Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09612.t1 | XP_003611551.2 | 99.3 | 451 | 3 | 0 | 1 | 451 | 1 | 451 | 3.90E-250 | 873.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09612.t1 | Q058P4 | 74.3 | 451 | 113 | 1 | 1 | 451 | 1 | 448 | 1.0e-190 | 667.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09612.t1 | G7K2F8 | 99.3 | 451 | 3 | 0 | 1 | 451 | 1 | 451 | 2.8e-250 | 873.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene09612 | 0.808307 | 3.30E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene09612 | 0.8086 | 2.86E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene09612 | 0.825331 | 4.97E-54 | -1.69E-46 |
| MS.gene050551 | MS.gene09612 | 0.809403 | 1.93E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene09612 | 0.817642 | 2.97E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene09612 | 0.856864 | 2.41E-62 | -1.69E-46 |
| MS.gene051003 | MS.gene09612 | 0.802473 | 5.52E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene09612 | 0.803988 | 2.68E-49 | -1.69E-46 |
| MS.gene051233 | MS.gene09612 | 0.804877 | 1.75E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene09612 | 0.852875 | 3.46E-61 | -1.69E-46 |
| MS.gene051343 | MS.gene09612 | 0.823651 | 1.24E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene09612 | 0.817992 | 2.47E-52 | -1.69E-46 |
| MS.gene052335 | MS.gene09612 | 0.833816 | 4.29E-56 | -1.69E-46 |
| MS.gene052609 | MS.gene09612 | 0.810269 | 1.25E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene09612 | 0.835733 | 1.41E-56 | -1.69E-46 |
| MS.gene053581 | MS.gene09612 | 0.836219 | 1.06E-56 | -1.69E-46 |
| MS.gene054554 | MS.gene09612 | 0.813003 | 3.19E-51 | -1.69E-46 |
| MS.gene054824 | MS.gene09612 | 0.807056 | 6.09E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene09612 | 0.811728 | 6.05E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene09612 | 0.836811 | 7.52E-57 | -1.69E-46 |
| MS.gene056181 | MS.gene09612 | 0.808421 | 3.12E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene09612 | 0.812912 | 3.34E-51 | -1.69E-46 |
| MS.gene058638 | MS.gene09612 | 0.807152 | 5.81E-50 | -1.69E-46 |
| MS.gene058639 | MS.gene09612 | 0.81807 | 2.37E-52 | -1.69E-46 |
| MS.gene058720 | MS.gene09612 | 0.802741 | 4.86E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene09612 | 0.812595 | 3.92E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene09612 | 0.814196 | 1.74E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene09612 | 0.813977 | 1.95E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene09612 | 0.842949 | 1.89E-58 | -1.69E-46 |
| MS.gene061100 | MS.gene09612 | 0.821802 | 3.33E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09612.t1 | MTR_5g015210 | 99.335 | 451 | 3 | 0 | 1 | 451 | 1 | 451 | 0.0 | 909 |
| MS.gene09612.t1 | MTR_1g017770 | 62.899 | 407 | 145 | 4 | 51 | 451 | 28 | 434 | 2.70e-175 | 498 |
| MS.gene09612.t1 | MTR_8g092870 | 30.653 | 398 | 248 | 10 | 63 | 434 | 5 | 400 | 3.87e-39 | 146 |
| MS.gene09612.t1 | MTR_3g095730 | 29.383 | 405 | 254 | 8 | 58 | 434 | 1 | 401 | 9.90e-36 | 137 |
| MS.gene09612.t1 | MTR_4g085720 | 28.535 | 389 | 264 | 9 | 55 | 430 | 1 | 388 | 2.57e-35 | 135 |
| MS.gene09612.t1 | MTR_6g071340 | 28.784 | 403 | 236 | 10 | 67 | 430 | 5 | 395 | 1.53e-32 | 128 |
| MS.gene09612.t1 | MTR_5g077510 | 29.676 | 401 | 227 | 11 | 67 | 430 | 35 | 417 | 1.62e-32 | 128 |
| MS.gene09612.t1 | MTR_5g048050 | 29.529 | 403 | 233 | 11 | 67 | 430 | 25 | 415 | 6.00e-32 | 127 |
| MS.gene09612.t1 | MTR_7g106340 | 27.500 | 400 | 263 | 8 | 66 | 438 | 7 | 406 | 3.65e-31 | 124 |
| MS.gene09612.t1 | MTR_2g087350 | 28.645 | 391 | 257 | 9 | 66 | 438 | 5 | 391 | 6.41e-30 | 120 |
