Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09178.t1 | XP_013455924.1 | 98.7 | 467 | 6 | 0 | 1 | 467 | 289 | 755 | 2.40E-263 | 917.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09178.t1 | Q42572 | 76.2 | 467 | 111 | 0 | 1 | 467 | 302 | 768 | 6.4e-212 | 738.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09178.t1 | A0A072UVT2 | 98.7 | 467 | 6 | 0 | 1 | 467 | 289 | 755 | 1.8e-263 | 917.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene09178 | 0.800015 | 1.76E-48 | -1.69E-46 |
| MS.gene049397 | MS.gene09178 | 0.813117 | 3.01E-51 | -1.69E-46 |
| MS.gene049989 | MS.gene09178 | 0.801321 | 9.52E-49 | -1.69E-46 |
| MS.gene05124 | MS.gene09178 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene051955 | MS.gene09178 | 0.802934 | 4.43E-49 | -1.69E-46 |
| MS.gene053173 | MS.gene09178 | 0.81893 | 1.52E-52 | -1.69E-46 |
| MS.gene053348 | MS.gene09178 | 0.845641 | 3.58E-59 | -1.69E-46 |
| MS.gene053416 | MS.gene09178 | 0.800286 | 1.55E-48 | -1.69E-46 |
| MS.gene054551 | MS.gene09178 | 0.816653 | 4.95E-52 | -1.69E-46 |
| MS.gene054552 | MS.gene09178 | 0.802657 | 5.06E-49 | -1.69E-46 |
| MS.gene054593 | MS.gene09178 | 0.819921 | 9.01E-53 | -1.69E-46 |
| MS.gene056041 | MS.gene09178 | 0.816914 | 4.33E-52 | -1.69E-46 |
| MS.gene05640 | MS.gene09178 | 0.826234 | 3.03E-54 | -1.69E-46 |
| MS.gene056526 | MS.gene09178 | 0.833305 | 5.76E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene09178 | 0.845108 | 4.99E-59 | -1.69E-46 |
| MS.gene058828 | MS.gene09178 | 0.816031 | 6.82E-52 | -1.69E-46 |
| MS.gene060473 | MS.gene09178 | 0.833943 | 3.99E-56 | -1.69E-46 |
| MS.gene060565 | MS.gene09178 | 0.828126 | 1.07E-54 | -1.69E-46 |
| MS.gene06093 | MS.gene09178 | 0.815865 | 7.43E-52 | -1.69E-46 |
| MS.gene061099 | MS.gene09178 | 0.802036 | 6.79E-49 | -1.69E-46 |
| MS.gene061260 | MS.gene09178 | 0.836958 | 6.90E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09178.t1 | MTR_4g057345 | 98.715 | 467 | 6 | 0 | 1 | 467 | 289 | 755 | 0.0 | 954 |
| MS.gene09178.t1 | MTR_4g057340 | 87.580 | 467 | 58 | 0 | 1 | 467 | 245 | 711 | 0.0 | 854 |
| MS.gene09178.t1 | MTR_8g468400 | 76.017 | 467 | 110 | 1 | 1 | 467 | 229 | 693 | 0.0 | 743 |
| MS.gene09178.t1 | MTR_7g082860 | 39.877 | 489 | 265 | 9 | 1 | 465 | 906 | 1389 | 4.07e-117 | 374 |
| MS.gene09178.t1 | MTR_7g082860 | 37.980 | 495 | 253 | 11 | 1 | 465 | 906 | 1376 | 1.31e-102 | 334 |
| MS.gene09178.t1 | MTR_7g082860 | 40.000 | 400 | 214 | 7 | 1 | 377 | 906 | 1302 | 2.38e-92 | 305 |
| MS.gene09178.t1 | MTR_7g082860 | 39.892 | 371 | 197 | 7 | 1 | 348 | 906 | 1273 | 1.00e-80 | 272 |
| MS.gene09178.t1 | MTR_7g082860 | 36.863 | 255 | 146 | 4 | 1 | 243 | 906 | 1157 | 6.78e-46 | 171 |
| MS.gene09178.t1 | MTR_2g038030 | 28.866 | 388 | 222 | 13 | 105 | 457 | 214 | 582 | 3.02e-34 | 137 |
| MS.gene09178.t1 | MTR_2g038030 | 28.866 | 388 | 222 | 13 | 105 | 457 | 214 | 582 | 3.83e-34 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09178.t1 | AT1G08130 | 76.231 | 467 | 111 | 0 | 1 | 467 | 302 | 768 | 0.0 | 770 |
| MS.gene09178.t1 | AT1G49250 | 68.062 | 454 | 143 | 1 | 14 | 467 | 184 | 635 | 0.0 | 660 |
| MS.gene09178.t1 | AT1G66730 | 39.220 | 487 | 272 | 8 | 1 | 465 | 892 | 1376 | 6.73e-111 | 357 |
| MS.gene09178.t1 | AT5G57160 | 25.462 | 487 | 278 | 19 | 10 | 457 | 145 | 585 | 1.28e-24 | 108 |
| MS.gene09178.t1 | AT5G57160 | 28.244 | 262 | 145 | 10 | 228 | 457 | 1 | 251 | 5.63e-15 | 78.2 |
Find 95 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGATTTGTTGTACCTTAA+TGG | 0.174924 | 4.3:-43696205 | MS.gene09178:CDS |
| TCAAAAGGAGACTGAATTTC+AGG | 0.197824 | 4.3:+43698245 | None:intergenic |
| TGAAATTCTAAATAAGTTTC+AGG | 0.202495 | 4.3:-43697863 | MS.gene09178:CDS |
| ACAGAGAATCCTTCCTTTCC+AGG | 0.271926 | 4.3:-43696509 | MS.gene09178:intron |
| GGAGTAAAATCACACTTCTT+TGG | 0.283745 | 4.3:+43697934 | None:intergenic |
| CCCACTGCAGCTCGGTAAAC+AGG | 0.304641 | 4.3:+43693830 | None:intergenic |
| ACCTCTTTCGACGAAGAATC+TGG | 0.312752 | 4.3:-43695657 | MS.gene09178:CDS |
| GAAACTGAAGAAAGATTATA+TGG | 0.336761 | 4.3:-43695122 | MS.gene09178:CDS |
| TTTCAAAGCATTTGTAAGAT+AGG | 0.347737 | 4.3:-43694731 | MS.gene09178:intron |
| GAAGAAGTGCTTGGCCATTA+AGG | 0.354488 | 4.3:+43696191 | None:intergenic |
| TATAAATGTTCACAGGAATC+TGG | 0.355908 | 4.3:-43698527 | None:intergenic |
| CACTCCTTACGTATGGTGTA+TGG | 0.357780 | 4.3:-43697963 | MS.gene09178:CDS |
| AGAGCCAGGGACCTTTGGTT+TGG | 0.369744 | 4.3:+43694545 | None:intergenic |
| TGTAGCTTTGAGTGACATAA+AGG | 0.375806 | 4.3:-43696248 | MS.gene09178:CDS |
| GAGCCAGGGACCTTTGGTTT+GGG | 0.389083 | 4.3:+43694546 | None:intergenic |
| TCACTAGATTTGGTACCTAT+TGG | 0.390041 | 4.3:-43695005 | MS.gene09178:CDS |
| TTCCAGACAAAATTGCGAAT+TGG | 0.396547 | 4.3:-43698341 | MS.gene09178:intron |
| TTACTCCTGGTGTTCCGGTT+GGG | 0.398083 | 4.3:-43697918 | MS.gene09178:CDS |
| GCCTGCTCAGGAGCTTTGTC+AGG | 0.402859 | 4.3:+43693619 | None:intergenic |
| TAATGGCCAAGCACTTCTTC+AGG | 0.406702 | 4.3:-43696188 | MS.gene09178:CDS |
| GGGCATAGTAGATTCTAATA+AGG | 0.411879 | 4.3:-43693810 | MS.gene09178:intron |
| ATATATAATCCGTTTGCTAC+AGG | 0.417845 | 4.3:-43698432 | MS.gene09178:intron |
| TATAGGGGACTCACTAGATT+TGG | 0.419918 | 4.3:-43695015 | MS.gene09178:CDS |
| CCTCCAAGCGGTCACTCAAC+TGG | 0.422032 | 4.3:-43695147 | MS.gene09178:CDS |
| TCAGACGAGGAGGCCTGCTC+AGG | 0.423980 | 4.3:+43693607 | None:intergenic |
| CAGATACATTTCTTAGAGAA+TGG | 0.426116 | 4.3:-43697710 | MS.gene09178:CDS |
| TTTACTCCTGGTGTTCCGGT+TGG | 0.439220 | 4.3:-43697919 | MS.gene09178:CDS |
