0% |
| !!! | TATTAAACTTTTTTTTTTGA+AGG | - | chr4.2:13095678-13095697 | MS.gene08811:intron | 10.0% |
| !!! | TATTTATATTTTCAAAATGT+TGG | - | chr4.2:13095082-13095101 | MS.gene08811:intron | 10.0% |
| !!! | TTAAATGTTTTAATTTTTTC+AGG | - | chr4.2:13095364-13095383 | MS.gene08811:intron | 10.0% |
| !!! | TTTTTACTTAAATTTTGTTA+AGG | + | chr4.2:13096095-13096114 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTTATTTTACAG+AGG | + | chr4.2:13092639-13092658 | None:intergenic | 10.0% |
| !! | AAAAATAATAAATGTTGCAT+TGG | - | chr4.2:13094493-13094512 | MS.gene08811:intron | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr4.2:13094153-13094172 | MS.gene08811:intron | 15.0% |
| !! | AACAATTAAGAAAATAAAAG+AGG | - | chr4.2:13091338-13091357 | MS.gene08811:CDS | 15.0% |
| !! | AACACTTTAATTAATATGAA+TGG | - | chr4.2:13093870-13093889 | MS.gene08811:intron | 15.0% |
| !! | ACTAAAAATATTTATTGATG+TGG | - | chr4.2:13091894-13091913 | MS.gene08811:CDS | 15.0% |
| !! | AGAATTCTTAAAAATTGTTT+CGG | - | chr4.2:13093367-13093386 | MS.gene08811:intron | 15.0% |
| !! | TTAATAAAACTTACTATTAC+AGG | - | chr4.2:13094987-13095006 | MS.gene08811:intron | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | - | chr4.2:13094467-13094486 | MS.gene08811:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAA+TGG | - | chr4.2:13094534-13094553 | MS.gene08811:intron | 15.0% |
| !!! | CAATATTTTAGCTTAAAATA+TGG | - | chr4.2:13092151-13092170 | MS.gene08811:intron | 15.0% |
| !!! | CATATTTTAAGCTAAAATAT+TGG | + | chr4.2:13092153-13092172 | None:intergenic | 15.0% |
| !!! | CTTTTATTTTCTTAATTGTT+AGG | + | chr4.2:13091338-13091357 | None:intergenic | 15.0% |
| !!! | GTAATTTTAAATGTTTTGAT+TGG | - | chr4.2:13091916-13091935 | MS.gene08811:CDS | 15.0% |
| !!! | GTTGAATTGAATTTTAAATT+AGG | + | chr4.2:13093492-13093511 | None:intergenic | 15.0% |
| !!! | TTTGATTAGTTTTTATAGAA+GGG | - | chr4.2:13096463-13096482 | MS.gene08811:intron | 15.0% |
| !!! | TTTGTTATAATTGAATTAGA+TGG | - | chr4.2:13095916-13095935 | MS.gene08811:intron | 15.0% |
| !!! | TTTTGATTAGTTTTTATAGA+AGG | - | chr4.2:13096462-13096481 | MS.gene08811:intron | 15.0% |
| !! | AAAATTCCATAACTACAATT+AGG | + | chr4.2:13093659-13093678 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr4.2:13094163-13094182 | None:intergenic | 20.0% |
| !! | AAACTTTATGTGCAATAATT+TGG | - | chr4.2:13097114-13097133 | MS.gene08811:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr4.2:13094120-13094139 | MS.gene08811:intron | 20.0% |
| !! | AATTTAAACCTTGATAAATG+TGG | + | chr4.2:13095172-13095191 | None:intergenic | 20.0% |
| !! | AGTGATTAATCTCTAAATTT+AGG | + | chr4.2:13094921-13094940 | None:intergenic | 20.0% |
| !! | ATACAAAAACTGTATTGTAT+TGG | - | chr4.2:13096569-13096588 | MS.gene08811:intron | 20.0% |
| !! | ATATAGTAGAAAAAGATCAA+GGG | - | chr4.2:13097351-13097370 | MS.gene08811:CDS | 20.0% |
| !! | ATTTAAACCTTGATAAATGT+GGG | + | chr4.2:13095171-13095190 | None:intergenic | 20.0% |
| !! | CTGAAAATAGTTTATGTAAA+TGG | + | chr4.2:13092704-13092723 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | - | chr4.2:13094456-13094475 | MS.gene08811:intron | 20.0% |
| !! | GTGTATGACTTAAAATTAAA+GGG | - | chr4.2:13097434-13097453 | MS.gene08811:CDS | 20.0% |
| !! | TGATGAAAGAAATCAAATTA+TGG | - | chr4.2:13097328-13097347 | MS.gene08811:CDS | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | - | chr4.2:13094455-13094474 | MS.gene08811:intron | 20.0% |
| !! | TGTGTATGACTTAAAATTAA+AGG | - | chr4.2:13097433-13097452 | MS.gene08811:CDS | 20.0% |
| !!! | ACATTTTCCTTTAGTTTAAA+AGG | + | chr4.2:13094787-13094806 | None:intergenic | 20.0% |
| !!! | ATTAATTGTGTTGATTTTGA+TGG | - | chr4.2:13094372-13094391 | MS.gene08811:intron | 20.0% |
| !!! | ATTTGAAAATCTGATAGTTT+TGG | + | chr4.2:13092182-13092201 | None:intergenic | 20.0% |
| !!! | ATTTTAGCTTAAAATATGGA+GGG | - | chr4.2:13092155-13092174 | MS.gene08811:intron | 20.0% |
| !!! | CAAAATTTAGAGTTTAAAAG+TGG | - | chr4.2:13093552-13093571 | MS.gene08811:intron | 20.0% |
| !!! | CACTTTTAAACTCTAAATTT+TGG | + | chr4.2:13093554-13093573 | None:intergenic | 20.0% |
| !!! | CATTTTCCTTTAGTTTAAAA+GGG | + | chr4.2:13094786-13094805 | None:intergenic | 20.0% |
| !!! | GCATCTCAATTTTTTTTAAA+AGG | + | chr4.2:13095275-13095294 | None:intergenic | 20.0% |
