Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20292.t1 | XP_003611589.2 | 96.3 | 1260 | 47 | 0 | 1 | 1260 | 1 | 1260 | 0.00E+00 | 2269.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20292.t1 | Q2TAW0 | 34.0 | 438 | 285 | 4 | 150 | 584 | 135 | 571 | 8.9e-67 | 257.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20292.t1 | G7K2J6 | 96.3 | 1260 | 47 | 0 | 1 | 1260 | 1 | 1260 | 0.0e+00 | 2269.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene20292 | 0.801003 | 1.11E-48 | -1.69E-46 |
| MS.gene049989 | MS.gene20292 | 0.838914 | 2.17E-57 | -1.69E-46 |
| MS.gene050297 | MS.gene20292 | 0.817993 | 2.47E-52 | -1.69E-46 |
| MS.gene051629 | MS.gene20292 | 0.805158 | 1.53E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene20292 | 0.80571 | 1.17E-49 | -1.69E-46 |
| MS.gene051955 | MS.gene20292 | 0.811025 | 8.61E-51 | -1.69E-46 |
| MS.gene052367 | MS.gene20292 | 0.845788 | 3.26E-59 | -1.69E-46 |
| MS.gene053348 | MS.gene20292 | 0.812505 | 4.10E-51 | -1.69E-46 |
| MS.gene053416 | MS.gene20292 | 0.825785 | 3.88E-54 | -1.69E-46 |
| MS.gene053417 | MS.gene20292 | 0.823775 | 1.15E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene20292 | 0.800713 | 1.27E-48 | -1.69E-46 |
| MS.gene054593 | MS.gene20292 | 0.809713 | 1.65E-50 | -1.69E-46 |
| MS.gene055308 | MS.gene20292 | 0.824675 | 7.10E-54 | -1.69E-46 |
| MS.gene055578 | MS.gene20292 | 0.812917 | 3.33E-51 | -1.69E-46 |
| MS.gene055957 | MS.gene20292 | 0.827313 | 1.68E-54 | -1.69E-46 |
| MS.gene056041 | MS.gene20292 | 0.859742 | 3.35E-63 | -1.69E-46 |
| MS.gene05640 | MS.gene20292 | 0.822139 | 2.78E-53 | -1.69E-46 |
| MS.gene056526 | MS.gene20292 | 0.824537 | 7.65E-54 | -1.69E-46 |
| MS.gene058196 | MS.gene20292 | 0.814583 | 1.43E-51 | -1.69E-46 |
| MS.gene059300 | MS.gene20292 | 0.808531 | 2.96E-50 | -1.69E-46 |
| MS.gene059553 | MS.gene20292 | 0.805674 | 1.19E-49 | -1.69E-46 |
| MS.gene060473 | MS.gene20292 | 0.860296 | 2.28E-63 | -1.69E-46 |
| MS.gene060565 | MS.gene20292 | 0.855061 | 8.12E-62 | -1.69E-46 |
| MS.gene06057 | MS.gene20292 | 0.817328 | 3.49E-52 | -1.69E-46 |
| MS.gene06093 | MS.gene20292 | 0.827362 | 1.63E-54 | -1.69E-46 |
| MS.gene061099 | MS.gene20292 | 0.823367 | 1.44E-53 | -1.69E-46 |
| MS.gene061260 | MS.gene20292 | 0.839786 | 1.29E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20292.t1 | MTR_5g015600 | 96.667 | 1260 | 42 | 0 | 1 | 1260 | 1 | 1260 | 0.0 | 2499 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20292.t1 | AT1G64960 | 50.673 | 1263 | 584 | 9 | 1 | 1258 | 1 | 1229 | 0.0 | 1139 |
| MS.gene20292.t1 | AT1G64960 | 49.802 | 1263 | 566 | 9 | 1 | 1258 | 1 | 1200 | 0.0 | 1103 |
Find 241 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCGTTGTCACATTAAATT+TGG | 0.118138 | 5.1:-8050902 | MS.gene20292:CDS |
| GTAAGCATCTTTGTTATAAT+TGG | 0.182037 | 5.1:+8051879 | None:intergenic |
| GCTACAATCAAGGGCCATTT+TGG | 0.186330 | 5.1:+8048498 | None:intergenic |
| GTCGTGTCCTTCATCTATTT+TGG | 0.194615 | 5.1:-8051917 | MS.gene20292:CDS |
| ACATAAGTTGTTGCTTTCTT+TGG | 0.204410 | 5.1:-8050978 | MS.gene20292:CDS |
| AATTAAATCAAGCAAGTTAT+TGG | 0.209359 | 5.1:+8048689 | None:intergenic |
| GAATGCTTTGCATCTGCTTT+TGG | 0.221348 | 5.1:-8052075 | MS.gene20292:CDS |
| AGGGTTTGATTGAATGAATT+AGG | 0.240634 | 5.1:+8053545 | None:intergenic |
| AGAAGTCCTGCCACATTATC+TGG | 0.262209 | 5.1:+8051079 | None:intergenic |
| TGAAGTTACAATTTCCAAAA+TGG | 0.266674 | 5.1:-8048512 | MS.gene20292:CDS |
| CGGCGGAGGGTGGCGGTGGG+AGG | 0.270236 | 5.1:+8053412 | None:intergenic |
| AAGTCGATGTTGGAGGCTTA+TGG | 0.282924 | 5.1:-8052836 | MS.gene20292:CDS |
| TTCTTGGTTTGTTCACTTGT+TGG | 0.284764 | 5.1:-8048327 | MS.gene20292:CDS |
| TTTGTATATTAGAAGGGTTT+TGG | 0.286758 | 5.1:-8052696 | MS.gene20292:CDS |
| AGGGGTTGCTTGAACCTCTT+TGG | 0.288614 | 5.1:-8048116 | MS.gene20292:CDS |
| TTGGCTGCCTGATGTAGTTT+TGG | 0.290932 | 5.1:-8048604 | MS.gene20292:CDS |
| TTGAATGTCGAGAATTTATC+TGG | 0.295429 | 5.1:+8048420 | None:intergenic |
| GCATGATAATTTGATTGTTT+TGG | 0.298824 | 5.1:-8053221 | MS.gene20292:CDS |
