Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09137.t1 | XP_003606324.1 | 97.2 | 542 | 11 | 2 | 1 | 538 | 1 | 542 | 0.00E+00 | 1094.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09137.t1 | Q9FYC2 | 69.8 | 523 | 145 | 5 | 28 | 538 | 16 | 537 | 8.9e-226 | 784.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09137.t1 | G7JM88 | 97.2 | 542 | 11 | 2 | 1 | 538 | 1 | 542 | 0.0e+00 | 1094.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049757 | MS.gene09137 | 0.946075 | 9.20E-105 | -1.69E-46 |
| MS.gene050060 | MS.gene09137 | 0.819454 | 1.15E-52 | -1.69E-46 |
| MS.gene050133 | MS.gene09137 | -0.821943 | 3.09E-53 | -1.69E-46 |
| MS.gene050553 | MS.gene09137 | 0.829485 | 5.01E-55 | -1.69E-46 |
| MS.gene051521 | MS.gene09137 | 0.819409 | 1.18E-52 | -1.69E-46 |
| MS.gene052100 | MS.gene09137 | 0.808678 | 2.75E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene09137 | 0.864115 | 1.53E-64 | -1.69E-46 |
| MS.gene053889 | MS.gene09137 | 0.840073 | 1.08E-57 | -1.69E-46 |
| MS.gene054107 | MS.gene09137 | 0.812364 | 4.40E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene09137 | 0.85689 | 2.37E-62 | -1.69E-46 |
| MS.gene055741 | MS.gene09137 | 0.867906 | 9.69E-66 | -1.69E-46 |
| MS.gene055744 | MS.gene09137 | 0.870776 | 1.13E-66 | -1.69E-46 |
| MS.gene056233 | MS.gene09137 | 0.805557 | 1.26E-49 | -1.69E-46 |
| MS.gene056508 | MS.gene09137 | 0.823618 | 1.26E-53 | -1.69E-46 |
| MS.gene057019 | MS.gene09137 | 0.802344 | 5.87E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene09137 | 0.840201 | 1.00E-57 | -1.69E-46 |
| MS.gene058448 | MS.gene09137 | 0.854553 | 1.14E-61 | -1.69E-46 |
| MS.gene059717 | MS.gene09137 | 0.871501 | 6.51E-67 | -1.69E-46 |
| MS.gene059946 | MS.gene09137 | 0.801054 | 1.08E-48 | -1.69E-46 |
| MS.gene060372 | MS.gene09137 | 0.826907 | 2.10E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09137.t1 | MTR_4g057200 | 97.232 | 542 | 11 | 2 | 1 | 538 | 1 | 542 | 0.0 | 1088 |
| MS.gene09137.t1 | MTR_8g085840 | 35.448 | 536 | 285 | 20 | 31 | 535 | 22 | 527 | 1.62e-92 | 293 |
| MS.gene09137.t1 | MTR_8g085790 | 34.535 | 527 | 295 | 16 | 32 | 538 | 4 | 500 | 8.15e-91 | 288 |
| MS.gene09137.t1 | MTR_8g085820 | 35.150 | 532 | 285 | 20 | 32 | 535 | 4 | 503 | 3.47e-89 | 284 |
| MS.gene09137.t1 | MTR_8g085790 | 37.696 | 382 | 201 | 11 | 31 | 392 | 22 | 386 | 6.19e-71 | 232 |
| MS.gene09137.t1 | MTR_3g105820 | 29.140 | 477 | 275 | 17 | 74 | 516 | 84 | 531 | 3.29e-52 | 187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09137.t1 | AT3G44880 | 69.981 | 523 | 144 | 5 | 28 | 538 | 16 | 537 | 0.0 | 774 |
| MS.gene09137.t1 | AT4G25650 | 33.401 | 494 | 263 | 15 | 80 | 537 | 73 | 536 | 3.91e-83 | 268 |
| MS.gene09137.t1 | AT4G25650 | 32.108 | 517 | 262 | 16 | 80 | 537 | 73 | 559 | 8.65e-80 | 260 |
| MS.gene09137.t1 | AT2G24820 | 27.273 | 561 | 327 | 19 | 14 | 528 | 8 | 533 | 3.15e-52 | 186 |
Find 127 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTACGCCGTTTCAGCTTC+TGG | 0.120106 | 4.1:-41052999 | MS.gene09137:CDS |
| CACTTCTAACTGTTACTAAA+AGG | 0.221780 | 4.1:+41053173 | None:intergenic |
| ATAACATGGTGCAATAAATT+TGG | 0.238122 | 4.1:+41050756 | None:intergenic |
| ATCTCCTCTCCATAGGTTAC+AGG | 0.261578 | 4.1:-41050874 | MS.gene09137:intron |
| CTGCTCTTGCCGAACCATTC+AGG | 0.272155 | 4.1:+41049747 | None:intergenic |
| CCGTGAGCTGGAAGAAATTT+CGG | 0.273333 | 4.1:+41050278 | None:intergenic |
| CTCAGGGGTTGCTCTTTGTT+TGG | 0.280938 | 4.1:-41052232 | MS.gene09137:CDS |
| ATATCCATATTACCCATTTC+TGG | 0.295421 | 4.1:+41050356 | None:intergenic |
| GATGAAAAGAGAAACGGTTT+TGG | 0.304587 | 4.1:+41053253 | None:intergenic |
| GTTTCCTACCTTGGTGTCTC+AGG | 0.305187 | 4.1:-41052249 | MS.gene09137:CDS |
| AGATCTTCAATCAAAGAAAC+TGG | 0.305622 | 4.1:+41053034 | None:intergenic |
| GACCCAACAGCACGTGCTTC+GGG | 0.313223 | 4.1:+41052293 | None:intergenic |
| CCTACGCCGTTTCAGCTTCT+GGG | 0.330171 | 4.1:-41052998 | MS.gene09137:CDS |
| TACTCAGCTGTGCATAGTTT+TGG | 0.332726 | 4.1:-41049443 | MS.gene09137:CDS |
| TTCTTCCAGCTCACGGTGCC+AGG | 0.334083 | 4.1:-41050271 | MS.gene09137:CDS |
| CCGTGGTTGGTGACCAGAAA+TGG | 0.334810 | 4.1:-41050369 | MS.gene09137:CDS |
| CGTGAGCTGGAAGAAATTTC+GGG | 0.348878 | 4.1:+41050279 | None:intergenic |
| TGCTACTAGGTTTCCTACCT+TGG | 0.353927 | 4.1:-41052258 | MS.gene09137:CDS |
| GTGACCAGAAATGGGTAATA+TGG | 0.353988 | 4.1:-41050360 | MS.gene09137:CDS |
| GTTAATGTCACCGCCATTCT+CGG | 0.368858 | 4.1:+41049863 | None:intergenic |
| TTGTGTTGGCATTTAGAAAT+TGG | 0.374763 | 4.1:-41049794 | MS.gene09137:CDS |
| CTCCTAGAGCTTGTGCTACT+AGG | 0.377564 | 4.1:-41052271 | MS.gene09137:CDS |
| GTCACCAACCACGGGGAGTT+TGG | 0.380037 | 4.1:+41050378 | None:intergenic |
| GTCCCGAAGCACGTGCTGTT+GGG | 0.382522 | 4.1:-41052295 | MS.gene09137:CDS |
| GCACGTGCTTCGGGACCTTC+AGG | 0.385222 | 4.1:+41052302 | None:intergenic |
| TTTCCTACCTTGGTGTCTCA+GGG | 0.397685 | 4.1:-41052248 | MS.gene09137:CDS |
| AGATGGATTCACGTGGTTCA+TGG | 0.404907 | 4.1:-41050819 | MS.gene09137:CDS |
| TCACGGTGCCAGGGCCTGCC+TGG | 0.405008 | 4.1:-41050261 | MS.gene09137:CDS |
| TTTGTTTGGCCTGATGAGAA+TGG | 0.405990 | 4.1:-41052218 | MS.gene09137:CDS |
| CAGGCCCTGGCACCGTGAGC+TGG | 0.407256 | 4.1:+41050266 | None:intergenic |