| !!! | TACTTAAATTTTGTTAAGGA+GGG | + | chr4.2:13096091-13096110 | None:intergenic | 20.0% |
| !!! | TATTTTAGCTTAAAATATGG+AGG | - | chr4.2:13092154-13092173 | MS.gene08811:intron | 20.0% |
| !!! | TTACTTAAATTTTGTTAAGG+AGG | + | chr4.2:13096092-13096111 | None:intergenic | 20.0% |
| !!! | TTGAGTACTTATATTCTTTT+AGG | - | chr4.2:13096602-13096621 | MS.gene08811:intron | 20.0% |
| !!! | TTGTAGTTATGGAATTTTAT+TGG | - | chr4.2:13093661-13093680 | MS.gene08811:intron | 20.0% |
| !!! | TTTTAACCAAAATTCACTTT+TGG | + | chr4.2:13092012-13092031 | None:intergenic | 20.0% |
| !!! | TTTTTTTGGTTACATTAAAG+AGG | + | chr4.2:13093289-13093308 | None:intergenic | 20.0% |
| ! | AAAAATGTGGTATTGTGAAA+TGG | - | chr4.2:13094650-13094669 | MS.gene08811:intron | 25.0% |
| ! | AAAATGTTAACGAGTATCTT+TGG | - | chr4.2:13094800-13094819 | MS.gene08811:intron | 25.0% |
| ! | AAATGTTAACAAGTTCTTTC+TGG | + | chr4.2:13095027-13095046 | None:intergenic | 25.0% |
| ! | AAATGTTAACGAGTATCTTT+GGG | - | chr4.2:13094801-13094820 | MS.gene08811:intron | 25.0% |
| ! | AACTAGGAACAAAATATTGT+CGG | - | chr4.2:13095489-13095508 | MS.gene08811:intron | 25.0% |
| ! | AAGAGACAATTATTATGAGA+CGG | - | chr4.2:13094559-13094578 | MS.gene08811:intron | 25.0% |
| ! | AATAGTCTCACCAAATTAAA+TGG | - | chr4.2:13093962-13093981 | MS.gene08811:intron | 25.0% |
| ! | AATCAACAAAATGGTAACAT+TGG | - | chr4.2:13092212-13092231 | MS.gene08811:intron | 25.0% |
| ! | AATGTTAACAAGTTCTTTCT+GGG | + | chr4.2:13095026-13095045 | None:intergenic | 25.0% |
| ! | AATTAACTTCATCGTCTTTA+AGG | - | chr4.2:13092308-13092327 | MS.gene08811:intron | 25.0% |
| ! | ACTTATGAATATTCAATGCA+TGG | + | chr4.2:13096737-13096756 | None:intergenic | 25.0% |
| ! | AGAAATTTAAAGAATCTCAG+TGG | + | chr4.2:13095609-13095628 | None:intergenic | 25.0% |
| ! | AGCAAAATTTCAACAAAGTT+TGG | + | chr4.2:13095558-13095577 | None:intergenic | 25.0% |
| ! | AGCATTTCTCATATATGAAT+AGG | - | chr4.2:13095731-13095750 | MS.gene08811:intron | 25.0% |
| ! | ATAATTAATATCACTCCCTA+AGG | + | chr4.2:13091794-13091813 | None:intergenic | 25.0% |
| ! | ATTAGATTGAAGAAAATACG+TGG | - | chr4.2:13096328-13096347 | MS.gene08811:intron | 25.0% |
| ! | ATTCTATGATGACAAATTGT+TGG | + | chr4.2:13093940-13093959 | None:intergenic | 25.0% |
| ! | ATTGAATATTCATAAGTCGT+TGG | - | chr4.2:13096740-13096759 | MS.gene08811:intron | 25.0% |
| ! | ATTGCACATAAAGTTTCAAA+TGG | + | chr4.2:13097110-13097129 | None:intergenic | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr4.2:13094424-13094443 | None:intergenic | 25.0% |
| ! | GAAGAAAATAAAAAATGGAG+AGG | - | chr4.2:13095118-13095137 | MS.gene08811:intron | 25.0% |
| ! | GATATAGTAGAAAAAGATCA+AGG | - | chr4.2:13097350-13097369 | MS.gene08811:CDS | 25.0% |
| ! | GATATTCCTAATTGTAGTTA+TGG | - | chr4.2:13093650-13093669 | MS.gene08811:intron | 25.0% |
| ! | GCGTAATAATAAGAGTTTAA+TGG | + | chr4.2:13091980-13091999 | None:intergenic | 25.0% |
| ! | GGGAACTATTAATAAGAAAT+TGG | + | chr4.2:13093803-13093822 | None:intergenic | 25.0% |
| ! | TAAAGTTCTTAAAAGATGTC+TGG | + | chr4.2:13093208-13093227 | None:intergenic | 25.0% |
| ! | TAAGTCAAGAAATGTCAAAT+TGG | + | chr4.2:13097402-13097421 | None:intergenic | 25.0% |
| ! | TAATGAATTCAAAGTTACAG+AGG | + | chr4.2:13092673-13092692 | None:intergenic | 25.0% |
| ! | TACAATAATGTGATACTTGA+TGG | + | chr4.2:13095064-13095083 | None:intergenic | 25.0% |
| ! | TATAGTAGAAAAAGATCAAG+GGG | - | chr4.2:13097352-13097371 | MS.gene08811:CDS | 25.0% |
| ! | TATTAGAGTTTAATGGTAGT+GGG | - | chr4.2:13091811-13091830 | MS.gene08811:CDS | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr4.2:13094425-13094444 | None:intergenic | 25.0% |
| ! | TGAACTTACTTAATTGGATA+GGG | + | chr4.2:13093825-13093844 | None:intergenic | 25.0% |
| ! | TGAATGTAGTAGTACTATAA+TGG | + | chr4.2:13093434-13093453 | None:intergenic | 25.0% |
| ! | TGATCCATCAATTAATGTTA+GGG | - | chr4.2:13096418-13096437 | MS.gene08811:intron | 25.0% |
| ! | TTATTAGAGTTTAATGGTAG+TGG | - | chr4.2:13091810-13091829 | MS.gene08811:CDS | 25.0% |
| ! | TTCAGATTTCATCAACTTAT+GGG | - | chr4.2:13096845-13096864 | MS.gene08811:intron | 25.0% |
| ! | TTGAAAACACTCATTAACAA+AGG | + | chr4.2:13094883-13094902 | None:intergenic | 25.0% |
| !! | ATAAATGAGATTGATTTCGA+CGG | - | chr4.2:13092910-13092929 | MS.gene08811:intron | 25.0% |