| GTACCTATTGGTGCTTTCCA+TGG | 0.447882 | 4.3:-43694993 | MS.gene09178:CDS |
| GCCTGACAAAGCTCCTGAGC+AGG | 0.451547 | 4.3:-43693620 | MS.gene09178:CDS |
| ATGTTGTTGCTGCAGTTTCA+AGG | 0.451764 | 4.3:-43697634 | MS.gene09178:intron |
| ATTGGTGCTTTCCATGGTCG+TGG | 0.454967 | 4.3:-43694987 | MS.gene09178:CDS |
| TTCCCCGTCTAGTTCGAGTT+CGG | 0.467023 | 4.3:-43693642 | MS.gene09178:CDS |
| AGCTCGGTAAACAGGGCTAA+TGG | 0.467833 | 4.3:+43693838 | None:intergenic |
| CGACCATGGAAAGCACCAAT+AGG | 0.468385 | 4.3:+43694990 | None:intergenic |
| CCAGTTGAGTGACCGCTTGG+AGG | 0.476893 | 4.3:+43695147 | None:intergenic |
| GAAACTGCAGCAACAACATC+AGG | 0.477339 | 4.3:+43697638 | None:intergenic |
| CCCTGTTTACCGAGCTGCAG+TGG | 0.477713 | 4.3:-43693831 | MS.gene09178:CDS |
| CAACAAGAAGCGACTTTATG+TGG | 0.481176 | 4.3:+43698477 | None:intergenic |
| AATCAATCAATCCTGATGTA+TGG | 0.482280 | 4.3:-43694426 | MS.gene09178:CDS |
| TGATGTCTTGTAGGAGTGTA+TGG | 0.485043 | 4.3:-43694794 | MS.gene09178:intron |
| TTTGACAGCATAGGCCCAAC+CGG | 0.485180 | 4.3:+43697904 | None:intergenic |
| CAGCCAGTTGAGTGACCGCT+TGG | 0.486186 | 4.3:+43695144 | None:intergenic |
| GGTAAACAGGGCTAATGGTC+AGG | 0.487201 | 4.3:+43693843 | None:intergenic |
| CATGGTCGTGGGAAACGTAC+AGG | 0.493140 | 4.3:-43694975 | MS.gene09178:intron |
| AGGCCGAACTCGAACTAGAC+GGG | 0.497952 | 4.3:+43693639 | None:intergenic |
| AATTAACTTACCTCTTCAAA+AGG | 0.498329 | 4.3:+43698230 | None:intergenic |
| TCCAGATTCTTCGTCGAAAG+AGG | 0.501881 | 4.3:+43695656 | None:intergenic |
| AGCAAACGGATTATATATAG+AGG | 0.513938 | 4.3:+43698437 | None:intergenic |
| CTCGCATCAAACCATACATC+AGG | 0.515232 | 4.3:+43694415 | None:intergenic |
| CAAACTCTCTTAGCTGCCTT+AGG | 0.516969 | 4.3:-43698308 | MS.gene09178:CDS |
| CTTCAGTGTACACAGCAGCT+TGG | 0.521080 | 4.3:+43698285 | None:intergenic |
| TAGAATTTCAGATACACCCT+TGG | 0.523022 | 4.3:+43697876 | None:intergenic |
| GCAGGCCTCCTCGTCTGAGC+AGG | 0.524759 | 4.3:-43693602 | None:intergenic |
| ATGCAACAAGTTCACAATCA+AGG | 0.533772 | 4.3:+43696545 | None:intergenic |
| CCGCTTGGAGGGTTCATATG+TGG | 0.534655 | 4.3:+43695159 | None:intergenic |
| GGCAGCTAAGAGAGTTTGCT+CGG | 0.535405 | 4.3:+43698313 | None:intergenic |
| TTTCAGACATACTATAAATG+TGG | 0.536516 | 4.3:-43694451 | MS.gene09178:intron |
| ACTCCTTACGTATGGTGTAT+GGG | 0.537597 | 4.3:-43697962 | MS.gene09178:CDS |
| AGAAATGCTGAACGGAACAC+TGG | 0.537995 | 4.3:-43697668 | MS.gene09178:CDS |
| TAAAAGGTGTTACCTCTCTA+CGG | 0.544535 | 4.3:+43696152 | None:intergenic |
| TTCTTTCGTTTAGGTGTGGG+AGG | 0.544797 | 4.3:-43693879 | MS.gene09178:intron |
| ATACGATGGAGAGCGTGCTC+AGG | 0.551459 | 4.3:-43697815 | MS.gene09178:intron |
| AACAACATCAAATGATGTTG+AGG | 0.552524 | 4.3:-43695613 | MS.gene09178:CDS |
| CAGTTGAGTGACCGCTTGGA+GGG | 0.554490 | 4.3:+43695148 | None:intergenic |
| GAATTGCAACCTGTAGCAAA+CGG | 0.557122 | 4.3:+43698423 | None:intergenic |
| ATAGGCCCAACCGGAACACC+AGG | 0.558999 | 4.3:+43697913 | None:intergenic |
| GTACACAGCAGCTTGGCCTA+AGG | 0.560199 | 4.3:+43698292 | None:intergenic |
| ATGAGATTACCTGGAAAGGA+AGG | 0.560383 | 4.3:+43696500 | None:intergenic |
| GGAGACTGAATTTCAGGAGG+CGG | 0.562772 | 4.3:+43698251 | None:intergenic |
| TTGGTGCTTTCCATGGTCGT+GGG | 0.568717 | 4.3:-43694986 | MS.gene09178:CDS |
| CCTGTTTACCGAGCTGCAGT+GGG | 0.571614 | 4.3:-43693830 | MS.gene09178:CDS |
| TTGACAAAGCCATTGATGCA+AGG | 0.578584 | 4.3:-43695575 | MS.gene09178:intron |
| GGCAATGAGATTACCTGGAA+AGG | 0.580861 | 4.3:+43696496 | None:intergenic |
| TGGGAATCACTTTAGAGCGA+AGG | 0.581370 | 4.3:+43694565 | None:intergenic |
| GGCTCTACTTTGCAGTATAG+GGG | 0.588353 | 4.3:-43695030 | MS.gene09178:intron |
| GTGTCTGCACTCCTTACGTA+TGG | 0.590991 | 4.3:-43697970 | MS.gene09178:CDS |
| GAAATGCTGAACGGAACACT+GGG | 0.591346 | 4.3:-43697667 | MS.gene09178:CDS |
| CAGGCCGAACTCGAACTAGA+CGG | 0.602214 | 4.3:+43693638 | None:intergenic |
| CCACTGCAGCTCGGTAAACA+GGG | 0.610534 | 4.3:+43693831 | None:intergenic |
| CTGTACGTTTCCCACGACCA+TGG | 0.615287 | 4.3:+43694976 | None:intergenic |
| TATGCTGTCAAAAGCAACCA+AGG | 0.619881 | 4.3:-43697893 | MS.gene09178:CDS |
| TATCGTTGTCATAGCACGCA+AGG | 0.623901 | 4.3:+43694762 | None:intergenic |
| GTTCCCATACACCATACGTA+AGG | 0.625733 | 4.3:+43697959 | None:intergenic |
| CTACTATGCCCACTGCAGCT+CGG | 0.628696 | 4.3:+43693822 | None:intergenic |
| TAAAGTGATTCCCAAACCAA+AGG | 0.638299 | 4.3:-43694556 | MS.gene09178:intron |
| AAACTTGAAAATCCGTAGAG+AGG | 0.640219 | 4.3:-43696164 | MS.gene09178:intron |
| AAAGGAGACTGAATTTCAGG+AGG | 0.653188 | 4.3:+43698248 | None:intergenic |
| GTACTTTACCTGCTCAGACG+AGG | 0.665242 | 4.3:+43693594 | None:intergenic |
| ATGCTGTCAAAAGCAACCAA+GGG | 0.671976 | 4.3:-43697892 | MS.gene09178:CDS |
| GGCCGAACTCGAACTAGACG+GGG | 0.685841 | 4.3:+43693640 | None:intergenic |
| ACGTGTGAATACAAATACGA+TGG | 0.698464 | 4.3:-43697829 | MS.gene09178:CDS |
| CCACATATGAACCCTCCAAG+CGG | 0.704525 | 4.3:-43695159 | MS.gene09178:CDS |
| CTTTACCTGCTCAGACGAGG+AGG | 0.708129 | 4.3:+43693597 | None:intergenic |
| TGTATGGTTTGATGCGAGTG+AGG | 0.711100 | 4.3:-43694410 | MS.gene09178:intron |
| TTTACAGTAGAAATGCTGAA+CGG | 0.714187 | 4.3:-43697676 | MS.gene09178:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAAGAAAAATGTATA+TGG | - | chr4.3:43695067-43695086 | MS.gene09178:intron | 10.0% |
| !! | TTAAAAATGATAACAAAAAT+AGG | + | chr4.3:43697199-43697218 | None:intergenic | 10.0% |
| !!! | AATTTTATAGGATAATATTA+GGG | + | chr4.3:43698167-43698186 | None:intergenic | 10.0% |
| !! | AATGGAGAAAAAATAATATT+CGG | - | chr4.3:43694851-43694870 | MS.gene09178:intron | 15.0% |