| TTCTCCCAACCATTCTCATC+AGG | 0.410926 | 4.1:+41052209 | None:intergenic |
| GGTCCCGAAGCACGTGCTGT+TGG | 0.411995 | 4.1:-41052296 | MS.gene09137:CDS |
| AGACCCAACAGCACGTGCTT+CGG | 0.420220 | 4.1:+41052292 | None:intergenic |
| ACTTGCCACCAGGCAGGCCC+TGG | 0.430231 | 4.1:+41050253 | None:intergenic |
| AATTGTGATTTGGTTTGATA+AGG | 0.439736 | 4.1:-41052969 | MS.gene09137:CDS |
| AGCTTGTAAAGGAGCTTATG+AGG | 0.440308 | 4.1:-41049539 | MS.gene09137:CDS |
| TTGATAAGGCTAATTCTCAA+TGG | 0.441751 | 4.1:-41052955 | MS.gene09137:CDS |
| GATGGATTCACGTGGTTCAT+GGG | 0.447972 | 4.1:-41050818 | MS.gene09137:CDS |
| TGGGTCGTGAAATTGTGATT+TGG | 0.454744 | 4.1:-41052979 | MS.gene09137:CDS |
| ATCCCTCAGGCTTCACCTGA+AGG | 0.455756 | 4.1:-41052317 | MS.gene09137:CDS |
| TGATAAGGCTAATTCTCAAT+GGG | 0.464457 | 4.1:-41052954 | MS.gene09137:CDS |
| TGAAACGGCGTAGGCAAACT+AGG | 0.465653 | 4.1:+41053007 | None:intergenic |
| AACTTGCAGTGTTCTTATCA+TGG | 0.471539 | 4.1:-41052374 | MS.gene09137:CDS |
| TAAACAAATCATTACATTGG+AGG | 0.472678 | 4.1:+41052170 | None:intergenic |
| CCACGTGAATCCATCTTGAA+TGG | 0.476840 | 4.1:+41050826 | None:intergenic |
| ATGATCTCTCCATGAAAACT+TGG | 0.478510 | 4.1:+41053063 | None:intergenic |
| TGTCTCAGGTGGTTCCTAGA+TGG | 0.480851 | 4.1:-41049968 | MS.gene09137:intron |
| ACACAACTGTTGCACCAGTC+AGG | 0.489551 | 4.1:+41049494 | None:intergenic |
| ATCTCTCCATGAAAACTTGG+AGG | 0.489699 | 4.1:+41053066 | None:intergenic |
| CGTGGTTGGTGACCAGAAAT+GGG | 0.494565 | 4.1:-41050368 | MS.gene09137:CDS |
| GTGAAGGATGAAAAGAGAAA+CGG | 0.495635 | 4.1:+41053247 | None:intergenic |
| ATGTTCACCGTCGCAAACTC+TGG | 0.495962 | 4.1:+41051826 | None:intergenic |
| CGAGTCTTACCAGGTGCCAT+GGG | 0.496305 | 4.1:+41050319 | None:intergenic |
| AACCGTACTATCAAAACGTC+AGG | 0.497409 | 4.1:-41049706 | MS.gene09137:intron |
| AATGGCCAACCTGAATGGTT+CGG | 0.505921 | 4.1:-41049756 | MS.gene09137:CDS |
| TTCAATGTCCCCATGGCACC+TGG | 0.510022 | 4.1:-41050328 | MS.gene09137:CDS |
| TTTGGCCTGATGAGAATGGT+TGG | 0.514461 | 4.1:-41052214 | MS.gene09137:CDS |
| CCGAAATTTCTTCCAGCTCA+CGG | 0.515590 | 4.1:-41050278 | MS.gene09137:CDS |
| GCGAGTCTTACCAGGTGCCA+TGG | 0.519997 | 4.1:+41050318 | None:intergenic |
| ACGGCAATGGCCAACCTGAA+TGG | 0.522604 | 4.1:-41049761 | MS.gene09137:CDS |
| TGCAGTGTTCTTATCATGGG+TGG | 0.523912 | 4.1:-41052370 | MS.gene09137:CDS |
| CTAAAGTGTTCAGCTTGTAA+AGG | 0.524879 | 4.1:-41049550 | MS.gene09137:CDS |
| TGGCTGAGGCGACACGGCAA+TGG | 0.525095 | 4.1:-41049774 | MS.gene09137:CDS |
| AGGTGCCATGGGGACATTGA+AGG | 0.525388 | 4.1:+41050330 | None:intergenic |
| GTACGGTTGAAGGCAATGGC+TGG | 0.525732 | 4.1:+41049721 | None:intergenic |
| CATCTTGAATGGAAGAGGCT+TGG | 0.526200 | 4.1:+41050837 | None:intergenic |
| TCACGACCCAGAAGCTGAAA+CGG | 0.528461 | 4.1:+41052992 | None:intergenic |
| TTGGCCTGATGAGAATGGTT+GGG | 0.528911 | 4.1:-41052213 | MS.gene09137:CDS |
| GAATCCATCTTGAATGGAAG+AGG | 0.529803 | 4.1:+41050832 | None:intergenic |
| ACTTGCAGTGTTCTTATCAT+GGG | 0.533069 | 4.1:-41052373 | MS.gene09137:CDS |
| CATTTCTGGTCACCAACCAC+GGG | 0.533924 | 4.1:+41050370 | None:intergenic |
| CTACGGCTATGATACTCTCA+TGG | 0.535693 | 4.1:-41051788 | MS.gene09137:CDS |
| CGGTGCCAGGGCCTGCCTGG+TGG | 0.541920 | 4.1:-41050258 | MS.gene09137:CDS |
| ACGATGGAGCGAGTCTTACC+AGG | 0.542041 | 4.1:+41050310 | None:intergenic |
| TTTCTCGCAGAAACCGAGAA+TGG | 0.544070 | 4.1:-41049876 | MS.gene09137:CDS |
| GTCCAATGTTCATACCATCT+AGG | 0.546736 | 4.1:+41049954 | None:intergenic |
| GGTGACATGATTGTACTTCA+AGG | 0.548561 | 4.1:-41049912 | MS.gene09137:CDS |
| TCTTCCAGCTCACGGTGCCA+GGG | 0.550242 | 4.1:-41050270 | MS.gene09137:CDS |
| CAAGCCTCTTCCATTCAAGA+TGG | 0.553250 | 4.1:-41050836 | MS.gene09137:CDS |
| ATGCACAGCTGAGTATCTGA+TGG | 0.556973 | 4.1:+41049451 | None:intergenic |
| GATAGTACGGTTGAAGGCAA+TGG | 0.559294 | 4.1:+41049717 | None:intergenic |
| CTTATGAGGGATTCCAAACA+TGG | 0.560004 | 4.1:-41049525 | MS.gene09137:CDS |
| AATCTTACTTGCCACCAGGC+AGG | 0.562524 | 4.1:+41050247 | None:intergenic |
| ATCGGCCTGTGTTGGTGTGA+AGG | 0.562936 | 4.1:+41049821 | None:intergenic |
| ACAGGCCGATCGCTTTGTGT+TGG | 0.566142 | 4.1:-41049808 | MS.gene09137:CDS |
| AACCTAGTAGCACAAGCTCT+AGG | 0.570794 | 4.1:+41052269 | None:intergenic |
| CCATTTCTGGTCACCAACCA+CGG | 0.571640 | 4.1:+41050369 | None:intergenic |
| GACCTTCAGGTGAAGCCTGA+GGG | 0.571686 | 4.1:+41052315 | None:intergenic |
| AGGTTGTACTGTGATCCCTC+AGG | 0.574608 | 4.1:-41052330 | MS.gene09137:CDS |
| TTCCTAGATGGTATGAACAT+TGG | 0.578101 | 4.1:-41049956 | MS.gene09137:CDS |
| ACAAAGCGATCGGCCTGTGT+TGG | 0.578127 | 4.1:+41049813 | None:intergenic |
| GCTTGTAAAGGAGCTTATGA+GGG | 0.580240 | 4.1:-41049538 | MS.gene09137:CDS |
| ATGGATTCACGTGGTTCATG+GGG | 0.586611 | 4.1:-41050817 | MS.gene09137:CDS |
| TGGCATTTAGAAATTGGCTG+AGG | 0.593473 | 4.1:-41049788 | MS.gene09137:CDS |
| TCTTGCCGAACCATTCAGGT+TGG | 0.593673 | 4.1:+41049751 | None:intergenic |
| TTCCTACCTTGGTGTCTCAG+GGG | 0.601778 | 4.1:-41052247 | MS.gene09137:CDS |
| AGAAATTGGCTGAGGCGACA+CGG | 0.601844 | 4.1:-41049780 | MS.gene09137:CDS |
| GATACCAAACTCCCCGTGGT+TGG | 0.603630 | 4.1:-41050382 | MS.gene09137:CDS |
| AAAACCACACTTACAGACAA+AGG | 0.604363 | 4.1:+41052896 | None:intergenic |