| !! | TTTAAGATAGTGAAGTTTCA+TGG | + | chr4.2:13091280-13091299 | None:intergenic | 25.0% |
| !!! | AAAATACTAAGAGTGTCTTT+AGG | - | chr4.2:13094604-13094623 | MS.gene08811:intron | 25.0% |
| !!! | AAATACTAAGAGTGTCTTTA+GGG | - | chr4.2:13094605-13094624 | MS.gene08811:intron | 25.0% |
| !!! | AAATGGATTGGGAAAATAAT+TGG | + | chr4.2:13093122-13093141 | None:intergenic | 25.0% |
| !!! | AACAGTTAATTTGTTGAACT+TGG | - | chr4.2:13093509-13093528 | MS.gene08811:intron | 25.0% |
| !!! | AATGGATTGGGAAAATAATT+GGG | + | chr4.2:13093121-13093140 | None:intergenic | 25.0% |
| !!! | ACGATATTCCTTTTTTTTTG+TGG | - | chr4.2:13093587-13093606 | MS.gene08811:intron | 25.0% |
| !!! | AGACATTTTAACACTTTACA+AGG | - | chr4.2:13092722-13092741 | MS.gene08811:intron | 25.0% |
| !!! | AGGTTTACACAATGTTTTTT+TGG | + | chr4.2:13092410-13092429 | None:intergenic | 25.0% |
| !!! | ATATTCCTTTTTTTTTGTGG+TGG | - | chr4.2:13093590-13093609 | MS.gene08811:intron | 25.0% |
| !!! | ATGTTACCATTTTGTTGATT+TGG | + | chr4.2:13092212-13092231 | None:intergenic | 25.0% |
| !!! | ATTATGGCAGTTTTTAAAAC+AGG | + | chr4.2:13095436-13095455 | None:intergenic | 25.0% |
| !!! | TGACACTAGTTTGAAAATTT+TGG | - | chr4.2:13097280-13097299 | MS.gene08811:CDS | 25.0% |
| AAATGACCAATTGATATGCA+AGG | - | chr4.2:13097229-13097248 | MS.gene08811:CDS | 30.0% | |
| AACTTACTTAATTGGATAGG+GGG | + | chr4.2:13093823-13093842 | None:intergenic | 30.0% | |
| AACTTGCAAGAACAAATTTG+GGG | - | chr4.2:13097062-13097081 | MS.gene08811:intron | 30.0% | |
| AAGAAATTGGTTGCAAATAC+CGG | + | chr4.2:13093790-13093809 | None:intergenic | 30.0% | |
| AATAGACTCTGTAATTTGAG+TGG | + | chr4.2:13092862-13092881 | None:intergenic | 30.0% | |
| ACAACTTGCAAGAACAAATT+TGG | - | chr4.2:13097060-13097079 | MS.gene08811:intron | 30.0% | |
| ACATAAAGTTTCAAATGGAG+GGG | + | chr4.2:13097105-13097124 | None:intergenic | 30.0% | |
| AGAAGACAGACATAAAAATG+TGG | - | chr4.2:13094637-13094656 | MS.gene08811:intron | 30.0% | |
| AGAAGACCAAATCAACAAAA+TGG | - | chr4.2:13092203-13092222 | MS.gene08811:intron | 30.0% | |
| AGAGTGAAAGGAAAGTTAAA+AGG | - | chr4.2:13092567-13092586 | MS.gene08811:intron | 30.0% | |
| AGTGTGTAGTAAACAAATCT+TGG | + | chr4.2:13097467-13097486 | None:intergenic | 30.0% | |
| ATAGACTCTGTAATTTGAGT+GGG | + | chr4.2:13092861-13092880 | None:intergenic | 30.0% | |
| ATTACACTCTTATTAACCGA+AGG | + | chr4.2:13092978-13092997 | None:intergenic | 30.0% | |
| CAACTTGCAAGAACAAATTT+GGG | - | chr4.2:13097061-13097080 | MS.gene08811:intron | 30.0% | |
| CACAAAAAGACAAAAAAGAG+AGG | + | chr4.2:13095992-13096011 | None:intergenic | 30.0% | |
| CACATAAAGTTTCAAATGGA+GGG | + | chr4.2:13097106-13097125 | None:intergenic | 30.0% | |
| CATCTCTCATAAAAATGACA+AGG | + | chr4.2:13095836-13095855 | None:intergenic | 30.0% | |
| CATGTTATAGCAACTAAACT+AGG | - | chr4.2:13095473-13095492 | MS.gene08811:intron | 30.0% | |
| CCATAAAAAATGAGAGTGAA+AGG | - | chr4.2:13092555-13092574 | MS.gene08811:intron | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr4.2:13094421-13094440 | MS.gene08811:intron | 30.0% | |
| CTAGTTTAGTTGCTATAACA+TGG | + | chr4.2:13095475-13095494 | None:intergenic | 30.0% | |
| CTTCAGATTTCATCAACTTA+TGG | - | chr4.2:13096844-13096863 | MS.gene08811:intron | 30.0% | |
| CTTTCCCTAACATTAATTGA+TGG | + | chr4.2:13096425-13096444 | None:intergenic | 30.0% | |
| GAAACTTCACTATCTTAAAG+TGG | - | chr4.2:13091281-13091300 | MS.gene08811:CDS | 30.0% | |
| GAAAGAAACTCCTAACTTTA+AGG | + | chr4.2:13094001-13094020 | None:intergenic | 30.0% | |
| GAACTTACTTAATTGGATAG+GGG | + | chr4.2:13093824-13093843 | None:intergenic | 30.0% | |
| GAAGGAGAAAATGATAATTC+TGG | + | chr4.2:13091561-13091580 | None:intergenic | 30.0% | |
| GAGTGAAAGGAAAGTTAAAA+GGG | - | chr4.2:13092568-13092587 | MS.gene08811:intron | 30.0% | |
| GATTATTATTTCATCCCTTG+CGG | - | chr4.2:13091378-13091397 | MS.gene08811:CDS | 30.0% | |
| GGATAAGATGTACATAAGTA+CGG | + | chr4.2:13095971-13095990 | None:intergenic | 30.0% | |
| GGGTACTATACCATTTAATT+TGG | + | chr4.2:13093975-13093994 | None:intergenic | 30.0% | |
| GTCAAAATATATGCAAGATC+CGG | + | chr4.2:13093630-13093649 | None:intergenic | 30.0% | |
| GTGAACTTACTTAATTGGAT+AGG | + | chr4.2:13093826-13093845 | None:intergenic | 30.0% | |