| !! | AGATAGAAATTTCATTATTT+CGG | - | chr4.3:43696623-43696642 | MS.gene09178:intron | 15.0% |
| !! | ATAAAAGGATTAACTTAATT+TGG | - | chr4.3:43698352-43698371 | MS.gene09178:intron | 15.0% |
| !! | ATGATAAAATAATACAGATA+TGG | - | chr4.3:43694875-43694894 | MS.gene09178:intron | 15.0% |
| !! | TAAACAAAAAAAAAATGAGA+TGG | + | chr4.3:43697755-43697774 | None:intergenic | 15.0% |
| !! | TATACTAAATTAAGTAGAAA+TGG | + | chr4.3:43696732-43696751 | None:intergenic | 15.0% |
| !!! | AAATTTGAATTGATGATAAA+AGG | - | chr4.3:43698337-43698356 | MS.gene09178:CDS | 15.0% |
| !!! | AACAAAATTATTGAAGTTTT+AGG | - | chr4.3:43694608-43694627 | MS.gene09178:CDS | 15.0% |
| !!! | AAGTTAATTTTATTGAAGTA+GGG | - | chr4.3:43693899-43693918 | MS.gene09178:intron | 15.0% |
| !!! | ACAAAATTATTGAAGTTTTA+GGG | - | chr4.3:43694609-43694628 | MS.gene09178:CDS | 15.0% |
| !!! | ATCCAAAAAAATTATTTTAC+AGG | - | chr4.3:43698092-43698111 | MS.gene09178:intron | 15.0% |
| !!! | ATTCAAAAAAAAGATTTTAC+AGG | + | chr4.3:43697843-43697862 | None:intergenic | 15.0% |
| !!! | CAATTTTATAGGATAATATT+AGG | + | chr4.3:43698168-43698187 | None:intergenic | 15.0% |
| !!! | TAAGTTAATTTTATTGAAGT+AGG | - | chr4.3:43693898-43693917 | MS.gene09178:intron | 15.0% |
| !!! | TCCAAAAAAATTATTTTACA+GGG | - | chr4.3:43698093-43698112 | MS.gene09178:intron | 15.0% |
| !!! | TCTTTTCTTTTTTATTTTGA+GGG | - | chr4.3:43696291-43696310 | MS.gene09178:intron | 15.0% |
| !!! | TTCAAAAAAAAGATTTTACA+GGG | + | chr4.3:43697842-43697861 | None:intergenic | 15.0% |
| !!! | TTTTGTATTTTCTGAATAAA+GGG | - | chr4.3:43698436-43698455 | MS.gene09178:CDS | 15.0% |
| !! | AAAGATTATATGGAAAAGTA+AGG | - | chr4.3:43697003-43697022 | MS.gene09178:intron | 20.0% |
| !! | AAGATTATATGGAAAAGTAA+GGG | - | chr4.3:43697004-43697023 | MS.gene09178:intron | 20.0% |
| !! | AATTTATACATTTAACTCAG+TGG | - | chr4.3:43697278-43697297 | MS.gene09178:intron | 20.0% |
| !! | ATATAACATACTCTTTAATG+TGG | - | chr4.3:43697168-43697187 | MS.gene09178:intron | 20.0% |
| !! | ATGTGTTTGCATTTATTTAT+CGG | - | chr4.3:43697064-43697083 | MS.gene09178:intron | 20.0% |
| !! | ATTATTATCTTCTTTCGTTT+AGG | - | chr4.3:43698227-43698246 | MS.gene09178:intron | 20.0% |
| !! | CAAAAAATCTTCAAATTTCA+AGG | + | chr4.3:43697871-43697890 | None:intergenic | 20.0% |
| !! | TATAGAGAAAAGGAAAATAT+TGG | + | chr4.3:43694039-43694058 | None:intergenic | 20.0% |
| !! | TGAAATTCTAAATAAGTTTC+AGG | - | chr4.3:43694252-43694271 | MS.gene09178:intron | 20.0% |
| !! | TTAACCTTTCAATTAGAATA+GGG | - | chr4.3:43694633-43694652 | MS.gene09178:intron | 20.0% |
| !! | TTGGGATAAATGTATATTAA+GGG | - | chr4.3:43695146-43695165 | MS.gene09178:CDS | 20.0% |
| !! | TTTAACCTTTCAATTAGAAT+AGG | - | chr4.3:43694632-43694651 | MS.gene09178:intron | 20.0% |
| !!! | AAATACAAATTCAAGTTGTT+CGG | + | chr4.3:43694584-43694603 | None:intergenic | 20.0% |
| !!! | ATTTGAAGATTTTTTGGTTT+TGG | - | chr4.3:43697875-43697894 | MS.gene09178:CDS | 20.0% |
| !!! | CAAAAAAATTATTTTACAGG+GGG | - | chr4.3:43698095-43698114 | MS.gene09178:intron | 20.0% |
| !!! | CCAAAAAAATTATTTTACAG+GGG | - | chr4.3:43698094-43698113 | MS.gene09178:intron | 20.0% |
| !!! | CTTGAAATTTGAAGATTTTT+TGG | - | chr4.3:43697869-43697888 | MS.gene09178:CDS | 20.0% |
| !!! | CTTTTGTATTTTCTGAATAA+AGG | - | chr4.3:43698435-43698454 | MS.gene09178:CDS | 20.0% |
| !!! | GTCTTTTCTTTTTTATTTTG+AGG | - | chr4.3:43696290-43696309 | MS.gene09178:intron | 20.0% |
| !!! | TAAGCATAATGCAATTTTAT+AGG | + | chr4.3:43698179-43698198 | None:intergenic | 20.0% |
| !!! | TCAAAAAAAAGATTTTACAG+GGG | + | chr4.3:43697841-43697860 | None:intergenic | 20.0% |
| !!! | TGCTATACAAATAATTTTGT+GGG | - | chr4.3:43693718-43693737 | MS.gene09178:intron | 20.0% |
| !!! | TTATAGTATGTCTGAAATAA+AGG | + | chr4.3:43697661-43697680 | None:intergenic | 20.0% |
| !!! | TTTGGGATAAATGTATATTA+AGG | - | chr4.3:43695145-43695164 | MS.gene09178:CDS | 20.0% |
| ! | AAAAAAAAACCTTGCATCAA+TGG | + | chr4.3:43696552-43696571 | None:intergenic | 25.0% |
| ! | AAAGAGGAATTAAAGTAGAT+AGG | - | chr4.3:43696156-43696175 | MS.gene09178:intron | 25.0% |
| ! | AAATGTATATTAAGGGTGAT+TGG | - | chr4.3:43695153-43695172 | MS.gene09178:CDS | 25.0% |
| ! | AAATTCTATTTGAAAGCAAC+TGG | + | chr4.3:43695480-43695499 | None:intergenic | 25.0% |
| ! | AATTAACTTACCTCTTCAAA+AGG | + | chr4.3:43693888-43693907 | None:intergenic | 25.0% |
| ! | ACAGTAAAAAATCGAAGATA+TGG | + | chr4.3:43698022-43698041 | None:intergenic | 25.0% |
| ! | ACTTCACTATGTTAATTACT+TGG | - | chr4.3:43693744-43693763 | MS.gene09178:intron | 25.0% |
| ! | ATTATTGTATATCATGCATC+TGG | - | chr4.3:43696361-43696380 | MS.gene09178:intron | 25.0% |
| ! | ATTTCAACTACATCTGAATA+TGG | - | chr4.3:43697225-43697244 | MS.gene09178:intron | 25.0% |
| ! | CTTGTAATTTGAGCAAATTT+CGG | - | chr4.3:43697952-43697971 | MS.gene09178:CDS | 25.0% |
| ! | GAAACTGAAGAAAGATTATA+TGG | - | chr4.3:43696993-43697012 | MS.gene09178:intron | 25.0% |
| ! | GTCAAAAACATATAGAGAAA+AGG | + | chr4.3:43694049-43694068 | None:intergenic | 25.0% |
| ! | GTTTCGACAAACTATATATA+AGG | - | chr4.3:43694917-43694936 | MS.gene09178:intron | 25.0% |
| ! | TAATCAGTAGTCCTATAATT+AGG | + | chr4.3:43695441-43695460 | None:intergenic | 25.0% |
| ! | TCAAACACAATATCAGAAAT+TGG | + | chr4.3:43695779-43695798 | None:intergenic | 25.0% |
| ! | TTCAGATGTAGTTGAAATAT+CGG | + | chr4.3:43697223-43697242 | None:intergenic | 25.0% |
| ! | TTTACTGTCAAAATTCATGA+AGG | - | chr4.3:43698034-43698053 | MS.gene09178:intron | 25.0% |
| ! | TTTAGAAATCAATCGTAAAG+AGG | - | chr4.3:43694943-43694962 | MS.gene09178:intron | 25.0% |
| ! | TTTCAGACATACTATAAATG+TGG | - | chr4.3:43697664-43697683 | MS.gene09178:CDS | 25.0% |