| AGATCTAAAGATTGCTTTCC+TGG | 0.301662 | 5.1:+8050706 | None:intergenic |
| AGAGCGGCGGAGGGTGGCGG+TGG | 0.302209 | 5.1:+8053408 | None:intergenic |
| AGAAGATGGAAGAAAGTTTC+TGG | 0.302676 | 5.1:-8052936 | MS.gene20292:CDS |
| CATAAGTTGTTGCTTTCTTT+GGG | 0.303041 | 5.1:-8050977 | MS.gene20292:CDS |
| ATTCCACTCCTTGAATCTTC+TGG | 0.303771 | 5.1:+8052782 | None:intergenic |
| TGTTTCAACTGAATCATGTT+TGG | 0.303846 | 5.1:-8048667 | MS.gene20292:CDS |
| CATAGACATATCTCCTGTTT+TGG | 0.310009 | 5.1:-8050606 | MS.gene20292:CDS |
| GATTGGCGATCAACATCTTC+AGG | 0.310014 | 5.1:+8051016 | None:intergenic |
| GGTTCTATCCATGCAAGTTC+TGG | 0.311947 | 5.1:-8052728 | MS.gene20292:CDS |
| ATCGTTGTCACATTAAATTT+GGG | 0.311953 | 5.1:-8050901 | MS.gene20292:CDS |
| AAAATCAAAATTCCACAAAA+AGG | 0.312821 | 5.1:-8049619 | MS.gene20292:CDS |
| GGTCAAAGCATTCTTGAGTT+TGG | 0.317159 | 5.1:-8051308 | MS.gene20292:CDS |
| TCTTGGTTTGTTCACTTGTT+GGG | 0.323357 | 5.1:-8048326 | MS.gene20292:CDS |
| CACTGCAGAGAGCACAGTTT+TGG | 0.325243 | 5.1:+8048476 | None:intergenic |
| GGAAGAGCGGCGGAGGGTGG+CGG | 0.326211 | 5.1:+8053405 | None:intergenic |
| TTGATCGCCAATCTAAAATT+AGG | 0.330348 | 5.1:-8051006 | MS.gene20292:CDS |
| ACAGCAATTGTTCTAACTTC+TGG | 0.331484 | 5.1:+8051951 | None:intergenic |
| ACTGGGTTCGGTGGTGGTGG+TGG | 0.345101 | 5.1:+8053372 | None:intergenic |
| TCAGCTTGGGAAGGAGCTTT+TGG | 0.349604 | 5.1:-8052891 | MS.gene20292:CDS |
| ATCTGATTGGGAACTGGGTT+CGG | 0.352496 | 5.1:+8053360 | None:intergenic |
| GTTTCAACTGAATCATGTTT+GGG | 0.353872 | 5.1:-8048666 | MS.gene20292:CDS |
| ATTTGAAACTGTTGTTAAAC+AGG | 0.356426 | 5.1:-8052988 | MS.gene20292:CDS |
| AAAGTGGAAGGTTTACTAAC+TGG | 0.356693 | 5.1:-8051157 | MS.gene20292:CDS |
| GAGAAATTGATGCATGTAAA+GGG | 0.356739 | 5.1:-8048135 | MS.gene20292:CDS |
| GGGTTTGATTGAATGAATTA+GGG | 0.357688 | 5.1:+8053546 | None:intergenic |
| GGGTGGCGGTGGGAGGGGTT+TGG | 0.362193 | 5.1:+8053419 | None:intergenic |
| AATTGAGAATGGGTTCTTGC+AGG | 0.370908 | 5.1:-8052762 | MS.gene20292:CDS |
| CATAACTTGGAGTCAACAAC+TGG | 0.378416 | 5.1:-8049680 | MS.gene20292:CDS |
| ACAGTGTTACAGCTACTAAA+AGG | 0.379156 | 5.1:-8050862 | MS.gene20292:CDS |
| AGTCAGTGAACCATGCTATA+TGG | 0.381458 | 5.1:-8051209 | MS.gene20292:CDS |
| TAAGGTGCTCTGTCCAAGAC+TGG | 0.381805 | 5.1:-8051751 | MS.gene20292:CDS |
| GCTGCATTACACTAGTAAAA+AGG | 0.383645 | 5.1:-8051405 | MS.gene20292:CDS |
| CAATGTGGATTCACATAACT+TGG | 0.384118 | 5.1:-8049693 | MS.gene20292:CDS |
| CTTATGCAGCAGGGTTGTTA+AGG | 0.385515 | 5.1:+8050931 | None:intergenic |
| GCGGAGGGTGGCGGTGGGAG+GGG | 0.386179 | 5.1:+8053414 | None:intergenic |
| TTCTTGCAGGATTTGATTGA+GGG | 0.387600 | 5.1:-8052749 | MS.gene20292:CDS |
| AGGGAGTGAAGAAATGAGAT+TGG | 0.390904 | 5.1:+8053519 | None:intergenic |
| AAGGACTTTGAGCTGGCATT+AGG | 0.391101 | 5.1:-8048294 | MS.gene20292:CDS |
| TAAATGTTCACTTCCACTTT+CGG | 0.391923 | 5.1:+8048551 | None:intergenic |
| CTCGACATTCAATAAACTTA+CGG | 0.392019 | 5.1:-8048409 | MS.gene20292:CDS |
| ACGTATCATCTATATGAAAC+TGG | 0.400632 | 5.1:-8048093 | MS.gene20292:CDS |
| TGACATGATGTTATCTTCTC+TGG | 0.402253 | 5.1:-8048217 | MS.gene20292:CDS |
| TTGAGGCATCGGGATCTTCA+AGG | 0.407230 | 5.1:+8052042 | None:intergenic |
| TACTGCTGTTCTGAAGTTCA+TGG | 0.407356 | 5.1:-8048964 | MS.gene20292:CDS |
| CTGCAGTAAGTAACTCTTTG+AGG | 0.407497 | 5.1:+8051182 | None:intergenic |
| GGAACTGGGTTCGGTGGTGG+TGG | 0.410008 | 5.1:+8053369 | None:intergenic |
| TTTGTTAGCTTCTGAGCTAC+AGG | 0.413385 | 5.1:+8051484 | None:intergenic |
| CAAAATATTGCACCGGCCAT+TGG | 0.415212 | 5.1:+8051379 | None:intergenic |
| CCACTCTCATGAAGTCCTTA+AGG | 0.418852 | 5.1:-8051769 | MS.gene20292:CDS |
| TTGCCGAGCCAGTCATATTT+CGG | 0.420764 | 5.1:-8052619 | MS.gene20292:CDS |
| AGCGTCTAAAACTCATCTTA+TGG | 0.421060 | 5.1:-8051335 | MS.gene20292:CDS |
| CTTAACAACCCTGCTGCATA+AGG | 0.424511 | 5.1:-8050930 | MS.gene20292:CDS |
| AGAGTATAATAGATGCAGTT+GGG | 0.424724 | 5.1:-8048356 | MS.gene20292:CDS |
| TAATCGTGATGACAGGGATT+GGG | 0.424973 | 5.1:-8048241 | MS.gene20292:CDS |