| MS.gene09612.t1 | MTR_4g063800 | 27.049 | 366 | 245 | 7 | 67 | 417 | 255 | 613 | 1.19e-28 | 119 |
| MS.gene09612.t1 | MTR_3g065080 | 26.615 | 387 | 256 | 7 | 67 | 430 | 36 | 417 | 1.36e-27 | 114 |
| MS.gene09612.t1 | MTR_1g094215 | 27.193 | 342 | 218 | 6 | 67 | 388 | 64 | 394 | 4.06e-27 | 113 |
| MS.gene09612.t1 | MTR_7g059405 | 27.177 | 379 | 250 | 11 | 67 | 430 | 264 | 631 | 1.64e-26 | 112 |
| MS.gene09612.t1 | MTR_1g094215 | 27.193 | 342 | 218 | 6 | 67 | 388 | 247 | 577 | 2.75e-26 | 112 |
| MS.gene09612.t1 | MTR_4g485520 | 27.195 | 353 | 228 | 11 | 67 | 399 | 105 | 448 | 8.47e-26 | 110 |
| MS.gene09612.t1 | MTR_4g485520 | 27.195 | 353 | 228 | 11 | 67 | 399 | 273 | 616 | 1.99e-25 | 109 |
| MS.gene09612.t1 | MTR_7g078330 | 25.916 | 382 | 240 | 8 | 67 | 425 | 274 | 635 | 1.89e-24 | 106 |
| MS.gene09612.t1 | MTR_3g096370 | 27.577 | 388 | 252 | 11 | 67 | 430 | 10 | 392 | 4.48e-24 | 103 |
| MS.gene09612.t1 | MTR_1g056870 | 25.899 | 417 | 265 | 9 | 66 | 438 | 6 | 422 | 1.67e-23 | 102 |
| MS.gene09612.t1 | MTR_1g056910 | 26.768 | 396 | 244 | 15 | 66 | 429 | 5 | 386 | 2.98e-23 | 101 |
| MS.gene09612.t1 | MTR_1g056880 | 25.899 | 417 | 265 | 9 | 66 | 438 | 6 | 422 | 4.76e-23 | 101 |
| MS.gene09612.t1 | MTR_1g056840 | 25.481 | 416 | 242 | 10 | 66 | 438 | 6 | 396 | 3.24e-22 | 98.6 |
| MS.gene09612.t1 | MTR_5g083030 | 25.281 | 356 | 226 | 6 | 67 | 389 | 293 | 641 | 1.89e-21 | 97.8 |
| MS.gene09612.t1 | MTR_4g107010 | 27.273 | 363 | 232 | 12 | 52 | 388 | 264 | 620 | 1.97e-20 | 94.7 |
| MS.gene09612.t1 | MTR_4g051515 | 22.803 | 421 | 272 | 12 | 66 | 448 | 5 | 410 | 4.36e-20 | 92.4 |
| MS.gene09612.t1 | MTR_7g116600 | 26.590 | 346 | 213 | 10 | 68 | 388 | 79 | 408 | 1.60e-19 | 91.3 |
| MS.gene09612.t1 | MTR_2g018010 | 26.241 | 282 | 185 | 5 | 67 | 327 | 292 | 571 | 3.93e-19 | 90.9 |
| MS.gene09612.t1 | MTR_7g053260 | 25.882 | 340 | 222 | 11 | 68 | 388 | 79 | 407 | 1.43e-18 | 88.2 |
| MS.gene09612.t1 | MTR_3g078160 | 26.316 | 342 | 226 | 8 | 68 | 388 | 276 | 612 | 7.25e-18 | 86.7 |
| MS.gene09612.t1 | MTR_3g078160 | 26.316 | 342 | 226 | 8 | 68 | 388 | 276 | 612 | 7.67e-18 | 86.7 |
| MS.gene09612.t1 | MTR_5g034440 | 27.893 | 337 | 211 | 10 | 38 | 351 | 255 | 582 | 1.02e-17 | 86.3 |
| MS.gene09612.t1 | MTR_2g011140 | 25.455 | 275 | 188 | 5 | 73 | 337 | 21 | 288 | 1.92e-16 | 81.3 |
| MS.gene09612.t1 | MTR_1g079450 | 27.138 | 269 | 176 | 8 | 67 | 320 | 63 | 326 | 2.86e-16 | 81.3 |
| MS.gene09612.t1 | MTR_3g085610 | 50.000 | 72 | 36 | 0 | 68 | 139 | 281 | 352 | 8.37e-16 | 80.5 |
| MS.gene09612.t1 | MTR_4g028960 | 25.292 | 257 | 158 | 7 | 60 | 287 | 274 | 525 | 4.16e-15 | 78.2 |
| MS.gene09612.t1 | MTR_3g078160 | 26.809 | 235 | 156 | 5 | 68 | 286 | 276 | 510 | 3.85e-14 | 74.7 |
| MS.gene09612.t1 | MTR_1g069845 | 48.485 | 66 | 34 | 0 | 68 | 133 | 125 | 190 | 5.60e-14 | 74.3 |
| MS.gene09612.t1 | MTR_3g466220 | 44.578 | 83 | 46 | 0 | 51 | 133 | 217 | 299 | 6.57e-14 | 74.7 |
| MS.gene09612.t1 | MTR_3g466220 | 44.578 | 83 | 46 | 0 | 51 | 133 | 196 | 278 | 7.61e-14 | 74.3 |
| MS.gene09612.t1 | MTR_1g069845 | 48.485 | 66 | 34 | 0 | 68 | 133 | 246 | 311 | 8.33e-14 | 73.9 |
| MS.gene09612.t1 | MTR_1g069845 | 48.485 | 66 | 34 | 0 | 68 | 133 | 242 | 307 | 8.60e-14 | 73.9 |
| MS.gene09612.t1 | MTR_4g091880 | 27.190 | 331 | 196 | 10 | 66 | 388 | 4 | 297 | 1.71e-13 | 72.0 |
| MS.gene09612.t1 | MTR_4g091880 | 32.847 | 137 | 79 | 4 | 66 | 197 | 4 | 132 | 4.15e-13 | 70.9 |
| MS.gene09612.t1 | MTR_8g077205 | 46.970 | 66 | 35 | 0 | 68 | 133 | 276 | 341 | 6.76e-13 | 71.2 |
| MS.gene09612.t1 | MTR_8g077205 | 46.970 | 66 | 35 | 0 | 68 | 133 | 164 | 229 | 7.27e-13 | 71.2 |
| MS.gene09612.t1 | MTR_1g093965 | 41.892 | 74 | 43 | 0 | 80 | 153 | 1 | 74 | 1.46e-12 | 67.0 |