| !! | AAATTTGCTCAAATTAACAG+GGG | + | chr4.3:43697985-43698004 | None:intergenic | 25.0% |
| !! | AAATTTGCTCAAATTACAAG+CGG | + | chr4.3:43697952-43697971 | None:intergenic | 25.0% |
| !! | CAAAAAAAAGATTTTACAGG+GGG | + | chr4.3:43697840-43697859 | None:intergenic | 25.0% |
| !! | CATAAGCATTATGTTTCTAA+TGG | + | chr4.3:43694348-43694367 | None:intergenic | 25.0% |
| !! | CTAAATTTGCTCAAATTACA+GGG | + | chr4.3:43697922-43697941 | None:intergenic | 25.0% |
| !! | CTGCTATACAAATAATTTTG+TGG | - | chr4.3:43693717-43693736 | MS.gene09178:intron | 25.0% |
| !! | CTGTTAATTTGAGCAAATTT+CGG | - | chr4.3:43697985-43698004 | MS.gene09178:CDS | 25.0% |
| !! | GAAATTTGCTCAAATTAACA+GGG | + | chr4.3:43697986-43698005 | None:intergenic | 25.0% |
| !! | GATATTAGAGTTTCAGATTT+TGG | - | chr4.3:43695226-43695245 | MS.gene09178:intron | 25.0% |
| !! | TAAATTTGCTCAAATTACAG+GGG | + | chr4.3:43697921-43697940 | None:intergenic | 25.0% |
| !! | TTTCAAAGCATTTGTAAGAT+AGG | - | chr4.3:43697384-43697403 | MS.gene09178:intron | 25.0% |
| !!! | AATTTGAAGATTTCTGGTTT+TGG | + | chr4.3:43698061-43698080 | None:intergenic | 25.0% |
| !!! | ATAGTATAAATGAAGCATTG+AGG | - | chr4.3:43696215-43696234 | MS.gene09178:CDS | 25.0% |
| !!! | CCCCTGTAAAATAATTTTTT+TGG | + | chr4.3:43698097-43698116 | None:intergenic | 25.0% |
| !!! | TAGCTTTTAACTTCTATTGA+TGG | - | chr4.3:43698410-43698429 | MS.gene09178:intron | 25.0% |
| !!! | TTATTTTTTCTCCATTTGCA+AGG | + | chr4.3:43694847-43694866 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTCATTTTGCATC+AGG | - | chr4.3:43694069-43694088 | MS.gene09178:intron | 25.0% |
| AAAAAATCGAAGATATGGCA+GGG | + | chr4.3:43698017-43698036 | None:intergenic | 30.0% | |
| AAAATGACCTATATTACAGG+GGG | - | chr4.3:43698126-43698145 | MS.gene09178:intron | 30.0% | |
| AAAGCCCTATTCTAATTGAA+AGG | + | chr4.3:43694640-43694659 | None:intergenic | 30.0% | |
| AACAACATCAAATGATGTTG+AGG | - | chr4.3:43696502-43696521 | MS.gene09178:intron | 30.0% | |
| AAGTATAAGTGAGAAGCTAT+TGG | + | chr4.3:43697470-43697489 | None:intergenic | 30.0% | |
| AATCAATCAATCCTGATGTA+TGG | - | chr4.3:43697689-43697708 | MS.gene09178:CDS | 30.0% | |
| ACTTATACTTCATGTTATGG+TGG | - | chr4.3:43697480-43697499 | MS.gene09178:intron | 30.0% | |
| AGATTCCGAATCCTAATTAT+AGG | - | chr4.3:43695427-43695446 | MS.gene09178:intron | 30.0% | |
| ATTAGCAACGCAAAGATAAA+AGG | + | chr4.3:43695982-43696001 | None:intergenic | 30.0% | |
| ATTGCAAGAGAAACCAAATT+TGG | + | chr4.3:43696844-43696863 | None:intergenic | 30.0% | |
| CAACTGAAAATCAAGAGATA+AGG | + | chr4.3:43696901-43696920 | None:intergenic | 30.0% | |
| CAAGAACTTTATTATCCCAT+GGG | - | chr4.3:43696263-43696282 | MS.gene09178:CDS | 30.0% | |
| CAGATACATTTCTTAGAGAA+TGG | - | chr4.3:43694405-43694424 | MS.gene09178:intron | 30.0% | |
| CAGTAGAAAACAGATTCAAT+CGG | + | chr4.3:43696324-43696343 | None:intergenic | 30.0% | |
| CCAGAAATCTTCAAATTACA+AGG | - | chr4.3:43698064-43698083 | MS.gene09178:intron | 30.0% | |
| CCTGTAATTTGAGCAAATTT+AGG | - | chr4.3:43697920-43697939 | MS.gene09178:CDS | 30.0% | |
| CCTTGTAATTTGAAGATTTC+TGG | + | chr4.3:43698067-43698086 | None:intergenic | 30.0% | |
| CGAAAATGACCTATATTACA+GGG | - | chr4.3:43698124-43698143 | MS.gene09178:intron | 30.0% | |
| CTCACTTATACTTCATGTTA+TGG | - | chr4.3:43697477-43697496 | MS.gene09178:intron | 30.0% | |
| CTTATACTTCATGTTATGGT+GGG | - | chr4.3:43697481-43697500 | MS.gene09178:intron | 30.0% | |
| GAAAATGACCTATATTACAG+GGG | - | chr4.3:43698125-43698144 | MS.gene09178:intron | 30.0% | |
| GAATTAAAGTAGATAGGTCA+AGG | - | chr4.3:43696162-43696181 | MS.gene09178:intron | 30.0% | |
| GATGAGATTTAATGATCCAA+CGG | + | chr4.3:43694716-43694735 | None:intergenic | 30.0% | |
| GTAGTCCTATAATTAGGATT+CGG | + | chr4.3:43695435-43695454 | None:intergenic | 30.0% | |
| GTGACAAAGACAGATAATAT+AGG | - | chr4.3:43695269-43695288 | MS.gene09178:intron | 30.0% | |
| GTTCGGAAAATGTTCATAAT+TGG | + | chr4.3:43694567-43694586 | None:intergenic | 30.0% | |
| TAAAAAATCGAAGATATGGC+AGG | + | chr4.3:43698018-43698037 | None:intergenic | 30.0% | |
| TAAAACAACAGAGACATTAG+TGG | + | chr4.3:43695734-43695753 | None:intergenic | 30.0% | |
| TAATAACCTTACATCTTGAC+AGG | - | chr4.3:43695819-43695838 | MS.gene09178:intron | 30.0% | |
| TCAGATGTAGTTGAAATATC+GGG | + | chr4.3:43697222-43697241 | None:intergenic | 30.0% | |
| TTATTTCGGCTGTAGTTATA+TGG | - | chr4.3:43696637-43696656 | MS.gene09178:intron | 30.0% | |
| TTTACAGTAGAAATGCTGAA+CGG | - | chr4.3:43694439-43694458 | MS.gene09178:CDS | 30.0% | |
| TTTAGTCCTTTCGATGTAAA+GGG | - | chr4.3:43695327-43695346 | MS.gene09178:intron | 30.0% | |
| TTTGCCACACGTAAAAATAA+AGG | + | chr4.3:43695648-43695667 | None:intergenic | 30.0% | |
| ! | AAATTTGCTCAAATTACAGG+GGG | + | chr4.3:43697920-43697939 | None:intergenic | 30.0% |
| ! | AATTTGCTCAAATTAACAGG+GGG | + | chr4.3:43697984-43698003 | None:intergenic | 30.0% |
| ! | AATTTGCTCAAATTACAAGC+GGG | + | chr4.3:43697951-43697970 | None:intergenic | 30.0% |
| ! | ATATATAATCCGTTTGCTAC+AGG | - | chr4.3:43693683-43693702 | MS.gene09178:intron | 30.0% |
| ! | CCTAAATTTGCTCAAATTAC+AGG | + | chr4.3:43697923-43697942 | None:intergenic | 30.0% |
| ! | CGAAATTTGCTCAAATTAAC+AGG | + | chr4.3:43697987-43698006 | None:intergenic | 30.0% |
| ! | GACACAATTTTGTCATAATC+AGG | + | chr4.3:43694130-43694149 | None:intergenic | 30.0% |
| ! | GGTAGAAGTTTAGAATAAAG+AGG | - | chr4.3:43696140-43696159 | MS.gene09178:intron | 30.0% |
| ! | TTTTATTGAAGTAGGGTGAA+TGG | - | chr4.3:43693906-43693925 | MS.gene09178:intron | 30.0% |