| TCAAGGAGTGGAATTGAGAA+TGG | 0.425285 | 5.1:-8052773 | MS.gene20292:CDS |
| AGCTAGTAATAACGATGAAC+TGG | 0.425908 | 5.1:-8048157 | MS.gene20292:CDS |
| TAAAACTCATCTTATGGAAC+TGG | 0.430233 | 5.1:-8051329 | MS.gene20292:CDS |
| AGTCGATGTTGGAGGCTTAT+GGG | 0.430569 | 5.1:-8052835 | MS.gene20292:CDS |
| GGCGGAGGGTGGCGGTGGGA+GGG | 0.435084 | 5.1:+8053413 | None:intergenic |
| ATGCGTTTCGCATCCGAGAA+AGG | 0.435129 | 5.1:-8053284 | MS.gene20292:CDS |
| AGGCTATCTCTGACAAATGC+TGG | 0.441732 | 5.1:-8049593 | MS.gene20292:CDS |
| GAAATCAACGATTCGCGCTC+CGG | 0.444636 | 5.1:+8053133 | None:intergenic |
| TCATGCAATGCTTGAACTCC+AGG | 0.448812 | 5.1:+8053238 | None:intergenic |
| CGATGCCTCAAAAGAGGATA+AGG | 0.452469 | 5.1:-8052030 | MS.gene20292:CDS |
| CAATAAACTTACGGCTATGC+TGG | 0.453081 | 5.1:-8048400 | MS.gene20292:CDS |
| ATATCTTGTCTTCATTGAAC+CGG | 0.453751 | 5.1:-8048866 | MS.gene20292:CDS |
| CAGAATTGAATTTGAGGAAG+AGG | 0.455907 | 5.1:-8048832 | MS.gene20292:CDS |
| CTCCTCAATGGGCACTATTG+AGG | 0.456844 | 5.1:+8051438 | None:intergenic |
| GTTACTTACTGCAGAGAAAG+TGG | 0.458246 | 5.1:-8051173 | MS.gene20292:CDS |
| CCCAGTGCCAAAACTACATC+AGG | 0.461018 | 5.1:+8048597 | None:intergenic |
| CGATTACATGCCTCCTCAAT+GGG | 0.461846 | 5.1:+8051427 | None:intergenic |
| GCGATTACATGCCTCCTCAA+TGG | 0.462529 | 5.1:+8051426 | None:intergenic |
| TCCTCAATGGGCACTATTGA+GGG | 0.465738 | 5.1:+8051439 | None:intergenic |
| TTATATTTGAAAACAGAAGA+TGG | 0.467998 | 5.1:-8052950 | MS.gene20292:CDS |
| CGAGCACGTGCTCAACTGCT+TGG | 0.468749 | 5.1:-8049753 | MS.gene20292:CDS |
| ATCAGGCAGCCAAGGCTTTG+CGG | 0.469242 | 5.1:+8048614 | None:intergenic |
| ACTTGTTGGGCTAGAACAAA+AGG | 0.469593 | 5.1:-8048313 | MS.gene20292:CDS |
| AAGTCAGCATTGAGCATTGT+GGG | 0.469732 | 5.1:-8050640 | MS.gene20292:CDS |
| TGAAGAAATGAGATTGGAAG+AGG | 0.470796 | 5.1:+8053525 | None:intergenic |
| AGTTGTTTAATCGTGATGAC+AGG | 0.474192 | 5.1:-8048248 | MS.gene20292:CDS |
| TTGTTGCAGCCGCAAAGCCT+TGG | 0.475384 | 5.1:-8048623 | MS.gene20292:CDS |
| GTTAGAACAATTGCTGTTGA+GGG | 0.477109 | 5.1:-8051945 | MS.gene20292:CDS |
| TTGGGAACTGGGTTCGGTGG+TGG | 0.478804 | 5.1:+8053366 | None:intergenic |
| ATGGATTCGTAGAGAGAGGG+AGG | 0.479474 | 5.1:+8053499 | None:intergenic |
| GTTCTACAACACACCGAAAG+TGG | 0.479507 | 5.1:-8048564 | MS.gene20292:CDS |
| AGGGTCATATATGCCAAAAC+AGG | 0.480115 | 5.1:+8050593 | None:intergenic |
| GTTCTTGCAGGATTTGATTG+AGG | 0.481339 | 5.1:-8052750 | MS.gene20292:CDS |
| TTGGGTTGAGTGATCAGCTT+GGG | 0.484657 | 5.1:-8052904 | MS.gene20292:CDS |
| ATTAATCAGAGGACCGTTGA+TGG | 0.485600 | 5.1:-8052665 | MS.gene20292:CDS |
| GATAGGCAGCCTTATGCAGC+AGG | 0.485936 | 5.1:+8050921 | None:intergenic |
| GGAGAAATTGATGCATGTAA+AGG | 0.487328 | 5.1:-8048136 | MS.gene20292:CDS |
| AGCATTAAGTGACCCAGTCT+TGG | 0.488311 | 5.1:+8051738 | None:intergenic |
| GTCTTGGACAGAGCACCTTA+AGG | 0.488423 | 5.1:+8051754 | None:intergenic |
| ATGATGTATGCAACGAGGTA+AGG | 0.489515 | 5.1:-8051833 | MS.gene20292:CDS |
| AACGATCTCGATAGAACAAA+AGG | 0.490167 | 5.1:+8053100 | None:intergenic |
| GTAAGGCTTTCTACGTTGAA+TGG | 0.490296 | 5.1:-8051816 | MS.gene20292:CDS |
| ATCTTTGTTATAATTGGTGA+CGG | 0.493361 | 5.1:+8051885 | None:intergenic |
| GGATTGAATTGTGGTGGTGA+TGG | 0.498059 | 5.1:+8053480 | None:intergenic |
| TGAGGCATCGGGATCTTCAA+GGG | 0.498223 | 5.1:+8052043 | None:intergenic |
| CAACATCGACTTCCGTCCAT+AGG | 0.498800 | 5.1:+8052847 | None:intergenic |
| GCGGGAAGAGCGGCGGAGGG+TGG | 0.498932 | 5.1:+8053402 | None:intergenic |
| TCATCACAGAATTGAATTTG+AGG | 0.499129 | 5.1:-8048838 | MS.gene20292:CDS |
| TGCAGTAAGTAACTCTTTGA+GGG | 0.500623 | 5.1:+8051183 | None:intergenic |
| AAGAGTATAATAGATGCAGT+TGG | 0.504058 | 5.1:-8048357 | MS.gene20292:CDS |
| GCTGAATGCAGATCAGATAG+AGG | 0.504242 | 5.1:-8051269 | MS.gene20292:CDS |
| AGTTAGAACAATTGCTGTTG+AGG | 0.504585 | 5.1:-8051946 | MS.gene20292:CDS |
| GGTGATGGATTCGTAGAGAG+AGG | 0.505660 | 5.1:+8053495 | None:intergenic |
| ATTCGTTCGCAGATTCCCTA+TGG | 0.510482 | 5.1:-8052863 | MS.gene20292:CDS |