| GTGATCCATCAATTAATGTT+AGG | - | chr4.2:13096417-13096436 | MS.gene08811:intron | 30.0% | |
| GTTAGGTGAACTTACTTAAT+TGG | + | chr4.2:13093831-13093850 | None:intergenic | 30.0% | |
| TAACTCAATTTAAGTGTGGT+GGG | - | chr4.2:13096772-13096791 | MS.gene08811:intron | 30.0% | |
| TACATGACTTCTGTATGATT+TGG | + | chr4.2:13093902-13093921 | None:intergenic | 30.0% | |
| TATATTGCCAGAAGATGAAA+TGG | - | chr4.2:13097562-13097581 | MS.gene08811:CDS | 30.0% | |
| TCAGATTTCATCAACTTATG+GGG | - | chr4.2:13096846-13096865 | MS.gene08811:intron | 30.0% | |
| TGTAGTAGTACTATAATGGT+AGG | + | chr4.2:13093430-13093449 | None:intergenic | 30.0% | |
| TGTGAAATGGTTAAAAGTGA+TGG | - | chr4.2:13094663-13094682 | MS.gene08811:intron | 30.0% | |
| TTAAAGAACCTGCAACAAAA+TGG | + | chr4.2:13091583-13091602 | None:intergenic | 30.0% | |
| TTACACTCTTATTAACCGAA+GGG | + | chr4.2:13092977-13092996 | None:intergenic | 30.0% | |
| TTCATCTTCTGGCAATATAA+TGG | + | chr4.2:13097561-13097580 | None:intergenic | 30.0% | |
| TTCTACCATAAAAAGCGAAA+TGG | + | chr4.2:13093139-13093158 | None:intergenic | 30.0% | |
| TTCTTGCAAGTTGTTCATTA+GGG | + | chr4.2:13097054-13097073 | None:intergenic | 30.0% | |
| TTGTTTACTACACACTTCAA+GGG | - | chr4.2:13097471-13097490 | MS.gene08811:CDS | 30.0% | |
| TTTGTTTACTACACACTTCA+AGG | - | chr4.2:13097470-13097489 | MS.gene08811:CDS | 30.0% | |
| ! | AGTAAATCATTTATTGGCCT+TGG | - | chr4.2:13093078-13093097 | MS.gene08811:intron | 30.0% |
| ! | AGTCGTTTAAGGTTTATACA+CGG | - | chr4.2:13094335-13094354 | MS.gene08811:intron | 30.0% |
| ! | AGTTTTACCATTTCATCTTC+TGG | + | chr4.2:13097572-13097591 | None:intergenic | 30.0% |
| ! | CATAAAAAGCGAAATGGATT+GGG | + | chr4.2:13093133-13093152 | None:intergenic | 30.0% |
| ! | CTTTTCGGATCCAAAATTAA+GGG | + | chr4.2:13096934-13096953 | None:intergenic | 30.0% |
| ! | GAGTATTATTTAGAGTAGGA+GGG | + | chr4.2:13094045-13094064 | None:intergenic | 30.0% |
| ! | GATGGAGTATTATTTAGAGT+AGG | + | chr4.2:13094049-13094068 | None:intergenic | 30.0% |
| ! | GCAATACCCTTTTAAACTAA+AGG | - | chr4.2:13094777-13094796 | MS.gene08811:intron | 30.0% |
| ! | TTCTCTCCAAAAGTGAATTT+TGG | - | chr4.2:13092003-13092022 | MS.gene08811:CDS | 30.0% |
| ! | TTGTACGTGCAAAATTGTTT+TGG | + | chr4.2:13091845-13091864 | None:intergenic | 30.0% |
| ! | TTTTAGGCTCAAATTGTTCA+AGG | + | chr4.2:13096877-13096896 | None:intergenic | 30.0% |
| ! | TTTTCGGATCCAAAATTAAG+GGG | + | chr4.2:13096933-13096952 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr4.2:13094071-13094090 | None:intergenic | 30.0% |
| !! | ATTTGAGAGTATCTTCAGTT+GGG | - | chr4.2:13091199-13091218 | MS.gene08811:CDS | 30.0% |
| !! | TAAGAAAACTGAAAAGTGTC+AGG | + | chr4.2:13096054-13096073 | None:intergenic | 30.0% |
| !! | TAATTATCCCAATTTGTTGC+TGG | - | chr4.2:13095516-13095535 | MS.gene08811:intron | 30.0% |
| !!! | CCTTTCACTCTCATTTTTTA+TGG | + | chr4.2:13092558-13092577 | None:intergenic | 30.0% |
| !!! | GTGACTGATTTTTTTGTCTA+TGG | - | chr4.2:13097374-13097393 | MS.gene08811:CDS | 30.0% |
| !!! | TGTGTCCATTTTTTTGTTGT+TGG | + | chr4.2:13097009-13097028 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr4.2:13094072-13094091 | MS.gene08811:intron | 30.0% |
| AAAAGTAGCAGTGAGTAGTT+AGG | + | chr4.2:13093848-13093867 | None:intergenic | 35.0% | |
| AAATCCGAGCTTAATGTGTA+TGG | - | chr4.2:13097593-13097612 | MS.gene08811:CDS | 35.0% | |
| AACAAAGTTTGGACATGAGA+TGG | + | chr4.2:13095547-13095566 | None:intergenic | 35.0% | |
| ACGTAGTACTCTATAACTGA+AGG | + | chr4.2:13096531-13096550 | None:intergenic | 35.0% | |
| ACTGTCACATAAAGATTGAG+AGG | - | chr4.2:13092455-13092474 | MS.gene08811:intron | 35.0% | |
| AGACAATTATTATGAGACGG+AGG | - | chr4.2:13094562-13094581 | MS.gene08811:intron | 35.0% | |
| AGGAACCAGCTACATTTAAA+CGG | - | chr4.2:13096952-13096971 | MS.gene08811:intron | 35.0% | |
| AGGTTTATACACGGGTATTA+AGG | - | chr4.2:13094344-13094363 | MS.gene08811:intron | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | - | chr4.2:13094435-13094454 | MS.gene08811:intron | 35.0% | |
| ATTGAAGAAAATACGTGGTG+TGG | - | chr4.2:13096333-13096352 | MS.gene08811:intron | 35.0% | |
| ATTTACTTAACTAGTGCTCC+GGG | - | chr4.2:13094743-13094762 | MS.gene08811:intron | 35.0% | |
| CAGGTAACTCAATTTAAGTG+TGG | - | chr4.2:13096768-13096787 | MS.gene08811:intron | 35.0% | |