| !! | AGCAAACGGATTATATATAG+AGG | + | chr4.3:43693681-43693700 | None:intergenic | 30.0% |
| !! | CCTGTAATATAGGTCATTTT+CGG | + | chr4.3:43698126-43698145 | None:intergenic | 30.0% |
| !! | GAGGAAATAGTATTTTTGAG+AGG | - | chr4.3:43696234-43696253 | MS.gene09178:CDS | 30.0% |
| !! | GTGCTTTGTTTAAAACCTTT+CGG | - | chr4.3:43693935-43693954 | MS.gene09178:intron | 30.0% |
| !! | TGCTTTGTTTAAAACCTTTC+GGG | - | chr4.3:43693936-43693955 | MS.gene09178:intron | 30.0% |
| !! | TTCGATTTGTTGTACCTTAA+TGG | - | chr4.3:43695910-43695929 | MS.gene09178:intron | 30.0% |
| !! | TTTCAGATTTTGGAGAAACT+TGG | - | chr4.3:43695236-43695255 | MS.gene09178:intron | 30.0% |
| !!! | CTCTGTTGTTTTACCTTTAT+TGG | - | chr4.3:43695741-43695760 | MS.gene09178:intron | 30.0% |
| !!! | TTTTTTATTTTGAGGGAAGC+AGG | - | chr4.3:43696298-43696317 | MS.gene09178:intron | 30.0% |
| AAAAATCGAAGATATGGCAG+GGG | + | chr4.3:43698016-43698035 | None:intergenic | 35.0% | |
| AAAAGAAAAGACTCTTCCCA+TGG | + | chr4.3:43696282-43696301 | None:intergenic | 35.0% | |
| AAACTTGAAAATCCGTAGAG+AGG | - | chr4.3:43695951-43695970 | MS.gene09178:intron | 35.0% | |
| AAAGAAAAGACTCTTCCCAT+GGG | + | chr4.3:43696281-43696300 | None:intergenic | 35.0% | |
| AAATGACCTATATTACAGGG+GGG | - | chr4.3:43698127-43698146 | MS.gene09178:intron | 35.0% | |
| AACTACATCTGAATATGGCT+AGG | - | chr4.3:43697230-43697249 | MS.gene09178:intron | 35.0% | |
| AAGTCAACTCAGACTAAAAG+AGG | - | chr4.3:43695110-43695129 | MS.gene09178:intron | 35.0% | |
| AATATAAGAGGAGCTGTGTT+AGG | - | chr4.3:43696119-43696138 | MS.gene09178:intron | 35.0% | |
| ACGTGTGAATACAAATACGA+TGG | - | chr4.3:43694286-43694305 | MS.gene09178:intron | 35.0% | |
| AGTCAACTCAGACTAAAAGA+GGG | - | chr4.3:43695111-43695130 | MS.gene09178:intron | 35.0% | |
| AGTTGAATCCATGATAGAGT+TGG | - | chr4.3:43696030-43696049 | MS.gene09178:intron | 35.0% | |
| ATCAACTACACAATGTGAAC+AGG | + | chr4.3:43698385-43698404 | None:intergenic | 35.0% | |
| ATCTTCTTTCGTTTAGGTGT+GGG | - | chr4.3:43698233-43698252 | MS.gene09178:intron | 35.0% | |
| ATGCAACAAGTTCACAATCA+AGG | + | chr4.3:43695573-43695592 | None:intergenic | 35.0% | |
| ATTTGCTCAAATTAACAGGG+GGG | + | chr4.3:43697983-43698002 | None:intergenic | 35.0% | |
| ATTTGCTCAAATTACAAGCG+GGG | + | chr4.3:43697950-43697969 | None:intergenic | 35.0% | |
| CACACGTAAAAATAAAGGAC+CGG | + | chr4.3:43695643-43695662 | None:intergenic | 35.0% | |
| CCGAAAATGACCTATATTAC+AGG | - | chr4.3:43698123-43698142 | MS.gene09178:intron | 35.0% | |
| CTTTAGTCCTTTCGATGTAA+AGG | - | chr4.3:43695326-43695345 | MS.gene09178:intron | 35.0% | |
| GAAAGCTGAATCACCAATAA+AGG | + | chr4.3:43695757-43695776 | None:intergenic | 35.0% | |
| GCAAGAACTTTATTATCCCA+TGG | - | chr4.3:43696262-43696281 | MS.gene09178:CDS | 35.0% | |
| GCTTAATGAGCTTTGCTTTA+AGG | + | chr4.3:43695047-43695066 | None:intergenic | 35.0% | |
| GGAGTAAAATCACACTTCTT+TGG | + | chr4.3:43694184-43694203 | None:intergenic | 35.0% | |
| GGGATAATAAAGTTCTTGCT+TGG | + | chr4.3:43696261-43696280 | None:intergenic | 35.0% | |
| GGGCATAGTAGATTCTAATA+AGG | - | chr4.3:43698305-43698324 | MS.gene09178:CDS | 35.0% | |
| GTGTCAATGCATTATGATGT+TGG | - | chr4.3:43694005-43694024 | MS.gene09178:intron | 35.0% | |
| TAAAGTGATTCCCAAACCAA+AGG | - | chr4.3:43697559-43697578 | MS.gene09178:intron | 35.0% | |
| TACTAAGCAGAACTCAGAAA+TGG | + | chr4.3:43697613-43697632 | None:intergenic | 35.0% | |
| TACTGTCCACGAAATATAAG+AGG | - | chr4.3:43696107-43696126 | MS.gene09178:intron | 35.0% | |
| TAGAATTTCAGATACACCCT+TGG | + | chr4.3:43694242-43694261 | None:intergenic | 35.0% | |
| TAGAGATGCTGCAGAAAATT+AGG | + | chr4.3:43696437-43696456 | None:intergenic | 35.0% | |
| TATCTTCTTTCGTTTAGGTG+TGG | - | chr4.3:43698232-43698251 | MS.gene09178:intron | 35.0% | |
| TCAAAAGGAGACTGAATTTC+AGG | + | chr4.3:43693873-43693892 | None:intergenic | 35.0% | |
| TTAGTGACATGATGTCTTGT+AGG | - | chr4.3:43697312-43697331 | MS.gene09178:intron | 35.0% | |
| TTCCAGACAAAATTGCGAAT+TGG | - | chr4.3:43693774-43693793 | MS.gene09178:intron | 35.0% | |
| ! | ACTCAAAGCTACATTTTTGC+GGG | + | chr4.3:43695860-43695879 | None:intergenic | 35.0% |
| ! | ATCCAATTCGCAATTTTGTC+TGG | + | chr4.3:43693779-43693798 | None:intergenic | 35.0% |
| ! | ATGTCATTTCACCATACACA+AGG | + | chr4.3:43694798-43694817 | None:intergenic | 35.0% |
| ! | CACTCAAAGCTACATTTTTG+CGG | + | chr4.3:43695861-43695880 | None:intergenic | 35.0% |
| ! | CTCTTGATTTTCAGTTGTGA+GGG | - | chr4.3:43696904-43696923 | MS.gene09178:intron | 35.0% |
| ! | TCACTAGATTTGGTACCTAT+TGG | - | chr4.3:43697110-43697129 | MS.gene09178:intron | 35.0% |
| ! | TCTCTTGATTTTCAGTTGTG+AGG | - | chr4.3:43696903-43696922 | MS.gene09178:intron | 35.0% |
| !! | AAGAAGTGTGATTTTACTCC+TGG | - | chr4.3:43694184-43694203 | MS.gene09178:intron | 35.0% |
| !! | AATTCAGTCTCCTTTTGAAG+AGG | - | chr4.3:43693875-43693894 | MS.gene09178:intron | 35.0% |
| !! | ATTTGTTGTGAGTGACATGT+TGG | - | chr4.3:43695386-43695405 | MS.gene09178:intron | 35.0% |
| !! | TAAAAGGTGTTACCTCTCTA+CGG | + | chr4.3:43695966-43695985 | None:intergenic | 35.0% |
| !! | TAATGAGCTTTGCTTTAAGG+AGG | + | chr4.3:43695044-43695063 | None:intergenic | 35.0% |
| !! | TGTAGCTTTGAGTGACATAA+AGG | - | chr4.3:43695867-43695886 | MS.gene09178:intron | 35.0% |
| !!! | TTTTTGGTTTTGGACCTTCA+TGG | - | chr4.3:43697885-43697904 | MS.gene09178:CDS | 35.0% |
| AAAATCGAAGATATGGCAGG+GGG | + | chr4.3:43698015-43698034 | None:intergenic | 40.0% | |
| AAAGGAGACTGAATTTCAGG+AGG | + | chr4.3:43693870-43693889 | None:intergenic | 40.0% | |
| AAATGACCTATACTACAGGG+GGG | + | chr4.3:43697809-43697828 | None:intergenic | 40.0% | |