| AGTCATATTTCGGTCTCTGC+AGG | 0.512308 | 5.1:-8052609 | MS.gene20292:intron |
| GGGATATATTGTTTCGAGCA+TGG | 0.517339 | 5.1:-8052814 | MS.gene20292:CDS |
| TTAATCGTGATGACAGGGAT+TGG | 0.517973 | 5.1:-8048242 | MS.gene20292:CDS |
| CAAGGAGTGGAATTGAGAAT+GGG | 0.519108 | 5.1:-8052772 | MS.gene20292:CDS |
| TGCTTCAGCATGAGGATACC+AGG | 0.519304 | 5.1:-8050724 | MS.gene20292:CDS |
| CAACCGTCATTTGCAGAGCA+AGG | 0.521212 | 5.1:+8050573 | None:intergenic |
| CGATTCGAGAAGATTGAGGA+AGG | 0.522090 | 5.1:+8053459 | None:intergenic |
| TTAATCAGAGGACCGTTGAT+GGG | 0.523772 | 5.1:-8052664 | MS.gene20292:CDS |
| AAGTGGAAGGTTTACTAACT+GGG | 0.525292 | 5.1:-8051156 | MS.gene20292:CDS |
| AAGACTGGGTCACTTAATGC+TGG | 0.526089 | 5.1:-8051736 | MS.gene20292:CDS |
| AATGTGATACTGACTGATTC+CGG | 0.528013 | 5.1:-8048750 | MS.gene20292:CDS |
| TTCTTCTACATTACTTTCAG+AGG | 0.530469 | 5.1:-8050489 | MS.gene20292:intron |
| GTCATCACGATTAAACAACT+TGG | 0.532544 | 5.1:+8048251 | None:intergenic |
| AAGCTGTGCCAGAAGATTCA+AGG | 0.532592 | 5.1:-8052790 | MS.gene20292:CDS |
| ACCTCAACAAGTGCTTTGTA+AGG | 0.535761 | 5.1:-8048997 | MS.gene20292:CDS |
| TGTTCGATTCGAGAAGATTG+AGG | 0.537356 | 5.1:+8053455 | None:intergenic |
| AAGTTGTTGCTTTCTTTGGG+AGG | 0.538403 | 5.1:-8050974 | MS.gene20292:CDS |
| CAAGTTATTGGCAAGAGTGA+AGG | 0.539764 | 5.1:+8048701 | None:intergenic |
| TGCAAGTATGCCATCTCGGA+AGG | 0.539958 | 5.1:-8051358 | MS.gene20292:CDS |
| CAAAAGTTCCAGAACTTGCA+TGG | 0.542061 | 5.1:+8052720 | None:intergenic |
| ATGGTGGAAGGAGAATTTAC+CGG | 0.542800 | 5.1:-8053152 | MS.gene20292:CDS |
| AAAAGAATGGTGATTCCAAA+GGG | 0.545378 | 5.1:-8050529 | MS.gene20292:CDS |
| GATGATTATTTAGTAGCTGT+AGG | 0.545384 | 5.1:-8050770 | MS.gene20292:CDS |
| GAAGAAATGAGATTGGAAGA+GGG | 0.546308 | 5.1:+8053526 | None:intergenic |
| CTTAAGGACTTCATGAGAGT+GGG | 0.547100 | 5.1:+8051770 | None:intergenic |
| GAAAAGAATGGTGATTCCAA+AGG | 0.547520 | 5.1:-8050530 | MS.gene20292:CDS |
| CAATTCTGTGATGATACAGC+CGG | 0.547592 | 5.1:+8048847 | None:intergenic |
| GAGCGGCGGAGGGTGGCGGT+GGG | 0.547858 | 5.1:+8053409 | None:intergenic |
| AATCGTGATGACAGGGATTG+GGG | 0.550245 | 5.1:-8048240 | MS.gene20292:CDS |
| AAATTTAATGTGACAACGAT+AGG | 0.550315 | 5.1:+8050904 | None:intergenic |
| TAGAGACTTGCTTCAGCATG+AGG | 0.551742 | 5.1:-8050732 | MS.gene20292:CDS |
| AACATCGACTTCCGTCCATA+GGG | 0.552815 | 5.1:+8052848 | None:intergenic |
| TGGACGGAAGTCGATGTTGG+AGG | 0.554425 | 5.1:-8052843 | MS.gene20292:CDS |
| TTGAGACTATATGTGAAGAA+TGG | 0.555953 | 5.1:-8053171 | MS.gene20292:CDS |
| TTTGCGGGAAGAGCGGCGGA+GGG | 0.556140 | 5.1:+8053399 | None:intergenic |
| CCTCACAGTACAAGTTGCTA+TGG | 0.556604 | 5.1:-8051706 | MS.gene20292:CDS |
| TTTAGACGCTCCTTCCGAGA+TGG | 0.560520 | 5.1:+8051348 | None:intergenic |
| CACTGTTTGTCCAGATAATG+TGG | 0.561270 | 5.1:-8051089 | MS.gene20292:CDS |
| AGATCCCGATGCCTCAAAAG+AGG | 0.561369 | 5.1:-8052036 | MS.gene20292:CDS |
| ATTGAGGAAGGATTGAATTG+TGG | 0.561575 | 5.1:+8053471 | None:intergenic |
| GTGATGGATTCGTAGAGAGA+GGG | 0.563564 | 5.1:+8053496 | None:intergenic |
| TAATTTCCCAAAATAGATGA+AGG | 0.566722 | 5.1:+8051910 | None:intergenic |
| CTATGGACGGAAGTCGATGT+TGG | 0.567954 | 5.1:-8052846 | MS.gene20292:CDS |
| AGACCGAAATATGACTGGCT+CGG | 0.567968 | 5.1:+8052616 | None:intergenic |
| TCCCTCAATAGTGCCCATTG+AGG | 0.568869 | 5.1:-8051440 | MS.gene20292:CDS |
| TGGGAGGGTTTATTAATCAG+AGG | 0.569490 | 5.1:-8052676 | MS.gene20292:CDS |
| GTCGATGTTGGAGGCTTATG+GGG | 0.569573 | 5.1:-8052834 | MS.gene20292:CDS |
| GGCTATCTCTGACAAATGCT+GGG | 0.569692 | 5.1:-8049592 | MS.gene20292:CDS |
| GTGCTCTCTGCAGTGAATGA+AGG | 0.573610 | 5.1:-8048468 | MS.gene20292:CDS |
| GTTAGCTTCTGAGCTACAGG+AGG | 0.579964 | 5.1:+8051487 | None:intergenic |
| GTTTGTCCAGATAATGTGGC+AGG | 0.581670 | 5.1:-8051085 | MS.gene20292:CDS |
| TGCAGAGACCGAAATATGAC+TGG | 0.581828 | 5.1:+8052611 | None:intergenic |
| AAAACTACATCAGGCAGCCA+AGG | 0.582232 | 5.1:+8048606 | None:intergenic |
| AATGCTGGGTACCCAAGTAA+TGG | 0.583247 | 5.1:-8049578 | MS.gene20292:CDS |
| AGAACAAAAGGACTTTGAGC+TGG | 0.584523 | 5.1:-8048301 | MS.gene20292:CDS |