| MS.gene09612.t1 | MTR_1g093995 | 41.892 | 74 | 43 | 0 | 80 | 153 | 1 | 74 | 1.76e-12 | 66.6 |
| MS.gene09612.t1 | MTR_8g080280 | 45.714 | 70 | 38 | 0 | 68 | 137 | 283 | 352 | 2.65e-12 | 69.3 |
| MS.gene09612.t1 | MTR_1g090320 | 41.237 | 97 | 54 | 2 | 68 | 162 | 514 | 609 | 4.02e-12 | 69.3 |
| MS.gene09612.t1 | MTR_1g090320 | 41.237 | 97 | 54 | 2 | 68 | 162 | 516 | 611 | 4.09e-12 | 69.3 |
| MS.gene09612.t1 | MTR_3g115670 | 29.921 | 127 | 81 | 2 | 45 | 163 | 8 | 134 | 4.87e-12 | 68.6 |
| MS.gene09612.t1 | MTR_8g103227 | 47.761 | 67 | 34 | 1 | 68 | 133 | 396 | 462 | 4.88e-12 | 68.9 |
| MS.gene09612.t1 | MTR_7g097020 | 44.776 | 67 | 37 | 0 | 67 | 133 | 241 | 307 | 1.13e-11 | 67.4 |
| MS.gene09612.t1 | MTR_7g005940 | 35.398 | 113 | 54 | 3 | 67 | 161 | 595 | 706 | 3.95e-11 | 65.9 |
| MS.gene09612.t1 | MTR_7g005940 | 35.398 | 113 | 54 | 3 | 67 | 161 | 595 | 706 | 4.27e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09612.t1 | AT3G49810 | 74.058 | 451 | 114 | 1 | 1 | 451 | 1 | 448 | 0.0 | 668 |
| MS.gene09612.t1 | AT5G65920 | 71.619 | 451 | 121 | 1 | 1 | 451 | 1 | 444 | 0.0 | 650 |
| MS.gene09612.t1 | AT5G65920 | 71.619 | 451 | 121 | 1 | 1 | 451 | 1 | 444 | 0.0 | 650 |
| MS.gene09612.t1 | AT3G19380 | 30.628 | 382 | 240 | 11 | 57 | 416 | 3 | 381 | 6.34e-41 | 151 |
| MS.gene09612.t1 | AT1G49780 | 29.484 | 407 | 261 | 9 | 66 | 449 | 13 | 416 | 9.03e-37 | 140 |
| MS.gene09612.t1 | AT2G35930 | 26.566 | 399 | 266 | 9 | 66 | 443 | 11 | 403 | 8.18e-35 | 134 |
| MS.gene09612.t1 | AT5G64660 | 29.877 | 405 | 244 | 15 | 63 | 434 | 5 | 402 | 3.18e-33 | 130 |
| MS.gene09612.t1 | AT3G18710 | 28.244 | 393 | 255 | 10 | 67 | 436 | 12 | 400 | 2.11e-32 | 127 |
| MS.gene09612.t1 | AT3G54850 | 27.344 | 384 | 247 | 10 | 67 | 430 | 248 | 619 | 1.16e-30 | 125 |
| MS.gene09612.t1 | AT5G09800 | 26.794 | 418 | 259 | 13 | 60 | 447 | 4 | 404 | 6.32e-30 | 120 |
| MS.gene09612.t1 | AT1G23030 | 27.746 | 346 | 226 | 9 | 67 | 398 | 241 | 576 | 4.57e-29 | 120 |
| MS.gene09612.t1 | AT1G66160 | 26.753 | 385 | 260 | 8 | 60 | 430 | 27 | 403 | 2.68e-27 | 113 |
| MS.gene09612.t1 | AT3G52450 | 25.837 | 418 | 261 | 10 | 58 | 430 | 1 | 414 | 7.42e-26 | 109 |
| MS.gene09612.t1 | AT1G71020 | 25.714 | 350 | 237 | 7 | 67 | 398 | 95 | 439 | 1.72e-25 | 108 |
| MS.gene09612.t1 | AT3G46510 | 25.195 | 385 | 257 | 7 | 67 | 432 | 256 | 628 | 3.08e-25 | 109 |
| MS.gene09612.t1 | AT1G71020 | 25.714 | 350 | 237 | 7 | 67 | 398 | 243 | 587 | 3.48e-25 | 108 |
| MS.gene09612.t1 | AT5G42340 | 29.339 | 242 | 147 | 5 | 67 | 302 | 290 | 513 | 5.63e-25 | 108 |
| MS.gene09612.t1 | AT2G28830 | 25.588 | 340 | 229 | 6 | 68 | 388 | 185 | 519 | 2.16e-23 | 103 |
| MS.gene09612.t1 | AT5G37490 | 23.684 | 380 | 274 | 5 | 67 | 430 | 31 | 410 | 5.21e-20 | 92.4 |
| MS.gene09612.t1 | AT1G66160 | 24.675 | 385 | 252 | 9 | 60 | 430 | 27 | 387 | 1.32e-18 | 88.2 |
| MS.gene09612.t1 | AT1G29340 | 30.978 | 184 | 108 | 3 | 67 | 232 | 305 | 487 | 6.33e-18 | 87.0 |
| MS.gene09612.t1 | AT3G07360 | 29.004 | 231 | 138 | 8 | 55 | 261 | 57 | 285 | 2.15e-16 | 81.6 |
| MS.gene09612.t1 | AT5G01830 | 27.143 | 280 | 184 | 6 | 22 | 286 | 230 | 504 | 2.38e-16 | 82.0 |
| MS.gene09612.t1 | AT3G11840 | 53.247 | 77 | 34 | 2 | 58 | 133 | 1 | 76 | 1.09e-15 | 79.3 |
| MS.gene09612.t1 | AT4G21350 | 25.826 | 333 | 227 | 8 | 66 | 388 | 4 | 326 | 2.86e-15 | 77.4 |
| MS.gene09612.t1 | AT1G67530 | 51.429 | 70 | 34 | 0 | 68 | 137 | 273 | 342 | 9.54e-15 | 77.0 |
| MS.gene09612.t1 | AT1G67530 | 51.429 | 70 | 34 | 0 | 68 | 137 | 273 | 342 | 9.54e-15 | 77.0 |
| MS.gene09612.t1 | AT1G67530 | 51.429 | 70 | 34 | 0 | 68 | 137 | 273 | 342 | 9.54e-15 | 77.0 |