| ACAGAGACATTAGTGGCAAA+AGG | + | chr4.3:43695727-43695746 | None:intergenic | 40.0% | |
| ACAGCTCCTCTTATATTTCG+TGG | + | chr4.3:43696116-43696135 | None:intergenic | 40.0% | |
| ACTCACAGCTCTTCCAAATT+TGG | - | chr4.3:43696828-43696847 | MS.gene09178:intron | 40.0% | |
| ACTCCTTACGTATGGTGTAT+GGG | - | chr4.3:43694153-43694172 | MS.gene09178:intron | 40.0% | |
| AGAATGCAGAAGCTTCATCA+AGG | + | chr4.3:43696070-43696089 | None:intergenic | 40.0% | |
| AGGTCAAGGCAGTTAGTTAA+AGG | - | chr4.3:43696176-43696195 | MS.gene09178:CDS | 40.0% | |
| ATGAGATTACCTGGAAAGGA+AGG | + | chr4.3:43695618-43695637 | None:intergenic | 40.0% | |
| ATGCTGTCAAAAGCAACCAA+GGG | - | chr4.3:43694223-43694242 | MS.gene09178:intron | 40.0% | |
| ATGTTGTTGCTGCAGTTTCA+AGG | - | chr4.3:43694481-43694500 | MS.gene09178:intron | 40.0% | |
| CAACAAGAAGCGACTTTATG+TGG | + | chr4.3:43693641-43693660 | None:intergenic | 40.0% | |
| CAGCACAAAAAAATCTCCCA+AGG | + | chr4.3:43697256-43697275 | None:intergenic | 40.0% | |
| CCTGTAGTATAGGTCATTTC+CGG | - | chr4.3:43697810-43697829 | MS.gene09178:intron | 40.0% | |
| CGGAAATGACCTATACTACA+GGG | + | chr4.3:43697812-43697831 | None:intergenic | 40.0% | |
| GAAATGACCTATACTACAGG+GGG | + | chr4.3:43697810-43697829 | None:intergenic | 40.0% | |
| GAATTGCAACCTGTAGCAAA+CGG | + | chr4.3:43693695-43693714 | None:intergenic | 40.0% | |
| GAGATTTAATGATCCAACGG+TGG | + | chr4.3:43694713-43694732 | None:intergenic | 40.0% | |
| GATTGGAATTCATGAACGTC+TGG | - | chr4.3:43695170-43695189 | MS.gene09178:CDS | 40.0% | |
| GGAAATGACCTATACTACAG+GGG | + | chr4.3:43697811-43697830 | None:intergenic | 40.0% | |
| GGTAGAAACAACCTTGTGTA+TGG | - | chr4.3:43694784-43694803 | MS.gene09178:CDS | 40.0% | |
| GTGGAAAACAAGCTTATGCA+TGG | + | chr4.3:43694694-43694713 | None:intergenic | 40.0% | |
| TAAGCACCTGTCAAGATGTA+AGG | + | chr4.3:43695828-43695847 | None:intergenic | 40.0% | |
| TATAGGGGACTCACTAGATT+TGG | - | chr4.3:43697100-43697119 | MS.gene09178:intron | 40.0% | |
| TATGCTGTCAAAAGCAACCA+AGG | - | chr4.3:43694222-43694241 | MS.gene09178:intron | 40.0% | |
| TGAATCCATGATAGAGTTGG+CGG | - | chr4.3:43696033-43696052 | MS.gene09178:intron | 40.0% | |
| TTCGGCTGTAGTTATATGGT+GGG | - | chr4.3:43696641-43696660 | MS.gene09178:intron | 40.0% | |
| TTGACAAAGCCATTGATGCA+AGG | - | chr4.3:43696540-43696559 | MS.gene09178:CDS | 40.0% | |
| TTTCCAGGTAATCTCATTGC+CGG | - | chr4.3:43695621-43695640 | MS.gene09178:CDS | 40.0% | |
| TTTCCTCCCTTTACATCGAA+AGG | + | chr4.3:43695336-43695355 | None:intergenic | 40.0% | |
| TTTCGGCTGTAGTTATATGG+TGG | - | chr4.3:43696640-43696659 | MS.gene09178:intron | 40.0% | |
| TTTGCTCAAATTAACAGGGG+GGG | + | chr4.3:43697982-43698001 | None:intergenic | 40.0% | |
| ! | AGATTTTACAGGGGGAAAAC+CGG | + | chr4.3:43697832-43697851 | None:intergenic | 40.0% |
| ! | GTTTTACCCCCCTGTAATAT+AGG | + | chr4.3:43698136-43698155 | None:intergenic | 40.0% |
| ! | TATCATGCATCTGGAATGAG+CGG | - | chr4.3:43696370-43696389 | MS.gene09178:intron | 40.0% |
| ! | TCAGCTCAATAAGTTGGAGA+CGG | - | chr4.3:43693963-43693982 | MS.gene09178:intron | 40.0% |
| ! | TGATGTCTTGTAGGAGTGTA+TGG | - | chr4.3:43697321-43697340 | MS.gene09178:intron | 40.0% |
| ! | TGATTTTACTCCTGGTGTTC+CGG | - | chr4.3:43694192-43694211 | MS.gene09178:intron | 40.0% |
| !! | ATAAGCTTGTTTTCCACCGT+TGG | - | chr4.3:43694697-43694716 | MS.gene09178:intron | 40.0% |
| !! | ATTTTGGAGAAACTTGGCAG+TGG | - | chr4.3:43695242-43695261 | MS.gene09178:intron | 40.0% |
| !! | CACAAGGTTGTTTCTACCAA+TGG | + | chr4.3:43694782-43694801 | None:intergenic | 40.0% |
| !! | GATATTTGCTGTCACTGAAC+AGG | - | chr4.3:43695518-43695537 | MS.gene09178:intron | 40.0% |
| !! | TACTTCATGTTATGGTGGGT+AGG | - | chr4.3:43697485-43697504 | MS.gene09178:intron | 40.0% |
| !!! | AGTTTTCCTGAAGAAGTGCT+TGG | + | chr4.3:43695936-43695955 | None:intergenic | 40.0% |
| !!! | CGGTCCTTTATTTTTACGTG+TGG | - | chr4.3:43695641-43695660 | MS.gene09178:CDS | 40.0% |
| !!! | TTGGTTGCTTTTGACAGCAT+AGG | + | chr4.3:43694223-43694242 | None:intergenic | 40.0% |
| AATGACCTATACTACAGGGG+GGG | + | chr4.3:43697808-43697827 | None:intergenic | 45.0% | |
| ACAGAGAATCCTTCCTTTCC+AGG | - | chr4.3:43695606-43695625 | MS.gene09178:CDS | 45.0% | |
| ACCAGGCTGCTCATAAGTTA+TGG | - | chr4.3:43696702-43696721 | MS.gene09178:intron | 45.0% | |
| ACCTCTTTCGACGAAGAATC+TGG | - | chr4.3:43696458-43696477 | MS.gene09178:intron | 45.0% | |
| AGAAATGCTGAACGGAACAC+TGG | - | chr4.3:43694447-43694466 | MS.gene09178:CDS | 45.0% | |
| AGCGAGAGTTGTTGATCCAT+TGG | - | chr4.3:43694763-43694782 | MS.gene09178:CDS | 45.0% | |
| AGTCCTTTCGATGTAAAGGG+AGG | - | chr4.3:43695330-43695349 | MS.gene09178:intron | 45.0% | |
| ATCTGAATATGGCTAGGCCT+TGG | - | chr4.3:43697236-43697255 | MS.gene09178:intron | 45.0% | |
| CAAACTCTCTTAGCTGCCTT+AGG | - | chr4.3:43693807-43693826 | MS.gene09178:intron | 45.0% | |
| CACTCCTTACGTATGGTGTA+TGG | - | chr4.3:43694152-43694171 | MS.gene09178:intron | 45.0% | |
| CAGGCTGCTCATAAGTTATG+GGG | - | chr4.3:43696704-43696723 | MS.gene09178:intron | 45.0% | |
| CATTTGCAAGGCCAAGTCTA+TGG | + | chr4.3:43694835-43694854 | None:intergenic | 45.0% | |
| CCAGGCTGCTCATAAGTTAT+GGG | - | chr4.3:43696703-43696722 | MS.gene09178:intron | 45.0% | |
| CCGGAAATGACCTATACTAC+AGG | + | chr4.3:43697813-43697832 | None:intergenic | 45.0% | |
| CGGCTCTACTTTGCAGTATA+GGG | - | chr4.3:43697084-43697103 | MS.gene09178:intron | 45.0% | |
| CTCGCATCAAACCATACATC+AGG | + | chr4.3:43697703-43697722 | None:intergenic | 45.0% | |
| GAAACTGCAGCAACAACATC+AGG | + | chr4.3:43694480-43694499 | None:intergenic | 45.0% | |