| AAATGCCAACACAAAGCGAT+CGG | 0.604570 | 4.1:+41049803 | None:intergenic |
| TAAATTTGGAACTGATCCGT+GGG | 0.605118 | 4.1:+41050770 | None:intergenic |
| ACATGGCAGAAAATCCTGAC+TGG | 0.607454 | 4.1:-41049508 | MS.gene09137:CDS |
| CCATTCAAGATGGATTCACG+TGG | 0.609365 | 4.1:-41050826 | MS.gene09137:CDS |
| CCTCACCTTCACACCAACAC+AGG | 0.610530 | 4.1:-41049826 | MS.gene09137:CDS |
| ATGTTCCTTCAATGTCCCCA+TGG | 0.611264 | 4.1:-41050335 | MS.gene09137:CDS |
| ATAAATTTGGAACTGATCCG+TGG | 0.611314 | 4.1:+41050769 | None:intergenic |
| TGAGCAAAATCAATGTGAGA+AGG | 0.619222 | 4.1:+41051751 | None:intergenic |
| GACAAAGGAGCAAGACGATG+AGG | 0.622297 | 4.1:+41052911 | None:intergenic |
| ATTTCGGGCACTGCAAACGA+TGG | 0.623592 | 4.1:+41050294 | None:intergenic |
| CCTGTGTTGGTGTGAAGGTG+AGG | 0.628478 | 4.1:+41049826 | None:intergenic |
| GGACCTTCAGGTGAAGCCTG+AGG | 0.630949 | 4.1:+41052314 | None:intergenic |
| TAGAAATCTTACTTGCCACC+AGG | 0.633598 | 4.1:+41050243 | None:intergenic |
| GAGCTAATGATGGGAACCCA+CGG | 0.640090 | 4.1:-41050786 | MS.gene09137:CDS |
| TACTTGTTAATATAATAACA+TGG | 0.641143 | 4.1:+41050742 | None:intergenic |
| GATCTTCAATCAAAGAAACT+GGG | 0.643659 | 4.1:+41053035 | None:intergenic |
| TGAACATTGGACTTCAAACA+AGG | 0.656690 | 4.1:-41049943 | MS.gene09137:CDS |
| CTCGCAGAAACCGAGAATGG+CGG | 0.656709 | 4.1:-41049873 | MS.gene09137:CDS |
| ACTTCAAACAAGGTATATGA+CGG | 0.664094 | 4.1:-41049933 | MS.gene09137:CDS |
| GAGCAACCCCTGAGACACCA+AGG | 0.666033 | 4.1:+41052241 | None:intergenic |
| CCCAGAAGCTGAAACGGCGT+AGG | 0.671253 | 4.1:+41052998 | None:intergenic |
| CCTCTCCATAGGTTACAGGA+AGG | 0.690079 | 4.1:-41050870 | MS.gene09137:intron |
| AACCCCTGAGACACCAAGGT+AGG | 0.706906 | 4.1:+41052245 | None:intergenic |
| TGTAAAACCAGAGTTTGCGA+CGG | 0.708528 | 4.1:-41051833 | MS.gene09137:CDS |
| GAGTCTTACCAGGTGCCATG+GGG | 0.713819 | 4.1:+41050320 | None:intergenic |
| GATCGATACCAAACTCCCCG+TGG | 0.727360 | 4.1:-41050386 | MS.gene09137:CDS |
| GAAGGAAGGATTGATGAACG+TGG | 0.729199 | 4.1:-41052398 | MS.gene09137:CDS |
| ATTTCTGGTCACCAACCACG+GGG | 0.751627 | 4.1:+41050371 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAAAACTATTCTTTTA+TGG | + | chr4.1:41052065-41052084 | None:intergenic | 10.0% |
| !!! | TAATTAATTTTTAATCACTT+AGG | - | chr4.1:41051260-41051279 | MS.gene09137:intron | 10.0% |
| !! | AATTAAACAAATCATTACAT+TGG | + | chr4.1:41050494-41050513 | None:intergenic | 15.0% |
| !! | ATAAATTTATCAAATCCAAA+AGG | + | chr4.1:41051628-41051647 | None:intergenic | 15.0% |
| !! | TAAATTTATCAAATCCAAAA+GGG | + | chr4.1:41051627-41051646 | None:intergenic | 15.0% |
| !! | TTAGAAAAATTGTTGTAATT+GGG | - | chr4.1:41050708-41050727 | MS.gene09137:intron | 15.0% |
| !!! | AATTAAGAACTATTTTTTTC+AGG | - | chr4.1:41052244-41052263 | MS.gene09137:CDS | 15.0% |
| !!! | AATTTTTAATTGAAAAAGGA+CGG | - | chr4.1:41052080-41052099 | MS.gene09137:intron | 15.0% |
| !!! | TACTTGTTAATATAATAACA+TGG | + | chr4.1:41051919-41051938 | None:intergenic | 15.0% |
| !! | AAATTTAATTAAGCCATGTT+TGG | - | chr4.1:41049821-41049840 | MS.gene09137:CDS | 20.0% |
| !! | CTTAGAAAAATTGTTGTAAT+TGG | - | chr4.1:41050707-41050726 | MS.gene09137:intron | 20.0% |
| !! | TAAAAATCTTCCGAATAAAA+TGG | + | chr4.1:41052582-41052601 | None:intergenic | 20.0% |
| !! | TATAACATAACATTTCTAAG+TGG | + | chr4.1:41050734-41050753 | None:intergenic | 20.0% |
| !!! | AAACAAAATTGTTTTTCAGT+TGG | + | chr4.1:41053284-41053303 | None:intergenic | 20.0% |
| !!! | ATTATTAGGTATTGTTTGTT+AGG | - | chr4.1:41051734-41051753 | MS.gene09137:intron | 20.0% |
| !!! | TTATTAGGTATTGTTTGTTA+GGG | - | chr4.1:41051735-41051754 | MS.gene09137:intron | 20.0% |
| !!! | TTCTATGAAACCATTTTATT+CGG | - | chr4.1:41052569-41052588 | MS.gene09137:intron | 20.0% |
| !!! | TTGCTATTAAGAATTTATCT+AGG | - | chr4.1:41051167-41051186 | MS.gene09137:intron | 20.0% |
| ! | AGCATCAAATAACGTAAAAT+GGG | + | chr4.1:41051995-41052014 | None:intergenic | 25.0% |
| ! | ATAACATGGTGCAATAAATT+TGG | + | chr4.1:41051905-41051924 | None:intergenic | 25.0% |
| ! | ATAACTTATAAACATGTCAC+AGG | - | chr4.1:41049949-41049968 | MS.gene09137:CDS | 25.0% |
| ! | ATGAACTATGTACTTGTTTA+TGG | - | chr4.1:41052039-41052058 | MS.gene09137:intron | 25.0% |
| ! | GTTATAAGTAAGTGTATGTT+TGG | + | chr4.1:41050091-41050110 | None:intergenic | 25.0% |
| ! | TAAACAAATCATTACATTGG+AGG | + | chr4.1:41050491-41050510 | None:intergenic | 25.0% |
| ! | TATAAATTGGTACAGGATAT+TGG | + | chr4.1:41051494-41051513 | None:intergenic | 25.0% |
| ! | TTAAAAGCTAGATATGAAGA+CGG | - | chr4.1:41051347-41051366 | MS.gene09137:intron | 25.0% |
| ! | TTAGATCATTGAACCTATTA+TGG | + | chr4.1:41050642-41050661 | None:intergenic | 25.0% |
| ! | TTGTAGGAGTTGAAATTATT+AGG | - | chr4.1:41051720-41051739 | MS.gene09137:intron | 25.0% |
| !! | AGTACTTTTCATATGAATTC+TGG | - | chr4.1:41051960-41051979 | MS.gene09137:intron | 25.0% |
| !! | AGTTGATATAAGTCCATAAT+AGG | - | chr4.1:41050626-41050645 | MS.gene09137:intron | 25.0% |
| !! | ATGGTAAAATTGTGTTTTTC+AGG | - | chr4.1:41050788-41050807 | MS.gene09137:CDS | 25.0% |
| !! | ATTGAATTTGAAGTTGTTAG+AGG | - | chr4.1:41049797-41049816 | MS.gene09137:CDS | 25.0% |
| !! | CGGAAGATTTTTAAACAAAT+TGG | - | chr4.1:41052589-41052608 | MS.gene09137:intron | 25.0% |