| TTTAGTAGCTGTAACACTGT+GGG | 0.585322 | 5.1:+8050865 | None:intergenic |
| CTTACTGCAGAGAAAGTGGA+AGG | 0.585811 | 5.1:-8051169 | MS.gene20292:CDS |
| GTTCGCAGATTCCCTATGGA+CGG | 0.586714 | 5.1:-8052859 | MS.gene20292:CDS |
| TGATTGGGAACTGGGTTCGG+TGG | 0.588383 | 5.1:+8053363 | None:intergenic |
| CTCAATAGTGCCCATTGAGG+AGG | 0.589147 | 5.1:-8051437 | MS.gene20292:CDS |
| CCTTAAGGACTTCATGAGAG+TGG | 0.589374 | 5.1:+8051769 | None:intergenic |
| GAGTATAATAGATGCAGTTG+GGG | 0.592861 | 5.1:-8048355 | MS.gene20292:CDS |
| GTTGTTTAATCGTGATGACA+GGG | 0.593151 | 5.1:-8048247 | MS.gene20292:CDS |
| AGCTACAGGAGGTTGATCAC+TGG | 0.593278 | 5.1:+8051498 | None:intergenic |
| TTGAGGGCATCCATATAGCA+TGG | 0.595418 | 5.1:+8051199 | None:intergenic |
| AGACTATATGTGAAGAATGG+TGG | 0.596012 | 5.1:-8053168 | MS.gene20292:CDS |
| AAGAATAATCCATTGTTGTG+AGG | 0.596859 | 5.1:+8048915 | None:intergenic |
| TAGTAGCTGTAGGAGTTGCA+TGG | 0.597500 | 5.1:-8050760 | MS.gene20292:CDS |
| CTGAATGCAGATCAGATAGA+GGG | 0.598250 | 5.1:-8051268 | MS.gene20292:CDS |
| GAGGCATCGGGATCTTCAAG+GGG | 0.599155 | 5.1:+8052044 | None:intergenic |
| TGTCATTATGGAGGATCCAC+CGG | 0.599171 | 5.1:+8048731 | None:intergenic |
| ACCTTACAAAGCACTTGTTG+AGG | 0.600071 | 5.1:+8048996 | None:intergenic |
| TTTGGGTTGAGTGATCAGCT+TGG | 0.601001 | 5.1:-8052905 | MS.gene20292:CDS |
| AAGGTGCTCTGTCCAAGACT+GGG | 0.602746 | 5.1:-8051750 | MS.gene20292:CDS |
| TATATGTGAAGAATGGTGGA+AGG | 0.602831 | 5.1:-8053164 | MS.gene20292:CDS |
| TAATCAGAGGACCGTTGATG+GGG | 0.604531 | 5.1:-8052663 | MS.gene20292:CDS |
| AACCGTCATTTGCAGAGCAA+GGG | 0.604605 | 5.1:+8050574 | None:intergenic |
| AAATCTATCATAAGATAGAG+AGG | 0.605785 | 5.1:-8048191 | MS.gene20292:CDS |
| TGGATTCGTAGAGAGAGGGA+GGG | 0.607728 | 5.1:+8053500 | None:intergenic |
| TCATCTATATGAAACTGGAA+AGG | 0.612001 | 5.1:-8048088 | MS.gene20292:CDS |
| GTGCCAGAAGATTCAAGGAG+TGG | 0.612532 | 5.1:-8052785 | MS.gene20292:CDS |
| GACCCTTGCTCTGCAAATGA+CGG | 0.615907 | 5.1:-8050576 | MS.gene20292:CDS |
| TCGTTGTCACATTAAATTTG+GGG | 0.617087 | 5.1:-8050900 | MS.gene20292:CDS |
| ATACTTGCAAAATATTGCAC+CGG | 0.617576 | 5.1:+8051372 | None:intergenic |
| GTTGAGTGATCAGCTTGGGA+AGG | 0.621002 | 5.1:-8052900 | MS.gene20292:CDS |
| TATAGATGATACGTCCAAAG+AGG | 0.623631 | 5.1:+8048102 | None:intergenic |
| AGGAGCAAAACACATGGCAG+TGG | 0.623835 | 5.1:+8048935 | None:intergenic |
| CACATTATCTGGACAAACAG+TGG | 0.625302 | 5.1:+8051090 | None:intergenic |
| TCTGCAGTGAATGAAGGTGA+AGG | 0.629597 | 5.1:-8048462 | MS.gene20292:CDS |
| TAGTTTCTCAACCCCATCAA+CGG | 0.629952 | 5.1:+8052652 | None:intergenic |
| TTCGAAGTCAAACAACGCGA+AGG | 0.636487 | 5.1:+8053027 | None:intergenic |
| CAAATGACGGTTGATAATGT+TGG | 0.639424 | 5.1:-8050563 | MS.gene20292:CDS |
| GAGGAAGGATTGAATTGTGG+TGG | 0.641780 | 5.1:+8053474 | None:intergenic |
| GTGAATGAAGGTGAAGGAGA+TGG | 0.646473 | 5.1:-8048456 | MS.gene20292:CDS |
| TTAAGGACTTCATGAGAGTG+GGG | 0.647165 | 5.1:+8051771 | None:intergenic |
| TAGGGTTTATATGTTTCGCG+AGG | 0.654308 | 5.1:-8053050 | MS.gene20292:CDS |
| GCTGGGTACCCAAGTAATGG+AGG | 0.655722 | 5.1:-8049575 | MS.gene20292:intron |
| CTTCGAAGATGAGAGTATCG+AGG | 0.656364 | 5.1:-8053011 | MS.gene20292:CDS |
| AGTGTTGTCACAAACTGCCA+TGG | 0.660349 | 5.1:-8051043 | MS.gene20292:CDS |
| GAAGTCAGCATTGAGCATTG+TGG | 0.665576 | 5.1:-8050641 | MS.gene20292:CDS |
| CAACATCTTCAGGTAAACCA+TGG | 0.669355 | 5.1:+8051026 | None:intergenic |
| GGCACAAGTAGTGAAAAGAA+TGG | 0.672314 | 5.1:-8050542 | MS.gene20292:CDS |
| GTAGCTGTAACACTGTGGGA+TGG | 0.675445 | 5.1:+8050869 | None:intergenic |
| CACTGTACAATATCACAATG+TGG | 0.676395 | 5.1:-8049708 | MS.gene20292:CDS |
| ATAACTTGGAGTCAACAACT+GGG | 0.682337 | 5.1:-8049679 | MS.gene20292:CDS |
| AGGCATCGGGATCTTCAAGG+GGG | 0.688549 | 5.1:+8052045 | None:intergenic |
| AGTGGAAGGTTTACTAACTG+GGG | 0.692191 | 5.1:-8051155 | MS.gene20292:CDS |
| GCTAAAGAGATGAATTCTTG+TGG | 0.699935 | 5.1:+8053610 | None:intergenic |
| ACTATTGAGGGAAAGTACGA+AGG | 0.710367 | 5.1:+8051451 | None:intergenic |