| GAAATGCTGAACGGAACACT+GGG | - | chr4.3:43694448-43694467 | MS.gene09178:CDS | 45.0% | |
| GGCAATGAGATTACCTGGAA+AGG | + | chr4.3:43695622-43695641 | None:intergenic | 45.0% | |
| GGCTCTACTTTGCAGTATAG+GGG | - | chr4.3:43697085-43697104 | MS.gene09178:intron | 45.0% | |
| GGTGCATCAGCTCAATAAGT+TGG | - | chr4.3:43693957-43693976 | MS.gene09178:intron | 45.0% | |
| GTTCCCATACACCATACGTA+AGG | + | chr4.3:43694159-43694178 | None:intergenic | 45.0% | |
| TAATGGCCAAGCACTTCTTC+AGG | - | chr4.3:43695927-43695946 | MS.gene09178:intron | 45.0% | |
| TATCGTTGTCATAGCACGCA+AGG | + | chr4.3:43697356-43697375 | None:intergenic | 45.0% | |
| TCCAGATTCTTCGTCGAAAG+AGG | + | chr4.3:43696462-43696481 | None:intergenic | 45.0% | |
| TCGGCTCTACTTTGCAGTAT+AGG | - | chr4.3:43697083-43697102 | MS.gene09178:intron | 45.0% | |
| TCTGAATATGGCTAGGCCTT+GGG | - | chr4.3:43697237-43697256 | MS.gene09178:intron | 45.0% | |
| TGTATGGTTTGATGCGAGTG+AGG | - | chr4.3:43697705-43697724 | MS.gene09178:CDS | 45.0% | |
| TTCTTTCGTTTAGGTGTGGG+AGG | - | chr4.3:43698236-43698255 | MS.gene09178:intron | 45.0% | |
| ! | GGGGGTGAAATTTTCCATGA+AGG | + | chr4.3:43697902-43697921 | None:intergenic | 45.0% |
| ! | GTACCTATTGGTGCTTTCCA+TGG | - | chr4.3:43697122-43697141 | MS.gene09178:intron | 45.0% |
| !! | ATATGGTGGGACCCCTTTTT+GGG | - | chr4.3:43696654-43696673 | MS.gene09178:intron | 45.0% |
| !! | ATGTTATGGTGGGTAGGAAC+TGG | - | chr4.3:43697491-43697510 | MS.gene09178:intron | 45.0% |
| !! | CATAGACTTGGCCTTGCAAA+TGG | - | chr4.3:43694833-43694852 | MS.gene09178:intron | 45.0% |
| !! | GAAGAAGTGCTTGGCCATTA+AGG | + | chr4.3:43695927-43695946 | None:intergenic | 45.0% |
| !! | TATATGGTGGGACCCCTTTT+TGG | - | chr4.3:43696653-43696672 | MS.gene09178:intron | 45.0% |
| !! | TGGGAATCACTTTAGAGCGA+AGG | + | chr4.3:43697553-43697572 | None:intergenic | 45.0% |
| !!! | TTTTTGTTTATTAATATTAT+GGG | - | chr4.3:43697765-43697784 | MS.gene09178:intron | 5.0% |
| !!! | TTTTTTGTTTATTAATATTA+TGG | - | chr4.3:43697764-43697783 | MS.gene09178:intron | 5.0% |
| AAACAAGAGCCAGGGACCTT+TGG | + | chr4.3:43697578-43697597 | None:intergenic | 50.0% | |
| AAGAGGGCAGACAGGCTATT+TGG | - | chr4.3:43695127-43695146 | MS.gene09178:CDS | 50.0% | |
| AGAGGGCAGACAGGCTATTT+GGG | - | chr4.3:43695128-43695147 | MS.gene09178:CDS | 50.0% | |
| AGCTCGGTAAACAGGGCTAA+TGG | + | chr4.3:43698280-43698299 | None:intergenic | 50.0% | |
| ATGACCTATACTACAGGGGG+GGG | + | chr4.3:43697807-43697826 | None:intergenic | 50.0% | |
| ATTCCCAAACCAAAGGTCCC+TGG | - | chr4.3:43697566-43697585 | MS.gene09178:intron | 50.0% | |
| ATTGAGCTGATGCACCCGAA+AGG | + | chr4.3:43693953-43693972 | None:intergenic | 50.0% | |
| CAGACTAAAAGAGGGCAGAC+AGG | - | chr4.3:43695119-43695138 | MS.gene09178:CDS | 50.0% | |
| CCACATATGAACCCTCCAAG+CGG | - | chr4.3:43696956-43696975 | MS.gene09178:intron | 50.0% | |
| CCATGATAGAGTTGGCGGAA+GGG | - | chr4.3:43696038-43696057 | MS.gene09178:intron | 50.0% | |
| CCCATAACTTATGAGCAGCC+TGG | + | chr4.3:43696706-43696725 | None:intergenic | 50.0% | |
| CTTCAGTGTACACAGCAGCT+TGG | + | chr4.3:43693833-43693852 | None:intergenic | 50.0% | |
| GCCAAGTCTATGGTGCACAA+GGG | + | chr4.3:43694825-43694844 | None:intergenic | 50.0% | |
| GGAGACTGAATTTCAGGAGG+CGG | + | chr4.3:43693867-43693886 | None:intergenic | 50.0% | |
| GGTAAACAGGGCTAATGGTC+AGG | + | chr4.3:43698275-43698294 | None:intergenic | 50.0% | |
| GTGTCTGCACTCCTTACGTA+TGG | - | chr4.3:43694145-43694164 | MS.gene09178:intron | 50.0% | |
| TCCATGATAGAGTTGGCGGA+AGG | - | chr4.3:43696037-43696056 | MS.gene09178:intron | 50.0% | |
| TCCCTTGTGCACCATAGACT+TGG | - | chr4.3:43694821-43694840 | MS.gene09178:intron | 50.0% | |
| TTACTCCTGGTGTTCCGGTT+GGG | - | chr4.3:43694197-43694216 | MS.gene09178:intron | 50.0% | |
| TTTACTCCTGGTGTTCCGGT+TGG | - | chr4.3:43694196-43694215 | MS.gene09178:intron | 50.0% | |
| TTTGACAGCATAGGCCCAAC+CGG | + | chr4.3:43694214-43694233 | None:intergenic | 50.0% | |
| ! | ATTGGTGCTTTCCATGGTCG+TGG | - | chr4.3:43697128-43697147 | MS.gene09178:intron | 50.0% |
| ! | GGCAGCTAAGAGAGTTTGCT+CGG | + | chr4.3:43693805-43693824 | None:intergenic | 50.0% |
| ! | TTCCCCGTCTAGTTCGAGTT+CGG | - | chr4.3:43698473-43698492 | MS.gene09178:CDS | 50.0% |
| ! | TTGGTGCTTTCCATGGTCGT+GGG | - | chr4.3:43697129-43697148 | MS.gene09178:intron | 50.0% |
| !! | CGACCATGGAAAGCACCAAT+AGG | + | chr4.3:43697128-43697147 | None:intergenic | 50.0% |
| ACAAAGCTCCCGCATACGCA+GGG | + | chr4.3:43696680-43696699 | None:intergenic | 55.0% | |
| AGAGCCAGGGACCTTTGGTT+TGG | + | chr4.3:43697573-43697592 | None:intergenic | 55.0% | |
| AGGCCGAACTCGAACTAGAC+GGG | + | chr4.3:43698479-43698498 | None:intergenic | 55.0% | |
| CAGGCCGAACTCGAACTAGA+CGG | + | chr4.3:43698480-43698499 | None:intergenic | 55.0% | |
| CAGTTGAGTGACCGCTTGGA+GGG | + | chr4.3:43696970-43696989 | None:intergenic | 55.0% | |
| CATACGCAGGGCCCAAAAAG+GGG | + | chr4.3:43696668-43696687 | None:intergenic | 55.0% | |
| CATGGTCGTGGGAAACGTAC+AGG | - | chr4.3:43697140-43697159 | MS.gene09178:intron | 55.0% | |
| CCACTGCAGCTCGGTAAACA+GGG | + | chr4.3:43698287-43698306 | None:intergenic | 55.0% | |
| CCCTTCCGCCAACTCTATCA+TGG | + | chr4.3:43696041-43696060 | None:intergenic | 55.0% | |
| CCGCTTGGAGGGTTCATATG+TGG | + | chr4.3:43696959-43696978 | None:intergenic | 55.0% | |
| CCTGTTTACCGAGCTGCAGT+GGG | - | chr4.3:43698285-43698304 | MS.gene09178:CDS | 55.0% | |
| CGTGCTCAGGTGATGCTTCA+TGG | - | chr4.3:43694313-43694332 | MS.gene09178:intron | 55.0% | |
| CTACTATGCCCACTGCAGCT+CGG | + | chr4.3:43698296-43698315 | None:intergenic | 55.0% | |