| CCATAAAAAGCGAAATGGAT+TGG | + | chr4.2:13093134-13093153 | None:intergenic | 35.0% | |
| CCATCAATATCATTCACCTT+AGG | + | chr4.2:13097527-13097546 | None:intergenic | 35.0% | |
| CCTAAGGTGAATGATATTGA+TGG | - | chr4.2:13097524-13097543 | MS.gene08811:CDS | 35.0% | |
| GAAGTCATGTACAGTGTTTA+TGG | - | chr4.2:13093911-13093930 | MS.gene08811:intron | 35.0% | |
| GACAATTATTATGAGACGGA+GGG | - | chr4.2:13094563-13094582 | MS.gene08811:intron | 35.0% | |
| GAGTAGTAAAGTAGAGAACA+TGG | + | chr4.2:13094023-13094042 | None:intergenic | 35.0% | |
| GATACCATACACATTAAGCT+CGG | + | chr4.2:13097600-13097619 | None:intergenic | 35.0% | |
| GATTTACTTAACTAGTGCTC+CGG | - | chr4.2:13094742-13094761 | MS.gene08811:intron | 35.0% | |
| GCACATAAAGTTTCAAATGG+AGG | + | chr4.2:13097107-13097126 | None:intergenic | 35.0% | |
| GTAACTCAATTTAAGTGTGG+TGG | - | chr4.2:13096771-13096790 | MS.gene08811:intron | 35.0% | |
| GTGTATGGTATCATGTTTGA+GGG | - | chr4.2:13097608-13097627 | MS.gene08811:CDS | 35.0% | |
| GTTAGCATGACCTAACAAAT+TGG | + | chr4.2:13092280-13092299 | None:intergenic | 35.0% | |
| GTTCTTGCAAGTTGTTCATT+AGG | + | chr4.2:13097055-13097074 | None:intergenic | 35.0% | |
| TACACTCTTATTAACCGAAG+GGG | + | chr4.2:13092976-13092995 | None:intergenic | 35.0% | |
| TAGACTCTGTAATTTGAGTG+GGG | + | chr4.2:13092860-13092879 | None:intergenic | 35.0% | |
| TCGTTTCTCAACAAGTCATT+GGG | - | chr4.2:13091535-13091554 | MS.gene08811:CDS | 35.0% | |
| TGACCTAACAAATTGGTTAC+AGG | + | chr4.2:13092273-13092292 | None:intergenic | 35.0% | |
| TGTGTATGGTATCATGTTTG+AGG | - | chr4.2:13097607-13097626 | MS.gene08811:CDS | 35.0% | |
| TGTTTACTACACACTTCAAG+GGG | - | chr4.2:13097472-13097491 | MS.gene08811:CDS | 35.0% | |
| ! | AAACTCCTAACTTTAAGGAG+AGG | + | chr4.2:13093996-13094015 | None:intergenic | 35.0% |
| ! | AACTCCTAACTTTAAGGAGA+GGG | + | chr4.2:13093995-13094014 | None:intergenic | 35.0% |
| ! | AAGCCTGTAACCAATTTGTT+AGG | - | chr4.2:13092267-13092286 | MS.gene08811:intron | 35.0% |
| ! | ATGAAATCTGAAGCTGAATG+TGG | + | chr4.2:13096837-13096856 | None:intergenic | 35.0% |
| ! | CCTTAATTTTGGATCCGAAA+AGG | - | chr4.2:13096932-13096951 | MS.gene08811:intron | 35.0% |
| ! | CCTTTTCGGATCCAAAATTA+AGG | + | chr4.2:13096935-13096954 | None:intergenic | 35.0% |
| ! | GATGTTTTTCACAATCCGAA+CGG | - | chr4.2:13091243-13091262 | MS.gene08811:CDS | 35.0% |
| ! | GGAGTATTATTTAGAGTAGG+AGG | + | chr4.2:13094046-13094065 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr4.2:13094202-13094221 | MS.gene08811:intron | 35.0% |
| ! | GTCGTTTAAGGTTTATACAC+GGG | - | chr4.2:13094336-13094355 | MS.gene08811:intron | 35.0% |
| ! | TAAAGATTGAGAGGTGTAGT+TGG | - | chr4.2:13092464-13092483 | MS.gene08811:intron | 35.0% |
| ! | TGAAATCTGAAGCTGAATGT+GGG | + | chr4.2:13096836-13096855 | None:intergenic | 35.0% |
| ! | TGACTTCTGTATGATTTGGA+AGG | + | chr4.2:13093898-13093917 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr4.2:13094206-13094225 | MS.gene08811:intron | 35.0% |
| !! | AAAATAATTGGGTTGACGGT+CGG | + | chr4.2:13093110-13093129 | None:intergenic | 35.0% |
| !! | AAAATTAAGGGGTGTTGAGA+CGG | + | chr4.2:13096922-13096941 | None:intergenic | 35.0% |
| !! | AAATGTAGCTGGTTCCTTTT+CGG | + | chr4.2:13096949-13096968 | None:intergenic | 35.0% |
| !! | AAGCCATTCATCTAGAGTTT+TGG | + | chr4.2:13091484-13091503 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4.2:13094305-13094324 | MS.gene08811:intron | 35.0% |
| !! | ATCTAGAGTTTTGGTGCAAT+TGG | + | chr4.2:13091475-13091494 | None:intergenic | 35.0% |
| !! | CTTATCTCTAGTCTTGTGAA+AGG | + | chr4.2:13096368-13096387 | None:intergenic | 35.0% |
| !! | GATTTGAGAGTATCTTCAGT+TGG | - | chr4.2:13091198-13091217 | MS.gene08811:CDS | 35.0% |
| !! | TGGGAAAATAATTGGGTTGA+CGG | + | chr4.2:13093114-13093133 | None:intergenic | 35.0% |
| !!! | CACAATGTTTTTTTGGTCAC+AGG | + | chr4.2:13092403-13092422 | None:intergenic | 35.0% |
| !!! | CCAATCCATTTCGCTTTTTA+TGG | - | chr4.2:13093131-13093150 | MS.gene08811:intron | 35.0% |
| !!! | CCATTTTTTTGTTGTTGGCT+GGG | + | chr4.2:13097004-13097023 | None:intergenic | 35.0% |
| !!! | TCCATTTTTTTGTTGTTGGC+TGG | + | chr4.2:13097005-13097024 | None:intergenic | 35.0% |
| AAATGTGGGACTGACCTTAA+TGG | + | chr4.2:13095157-13095176 | None:intergenic | 40.0% | |