| GTTGTGAGGAGCAAAACACA+TGG | 0.711346 | 5.1:+8048929 | None:intergenic |
| ATAGGCAGCCTTATGCAGCA+GGG | 0.712099 | 5.1:+8050922 | None:intergenic |
| GTGATACTGACTGATTCCGG+TGG | 0.713602 | 5.1:-8048747 | MS.gene20292:CDS |
| CCATAGCAACTTGTACTGTG+AGG | 0.720086 | 5.1:+8051706 | None:intergenic |
| AGAAATTGATGCATGTAAAG+GGG | 0.733317 | 5.1:-8048134 | MS.gene20292:CDS |
| GTCTCATGATGTATGCAACG+AGG | 0.768233 | 5.1:-8051838 | MS.gene20292:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATAATTTTGTTCTAAA+AGG | - | chr5.1:8052309-8052328 | MS.gene20292:intron | 10.0% |
| !!! | GTTTTCTTTTTATAAAAAAA+AGG | - | chr5.1:8049438-8049457 | MS.gene20292:intron | 10.0% |
| !! | TATACATATTGTAGTTATAA+TGG | - | chr5.1:8052184-8052203 | MS.gene20292:intron | 15.0% |
| !!! | AATTTTGAATATCATTTAGA+TGG | + | chr5.1:8050041-8050060 | None:intergenic | 15.0% |
| !!! | ATCACTTTTATGAAAATTTA+AGG | + | chr5.1:8049260-8049279 | None:intergenic | 15.0% |
| !! | AAAATCAAAATTCCACAAAA+AGG | - | chr5.1:8052089-8052108 | MS.gene20292:CDS | 20.0% |
| !! | AAATTATAATTTGACTGAGA+TGG | + | chr5.1:8052300-8052319 | None:intergenic | 20.0% |
| !! | AATTAAATCAAGCAAGTTAT+TGG | + | chr5.1:8053022-8053041 | None:intergenic | 20.0% |
| !! | CGTAAATTGTAATAAGTAAT+GGG | - | chr5.1:8049508-8049527 | MS.gene20292:intron | 20.0% |
| !! | GAAAAAAACAACATTTCTAA+AGG | + | chr5.1:8051031-8051050 | None:intergenic | 20.0% |
| !! | TAAAATGAAACAAGCAATTT+AGG | + | chr5.1:8051404-8051423 | None:intergenic | 20.0% |
| !! | TCGTAAATTGTAATAAGTAA+TGG | - | chr5.1:8049507-8049526 | MS.gene20292:intron | 20.0% |
| !! | TTATATTTGAAAACAGAAGA+TGG | - | chr5.1:8048758-8048777 | MS.gene20292:CDS | 20.0% |
| !!! | AAAGAAAATGCTTTTTGTTT+TGG | - | chr5.1:8049474-8049493 | MS.gene20292:intron | 20.0% |
| !!! | TCAAAATTTTCAGTTTAACA+AGG | - | chr5.1:8050053-8050072 | MS.gene20292:intron | 20.0% |
| !!! | TCTTCTGTTTTCAAATATAA+AGG | + | chr5.1:8048758-8048777 | None:intergenic | 20.0% |
| !!! | TTCAACTTCTTTTTTTCTTA+TGG | - | chr5.1:8051609-8051628 | MS.gene20292:intron | 20.0% |
| !!! | TTGTCTAAATCTTTTTGTAT+AGG | - | chr5.1:8052673-8052692 | MS.gene20292:CDS | 20.0% |
| !!! | TTTAATTGAAAATTTTCCAG+AGG | + | chr5.1:8050885-8050904 | None:intergenic | 20.0% |
| !!! | TTTATGTTTTTCATCTGATT+GGG | + | chr5.1:8048363-8048382 | None:intergenic | 20.0% |
| !!! | TTTTATGTTTTTCATCTGAT+TGG | + | chr5.1:8048364-8048383 | None:intergenic | 20.0% |
| !!! | TTTTGCTTTGTATATTAGAA+GGG | - | chr5.1:8049006-8049025 | MS.gene20292:CDS | 20.0% |
| !!! | TTTTTTTAAACAGACTGTAT+TGG | - | chr5.1:8051922-8051941 | MS.gene20292:CDS | 20.0% |
| ! | AAAATCGAAGTTCCAAAAAA+AGG | - | chr5.1:8052053-8052072 | MS.gene20292:CDS | 25.0% |
| ! | AAATCTATCATAAGATAGAG+AGG | - | chr5.1:8053517-8053536 | MS.gene20292:CDS | 25.0% |
| ! | AAATTTAATGTGACAACGAT+AGG | + | chr5.1:8050807-8050826 | None:intergenic | 25.0% |
| ! | ACATCAATTCATCAATACAA+TGG | + | chr5.1:8051898-8051917 | None:intergenic | 25.0% |
| ! | ACCTCTATAATTCGTAAAAA+TGG | + | chr5.1:8051490-8051509 | None:intergenic | 25.0% |
| ! | ATAATGACTTGAAGATACAA+TGG | + | chr5.1:8052457-8052476 | None:intergenic | 25.0% |
| ! | ATCGTTGTCACATTAAATTT+GGG | - | chr5.1:8050807-8050826 | MS.gene20292:CDS | 25.0% |
| ! | ATTAGCAAGTACATTAGATA+CGG | + | chr5.1:8050107-8050126 | None:intergenic | 25.0% |
| ! | CTAATATAATCAATTCTCAC+TGG | - | chr5.1:8050122-8050141 | MS.gene20292:intron | 25.0% |
| ! | GAAAAATCAAAAACCTTTCT+CGG | + | chr5.1:8048440-8048459 | None:intergenic | 25.0% |
| ! | GTCTGTATAAATAGTTAGAT+GGG | - | chr5.1:8052335-8052354 | MS.gene20292:intron | 25.0% |
| ! | TAATTTCCCAAAATAGATGA+AGG | + | chr5.1:8049801-8049820 | None:intergenic | 25.0% |
| ! | TATCGTTGTCACATTAAATT+TGG | - | chr5.1:8050806-8050825 | MS.gene20292:CDS | 25.0% |
| ! | TGAAGTTACAATTTCCAAAA+TGG | - | chr5.1:8053196-8053215 | MS.gene20292:CDS | 25.0% |
| ! | TGTATCTTCAAGTCATTATT+AGG | - | chr5.1:8052458-8052477 | MS.gene20292:intron | 25.0% |
| ! | TGTCTGTATAAATAGTTAGA+TGG | - | chr5.1:8052334-8052353 | MS.gene20292:intron | 25.0% |