| MS.gene09612.t1 | AT1G67530 | 51.429 | 70 | 34 | 0 | 68 | 137 | 273 | 342 | 1.15e-14 | 76.6 |
| MS.gene09612.t1 | AT1G10560 | 25.000 | 312 | 199 | 8 | 71 | 355 | 292 | 595 | 1.71e-14 | 76.3 |
| MS.gene09612.t1 | AT1G24330 | 50.000 | 70 | 35 | 0 | 68 | 137 | 276 | 345 | 4.40e-14 | 75.1 |
| MS.gene09612.t1 | AT1G24330 | 50.000 | 70 | 35 | 0 | 68 | 137 | 276 | 345 | 4.40e-14 | 75.1 |
| MS.gene09612.t1 | AT1G60190 | 24.348 | 345 | 223 | 11 | 73 | 388 | 284 | 619 | 6.51e-14 | 74.3 |
| MS.gene09612.t1 | AT1G27910 | 50.000 | 70 | 35 | 0 | 68 | 137 | 280 | 349 | 6.89e-14 | 74.3 |
| MS.gene09612.t1 | AT2G23140 | 46.032 | 63 | 34 | 0 | 71 | 133 | 234 | 296 | 5.65e-12 | 68.6 |
| MS.gene09612.t1 | AT2G23140 | 46.032 | 63 | 34 | 0 | 71 | 133 | 234 | 296 | 5.65e-12 | 68.6 |
| MS.gene09612.t1 | AT2G23140 | 46.032 | 63 | 34 | 0 | 71 | 133 | 237 | 299 | 5.66e-12 | 68.6 |
| MS.gene09612.t1 | AT2G23140 | 46.032 | 63 | 34 | 0 | 71 | 133 | 45 | 107 | 5.87e-12 | 68.2 |
| MS.gene09612.t1 | AT2G23140 | 46.032 | 63 | 34 | 0 | 71 | 133 | 45 | 107 | 5.87e-12 | 68.2 |
| MS.gene09612.t1 | AT3G54790 | 41.176 | 68 | 40 | 0 | 67 | 134 | 202 | 269 | 6.32e-12 | 68.2 |
| MS.gene09612.t1 | AT3G54790 | 41.176 | 68 | 40 | 0 | 67 | 134 | 238 | 305 | 7.86e-12 | 68.2 |
| MS.gene09612.t1 | AT3G54790 | 41.176 | 68 | 40 | 0 | 67 | 134 | 238 | 305 | 7.86e-12 | 68.2 |
| MS.gene09612.t1 | AT5G67340 | 44.776 | 67 | 37 | 0 | 67 | 133 | 240 | 306 | 9.85e-12 | 67.8 |
| MS.gene09612.t1 | AT5G67340 | 44.776 | 67 | 37 | 0 | 67 | 133 | 240 | 306 | 9.85e-12 | 67.8 |
| MS.gene09612.t1 | AT5G18330 | 23.585 | 318 | 215 | 11 | 13 | 320 | 26 | 325 | 5.52e-11 | 64.7 |
Find 96 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGATTGTTGTTTCAATAT+TGG | 0.233260 | 5.2:+7167493 | None:intergenic |
| GGAATTAGCCCTTTGTGTTT+TGG | 0.251271 | 5.2:-7167740 | MS.gene09612:CDS |
| TGCATTGGTTCAAGAGAAAT+TGG | 0.251419 | 5.2:+7168525 | None:intergenic |
| TATCTCCAGTCATAGTTTAT+TGG | 0.252993 | 5.2:-7167932 | MS.gene09612:CDS |
| CTCCAAACACAACACTTTAT+AGG | 0.268814 | 5.2:-7168383 | MS.gene09612:CDS |
| CTATGTATCAGCCTTCTAAA+AGG | 0.293724 | 5.2:-7168740 | MS.gene09612:CDS |
| TGTCCAGTGCAAAGAGTAAC+AGG | 0.310547 | 5.2:+7168498 | None:intergenic |
| TACAACTATGCAAGAGCTTT+GGG | 0.339571 | 5.2:-7168418 | MS.gene09612:CDS |
| CCAACAGCATGTGAAGTAAA+AGG | 0.340191 | 5.2:+7168138 | None:intergenic |
| CAGAACAGTGTGCTTCTATA+AGG | 0.348100 | 5.2:-7167842 | MS.gene09612:CDS |
| ACCTGCAAAGATTTCTTTGA+TGG | 0.353869 | 5.2:-7168049 | MS.gene09612:CDS |
| GAGAATGTTGTTCCTCTCAT+AGG | 0.363619 | 5.2:+7168473 | None:intergenic |
| GCTGTTGGTTCTGAAGTTAT+TGG | 0.374377 | 5.2:-7168123 | MS.gene09612:CDS |
| GGGTATGAGGGTGGTGGTGA+TGG | 0.376806 | 5.2:-7168705 | MS.gene09612:CDS |
| TCGTCGATTGCCGTTGATGC+AGG | 0.377688 | 5.2:-7167559 | MS.gene09612:CDS |
| GTTGATTGTGGTGGTATTGT+AGG | 0.378694 | 5.2:-7168633 | MS.gene09612:CDS |
| TTCAAAGCTACCCTGCCTTC+AGG | 0.379046 | 5.2:+7167700 | None:intergenic |
| AACCTATAAAGTGTTGTGTT+TGG | 0.386427 | 5.2:+7168381 | None:intergenic |
| ACCATCAAAGAAATCTTTGC+AGG | 0.386948 | 5.2:+7168048 | None:intergenic |
| AGCTGTGAAAGATGGGGTTT+TGG | 0.389850 | 5.2:-7168661 | MS.gene09612:CDS |
| CAAAGCTCTTGCATAGTTGT+AGG | 0.392894 | 5.2:+7168420 | None:intergenic |
| AGCTAGAGTTCATGCTTTGA+AGG | 0.394200 | 5.2:-7168250 | MS.gene09612:CDS |
| CAATTAGTTGAATTGTTGTC+TGG | 0.396249 | 5.2:-7167781 | MS.gene09612:CDS |
| TCAGCCTTCTAAAAGGGATA+TGG | 0.401063 | 5.2:-7168733 | MS.gene09612:CDS |
| CTACAACTATGCAAGAGCTT+TGG | 0.413732 | 5.2:-7168419 | MS.gene09612:CDS |
| ATTGTAGGAACTGGTGTTGT+TGG | 0.418341 | 5.2:-7168618 | MS.gene09612:CDS |
| TGAAGGCAGGGTAGCTTTGA+AGG | 0.418617 | 5.2:-7167698 | MS.gene09612:CDS |