| AACCTAAAGCCTGTAATGCA+AGG | - | chr4.2:13092425-13092444 | MS.gene08811:intron | 40.0% | |
| AAGCCTGTAATGCAAGGAAT+TGG | - | chr4.2:13092431-13092450 | MS.gene08811:intron | 40.0% | |
| AAGCTCTCTTTCTCTTCTTG+TGG | + | chr4.2:13091171-13091190 | None:intergenic | 40.0% | |
| ACAATCATTGCACTTGACGA+AGG | + | chr4.2:13091433-13091452 | None:intergenic | 40.0% | |
| ACACTCTTATTAACCGAAGG+GGG | + | chr4.2:13092975-13092994 | None:intergenic | 40.0% | |
| ACGGATCTTGGAATGTTGAA+GGG | + | chr4.2:13096903-13096922 | None:intergenic | 40.0% | |
| AGAACCTGCAACAAAATGGA+AGG | + | chr4.2:13091579-13091598 | None:intergenic | 40.0% | |
| AGCTCTCTTTCTCTTCTTGT+GGG | + | chr4.2:13091170-13091189 | None:intergenic | 40.0% | |
| AGTACCCTCTCCTTAAAGTT+AGG | - | chr4.2:13093988-13094007 | MS.gene08811:intron | 40.0% | |
| ATATCATTGCCCCTACCATT+GGG | + | chr4.2:13097203-13097222 | None:intergenic | 40.0% | |
| ATCACAAGCAACATGGACTT+TGG | + | chr4.2:13096402-13096421 | None:intergenic | 40.0% | |
| CAATCATTGCACTTGACGAA+GGG | + | chr4.2:13091432-13091451 | None:intergenic | 40.0% | |
| CCAATTGATATGCAAGGTTG+AGG | - | chr4.2:13097235-13097254 | MS.gene08811:CDS | 40.0% | |
| CCCAGCCAACAACAAAAAAA+TGG | - | chr4.2:13097001-13097020 | MS.gene08811:intron | 40.0% | |
| CCTCAACCTTGCATATCAAT+TGG | + | chr4.2:13097238-13097257 | None:intergenic | 40.0% | |
| CTCGTTTCTCAACAAGTCAT+TGG | - | chr4.2:13091534-13091553 | MS.gene08811:CDS | 40.0% | |
| GATCTTAAACCCCTCCATTA+AGG | - | chr4.2:13095140-13095159 | MS.gene08811:intron | 40.0% | |
| GCACCAAAACTCTAGATGAA+TGG | - | chr4.2:13091478-13091497 | MS.gene08811:CDS | 40.0% | |
| GGAACCAGCTACATTTAAAC+GGG | - | chr4.2:13096953-13096972 | MS.gene08811:intron | 40.0% | |
| GGGCAACACAAATTGTTAAG+AGG | - | chr4.2:13096483-13096502 | MS.gene08811:intron | 40.0% | |
| GGTAGGGGCAATGATATAAT+GGG | - | chr4.2:13097206-13097225 | MS.gene08811:CDS | 40.0% | |
| GGTTTACTTCTTTGACTCTG+AGG | - | chr4.2:13091302-13091321 | MS.gene08811:CDS | 40.0% | |
| TAATATCACTCCCTAAGGCA+AGG | + | chr4.2:13091789-13091808 | None:intergenic | 40.0% | |
| TATATCATTGCCCCTACCAT+TGG | + | chr4.2:13097204-13097223 | None:intergenic | 40.0% | |
| TCAACCCGTTTAAATGTAGC+TGG | + | chr4.2:13096960-13096979 | None:intergenic | 40.0% | |
| TCACAAGACTAGAGATAAGC+TGG | - | chr4.2:13096369-13096388 | MS.gene08811:intron | 40.0% | |
| TCATTAGGGAGCTAGTTATG+TGG | + | chr4.2:13097040-13097059 | None:intergenic | 40.0% | |
| TGGTAGGGGCAATGATATAA+TGG | - | chr4.2:13097205-13097224 | MS.gene08811:intron | 40.0% | |
| TTAGATGGCTAACAAGTTGC+TGG | - | chr4.2:13095931-13095950 | MS.gene08811:intron | 40.0% | |
| TTCCTTGCATTACAGGCTTT+AGG | + | chr4.2:13092430-13092449 | None:intergenic | 40.0% | |
| TTCGTCAAGTGCAATGATTG+TGG | - | chr4.2:13091432-13091451 | MS.gene08811:CDS | 40.0% | |
| TTGAGAAACGAGCAACTTGT+AGG | + | chr4.2:13091526-13091545 | None:intergenic | 40.0% | |
| TTTACTTAACTAGTGCTCCG+GGG | - | chr4.2:13094744-13094763 | MS.gene08811:intron | 40.0% | |
| ! | AAGCAACATGGACTTTGGAA+TGG | + | chr4.2:13096397-13096416 | None:intergenic | 40.0% |
| ! | AAGTGTGGTGGGATTTCATT+GGG | - | chr4.2:13096783-13096802 | MS.gene08811:intron | 40.0% |
| ! | CTTAATTGTTAGGCCTTGTG+CGG | + | chr4.2:13091328-13091347 | None:intergenic | 40.0% |
| ! | GAATGTTGAAGGGCAGTTTT+AGG | + | chr4.2:13096893-13096912 | None:intergenic | 40.0% |
| ! | GTCTCAACACCCCTTAATTT+TGG | - | chr4.2:13096921-13096940 | MS.gene08811:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr4.2:13094205-13094224 | MS.gene08811:intron | 40.0% |
| ! | TAAGTGTGGTGGGATTTCAT+TGG | - | chr4.2:13096782-13096801 | MS.gene08811:intron | 40.0% |
| ! | TTCTCCTTCCATTTTGTTGC+AGG | - | chr4.2:13091572-13091591 | MS.gene08811:CDS | 40.0% |
| ! | TTGATGGATCACAAGCAACA+TGG | + | chr4.2:13096409-13096428 | None:intergenic | 40.0% |
| !! | AACTGAAAAGTGTCAGGTGT+TGG | + | chr4.2:13096048-13096067 | None:intergenic | 40.0% |
| !! | AATGGCTTGCTATGATGGAT+TGG | - | chr4.2:13091496-13091515 | MS.gene08811:CDS | 40.0% |
| !! | AGATGAATGGCTTGCTATGA+TGG | - | chr4.2:13091491-13091510 | MS.gene08811:CDS | 40.0% |
| !! | TAAGAGTGTCTTTAGGGCAT+TGG | - | chr4.2:13094611-13094630 | MS.gene08811:intron | 40.0% |