| ! | TTAAGATTATCATGCATACA+AGG | + | chr5.1:8049338-8049357 | None:intergenic | 25.0% |
| !! | ATATAAGTTTTCCTGGATTT+TGG | - | chr5.1:8051705-8051724 | MS.gene20292:CDS | 25.0% |
| !! | ATCTTTGTTATAATTGGTGA+CGG | + | chr5.1:8049826-8049845 | None:intergenic | 25.0% |
| !! | ATGACTAATATAAGTTTTCC+TGG | - | chr5.1:8051698-8051717 | MS.gene20292:CDS | 25.0% |
| !! | ATTTGAAACTGTTGTTAAAC+AGG | - | chr5.1:8048720-8048739 | MS.gene20292:CDS | 25.0% |
| !! | ATTTGATTTAACCATGTGTT+TGG | - | chr5.1:8052552-8052571 | MS.gene20292:intron | 25.0% |
| !! | CTTTACCTTCTTTTCAATAT+AGG | - | chr5.1:8049588-8049607 | MS.gene20292:CDS | 25.0% |
| !! | CTTTTGCTTTGTATATTAGA+AGG | - | chr5.1:8049005-8049024 | MS.gene20292:CDS | 25.0% |
| !! | GCATGATAATTTGATTGTTT+TGG | - | chr5.1:8048487-8048506 | MS.gene20292:CDS | 25.0% |
| !! | GTAAGCATCTTTGTTATAAT+TGG | + | chr5.1:8049832-8049851 | None:intergenic | 25.0% |
| !! | TTGTATATTAGAAGGGTTTT+GGG | - | chr5.1:8049013-8049032 | MS.gene20292:CDS | 25.0% |
| !! | TTTGTATATTAGAAGGGTTT+TGG | - | chr5.1:8049012-8049031 | MS.gene20292:CDS | 25.0% |
| !! | TTTTTACGAATTATAGAGGT+CGG | - | chr5.1:8051490-8051509 | MS.gene20292:CDS | 25.0% |
| !!! | ACCATTTTTACGAATTATAG+AGG | - | chr5.1:8051486-8051505 | MS.gene20292:CDS | 25.0% |
| !!! | CGTTTTGTACATAGTTTTAT+TGG | - | chr5.1:8051252-8051271 | MS.gene20292:CDS | 25.0% |
| !!! | TAATTTGATTGTTTTGGAAG+CGG | - | chr5.1:8048493-8048512 | MS.gene20292:CDS | 25.0% |
| !!! | TCTAGTTCTATTTTGAATTC+TGG | - | chr5.1:8052396-8052415 | MS.gene20292:intron | 25.0% |
| !!! | TTTTTTCCCTTGAAATATTC+AGG | - | chr5.1:8051793-8051812 | MS.gene20292:CDS | 25.0% |
| AAAAGAATGGTGATTCCAAA+GGG | - | chr5.1:8051179-8051198 | MS.gene20292:CDS | 30.0% | |
| AAACACAGTAAAATGTATGC+TGG | + | chr5.1:8049153-8049172 | None:intergenic | 30.0% | |
| AAATGAAAACAGATAGATGC+CGG | + | chr5.1:8052536-8052555 | None:intergenic | 30.0% | |
| AACACAGTAAAATGTATGCT+GGG | + | chr5.1:8049152-8049171 | None:intergenic | 30.0% | |
| AACTGCTTGGAAAAACTATT+TGG | - | chr5.1:8051968-8051987 | MS.gene20292:CDS | 30.0% | |
| AAGAATAATCCATTGTTGTG+AGG | + | chr5.1:8052796-8052815 | None:intergenic | 30.0% | |
| AAGTTGAGCTCTCTTAAATT+TGG | - | chr5.1:8049415-8049434 | MS.gene20292:intron | 30.0% | |
| AATTGACGTGAAATTATAGC+AGG | + | chr5.1:8051676-8051695 | None:intergenic | 30.0% | |
| ACGTATCATCTATATGAAAC+TGG | - | chr5.1:8053615-8053634 | MS.gene20292:CDS | 30.0% | |
| AGAAATTGATGCATGTAAAG+GGG | - | chr5.1:8053574-8053593 | MS.gene20292:CDS | 30.0% | |
| AGAGTATAATAGATGCAGTT+GGG | - | chr5.1:8053352-8053371 | MS.gene20292:CDS | 30.0% | |
| AGGAAAAAATCTAAATCCTC+TGG | - | chr5.1:8050866-8050885 | MS.gene20292:CDS | 30.0% | |
| AGGGTTTGATTGAATGAATT+AGG | + | chr5.1:8048166-8048185 | None:intergenic | 30.0% | |
| AGTTGAGCTCTCTTAAATTT+GGG | - | chr5.1:8049416-8049435 | MS.gene20292:intron | 30.0% | |
| ATACTTGCAAAATATTGCAC+CGG | + | chr5.1:8050339-8050358 | None:intergenic | 30.0% | |
| ATATCTTGTCTTCATTGAAC+CGG | - | chr5.1:8052842-8052861 | MS.gene20292:CDS | 30.0% | |
| ATGTTTGTGCAACATTAGAT+TGG | - | chr5.1:8049233-8049252 | MS.gene20292:intron | 30.0% | |
| CAATATCATAACAATCATGC+CGG | + | chr5.1:8051822-8051841 | None:intergenic | 30.0% | |
| CAATTCATCAATACAATGGA+AGG | + | chr5.1:8051894-8051913 | None:intergenic | 30.0% | |
| CCAAAAAAAGGAAGAAAACA+GGG | - | chr5.1:8052065-8052084 | MS.gene20292:CDS | 30.0% | |
| CTAATCCACACTATAAAATC+CGG | - | chr5.1:8052514-8052533 | MS.gene20292:intron | 30.0% | |
| CTCGACATTCAATAAACTTA+CGG | - | chr5.1:8053299-8053318 | MS.gene20292:CDS | 30.0% | |
| GAATGCAAAACAAAATCACA+AGG | + | chr5.1:8051546-8051565 | None:intergenic | 30.0% | |
| GAGAAATTGATGCATGTAAA+GGG | - | chr5.1:8053573-8053592 | MS.gene20292:CDS | 30.0% | |
| GATGATTATTTAGTAGCTGT+AGG | - | chr5.1:8050938-8050957 | MS.gene20292:CDS | 30.0% | |
| GGGTTTGATTGAATGAATTA+GGG | + | chr5.1:8048165-8048184 | None:intergenic | 30.0% | |
| GTTGACATTGAAGAAAAAAG+TGG | - | chr5.1:8048628-8048647 | MS.gene20292:CDS | 30.0% | |