| GGATATGGTTGTTGGGTATG+AGG | 0.419887 | 5.2:-7168718 | MS.gene09612:CDS |
| AGTTGAATTGTTGTCTGGTA+TGG | 0.429978 | 5.2:-7167776 | MS.gene09612:CDS |
| CCAGTGTCATTGGATGGTTC+TGG | 0.433464 | 5.2:+7167405 | None:intergenic |
| TCTAAAAGGGATATGGTTGT+TGG | 0.433712 | 5.2:-7168726 | MS.gene09612:CDS |
| ATCAAAAGTCTCACCATGAT+AGG | 0.446610 | 5.2:+7167658 | None:intergenic |
| AGCGGCAAGCCCTGCATCAA+CGG | 0.453178 | 5.2:+7167549 | None:intergenic |
| TGGTATGGACCATGATTGTT+TGG | 0.458739 | 5.2:-7167761 | MS.gene09612:CDS |
| TGATGGTCAGATTCTAGATC+TGG | 0.470143 | 5.2:-7168688 | MS.gene09612:CDS |
| CTGGACACAGCTGTGAAAGA+TGG | 0.472189 | 5.2:-7168669 | MS.gene09612:CDS |
| CTAAAAGGGATATGGTTGTT+GGG | 0.472206 | 5.2:-7168725 | MS.gene09612:CDS |
| TGGATTGATGAGGCTTGTTA+AGG | 0.477377 | 5.2:-7167908 | MS.gene09612:CDS |
| AAGTGTTGTGTTTGGAGTGA+TGG | 0.479659 | 5.2:+7168389 | None:intergenic |
| CGTCGATTGCCGTTGATGCA+GGG | 0.480126 | 5.2:-7167558 | MS.gene09612:CDS |
| TGGACACAGCTGTGAAAGAT+GGG | 0.480846 | 5.2:-7168668 | MS.gene09612:CDS |
| TCCAGTCATAGTTTATTGGT+TGG | 0.484055 | 5.2:-7167928 | MS.gene09612:CDS |
| AGAGGAACAACATTCTCAAA+TGG | 0.486614 | 5.2:-7168467 | MS.gene09612:CDS |
| GCACGTAAGTCTGTGATTGA+TGG | 0.491037 | 5.2:-7168195 | MS.gene09612:CDS |
| TTGGGTGGTGTTGATTGTGG+TGG | 0.491523 | 5.2:-7168642 | MS.gene09612:CDS |
| TTTATAGGTTGATATATACT+TGG | 0.491768 | 5.2:-7168368 | MS.gene09612:CDS |
| TGTTAACACCATACCTATCA+TGG | 0.494074 | 5.2:-7167671 | MS.gene09612:CDS |
| CATAGCAATGGAATCTGTCC+TGG | 0.495678 | 5.2:-7167877 | MS.gene09612:CDS |
| GGCAATCGACGAACACTCCT+CGG | 0.495695 | 5.2:+7167570 | None:intergenic |
| AGGAAGAGCTTCTGAGCTTG+TGG | 0.496986 | 5.2:-7168298 | MS.gene09612:CDS |
| ATGGTTGTTGGGTATGAGGG+TGG | 0.497015 | 5.2:-7168714 | MS.gene09612:CDS |
| TCCAACCAATAAACTATGAC+TGG | 0.497209 | 5.2:+7167927 | None:intergenic |
| TGTGGTGGTATTGTAGGAAC+TGG | 0.497597 | 5.2:-7168627 | MS.gene09612:CDS |
| GTTGATTGAAACGTTAATTG+AGG | 0.502694 | 5.2:-7167977 | MS.gene09612:CDS |
| GATATGGTTGTTGGGTATGA+GGG | 0.510561 | 5.2:-7168717 | MS.gene09612:CDS |
| ATTCTCAAATGGTTTAACAT+AGG | 0.513727 | 5.2:-7168456 | MS.gene09612:CDS |
| TATGTATCAGCCTTCTAAAA+GGG | 0.514271 | 5.2:-7168739 | MS.gene09612:CDS |
| CTTACACTTGGAAATGAAGA+TGG | 0.515200 | 5.2:+7167432 | None:intergenic |
| GATGGTTGATATCTTGAATG+AGG | 0.519499 | 5.2:-7168031 | MS.gene09612:CDS |
| CTCCTTCTTGTGATTCAAAG+TGG | 0.522084 | 5.2:-7167523 | MS.gene09612:CDS |
| TATCGTCAATACCTGAAGGC+AGG | 0.524187 | 5.2:-7167711 | MS.gene09612:CDS |
| GACCCTGTTACTCTTTGCAC+TGG | 0.524861 | 5.2:-7168501 | MS.gene09612:CDS |
| GAAGGAGCTTCATCAAGTTG+TGG | 0.525660 | 5.2:-7168232 | MS.gene09612:CDS |
| AAGAGGTCTGAAGATGTTCA+AGG | 0.532675 | 5.2:-7168318 | MS.gene09612:CDS |
| GTTGTTGGGTATGAGGGTGG+TGG | 0.533466 | 5.2:-7168711 | MS.gene09612:CDS |
| TTTAATCCAGTGTCATTGGA+TGG | 0.544882 | 5.2:+7167399 | None:intergenic |
| GCAATCGACGAACACTCCTC+GGG | 0.548555 | 5.2:+7167571 | None:intergenic |
| GGGCTAATTCCAAACAATCA+TGG | 0.556734 | 5.2:+7167752 | None:intergenic |
| AGAGTAACAGGGTCTTGCAT+TGG | 0.556765 | 5.2:+7168510 | None:intergenic |
| TAACGAATCCAAAACACAAA+GGG | 0.557474 | 5.2:+7167732 | None:intergenic |
| AAGTCTCACCATGATAGGTA+TGG | 0.557498 | 5.2:+7167663 | None:intergenic |
| GTTTATTGGTTGGATTGATG+AGG | 0.566504 | 5.2:-7167918 | MS.gene09612:CDS |
| GGTTCTGGTAAGCTTACACT+TGG | 0.573632 | 5.2:+7167420 | None:intergenic |
| AGTACTTGTTGATGAAGAAG+AGG | 0.579589 | 5.2:-7168335 | MS.gene09612:CDS |
| TGTTTGCAAGCTCGCACCCG+AGG | 0.590908 | 5.2:-7167587 | MS.gene09612:CDS |
| AATCACAAGAAGGAGCTTAG+CGG | 0.593465 | 5.2:+7167531 | None:intergenic |
| ATGGTTGATATCTTGAATGA+GGG | 0.598018 | 5.2:-7168030 | MS.gene09612:CDS |