| !! | TTGAATTTGAAGTTGTTAGA+GGG | - | chr4.1:41049798-41049817 | MS.gene09137:CDS | 25.0% |
| !!! | AAAAGGTTTTTTCTGTTTCT+GGG | + | chr4.1:41049471-41049490 | None:intergenic | 25.0% |
| !!! | AAATTGTGACTTTTTTGTGA+AGG | + | chr4.1:41049430-41049449 | None:intergenic | 25.0% |
| !!! | AATTGTGATTTGGTTTGATA+AGG | - | chr4.1:41049689-41049708 | MS.gene09137:intron | 25.0% |
| !!! | ACCTTTTTAGCAAAACAAAA+GGG | - | chr4.1:41051287-41051306 | MS.gene09137:intron | 25.0% |
| !!! | ATTGTTTTTCAGTTGGTTTA+TGG | + | chr4.1:41053277-41053296 | None:intergenic | 25.0% |
| !!! | CTTATTTTCATTTGTTCTTC+AGG | + | chr4.1:41049923-41049942 | None:intergenic | 25.0% |
| !!! | GTAAACTGATCTTTAAGATT+TGG | - | chr4.1:41050224-41050243 | MS.gene09137:intron | 25.0% |
| !!! | TAAAAGGTTTTTTCTGTTTC+TGG | + | chr4.1:41049472-41049491 | None:intergenic | 25.0% |
| !!! | TCAAAGTTGTGTTTTATTCT+TGG | + | chr4.1:41053033-41053052 | None:intergenic | 25.0% |
| !!! | TCTTCATATCTAGCTTTTAA+AGG | + | chr4.1:41051347-41051366 | None:intergenic | 25.0% |
| !!! | TTCTAGGATAAAATATTTCC+AGG | - | chr4.1:41052636-41052655 | MS.gene09137:intron | 25.0% |
| !!! | TTTGTTTTTCATGTAGATGT+TGG | - | chr4.1:41053065-41053084 | MS.gene09137:CDS | 25.0% |
| AAATATATGTGATGCTGATG+TGG | - | chr4.1:41051054-41051073 | MS.gene09137:intron | 30.0% | |
| ACAGCAAATAATTTCTGTCA+AGG | + | chr4.1:41052524-41052543 | None:intergenic | 30.0% | |
| ACATGAACAAGAAAATCGTT+AGG | + | chr4.1:41052673-41052692 | None:intergenic | 30.0% | |
| ACTTCAAACAAGGTATATGA+CGG | - | chr4.1:41052725-41052744 | MS.gene09137:intron | 30.0% | |
| AGATCTTCAATCAAAGAAAC+TGG | + | chr4.1:41049627-41049646 | None:intergenic | 30.0% | |
| AGTAAGTGTATGTTTGGTAT+AGG | + | chr4.1:41050085-41050104 | None:intergenic | 30.0% | |
| ATATCCATATTACCCATTTC+TGG | + | chr4.1:41052305-41052324 | None:intergenic | 30.0% | |
| CACTTCTAACTGTTACTAAA+AGG | + | chr4.1:41049488-41049507 | None:intergenic | 30.0% | |
| CAGCATCAAATAACGTAAAA+TGG | + | chr4.1:41051996-41052015 | None:intergenic | 30.0% | |
| CTAAGAAACCAACATAACTA+GGG | + | chr4.1:41050692-41050711 | None:intergenic | 30.0% | |
| GATCTTCAATCAAAGAAACT+GGG | + | chr4.1:41049626-41049645 | None:intergenic | 30.0% | |
| GTGTTTGGGTACTTATAAAT+TGG | + | chr4.1:41051507-41051526 | None:intergenic | 30.0% | |
| TATATTAACAAGTAAGCCAG+CGG | - | chr4.1:41051925-41051944 | MS.gene09137:intron | 30.0% | |
| TCTAAGAAACCAACATAACT+AGG | + | chr4.1:41050693-41050712 | None:intergenic | 30.0% | |
| TGATAAGGCTAATTCTCAAT+GGG | - | chr4.1:41049704-41049723 | MS.gene09137:intron | 30.0% | |
| TTAAGCCATGTTTGGATAAA+CGG | - | chr4.1:41049829-41049848 | MS.gene09137:CDS | 30.0% | |
| TTATGGACTTATATCAACTC+AGG | + | chr4.1:41050625-41050644 | None:intergenic | 30.0% | |
| TTGATAAGGCTAATTCTCAA+TGG | - | chr4.1:41049703-41049722 | MS.gene09137:intron | 30.0% | |
| TTGGTTTATGGAAAAAGCTA+AGG | + | chr4.1:41053265-41053284 | None:intergenic | 30.0% | |
| TTTACCATGCAGATCAATAA+AGG | + | chr4.1:41050776-41050795 | None:intergenic | 30.0% | |
| TTTCTTAACCTGAAAAAGCA+CGG | + | chr4.1:41051194-41051213 | None:intergenic | 30.0% | |
| ! | ACTGTTTTCTTTCCATTTGT+TGG | - | chr4.1:41052208-41052227 | MS.gene09137:CDS | 30.0% |
| ! | GTTTTGTAGACAATGGAAAA+CGG | + | chr4.1:41053011-41053030 | None:intergenic | 30.0% |
| ! | TTGTGTTGGCATTTAGAAAT+TGG | - | chr4.1:41052864-41052883 | MS.gene09137:intron | 30.0% |
| !! | ACTGATCTTTAAGATTTGGT+TGG | - | chr4.1:41050228-41050247 | MS.gene09137:intron | 30.0% |
| !! | CACCTTTTTAGCAAAACAAA+AGG | - | chr4.1:41051286-41051305 | MS.gene09137:intron | 30.0% |
| !! | CACTCTTTAACTTGACTTTA+TGG | - | chr4.1:41050947-41050966 | MS.gene09137:intron | 30.0% |
| !! | TGAAAAGTACTTTCATGCAA+AGG | + | chr4.1:41051951-41051970 | None:intergenic | 30.0% |
| !!! | ATTCTTGGTTTTGTAGACAA+TGG | + | chr4.1:41053018-41053037 | None:intergenic | 30.0% |
| !!! | CATATCTAGCTTTTAAAGGA+GGG | + | chr4.1:41051343-41051362 | None:intergenic | 30.0% |
| !!! | TCATATCTAGCTTTTAAAGG+AGG | + | chr4.1:41051344-41051363 | None:intergenic | 30.0% |
| !!! | TCCCTTTTGTTTTGCTAAAA+AGG | + | chr4.1:41051291-41051310 | None:intergenic | 30.0% |
| AAAACCACACTTACAGACAA+AGG | + | chr4.1:41049765-41049784 | None:intergenic | 35.0% | |
| AACTTGCAGTGTTCTTATCA+TGG | - | chr4.1:41050284-41050303 | MS.gene09137:CDS | 35.0% | |
| ACAGTGATATGTCAGAATCA+CGG | - | chr4.1:41050007-41050026 | MS.gene09137:intron | 35.0% | |
| ACTTATTTGAGCTCATCTAG+TGG | + | chr4.1:41050146-41050165 | None:intergenic | 35.0% | |
| ACTTGCAGTGTTCTTATCAT+GGG | - | chr4.1:41050285-41050304 | MS.gene09137:CDS | 35.0% | |
| ATACACCGTTTATCCAAACA+TGG | + | chr4.1:41049837-41049856 | None:intergenic | 35.0% | |
| ATCACTGTGATACCAAACAT+AGG | + | chr4.1:41049995-41050014 | None:intergenic | 35.0% | |
| ATGATCTCTCCATGAAAACT+TGG | + | chr4.1:41049598-41049617 | None:intergenic | 35.0% | |
| ATGGAAAGAAAACAGTGACA+AGG | + | chr4.1:41052204-41052223 | None:intergenic | 35.0% | |
| GCTAAATACCCTAGTTATGT+TGG | - | chr4.1:41050681-41050700 | MS.gene09137:intron | 35.0% | |
| GGGTACTTATAAATTGGTAC+AGG | + | chr4.1:41051501-41051520 | None:intergenic | 35.0% | |
| GTATAGGTATGTCAGAATCA+CGG | + | chr4.1:41050069-41050088 | None:intergenic | 35.0% | |