| CTGTACGTTTCCCACGACCA+TGG | + | chr4.3:43697142-43697161 | None:intergenic | 55.0% | |
| GCATACGCAGGGCCCAAAAA+GGG | + | chr4.3:43696669-43696688 | None:intergenic | 55.0% | |
| GGACCGGCAATGAGATTACC+TGG | + | chr4.3:43695627-43695646 | None:intergenic | 55.0% | |
| GGCCAAGTCTATGGTGCACA+AGG | + | chr4.3:43694826-43694845 | None:intergenic | 55.0% | |
| GTACACAGCAGCTTGGCCTA+AGG | + | chr4.3:43693826-43693845 | None:intergenic | 55.0% | |
| TGACCTATACTACAGGGGGG+GGG | + | chr4.3:43697806-43697825 | None:intergenic | 55.0% | |
| TGATAGAGTTGGCGGAAGGG+TGG | - | chr4.3:43696041-43696060 | MS.gene09178:intron | 55.0% | |
| ! | ATACGATGGAGAGCGTGCTC+AGG | - | chr4.3:43694300-43694319 | MS.gene09178:intron | 55.0% |
| ! | CGGTTAGCTGCTGCTGAGAT+AGG | - | chr4.3:43693983-43694002 | MS.gene09178:intron | 55.0% |
| ! | GAGCCAGGGACCTTTGGTTT+GGG | + | chr4.3:43697572-43697591 | None:intergenic | 55.0% |
| !! | CTTTTTGGGCCCTGCGTATG+CGG | - | chr4.3:43696668-43696687 | MS.gene09178:intron | 55.0% |
| !! | TTTTTGGGCCCTGCGTATGC+GGG | - | chr4.3:43696669-43696688 | MS.gene09178:intron | 55.0% |
| ATACTACAGGGGGGGGGGTA+AGG | + | chr4.3:43697800-43697819 | None:intergenic | 60.0% | |
| ATAGGCCCAACCGGAACACC+AGG | + | chr4.3:43694205-43694224 | None:intergenic | 60.0% | |
| CACAAAGCTCCCGCATACGC+AGG | + | chr4.3:43696681-43696700 | None:intergenic | 60.0% | |
| CAGCCAGTTGAGTGACCGCT+TGG | + | chr4.3:43696974-43696993 | None:intergenic | 60.0% | |
| CCAGTTGAGTGACCGCTTGG+AGG | + | chr4.3:43696971-43696990 | None:intergenic | 60.0% | |
| CCCACTGCAGCTCGGTAAAC+AGG | + | chr4.3:43698288-43698307 | None:intergenic | 60.0% | |
| CCCTGTTTACCGAGCTGCAG+TGG | - | chr4.3:43698284-43698303 | MS.gene09178:CDS | 60.0% | |
| CCTCCAAGCGGTCACTCAAC+TGG | - | chr4.3:43696968-43696987 | MS.gene09178:intron | 60.0% | |
| CGCATACGCAGGGCCCAAAA+AGG | + | chr4.3:43696670-43696689 | None:intergenic | 60.0% | |
| GACCTATACTACAGGGGGGG+GGG | + | chr4.3:43697805-43697824 | None:intergenic | 60.0% | |
| GCCTGACAAAGCTCCTGAGC+AGG | - | chr4.3:43698495-43698514 | MS.gene09178:CDS | 60.0% | |
| GGCCGAACTCGAACTAGACG+GGG | + | chr4.3:43698478-43698497 | None:intergenic | 60.0% | |
| TACCCCCCCCCCTGTAGTAT+AGG | - | chr4.3:43697800-43697819 | MS.gene09178:intron | 60.0% | |
| ! | ATGCGGGAGCTTTGTGCACC+AGG | - | chr4.3:43696685-43696704 | MS.gene09178:intron | 60.0% |
| ! | GCCTGCTCAGGAGCTTTGTC+AGG | + | chr4.3:43698499-43698518 | None:intergenic | 60.0% |
| TCAGACGAGGAGGCCTGCTC+AGG | + | chr4.3:43698511-43698530 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 43693603 | 43698534 | 43693603 | ID=MS.gene09178 |
| chr4.3 | mRNA | 43693603 | 43698534 | 43693603 | ID=MS.gene09178.t1;Parent=MS.gene09178 |
| chr4.3 | exon | 43698433 | 43698534 | 43698433 | ID=MS.gene09178.t1.exon1;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43698433 | 43698534 | 43698433 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43698241 | 43698357 | 43698241 | ID=MS.gene09178.t1.exon2;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43698241 | 43698357 | 43698241 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43697816 | 43698046 | 43697816 | ID=MS.gene09178.t1.exon3;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43697816 | 43698046 | 43697816 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43697635 | 43697729 | 43697635 | ID=MS.gene09178.t1.exon4;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43697635 | 43697729 | 43697635 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43696510 | 43696597 | 43696510 | ID=MS.gene09178.t1.exon5;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43696510 | 43696597 | 43696510 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43696165 | 43696296 | 43696165 | ID=MS.gene09178.t1.exon6;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43696165 | 43696296 | 43696165 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43695576 | 43695688 | 43695576 | ID=MS.gene09178.t1.exon7;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43695576 | 43695688 | 43695576 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43695118 | 43695219 | 43695118 | ID=MS.gene09178.t1.exon8;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43695118 | 43695219 | 43695118 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43694976 | 43695037 | 43694976 | ID=MS.gene09178.t1.exon9;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43694976 | 43695037 | 43694976 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43694732 | 43694803 | 43694732 | ID=MS.gene09178.t1.exon10;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43694732 | 43694803 | 43694732 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43694557 | 43694630 | 43694557 | ID=MS.gene09178.t1.exon11;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43694557 | 43694630 | 43694557 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43694411 | 43694467 | 43694411 | ID=MS.gene09178.t1.exon12;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43694411 | 43694467 | 43694411 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43693811 | 43693888 | 43693811 | ID=MS.gene09178.t1.exon13;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43693811 | 43693888 | 43693811 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| chr4.3 | exon | 43693603 | 43693680 | 43693603 | ID=MS.gene09178.t1.exon14;Parent=MS.gene09178.t1 |
| chr4.3 | CDS | 43693603 | 43693680 | 43693603 | ID=cds.MS.gene09178.t1;Parent=MS.gene09178.t1 |
| Gene Sequence |
| Protein sequence |