| TATAGAAGCACACTGTTCTG+AGG | 0.600791 | 5.2:+7167845 | None:intergenic |
| ATCGTCAATACCTGAAGGCA+GGG | 0.601834 | 5.2:-7167710 | MS.gene09612:CDS |
| AACCACTTTGAATCACAAGA+AGG | 0.602714 | 5.2:+7167521 | None:intergenic |
| GTTCTGAGGAGGCTTAATCC+AGG | 0.612490 | 5.2:+7167859 | None:intergenic |
| GGAGACACTCAAGAAGGTGA+AGG | 0.620138 | 5.2:-7168277 | MS.gene09612:CDS |
| AGAAGCACACTGTTCTGAGG+AGG | 0.626107 | 5.2:+7167848 | None:intergenic |
| GAGACACTCAAGAAGGTGAA+GGG | 0.631748 | 5.2:-7168276 | MS.gene09612:CDS |
| ATTGGACAAATGAAAACACT+TGG | 0.634832 | 5.2:+7168543 | None:intergenic |
| TCGTTATCGTCAATACCTGA+AGG | 0.636371 | 5.2:-7167715 | MS.gene09612:CDS |
| ACTATGACTGGAGATAATCT+CGG | 0.641637 | 5.2:+7167939 | None:intergenic |
| AAGTCTGTGATTGATGGAGG+TGG | 0.645793 | 5.2:-7168189 | MS.gene09612:CDS |
| GCTTGTGGAGACACTCAAGA+AGG | 0.651353 | 5.2:-7168283 | MS.gene09612:CDS |
| CGTAAGTCTGTGATTGATGG+AGG | 0.663245 | 5.2:-7168192 | MS.gene09612:CDS |
| AAGGATAAGAGACATAGCAA+TGG | 0.668679 | 5.2:-7167889 | MS.gene09612:CDS |
| GCACTGGACAAACCTATGAG+AGG | 0.669601 | 5.2:-7168485 | MS.gene09612:CDS |
| ATAACGAATCCAAAACACAA+AGG | 0.671691 | 5.2:+7167731 | None:intergenic |
| GGACACAGCTGTGAAAGATG+GGG | 0.688951 | 5.2:-7168667 | MS.gene09612:CDS |
| AGACTAAAATCAGTTGCACG+CGG | 0.721441 | 5.2:-7167999 | MS.gene09612:CDS |
| GTCCAGTGCAAAGAGTAACA+GGG | 0.727176 | 5.2:+7168499 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATAGGTTGATATATACT+TGG | - | chr5.2:7167787-7167806 | MS.gene09612:CDS | 20.0% |
| ! | ATTCTCAAATGGTTTAACAT+AGG | - | chr5.2:7167699-7167718 | MS.gene09612:CDS | 25.0% |
| !! | AAGATTTTGTTAGTTAGCAT+TGG | - | chr5.2:7168341-7168360 | MS.gene09612:CDS | 25.0% |
| ATAACGAATCCAAAACACAA+AGG | + | chr5.2:7168427-7168446 | None:intergenic | 30.0% | |
| ATTGGACAAATGAAAACACT+TGG | + | chr5.2:7167615-7167634 | None:intergenic | 30.0% | |
| CAATTAGTTGAATTGTTGTC+TGG | - | chr5.2:7168374-7168393 | MS.gene09612:CDS | 30.0% | |
| GTTGATTGAAACGTTAATTG+AGG | - | chr5.2:7168178-7168197 | MS.gene09612:CDS | 30.0% | |
| TAACGAATCCAAAACACAAA+GGG | + | chr5.2:7168426-7168445 | None:intergenic | 30.0% | |
| TATCTCCAGTCATAGTTTAT+TGG | - | chr5.2:7168223-7168242 | MS.gene09612:CDS | 30.0% | |
| ! | AGTATGCATTGTCAATTTTG+TGG | - | chr5.2:7168543-7168562 | MS.gene09612:CDS | 30.0% |
| ! | ATGGTTGATATCTTGAATGA+GGG | - | chr5.2:7168125-7168144 | MS.gene09612:CDS | 30.0% |
| ! | TATGTATCAGCCTTCTAAAA+GGG | - | chr5.2:7167416-7167435 | MS.gene09612:CDS | 30.0% |
| ! | TCTGTTTTGTCTTCTTTACT+TGG | - | chr5.2:7167993-7168012 | MS.gene09612:CDS | 30.0% |
| !! | AACCTATAAAGTGTTGTGTT+TGG | + | chr5.2:7167777-7167796 | None:intergenic | 30.0% |
| !! | GCAGATTGTTGTTTCAATAT+TGG | + | chr5.2:7168665-7168684 | None:intergenic | 30.0% |
| AACCACTTTGAATCACAAGA+AGG | + | chr5.2:7168637-7168656 | None:intergenic | 35.0% | |
| AAGGATAAGAGACATAGCAA+TGG | - | chr5.2:7168266-7168285 | MS.gene09612:CDS | 35.0% | |
| ACCATCAAAGAAATCTTTGC+AGG | + | chr5.2:7168110-7168129 | None:intergenic | 35.0% | |
| ACCTGCAAAGATTTCTTTGA+TGG | - | chr5.2:7168106-7168125 | MS.gene09612:CDS | 35.0% | |
| ACTATGACTGGAGATAATCT+CGG | + | chr5.2:7168219-7168238 | None:intergenic | 35.0% | |
| AGAGGAACAACATTCTCAAA+TGG | - | chr5.2:7167688-7167707 | MS.gene09612:CDS | 35.0% | |
| AGTTGAATTGTTGTCTGGTA+TGG | - | chr5.2:7168379-7168398 | MS.gene09612:CDS | 35.0% | |
| ATCAAAAGTCTCACCATGAT+AGG | + | chr5.2:7168500-7168519 | None:intergenic | 35.0% | |
| CTAAAAGGGATATGGTTGTT+GGG | - | chr5.2:7167430-7167449 | MS.gene09612:CDS | 35.0% | |
| CTATGTATCAGCCTTCTAAA+AGG | - | chr5.2:7167415-7167434 | MS.gene09612:CDS | 35.0% | |