| GTGAAGGATGAAAAGAGAAA+CGG | + | chr4.1:41049414-41049433 | None:intergenic | 35.0% | |
| TGAACATTGGACTTCAAACA+AGG | - | chr4.1:41052715-41052734 | MS.gene09137:intron | 35.0% | |
| TGAGCAAAATCAATGTGAGA+AGG | + | chr4.1:41050910-41050929 | None:intergenic | 35.0% | |
| TGGCATAAACACTTAGCTTA+TGG | + | chr4.1:41050126-41050145 | None:intergenic | 35.0% | |
| TTATAAGTACCCAAACACCT+GGG | - | chr4.1:41051509-41051528 | MS.gene09137:intron | 35.0% | |
| TTCCTAGATGGTATGAACAT+TGG | - | chr4.1:41052702-41052721 | MS.gene09137:intron | 35.0% | |
| TTTATAAGTACCCAAACACC+TGG | - | chr4.1:41051508-41051527 | MS.gene09137:intron | 35.0% | |
| ! | AGTTTTCATGGAGAGATCAT+TGG | - | chr4.1:41049598-41049617 | MS.gene09137:intron | 35.0% |
| ! | ATAAATTTGGAACTGATCCG+TGG | + | chr4.1:41051892-41051911 | None:intergenic | 35.0% |
| ! | ATTTCGTTCTTTTCAGCTTC+TGG | + | chr4.1:41049543-41049562 | None:intergenic | 35.0% |
| ! | CTAAAGTGTTCAGCTTGTAA+AGG | - | chr4.1:41053108-41053127 | MS.gene09137:CDS | 35.0% |
| ! | GATGAAAAGAGAAACGGTTT+TGG | + | chr4.1:41049408-41049427 | None:intergenic | 35.0% |
| ! | GATTTTCTTGTTCATGTCTC+AGG | - | chr4.1:41052676-41052695 | MS.gene09137:intron | 35.0% |
| ! | GGTTTTCAGTGTCTTAGAAA+GGG | + | chr4.1:41051473-41051492 | None:intergenic | 35.0% |
| ! | TAAATTTGGAACTGATCCGT+GGG | + | chr4.1:41051891-41051910 | None:intergenic | 35.0% |
| ! | TGGTTTTCAGTGTCTTAGAA+AGG | + | chr4.1:41051474-41051493 | None:intergenic | 35.0% |
| ! | TTTCGTTCTTTTCAGCTTCT+GGG | + | chr4.1:41049542-41049561 | None:intergenic | 35.0% |
| !! | AATTTTGATCTCCTCTCCAT+AGG | - | chr4.1:41051777-41051796 | MS.gene09137:CDS | 35.0% |
| !! | TACCTGACGTTTTGATAGTA+CGG | + | chr4.1:41052957-41052976 | None:intergenic | 35.0% |
| !! | TTCTTTCCATTTGTTGGTTC+TGG | - | chr4.1:41052214-41052233 | MS.gene09137:CDS | 35.0% |
| !!! | AAGATTTGGTTGGTTTTTGC+AGG | - | chr4.1:41050238-41050257 | MS.gene09137:intron | 35.0% |
| !!! | CATTGATTTTGCTCATCACA+AGG | - | chr4.1:41050915-41050934 | MS.gene09137:intron | 35.0% |
| !!! | GGTTTTGGAGGTTTATTTCT+TGG | + | chr4.1:41049393-41049412 | None:intergenic | 35.0% |
| !!! | TCTGGTTTTACAAAGTCATC+AGG | + | chr4.1:41050817-41050836 | None:intergenic | 35.0% |
| AAACATAGGCTAAGAGCTTC+TGG | + | chr4.1:41049981-41050000 | None:intergenic | 40.0% | |
| AAATGCCAACACAAAGCGAT+CGG | + | chr4.1:41052858-41052877 | None:intergenic | 40.0% | |
| AAATTCCTGTCCCAGTAGTA+TGG | + | chr4.1:41051604-41051623 | None:intergenic | 40.0% | |
| AACCGTACTATCAAAACGTC+AGG | - | chr4.1:41052952-41052971 | MS.gene09137:CDS | 40.0% | |
| AACTTGACTTTATGGTGTGC+TGG | - | chr4.1:41050955-41050974 | MS.gene09137:intron | 40.0% | |
| AAGAAAACAGTGACAAGGCT+AGG | + | chr4.1:41052199-41052218 | None:intergenic | 40.0% | |
| ACCTTGCTTCTACAAAGTCA+CGG | - | chr4.1:41050036-41050055 | MS.gene09137:intron | 40.0% | |
| ACGGTATCTACCTCGATATT+TGG | - | chr4.1:41052099-41052118 | MS.gene09137:intron | 40.0% | |
| AGAAGCTCTTAGCCTATGTT+TGG | - | chr4.1:41049980-41049999 | MS.gene09137:intron | 40.0% | |
| AGCTTGTAAAGGAGCTTATG+AGG | - | chr4.1:41053119-41053138 | MS.gene09137:CDS | 40.0% | |
| ATCCTAGAAGTCGATGTTAG+AGG | + | chr4.1:41052625-41052644 | None:intergenic | 40.0% | |
| ATCGAGCATTCCATACTACT+GGG | - | chr4.1:41051591-41051610 | MS.gene09137:intron | 40.0% | |
| ATCTCTCCATGAAAACTTGG+AGG | + | chr4.1:41049595-41049614 | None:intergenic | 40.0% | |
| CCTCGATATTTGGATGATTG+CGG | - | chr4.1:41052109-41052128 | MS.gene09137:intron | 40.0% | |
| CTATCGACATAAGCAGTTGT+AGG | - | chr4.1:41051704-41051723 | MS.gene09137:intron | 40.0% | |
| CTGTCAATGAAACATTCACG+TGG | + | chr4.1:41052477-41052496 | None:intergenic | 40.0% | |
| CTTATGAGGGATTCCAAACA+TGG | - | chr4.1:41053133-41053152 | MS.gene09137:CDS | 40.0% | |
| GAATCCATCTTGAATGGAAG+AGG | + | chr4.1:41051829-41051848 | None:intergenic | 40.0% | |
| GCTTGTAAAGGAGCTTATGA+GGG | - | chr4.1:41053120-41053139 | MS.gene09137:CDS | 40.0% | |
| GGTGACATGATTGTACTTCA+AGG | - | chr4.1:41052746-41052765 | MS.gene09137:intron | 40.0% | |
| GTCCAATGTTCATACCATCT+AGG | + | chr4.1:41052707-41052726 | None:intergenic | 40.0% | |
| GTGACCAGAAATGGGTAATA+TGG | - | chr4.1:41052298-41052317 | MS.gene09137:CDS | 40.0% | |
| TAGAAATCTTACTTGCCACC+AGG | + | chr4.1:41052418-41052437 | None:intergenic | 40.0% | |
| TAGTAAGTACCCGAGCATTT+GGG | - | chr4.1:41051314-41051333 | MS.gene09137:intron | 40.0% | |
| TATAAGTACCCAAACACCTG+GGG | - | chr4.1:41051510-41051529 | MS.gene09137:intron | 40.0% | |
| TGACTTTGTAGAAGCAAGGT+GGG | + | chr4.1:41050036-41050055 | None:intergenic | 40.0% | |
| TGGCATTTAGAAATTGGCTG+AGG | - | chr4.1:41052870-41052889 | MS.gene09137:intron | 40.0% | |
| TGGGTCGTGAAATTGTGATT+TGG | - | chr4.1:41049679-41049698 | MS.gene09137:intron | 40.0% | |
| TGTAAAACCAGAGTTTGCGA+CGG | - | chr4.1:41050825-41050844 | MS.gene09137:CDS | 40.0% | |
| TGTGCCTTTATTGATCTGCA+TGG | - | chr4.1:41050769-41050788 | MS.gene09137:CDS | 40.0% | |
| TTAGTAAGTACCCGAGCATT+TGG | - | chr4.1:41051313-41051332 | MS.gene09137:intron | 40.0% | |
| TTTCTTGTTCATGTCTCAGG+TGG | - | chr4.1:41052679-41052698 | MS.gene09137:intron | 40.0% | |
| TTTGTTTGGCCTGATGAGAA+TGG | - | chr4.1:41050440-41050459 | MS.gene09137:intron | 40.0% | |