| !! | TACATTTAAACGGGTTGACC+CGG | - | chr4.2:13096962-13096981 | MS.gene08811:intron | 40.0% |
| !!! | AATTTTGGCTAGCATGCTTG+TGG | - | chr4.2:13097295-13097314 | MS.gene08811:CDS | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+TGG | - | chr4.2:13094309-13094328 | MS.gene08811:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+TGG | + | chr4.2:13094328-13094309 | None:intergenic | 40.0% |
| !!! | TCATAAGTCGTTGGTTTTGC+AGG | - | chr4.2:13096749-13096768 | MS.gene08811:intron | 40.0% |
| !!! | TCCTTTTTTTTTGTGGTGGC+CGG | - | chr4.2:13093594-13093613 | MS.gene08811:intron | 40.0% |
| !!! | TGTTGTTTTGGTGCTTCCTA+AGG | - | chr4.2:13097508-13097527 | MS.gene08811:CDS | 40.0% |
| AAGATCCGGAGTTCGAATTC+CGG | + | chr4.2:13093616-13093635 | None:intergenic | 45.0% | |
| AATTGAGAGAACACCCCCTT+CGG | - | chr4.2:13092959-13092978 | MS.gene08811:intron | 45.0% | |
| ACGGATGGAGTAGTCGTTTA+AGG | - | chr4.2:13094324-13094343 | MS.gene08811:intron | 45.0% | |
| CGACTCTAACACAATTTCGC+CGG | - | chr4.2:13093768-13093787 | MS.gene08811:intron | 45.0% | |
| GAAACGAGCAACTTGTAGGA+AGG | + | chr4.2:13091522-13091541 | None:intergenic | 45.0% | |
| GACGGATCTTGGAATGTTGA+AGG | + | chr4.2:13096904-13096923 | None:intergenic | 45.0% | |
| GATAGTGAAGTTTCATGGCC+AGG | + | chr4.2:13091275-13091294 | None:intergenic | 45.0% | |
| GATTTCATTGGGCCTTAGCT+GGG | - | chr4.2:13096794-13096813 | MS.gene08811:intron | 45.0% | |
| GGACAGACCAGCAACAAATT+GGG | + | chr4.2:13095526-13095545 | None:intergenic | 45.0% | |
| GGTCAGTCCCACATTTATCA+AGG | - | chr4.2:13095161-13095180 | MS.gene08811:intron | 45.0% | |
| GTGCCAATTCCTTGCATTAC+AGG | + | chr4.2:13092437-13092456 | None:intergenic | 45.0% | |
| TACTACACACTTCAAGGGGT+GGG | - | chr4.2:13097476-13097495 | MS.gene08811:CDS | 45.0% | |
| TAGGGAGCTAGTTATGTGGA+AGG | + | chr4.2:13097036-13097055 | None:intergenic | 45.0% | |
| TATCATTGCCCCTACCATTG+GGG | + | chr4.2:13097202-13097221 | None:intergenic | 45.0% | |
| TCCGGCCACCACAAAAAAAA+AGG | + | chr4.2:13093598-13093617 | None:intergenic | 45.0% | |
| TGGACAGACCAGCAACAAAT+TGG | + | chr4.2:13095527-13095546 | None:intergenic | 45.0% | |
| TTACTACACACTTCAAGGGG+TGG | - | chr4.2:13097475-13097494 | MS.gene08811:CDS | 45.0% | |
| TTACTTAACTAGTGCTCCGG+GGG | - | chr4.2:13094745-13094764 | MS.gene08811:intron | 45.0% | |
| TTCGTACTCTCCTTGCCTTA+GGG | - | chr4.2:13091776-13091795 | MS.gene08811:CDS | 45.0% | |
| TTGATATGCAAGGTTGAGGC+AGG | - | chr4.2:13097239-13097258 | MS.gene08811:CDS | 45.0% | |
| TTGTGGAGCAAGAACCATTG+AGG | - | chr4.2:13091449-13091468 | MS.gene08811:CDS | 45.0% | |
| TTTCGTACTCTCCTTGCCTT+AGG | - | chr4.2:13091775-13091794 | MS.gene08811:CDS | 45.0% | |
| ! | CTCAGTGGTGTCAATAGTGA+TGG | + | chr4.2:13095594-13095613 | None:intergenic | 45.0% |
| ! | TTTGGTGCAATTGGCCTCAA+TGG | + | chr4.2:13091466-13091485 | None:intergenic | 45.0% |
| ! | TTTTCACAATCCGAACGGCT+TGG | - | chr4.2:13091248-13091267 | MS.gene08811:CDS | 45.0% |
| !!! | GGGAGATGAAGGTGTTGTTT+TGG | - | chr4.2:13097496-13097515 | MS.gene08811:CDS | 45.0% |
| !!! | TGTTTTAAATAAAAATTTTA+AGG | - | chr4.2:13092048-13092067 | MS.gene08811:intron | 5.0% |
| AACTGTCACGGTTGTGGGTT+CGG | + | chr4.2:13097168-13097187 | None:intergenic | 50.0% | |
| AATGTGGGTCCCCCATAACA+TGG | + | chr4.2:13096821-13096840 | None:intergenic | 50.0% | |
| ATGTGGGTCCCCCATAACAT+GGG | + | chr4.2:13096820-13096839 | None:intergenic | 50.0% | |
| CGACAAACTGTCACGGTTGT+GGG | + | chr4.2:13097173-13097192 | None:intergenic | 50.0% | |
| CTTAGCTGGGCCCATGTTAT+GGG | - | chr4.2:13096807-13096826 | MS.gene08811:intron | 50.0% | |
| GCTAGCATGCTTGTGGATCA+AGG | - | chr4.2:13097302-13097321 | MS.gene08811:CDS | 50.0% | |
| GGATCCAATGATCACCAACC+GGG | + | chr4.2:13096983-13097002 | None:intergenic | 50.0% | |
| GGATTTCATTGGGCCTTAGC+TGG | - | chr4.2:13096793-13096812 | MS.gene08811:intron | 50.0% | |
| GGGATCCAATGATCACCAAC+CGG | + | chr4.2:13096984-13097003 | None:intergenic | 50.0% | |
| GTATTGCTAACCAATGCCCC+CGG | + | chr4.2:13094764-13094783 | None:intergenic | 50.0% | |
| GTGAAAAACATCCGACCCAG+TGG | + | chr4.2:13091235-13091254 | None:intergenic | 50.0% | |
| GTGGGACTGACCTTAATGGA+GGG | + | chr4.2:13095153-13095172 | None:intergenic | 50.0% | |
| GTTCGGATCCTTCTCGAACT+CGG | + | chr4.2:13097151-13097170 | None:intergenic | 50.0% | |