| CTCCAAACACAACACTTTAT+AGG | - | chr5.2:7167772-7167791 | MS.gene09612:CDS | 35.0% | |
| CTTACACTTGGAAATGAAGA+TGG | + | chr5.2:7168726-7168745 | None:intergenic | 35.0% | |
| TACAACTATGCAAGAGCTTT+GGG | - | chr5.2:7167737-7167756 | MS.gene09612:CDS | 35.0% | |
| TCCAACCAATAAACTATGAC+TGG | + | chr5.2:7168231-7168250 | None:intergenic | 35.0% | |
| TCCAGTCATAGTTTATTGGT+TGG | - | chr5.2:7168227-7168246 | MS.gene09612:CDS | 35.0% | |
| TCTAAAAGGGATATGGTTGT+TGG | - | chr5.2:7167429-7167448 | MS.gene09612:CDS | 35.0% | |
| TGTTAACACCATACCTATCA+TGG | - | chr5.2:7168484-7168503 | MS.gene09612:CDS | 35.0% | |
| ! | ACAACCATATCCCTTTTAGA+AGG | + | chr5.2:7167429-7167448 | None:intergenic | 35.0% |
| ! | AGTACTTGTTGATGAAGAAG+AGG | - | chr5.2:7167820-7167839 | MS.gene09612:CDS | 35.0% |
| ! | GATGGTTGATATCTTGAATG+AGG | - | chr5.2:7168124-7168143 | MS.gene09612:CDS | 35.0% |
| ! | GTTTATTGGTTGGATTGATG+AGG | - | chr5.2:7168237-7168256 | MS.gene09612:CDS | 35.0% |
| !! | CTTTTAGAAGGCTGATACAT+AGG | + | chr5.2:7167417-7167436 | None:intergenic | 35.0% |
| !! | TGCATTGGTTCAAGAGAAAT+TGG | + | chr5.2:7167633-7167652 | None:intergenic | 35.0% |
| AAGAGGTCTGAAGATGTTCA+AGG | - | chr5.2:7167837-7167856 | MS.gene09612:CDS | 40.0% | |
| AAGTCTCACCATGATAGGTA+TGG | + | chr5.2:7168495-7168514 | None:intergenic | 40.0% | |
| AATCACAAGAAGGAGCTTAG+CGG | + | chr5.2:7168627-7168646 | None:intergenic | 40.0% | |
| AGACTAAAATCAGTTGCACG+CGG | - | chr5.2:7168156-7168175 | MS.gene09612:CDS | 40.0% | |
| AGCTAGAGTTCATGCTTTGA+AGG | - | chr5.2:7167905-7167924 | MS.gene09612:CDS | 40.0% | |
| CAAAGCTCTTGCATAGTTGT+AGG | + | chr5.2:7167738-7167757 | None:intergenic | 40.0% | |
| CAGAACAGTGTGCTTCTATA+AGG | - | chr5.2:7168313-7168332 | MS.gene09612:CDS | 40.0% | |
| CCAACAGCATGTGAAGTAAA+AGG | + | chr5.2:7168020-7168039 | None:intergenic | 40.0% | |
| CTACAACTATGCAAGAGCTT+TGG | - | chr5.2:7167736-7167755 | MS.gene09612:CDS | 40.0% | |
| CTCCTTCTTGTGATTCAAAG+TGG | - | chr5.2:7168632-7168651 | MS.gene09612:CDS | 40.0% | |
| GAGAATGTTGTTCCTCTCAT+AGG | + | chr5.2:7167685-7167704 | None:intergenic | 40.0% | |
| GATATGGTTGTTGGGTATGA+GGG | - | chr5.2:7167438-7167457 | MS.gene09612:CDS | 40.0% | |
| GGGCTAATTCCAAACAATCA+TGG | + | chr5.2:7168406-7168425 | None:intergenic | 40.0% | |
| GTTGATTGTGGTGGTATTGT+AGG | - | chr5.2:7167522-7167541 | MS.gene09612:CDS | 40.0% | |
| TCGTTATCGTCAATACCTGA+AGG | - | chr5.2:7168440-7168459 | MS.gene09612:CDS | 40.0% | |
| TGATGGTCAGATTCTAGATC+TGG | - | chr5.2:7167467-7167486 | MS.gene09612:CDS | 40.0% | |
| TGGTATGGACCATGATTGTT+TGG | - | chr5.2:7168394-7168413 | MS.gene09612:CDS | 40.0% | |
| ! | AAGTGTTGTGTTTGGAGTGA+TGG | + | chr5.2:7167769-7167788 | None:intergenic | 40.0% |
| ! | CCTTTTACTTCACATGCTGT+TGG | - | chr5.2:7168017-7168036 | MS.gene09612:CDS | 40.0% |
| ! | GGAATTAGCCCTTTGTGTTT+TGG | - | chr5.2:7168415-7168434 | MS.gene09612:CDS | 40.0% |
| ! | TATAGAAGCACACTGTTCTG+AGG | + | chr5.2:7168313-7168332 | None:intergenic | 40.0% |
| ! | TCAGCCTTCTAAAAGGGATA+TGG | - | chr5.2:7167422-7167441 | MS.gene09612:CDS | 40.0% |
| ! | TCATGGTGAGACTTTTGATG+AGG | - | chr5.2:7168501-7168520 | MS.gene09612:CDS | 40.0% |
| !! | ATTGTAGGAACTGGTGTTGT+TGG | - | chr5.2:7167537-7167556 | MS.gene09612:CDS | 40.0% |
| !! | GCTGTTGGTTCTGAAGTTAT+TGG | - | chr5.2:7168032-7168051 | MS.gene09612:CDS | 40.0% |
| !! | TGGATTGATGAGGCTTGTTA+AGG | - | chr5.2:7168247-7168266 | MS.gene09612:CDS | 40.0% |
| AAGTCTGTGATTGATGGAGG+TGG | - | chr5.2:7167966-7167985 | MS.gene09612:CDS | 45.0% | |
| AGAGTAACAGGGTCTTGCAT+TGG | + | chr5.2:7167648-7167667 | None:intergenic | 45.0% | |
| ATCGTCAATACCTGAAGGCA+GGG | - | chr5.2:7168445-7168464 | MS.gene09612:CDS | 45.0% | |