| ! | ATTCAGCGCGATCTTTTCTA+CGG | - | chr4.1:41050853-41050872 | MS.gene09137:CDS | 40.0% |
| ! | GGGTACGATTCAGTTTTTGT+GGG | + | chr4.1:41049522-41049541 | None:intergenic | 40.0% |
| ! | GTTCTTCCTCCAAGTTTTCA+TGG | - | chr4.1:41049586-41049605 | MS.gene09137:intron | 40.0% |
| ! | TACGATTCAGTTTTTGTGGG+TGG | + | chr4.1:41049519-41049538 | None:intergenic | 40.0% |
| ! | TACTCAGCTGTGCATAGTTT+TGG | - | chr4.1:41053215-41053234 | MS.gene09137:CDS | 40.0% |
| ! | TATCATGGGTGGTCTTTTGA+TGG | - | chr4.1:41050299-41050318 | MS.gene09137:CDS | 40.0% |
| ! | TCAGGATTTTCTGCCATGTT+TGG | + | chr4.1:41053149-41053168 | None:intergenic | 40.0% |
| ! | TGGGTACGATTCAGTTTTTG+TGG | + | chr4.1:41049523-41049542 | None:intergenic | 40.0% |
| !! | AACCTCTAACATCGACTTCT+AGG | - | chr4.1:41052620-41052639 | MS.gene09137:intron | 40.0% |
| !! | CGTTTTGATAGTACGGTTGA+AGG | + | chr4.1:41052950-41052969 | None:intergenic | 40.0% |
| !! | GAAAAGAGAAACGGTTTTGG+AGG | + | chr4.1:41049405-41049424 | None:intergenic | 40.0% |
| !! | GCTTTTCAGGAGCTAATGAT+GGG | - | chr4.1:41051863-41051882 | MS.gene09137:intron | 40.0% |
| !! | GTAGCTAGCTTTGAAGGAAA+GGG | + | chr4.1:41051538-41051557 | None:intergenic | 40.0% |
| !!! | CGTGGTTTTATAGCAGAGAA+TGG | + | chr4.1:41052459-41052478 | None:intergenic | 40.0% |
| !!! | GTTGCTTGCATTTTTAGCCT+TGG | + | chr4.1:41051560-41051579 | None:intergenic | 40.0% |
| !!! | TTTGGTTGGTTTTTGCAGGA+AGG | - | chr4.1:41050242-41050261 | MS.gene09137:intron | 40.0% |
| AACCTAGTAGCACAAGCTCT+AGG | + | chr4.1:41050392-41050411 | None:intergenic | 45.0% | |
| AATGGCCAACCTGAATGGTT+CGG | - | chr4.1:41052902-41052921 | MS.gene09137:intron | 45.0% | |
| ACATGGCAGAAAATCCTGAC+TGG | - | chr4.1:41053150-41053169 | MS.gene09137:CDS | 45.0% | |
| ACCGTGACTTTGTAGAAGCA+AGG | + | chr4.1:41050040-41050059 | None:intergenic | 45.0% | |
| ACTGAGCCAGAACCAACAAA+TGG | + | chr4.1:41052223-41052242 | None:intergenic | 45.0% | |
| AGTAAGTACCCGAGCATTTG+GGG | - | chr4.1:41051315-41051334 | MS.gene09137:intron | 45.0% | |
| ATAAGTACCCAAACACCTGG+GGG | - | chr4.1:41051511-41051530 | MS.gene09137:intron | 45.0% | |
| ATCTCCTCTCCATAGGTTAC+AGG | - | chr4.1:41051784-41051803 | MS.gene09137:CDS | 45.0% | |
| ATGCACAGCTGAGTATCTGA+TGG | + | chr4.1:41053210-41053229 | None:intergenic | 45.0% | |
| ATGGATTCACGTGGTTCATG+GGG | - | chr4.1:41051841-41051860 | MS.gene09137:CDS | 45.0% | |
| ATGTTCCTTCAATGTCCCCA+TGG | - | chr4.1:41052323-41052342 | MS.gene09137:CDS | 45.0% | |
| CAAGCCTCTTCCATTCAAGA+TGG | - | chr4.1:41051822-41051841 | MS.gene09137:CDS | 45.0% | |
| CAGTAGTATGGAATGCTCGA+TGG | + | chr4.1:41051592-41051611 | None:intergenic | 45.0% | |
| CATCGAGCATTCCATACTAC+TGG | - | chr4.1:41051590-41051609 | MS.gene09137:intron | 45.0% | |
| CATCTTGAATGGAAGAGGCT+TGG | + | chr4.1:41051824-41051843 | None:intergenic | 45.0% | |
| CCACGTGAATCCATCTTGAA+TGG | + | chr4.1:41051835-41051854 | None:intergenic | 45.0% | |
| CCGAAATTTCTTCCAGCTCA+CGG | - | chr4.1:41052380-41052399 | MS.gene09137:CDS | 45.0% | |
| CCGCAATCATCCAAATATCG+AGG | + | chr4.1:41052112-41052131 | None:intergenic | 45.0% | |
| CCGTGAGCTGGAAGAAATTT+CGG | + | chr4.1:41052383-41052402 | None:intergenic | 45.0% | |
| CGTGAGCTGGAAGAAATTTC+GGG | + | chr4.1:41052382-41052401 | None:intergenic | 45.0% | |
| CTACGGCTATGATACTCTCA+TGG | - | chr4.1:41050870-41050889 | MS.gene09137:intron | 45.0% | |
| GAAGGAAGGATTGATGAACG+TGG | - | chr4.1:41050260-41050279 | MS.gene09137:CDS | 45.0% | |
| GATAGTACGGTTGAAGGCAA+TGG | + | chr4.1:41052944-41052963 | None:intergenic | 45.0% | |
| GCTCTCTACGATGCTTTACT+CGG | - | chr4.1:41051419-41051438 | MS.gene09137:intron | 45.0% | |
| GTGACTTTGTAGAAGCAAGG+TGG | + | chr4.1:41050037-41050056 | None:intergenic | 45.0% | |
| GTGATATGTCAGAATCACGG+TGG | - | chr4.1:41050010-41050029 | MS.gene09137:intron | 45.0% | |
| GTTAATGTCACCGCCATTCT+CGG | + | chr4.1:41052798-41052817 | None:intergenic | 45.0% | |
| TCCTTCAAAGCTAGCTACCA+AGG | - | chr4.1:41051540-41051559 | MS.gene09137:intron | 45.0% | |
| TCTCTCCTTCCTGTAACCTA+TGG | + | chr4.1:41051796-41051815 | None:intergenic | 45.0% | |
| TGCAGTGTTCTTATCATGGG+TGG | - | chr4.1:41050288-41050307 | MS.gene09137:CDS | 45.0% | |
| TGCTACTAGGTTTCCTACCT+TGG | - | chr4.1:41050400-41050419 | MS.gene09137:intron | 45.0% | |
| TGCTCCTTTGTCTGTAAGTG+TGG | - | chr4.1:41049758-41049777 | MS.gene09137:CDS | 45.0% | |
| TGCTTCTACAAAGTCACGGT+AGG | - | chr4.1:41050040-41050059 | MS.gene09137:intron | 45.0% | |
| TTCTCCCAACCATTCTCATC+AGG | + | chr4.1:41050452-41050471 | None:intergenic | 45.0% | |
| TTGGCCTGATGAGAATGGTT+GGG | - | chr4.1:41050445-41050464 | MS.gene09137:intron | 45.0% | |
| TTTCTCGCAGAAACCGAGAA+TGG | - | chr4.1:41052782-41052801 | MS.gene09137:intron | 45.0% | |
| TTTGGCCTGATGAGAATGGT+TGG | - | chr4.1:41050444-41050463 | MS.gene09137:intron | 45.0% | |
| ! | AGATGGATTCACGTGGTTCA+TGG | - | chr4.1:41051839-41051858 | MS.gene09137:CDS | 45.0% |
| ! | CCATTCAAGATGGATTCACG+TGG | - | chr4.1:41051832-41051851 | MS.gene09137:CDS | 45.0% |
| ! | CGTTAGGATTTGCTTGTTCC+TGG | + | chr4.1:41052657-41052676 | None:intergenic | 45.0% |
| ! | GATGGATTCACGTGGTTCAT+GGG | - | chr4.1:41051840-41051859 | MS.gene09137:CDS | 45.0% |