| TCGACAAACTGTCACGGTTG+TGG | + | chr4.2:13097174-13097193 | None:intergenic | 50.0% | |
| TGGGACTGACCTTAATGGAG+GGG | + | chr4.2:13095152-13095171 | None:intergenic | 50.0% | |
| TGTGGGACTGACCTTAATGG+AGG | + | chr4.2:13095154-13095173 | None:intergenic | 50.0% | |
| TTAGCTGGGCCCATGTTATG+GGG | - | chr4.2:13096808-13096827 | MS.gene08811:intron | 50.0% | |
| TTCGGATCCTTCTCGAACTC+GGG | + | chr4.2:13097150-13097169 | None:intergenic | 50.0% | |
| ! | AGAGTATCTTCAGTTGGGCC+AGG | - | chr4.2:13091204-13091223 | MS.gene08811:CDS | 50.0% |
| ! | GGAGGGGTTTGTTCAACACT+TGG | + | chr4.2:13097089-13097108 | None:intergenic | 50.0% |
| ! | TGTGCATGAGAGTATGTGCG+AGG | - | chr4.2:13096008-13096027 | MS.gene08811:intron | 50.0% |
| !! | TTGACCCGGTTGGTGATCAT+TGG | - | chr4.2:13096976-13096995 | MS.gene08811:intron | 50.0% |
| !! | TTTAAACGGGTTGACCCGGT+TGG | - | chr4.2:13096966-13096985 | MS.gene08811:intron | 50.0% |
| ATTGCCCCTACCATTGGGGT+CGG | + | chr4.2:13097198-13097217 | None:intergenic | 55.0% | |
| CAGATTCCGATCGCCGGAAT+CGG | + | chr4.2:13091404-13091423 | None:intergenic | 55.0% | |
| CCATAACATGGGCCCAGCTA+AGG | + | chr4.2:13096809-13096828 | None:intergenic | 55.0% | |
| CCTTAGCTGGGCCCATGTTA+TGG | - | chr4.2:13096806-13096825 | MS.gene08811:intron | 55.0% | |
| CTTCAAGGGGTGGGAGATGA+AGG | - | chr4.2:13097485-13097504 | MS.gene08811:CDS | 55.0% | |
| GTCGGGTCGACAAACTGTCA+CGG | + | chr4.2:13097180-13097199 | None:intergenic | 55.0% | |
| TAGCTGGGCCCATGTTATGG+GGG | - | chr4.2:13096809-13096828 | MS.gene08811:intron | 55.0% | |
| TGCATAGCCCGAGTTCGAGA+AGG | - | chr4.2:13097140-13097159 | MS.gene08811:intron | 55.0% | |
| TTGACGGTCGGTCTCAACCA+AGG | + | chr4.2:13093098-13093117 | None:intergenic | 55.0% | |
| !! | AGGGGTGTTGAGACGGATCT+TGG | + | chr4.2:13096915-13096934 | None:intergenic | 55.0% |
| !! | TTTGACTCTGAGGCCGCACA+AGG | - | chr4.2:13091312-13091331 | MS.gene08811:CDS | 55.0% |
| ATGGCCAGGTCCAAGCCGTT+CGG | + | chr4.2:13091261-13091280 | None:intergenic | 60.0% | |
| CGATTCCGGCGATCGGAATC+TGG | - | chr4.2:13091402-13091421 | MS.gene08811:CDS | 60.0% | |
| GGTGGCCGGAATTCGAACTC+CGG | - | chr4.2:13093608-13093627 | MS.gene08811:intron | 60.0% | |
| GTCGACCAGATTCCGATCGC+CGG | + | chr4.2:13091410-13091429 | None:intergenic | 60.0% | |
| GTTTGTCGACCCGACCCCAA+TGG | - | chr4.2:13097185-13097204 | MS.gene08811:intron | 60.0% | |
| TCGACCCGACCCCAATGGTA+GGG | - | chr4.2:13097190-13097209 | MS.gene08811:intron | 60.0% | |
| TTGCCCCTACCATTGGGGTC+GGG | + | chr4.2:13097197-13097216 | None:intergenic | 60.0% | |
| TTGGGCCAGGTCATGCCACT+GGG | - | chr4.2:13091217-13091236 | MS.gene08811:CDS | 60.0% | |
| ! | AACTAGTGCTCCGGGGGCAT+TGG | - | chr4.2:13094751-13094770 | MS.gene08811:intron | 60.0% |
| ! | CAATCCGAACGGCTTGGACC+TGG | - | chr4.2:13091254-13091273 | MS.gene08811:CDS | 60.0% |
| ! | TCATCCCTTGCGGCCGATTC+CGG | - | chr4.2:13091388-13091407 | MS.gene08811:CDS | 60.0% |
| ATCGCCGGAATCGGCCGCAA+GGG | + | chr4.2:13091395-13091414 | None:intergenic | 65.0% | |
| CGACCCGACCCCAATGGTAG+GGG | - | chr4.2:13097191-13097210 | MS.gene08811:intron | 65.0% | |
| GCCAGGTCATGCCACTGGGT+CGG | - | chr4.2:13091221-13091240 | MS.gene08811:CDS | 65.0% | |
| GTCGACCCGACCCCAATGGT+AGG | - | chr4.2:13097189-13097208 | MS.gene08811:intron | 65.0% | |
| GTTGGGCCAGGTCATGCCAC+TGG | - | chr4.2:13091216-13091235 | MS.gene08811:CDS | 65.0% | |
| TCCGACCCAGTGGCATGACC+TGG | + | chr4.2:13091225-13091244 | None:intergenic | 65.0% | |
| ! | TTGCGGCCGATTCCGGCGAT+CGG | - | chr4.2:13091395-13091414 | MS.gene08811:CDS | 65.0% |
| GATCGCCGGAATCGGCCGCA+AGG | + | chr4.2:13091396-13091415 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 13091159 | 13097640 | 13091159 | ID=MS.gene08811 |
| chr4.2 | mRNA | 13091159 | 13097640 | 13091159 | ID=MS.gene08811.t1;Parent=MS.gene08811 |
| chr4.2 | exon | 13097206 | 13097640 | 13097206 | ID=MS.gene08811.t1.exon1;Parent=MS.gene08811.t1 |
| chr4.2 | CDS | 13097206 | 13097640 | 13097206 | ID=cds.MS.gene08811.t1;Parent=MS.gene08811.t1 |
| chr4.2 | exon | 13091159 | 13092028 | 13091159 | ID=MS.gene08811.t1.exon2;Parent=MS.gene08811.t1 |
| chr4.2 | CDS | 13091159 | 13092028 | 13091159 | ID=cds.MS.gene08811.t1;Parent=MS.gene08811.t1 |
| Gene Sequence |
| Protein sequence |