| CATAGCAATGGAATCTGTCC+TGG | - | chr5.2:7168278-7168297 | MS.gene09612:CDS | 45.0% | |
| CGTAAGTCTGTGATTGATGG+AGG | - | chr5.2:7167963-7167982 | MS.gene09612:CDS | 45.0% | |
| GAGACACTCAAGAAGGTGAA+GGG | - | chr5.2:7167879-7167898 | MS.gene09612:CDS | 45.0% | |
| GCACGTAAGTCTGTGATTGA+TGG | - | chr5.2:7167960-7167979 | MS.gene09612:CDS | 45.0% | |
| GGATATGGTTGTTGGGTATG+AGG | - | chr5.2:7167437-7167456 | MS.gene09612:CDS | 45.0% | |
| GTCCAGTGCAAAGAGTAACA+GGG | + | chr5.2:7167659-7167678 | None:intergenic | 45.0% | |
| TATCGTCAATACCTGAAGGC+AGG | - | chr5.2:7168444-7168463 | MS.gene09612:CDS | 45.0% | |
| TGGACACAGCTGTGAAAGAT+GGG | - | chr5.2:7167487-7167506 | MS.gene09612:CDS | 45.0% | |
| TGTCCAGTGCAAAGAGTAAC+AGG | + | chr5.2:7167660-7167679 | None:intergenic | 45.0% | |
| TGTGGTGGTATTGTAGGAAC+TGG | - | chr5.2:7167528-7167547 | MS.gene09612:CDS | 45.0% | |
| ! | AGCTGTGAAAGATGGGGTTT+TGG | - | chr5.2:7167494-7167513 | MS.gene09612:CDS | 45.0% |
| ! | GAAGGAGCTTCATCAAGTTG+TGG | - | chr5.2:7167923-7167942 | MS.gene09612:CDS | 45.0% |
| ! | GCTGTGAAAGATGGGGTTTT+GGG | - | chr5.2:7167495-7167514 | MS.gene09612:CDS | 45.0% |
| ! | GGTTCTGGTAAGCTTACACT+TGG | + | chr5.2:7168738-7168757 | None:intergenic | 45.0% |
| !!! | GTTTTGGGTGGTGTTGATTG+TGG | - | chr5.2:7167510-7167529 | MS.gene09612:CDS | 45.0% |
| AGGAAGAGCTTCTGAGCTTG+TGG | - | chr5.2:7167857-7167876 | MS.gene09612:CDS | 50.0% | |
| ATGGTTGTTGGGTATGAGGG+TGG | - | chr5.2:7167441-7167460 | MS.gene09612:CDS | 50.0% | |
| CTGGACACAGCTGTGAAAGA+TGG | - | chr5.2:7167486-7167505 | MS.gene09612:CDS | 50.0% | |
| GACCCTGTTACTCTTTGCAC+TGG | - | chr5.2:7167654-7167673 | MS.gene09612:CDS | 50.0% | |
| GCACTGGACAAACCTATGAG+AGG | - | chr5.2:7167670-7167689 | MS.gene09612:CDS | 50.0% | |
| GCTTGTGGAGACACTCAAGA+AGG | - | chr5.2:7167872-7167891 | MS.gene09612:CDS | 50.0% | |
| GGACACAGCTGTGAAAGATG+GGG | - | chr5.2:7167488-7167507 | MS.gene09612:CDS | 50.0% | |
| GGAGACACTCAAGAAGGTGA+AGG | - | chr5.2:7167878-7167897 | MS.gene09612:CDS | 50.0% | |
| TTCAAAGCTACCCTGCCTTC+AGG | + | chr5.2:7168458-7168477 | None:intergenic | 50.0% | |
| !! | AGAAGCACACTGTTCTGAGG+AGG | + | chr5.2:7168310-7168329 | None:intergenic | 50.0% |
| !! | GTTCTGAGGAGGCTTAATCC+AGG | + | chr5.2:7168299-7168318 | None:intergenic | 50.0% |
| !! | TGAAGGCAGGGTAGCTTTGA+AGG | - | chr5.2:7168457-7168476 | MS.gene09612:CDS | 50.0% |
| !! | TTGGGTGGTGTTGATTGTGG+TGG | - | chr5.2:7167513-7167532 | MS.gene09612:CDS | 50.0% |
| !!! | GTGAAAGATGGGGTTTTGGG+TGG | - | chr5.2:7167498-7167517 | MS.gene09612:CDS | 50.0% |
| GCAATCGACGAACACTCCTC+GGG | + | chr5.2:7168587-7168606 | None:intergenic | 55.0% | |
| GGCAATCGACGAACACTCCT+CGG | + | chr5.2:7168588-7168607 | None:intergenic | 55.0% | |
| GTTGTTGGGTATGAGGGTGG+TGG | - | chr5.2:7167444-7167463 | MS.gene09612:CDS | 55.0% | |
| ! | CGTCGATTGCCGTTGATGCA+GGG | - | chr5.2:7168597-7168616 | MS.gene09612:CDS | 55.0% |
| ! | TCGTCGATTGCCGTTGATGC+AGG | - | chr5.2:7168596-7168615 | MS.gene09612:CDS | 55.0% |
| AGCGGCAAGCCCTGCATCAA+CGG | + | chr5.2:7168609-7168628 | None:intergenic | 60.0% | |
| TGTTTGCAAGCTCGCACCCG+AGG | - | chr5.2:7168568-7168587 | MS.gene09612:CDS | 60.0% | |
| ! | GGGTATGAGGGTGGTGGTGA+TGG | - | chr5.2:7167450-7167469 | MS.gene09612:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 7167411 | 7168766 | 7167411 | ID=MS.gene09612 |
| chr5.2 | mRNA | 7167411 | 7168766 | 7167411 | ID=MS.gene09612.t1;Parent=MS.gene09612 |
| chr5.2 | exon | 7167411 | 7168766 | 7167411 | ID=MS.gene09612.t1.exon1;Parent=MS.gene09612.t1 |
| chr5.2 | CDS | 7167411 | 7168766 | 7167411 | ID=cds.MS.gene09612.t1;Parent=MS.gene09612.t1 |
| Gene Sequence |
| Protein sequence |