| ! | TGGGACAGGAATTTCCCTTT+TGG | - | chr4.1:41051610-41051629 | MS.gene09137:intron | 45.0% |
| !! | GGCTTTTCAGGAGCTAATGA+TGG | - | chr4.1:41051862-41051881 | MS.gene09137:intron | 45.0% |
| !! | GGTAGCTAGCTTTGAAGGAA+AGG | + | chr4.1:41051539-41051558 | None:intergenic | 45.0% |
| !! | TTTCCTACCTTGGTGTCTCA+GGG | - | chr4.1:41050410-41050429 | MS.gene09137:intron | 45.0% |
| !!! | ATCTAGGACCGTGCTTTTTC+AGG | - | chr4.1:41051183-41051202 | MS.gene09137:intron | 45.0% |
| !!! | GTTGGTTTTTGCAGGAAGGA+AGG | - | chr4.1:41050246-41050265 | MS.gene09137:intron | 45.0% |
| !! | ATATATAATTAATTAATCTT+TGG | + | chr4.1:41051081-41051100 | None:intergenic | 5.0% |
| !! | TGATTAAAAATTAATTAAAT+TGG | + | chr4.1:41051257-41051276 | None:intergenic | 5.0% |
| !!! | TTTTAATTTTTAATTGAAAA+AGG | - | chr4.1:41052076-41052095 | MS.gene09137:intron | 5.0% |
| AATCTTACTTGCCACCAGGC+AGG | + | chr4.1:41052414-41052433 | None:intergenic | 50.0% | |
| ACACAACTGTTGCACCAGTC+AGG | + | chr4.1:41053167-41053186 | None:intergenic | 50.0% | |
| AGAAATTGGCTGAGGCGACA+CGG | - | chr4.1:41052878-41052897 | MS.gene09137:intron | 50.0% | |
| AGGTTGTACTGTGATCCCTC+AGG | - | chr4.1:41050328-41050347 | MS.gene09137:CDS | 50.0% | |
| ATCAGCTGTCATGGGATGCT+TGG | + | chr4.1:41051387-41051406 | None:intergenic | 50.0% | |
| ATGTTCACCGTCGCAAACTC+TGG | + | chr4.1:41050835-41050854 | None:intergenic | 50.0% | |
| CCTCTCCATAGGTTACAGGA+AGG | - | chr4.1:41051788-41051807 | MS.gene09137:CDS | 50.0% | |
| CCTTCCTGTAACCTATGGAG+AGG | + | chr4.1:41051791-41051810 | None:intergenic | 50.0% | |
| CTCAGGGGTTGCTCTTTGTT+TGG | - | chr4.1:41050426-41050445 | MS.gene09137:intron | 50.0% | |
| GACAAAGGAGCAAGACGATG+AGG | + | chr4.1:41049750-41049769 | None:intergenic | 50.0% | |
| GCATTCCATACTACTGGGAC+AGG | - | chr4.1:41051596-41051615 | MS.gene09137:intron | 50.0% | |
| GTCTTAGAAAGGGCTCCCTA+TGG | + | chr4.1:41051463-41051482 | None:intergenic | 50.0% | |
| TACTTTCATGCAAAGGCCGC+TGG | + | chr4.1:41051944-41051963 | None:intergenic | 50.0% | |
| TCACGACCCAGAAGCTGAAA+CGG | + | chr4.1:41049669-41049688 | None:intergenic | 50.0% | |
| TCTTGCCGAACCATTCAGGT+TGG | + | chr4.1:41052910-41052929 | None:intergenic | 50.0% | |
| TGAAACGGCGTAGGCAAACT+AGG | + | chr4.1:41049654-41049673 | None:intergenic | 50.0% | |
| TGGATGATTGCGGCATCATG+CGG | - | chr4.1:41052119-41052138 | MS.gene09137:intron | 50.0% | |
| TGTCTCAGGTGGTTCCTAGA+TGG | - | chr4.1:41052690-41052709 | MS.gene09137:intron | 50.0% | |
| TTAGAAAGGGCTCCCTATGG+AGG | + | chr4.1:41051460-41051479 | None:intergenic | 50.0% | |
| TTCCGATCAGTGCCTCCATA+GGG | - | chr4.1:41051445-41051464 | MS.gene09137:intron | 50.0% | |
| TTTCCGATCAGTGCCTCCAT+AGG | - | chr4.1:41051444-41051463 | MS.gene09137:intron | 50.0% | |
| ! | ATTTCGGGCACTGCAAACGA+TGG | + | chr4.1:41052367-41052386 | None:intergenic | 50.0% |
| ! | CTCCTAGAGCTTGTGCTACT+AGG | - | chr4.1:41050387-41050406 | MS.gene09137:CDS | 50.0% |
| ! | GAGCTAATGATGGGAACCCA+CGG | - | chr4.1:41051872-41051891 | MS.gene09137:intron | 50.0% |
| ! | GTTGTGTTTTGCGCGACTTC+TGG | - | chr4.1:41053180-41053199 | MS.gene09137:CDS | 50.0% |
| !! | ATTTCTGGTCACCAACCACG+GGG | + | chr4.1:41052290-41052309 | None:intergenic | 50.0% |
| !! | CATTTCTGGTCACCAACCAC+GGG | + | chr4.1:41052291-41052310 | None:intergenic | 50.0% |
| !! | CCATTTCTGGTCACCAACCA+CGG | + | chr4.1:41052292-41052311 | None:intergenic | 50.0% |
| !! | CGTGGTTGGTGACCAGAAAT+GGG | - | chr4.1:41052290-41052309 | MS.gene09137:CDS | 50.0% |
| !! | GCCTTGGTAGCTAGCTTTGA+AGG | + | chr4.1:41051544-41051563 | None:intergenic | 50.0% |
| !! | GTTTCCTACCTTGGTGTCTC+AGG | - | chr4.1:41050409-41050428 | MS.gene09137:intron | 50.0% |
| !! | TGGTCTTTTGATGGACGTGG+AGG | - | chr4.1:41050308-41050327 | MS.gene09137:CDS | 50.0% |
| !! | TTCCTACCTTGGTGTCTCAG+GGG | - | chr4.1:41050411-41050430 | MS.gene09137:intron | 50.0% |
| AAAGGGTCCCCCAGGTGTTT+GGG | + | chr4.1:41051521-41051540 | None:intergenic | 55.0% | |
| AACCCCTGAGACACCAAGGT+AGG | + | chr4.1:41050416-41050435 | None:intergenic | 55.0% | |
| ACAAAGCGATCGGCCTGTGT+TGG | + | chr4.1:41052848-41052867 | None:intergenic | 55.0% | |
| ACAGGCCGATCGCTTTGTGT+TGG | - | chr4.1:41052850-41052869 | MS.gene09137:intron | 55.0% | |
| ACGATGGAGCGAGTCTTACC+AGG | + | chr4.1:41052351-41052370 | None:intergenic | 55.0% | |
| ACGGCAATGGCCAACCTGAA+TGG | - | chr4.1:41052897-41052916 | MS.gene09137:intron | 55.0% | |
| AGACCCAACAGCACGTGCTT+CGG | + | chr4.1:41050369-41050388 | None:intergenic | 55.0% | |
| AGCTGTCATGGGATGCTTGG+TGG | + | chr4.1:41051384-41051403 | None:intergenic | 55.0% | |
| AGGAGGGTTCCCCAAATGCT+CGG | + | chr4.1:41051327-41051346 | None:intergenic | 55.0% | |
| ATCCCTCAGGCTTCACCTGA+AGG | - | chr4.1:41050341-41050360 | MS.gene09137:CDS | 55.0% | |
| CATGACAGCTGATGTCCCAG+CGG | - | chr4.1:41051394-41051413 | MS.gene09137:intron | 55.0% | |
| CCTACGCCGTTTCAGCTTCT+GGG | - | chr4.1:41049660-41049679 | MS.gene09137:intron | 55.0% | |
| CCTCACCTTCACACCAACAC+AGG | - | chr4.1:41052832-41052851 | MS.gene09137:intron | 55.0% | |
| CTCGCAGAAACCGAGAATGG+CGG | - | chr4.1:41052785-41052804 | MS.gene09137:intron | 55.0% | |
| CTGCTCTTGCCGAACCATTC+AGG | + | chr4.1:41052914-41052933 | None:intergenic | 55.0% | |
| GACCTTCAGGTGAAGCCTGA+GGG | + | chr4.1:41050346-41050365 | None:intergenic | 55.0% | |
| GATACCAAACTCCCCGTGGT+TGG | - | chr4.1:41052276-41052295 | MS.gene09137:CDS | 55.0% | |
| GATCGATACCAAACTCCCCG+TGG | - | chr4.1:41052272-41052291 | MS.gene09137:CDS | 55.0% | |
| GCTGGGACATCAGCTGTCAT+GGG | + | chr4.1:41051395-41051414 | None:intergenic | 55.0% | |
| GTACGGTTGAAGGCAATGGC+TGG | + | chr4.1:41052940-41052959 | None:intergenic | 55.0% | |
| TTCAATGTCCCCATGGCACC+TGG | - | chr4.1:41052330-41052349 | MS.gene09137:CDS | 55.0% | |
| TTTGAAGGAAAGGGTCCCCC+AGG | + | chr4.1:41051529-41051548 | None:intergenic | 55.0% | |
| ! | AGGTGCCATGGGGACATTGA+AGG | + | chr4.1:41052331-41052350 | None:intergenic | 55.0% |
| ! | ATCGGCCTGTGTTGGTGTGA+AGG | + | chr4.1:41052840-41052859 | None:intergenic | 55.0% |
| ! | CCTGTGTTGGTGTGAAGGTG+AGG | + | chr4.1:41052835-41052854 | None:intergenic | 55.0% |
| ! | CGAGTCTTACCAGGTGCCAT+GGG | + | chr4.1:41052342-41052361 | None:intergenic | 55.0% |
| ! | CGTGGTTCATGGGGCTTTTC+AGG | - | chr4.1:41051850-41051869 | MS.gene09137:CDS | 55.0% |
| ! | GAGTCTTACCAGGTGCCATG+GGG | + | chr4.1:41052341-41052360 | None:intergenic | 55.0% |
| ! | TGTCATGGGATGCTTGGTGG+TGG | + | chr4.1:41051381-41051400 | None:intergenic | 55.0% |
| !! | CCGTGGTTGGTGACCAGAAA+TGG | - | chr4.1:41052289-41052308 | MS.gene09137:CDS | 55.0% |
| !! | CTCCCTATGGAGGCACTGAT+CGG | + | chr4.1:41051450-41051469 | None:intergenic | 55.0% |
| !! | GGGTGGTCTTTTGATGGACG+TGG | - | chr4.1:41050305-41050324 | MS.gene09137:CDS | 55.0% |
| CATCGTAGAGAGCAGCCGCT+GGG | + | chr4.1:41051412-41051431 | None:intergenic | 60.0% | |
| CCCAGAAGCTGAAACGGCGT+AGG | + | chr4.1:41049663-41049682 | None:intergenic | 60.0% | |
| CGCTGGGACATCAGCTGTCA+TGG | + | chr4.1:41051396-41051415 | None:intergenic | 60.0% | |
| GAAAGGGTCCCCCAGGTGTT+TGG | + | chr4.1:41051522-41051541 | None:intergenic | 60.0% | |
| GACCCAACAGCACGTGCTTC+GGG | + | chr4.1:41050368-41050387 | None:intergenic | 60.0% | |
| GAGCAACCCCTGAGACACCA+AGG | + | chr4.1:41050420-41050439 | None:intergenic | 60.0% | |
| GCCTACGCCGTTTCAGCTTC+TGG | - | chr4.1:41049659-41049678 | MS.gene09137:intron | 60.0% | |
| GCGAGTCTTACCAGGTGCCA+TGG | + | chr4.1:41052343-41052362 | None:intergenic | 60.0% | |
| GGACCTTCAGGTGAAGCCTG+AGG | + | chr4.1:41050347-41050366 | None:intergenic | 60.0% | |
| GGAGGGTTCCCCAAATGCTC+GGG | + | chr4.1:41051326-41051345 | None:intergenic | 60.0% | |
| GTCACCAACCACGGGGAGTT+TGG | + | chr4.1:41052283-41052302 | None:intergenic | 60.0% | |
| TTCTTCCAGCTCACGGTGCC+AGG | - | chr4.1:41052387-41052406 | MS.gene09137:CDS | 60.0% | |
| ! | GTCCCGAAGCACGTGCTGTT+GGG | - | chr4.1:41050363-41050382 | MS.gene09137:CDS | 60.0% |
| ! | TCTTCCAGCTCACGGTGCCA+GGG | - | chr4.1:41052388-41052407 | MS.gene09137:CDS | 60.0% |
| GCACGTGCTTCGGGACCTTC+AGG | + | chr4.1:41050359-41050378 | None:intergenic | 65.0% | |
| GCATCGTAGAGAGCAGCCGC+TGG | + | chr4.1:41051413-41051432 | None:intergenic | 65.0% | |
| GGTCCCGAAGCACGTGCTGT+TGG | - | chr4.1:41050362-41050381 | MS.gene09137:CDS | 65.0% | |
| TGGCTGAGGCGACACGGCAA+TGG | - | chr4.1:41052884-41052903 | MS.gene09137:intron | 65.0% | |
| ACTTGCCACCAGGCAGGCCC+TGG | + | chr4.1:41052408-41052427 | None:intergenic | 70.0% | |
| CAGGCCCTGGCACCGTGAGC+TGG | + | chr4.1:41052395-41052414 | None:intergenic | 75.0% | |
| ! | TCACGGTGCCAGGGCCTGCC+TGG | - | chr4.1:41052397-41052416 | MS.gene09137:CDS | 75.0% |
| !! | CGGTGCCAGGGCCTGCCTGG+TGG | - | chr4.1:41052400-41052419 | MS.gene09137:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 41049345 | 41053335 | 41049345 | ID=MS.gene09137 |
| chr4.1 | mRNA | 41049345 | 41053335 | 41049345 | ID=MS.gene09137.t1;Parent=MS.gene09137 |
| chr4.1 | exon | 41052910 | 41053335 | 41052910 | ID=MS.gene09137.t1.exon1;Parent=MS.gene09137.t1 |
| chr4.1 | CDS | 41052910 | 41053335 | 41052910 | ID=cds.MS.gene09137.t1;Parent=MS.gene09137.t1 |
| chr4.1 | exon | 41052185 | 41052420 | 41052185 | ID=MS.gene09137.t1.exon2;Parent=MS.gene09137.t1 |
| chr4.1 | CDS | 41052185 | 41052420 | 41052185 | ID=cds.MS.gene09137.t1;Parent=MS.gene09137.t1 |
| chr4.1 | exon | 41051744 | 41051870 | 41051744 | ID=MS.gene09137.t1.exon3;Parent=MS.gene09137.t1 |
| chr4.1 | CDS | 41051744 | 41051870 | 41051744 | ID=cds.MS.gene09137.t1;Parent=MS.gene09137.t1 |
| chr4.1 | exon | 41050745 | 41050881 | 41050745 | ID=MS.gene09137.t1.exon4;Parent=MS.gene09137.t1 |
| chr4.1 | CDS | 41050745 | 41050881 | 41050745 | ID=cds.MS.gene09137.t1;Parent=MS.gene09137.t1 |
| chr4.1 | exon | 41050255 | 41050414 | 41050255 | ID=MS.gene09137.t1.exon5;Parent=MS.gene09137.t1 |
| chr4.1 | CDS | 41050255 | 41050414 | 41050255 | ID=cds.MS.gene09137.t1;Parent=MS.gene09137.t1 |
| chr4.1 | exon | 41049707 | 41049982 | 41049707 | ID=MS.gene09137.t1.exon6;Parent=MS.gene09137.t1 |
| chr4.1 | CDS | 41049707 | 41049982 | 41049707 | ID=cds.MS.gene09137.t1;Parent=MS.gene09137.t1 |
| chr4.1 | exon | 41049345 | 41049599 | 41049345 | ID=MS.gene09137.t1.exon7;Parent=MS.gene09137.t1 |
| chr4.1 | CDS | 41049345 | 41049599 | 41049345 | ID=cds.MS.gene09137.t1;Parent=MS.gene09137.t1 |
| Gene Sequence |
| Protein sequence |