| GTTTCAACTGAATCATGTTT+GGG | - | chr5.1:8053042-8053061 | MS.gene20292:CDS | 30.0% | |
| GTTTCATTTGTGAAGGAATA+TGG | - | chr5.1:8052482-8052501 | MS.gene20292:intron | 30.0% | |
| TAAAACTCATCTTATGGAAC+TGG | - | chr5.1:8050379-8050398 | MS.gene20292:intron | 30.0% | |
| TAAATGTTCACTTCCACTTT+CGG | + | chr5.1:8053160-8053179 | None:intergenic | 30.0% | |
| TAAGTGATGCATTGAGTAAA+AGG | + | chr5.1:8051581-8051600 | None:intergenic | 30.0% | |
| TCATCACAGAATTGAATTTG+AGG | - | chr5.1:8052870-8052889 | MS.gene20292:CDS | 30.0% | |
| TCATCTATATGAAACTGGAA+AGG | - | chr5.1:8053620-8053639 | MS.gene20292:CDS | 30.0% | |
| TCCAAAAAAAGGAAGAAAAC+AGG | - | chr5.1:8052064-8052083 | MS.gene20292:CDS | 30.0% | |
| TCGTTGTCACATTAAATTTG+GGG | - | chr5.1:8050808-8050827 | MS.gene20292:CDS | 30.0% | |
| TGACTGATGACTATAATTAG+TGG | - | chr5.1:8053649-8053668 | MS.gene20292:CDS | 30.0% | |
| TGTTTCAACTGAATCATGTT+TGG | - | chr5.1:8053041-8053060 | MS.gene20292:CDS | 30.0% | |
| TTAGCAAGTACATTAGATAC+GGG | + | chr5.1:8050106-8050125 | None:intergenic | 30.0% | |
| TTCTTCTACATTACTTTCAG+AGG | - | chr5.1:8051219-8051238 | MS.gene20292:CDS | 30.0% | |
| TTGAATGTCGAGAATTTATC+TGG | + | chr5.1:8053291-8053310 | None:intergenic | 30.0% | |
| TTGAGACTATATGTGAAGAA+TGG | - | chr5.1:8048537-8048556 | MS.gene20292:CDS | 30.0% | |
| ! | AAGAGTATAATAGATGCAGT+TGG | - | chr5.1:8053351-8053370 | MS.gene20292:CDS | 30.0% |
| ! | AGAGGATTTAGAGGATTTTA+GGG | + | chr5.1:8048135-8048154 | None:intergenic | 30.0% |
| ! | CATCTTTTGTTCAGTTTCAT+TGG | - | chr5.1:8051735-8051754 | MS.gene20292:CDS | 30.0% |
| ! | GATATGTTGTATGCATTTTG+AGG | + | chr5.1:8052827-8052846 | None:intergenic | 30.0% |
| ! | TTGATCGCCAATCTAAAATT+AGG | - | chr5.1:8050702-8050721 | MS.gene20292:CDS | 30.0% |
| ! | TTTAAAATTCATCTACCCTC+TGG | - | chr5.1:8051286-8051305 | MS.gene20292:CDS | 30.0% |
| !! | AATCTTAGTTTTCTTCCCTT+TGG | + | chr5.1:8051197-8051216 | None:intergenic | 30.0% |
| !! | ACATAAGTTGTTGCTTTCTT+TGG | - | chr5.1:8050730-8050749 | MS.gene20292:CDS | 30.0% |
| !! | CATAAGTTGTTGCTTTCTTT+GGG | - | chr5.1:8050731-8050750 | MS.gene20292:CDS | 30.0% |
| !! | TTGCTTGTTTCATTTTAACG+TGG | - | chr5.1:8051407-8051426 | MS.gene20292:CDS | 30.0% |
| !! | TTGGTTGATTTTCAATTGTC+TGG | - | chr5.1:8051754-8051773 | MS.gene20292:CDS | 30.0% |
| !!! | AAGTTTCTGGCTTTTTTGTT+TGG | - | chr5.1:8048785-8048804 | MS.gene20292:CDS | 30.0% |
| !!! | AGTTTCTGGCTTTTTTGTTT+GGG | - | chr5.1:8048786-8048805 | MS.gene20292:CDS | 30.0% |
| !!! | GTTGTTTTTTTCGCTTAAGA+TGG | - | chr5.1:8051039-8051058 | MS.gene20292:CDS | 30.0% |
| !!! | TGCTTTTTGTTTTGGATTAG+CGG | - | chr5.1:8049482-8049501 | MS.gene20292:intron | 30.0% |
| !!! | TTTAGAGGATTTTAGGGTTA+AGG | + | chr5.1:8048129-8048148 | None:intergenic | 30.0% |
| AAAATTCCACAAAAAGGCGA+AGG | - | chr5.1:8052095-8052114 | MS.gene20292:CDS | 35.0% | |
| AAACTAGCACAGTGCAAATT+GGG | + | chr5.1:8051452-8051471 | None:intergenic | 35.0% | |
| AAAGTGGAAGGTTTACTAAC+TGG | - | chr5.1:8050551-8050570 | MS.gene20292:CDS | 35.0% | |
| AACAAAAAGAGCCAAACACA+TGG | + | chr5.1:8052566-8052585 | None:intergenic | 35.0% | |
| AACGATCTCGATAGAACAAA+AGG | + | chr5.1:8048611-8048630 | None:intergenic | 35.0% | |
| AAGCTTACAACATAGCATCA+CGG | + | chr5.1:8049289-8049308 | None:intergenic | 35.0% | |
| AAGTGGAAGGTTTACTAACT+GGG | - | chr5.1:8050552-8050571 | MS.gene20292:CDS | 35.0% | |
| ACAGCAATTGTTCTAACTTC+TGG | + | chr5.1:8049760-8049779 | None:intergenic | 35.0% | |
| ACAGTGTTACAGCTACTAAA+AGG | - | chr5.1:8050846-8050865 | MS.gene20292:CDS | 35.0% | |
| ACTAGTAAAAAGGTCTCCAA+TGG | - | chr5.1:8050313-8050332 | MS.gene20292:intron | 35.0% | |
| AGAAAAAAGTGGATGTGCAT+AGG | - | chr5.1:8048639-8048658 | MS.gene20292:CDS | 35.0% | |
| AGAAGATGGAAGAAAGTTTC+TGG | - | chr5.1:8048772-8048791 | MS.gene20292:CDS | 35.0% | |
| AGACTATATGTGAAGAATGG+TGG | - | chr5.1:8048540-8048559 | MS.gene20292:CDS | 35.0% | |
| AGATCTAAAGATTGCTTTCC+TGG | + | chr5.1:8051005-8051024 | None:intergenic | 35.0% | |
| AGCTAGTAATAACGATGAAC+TGG | - | chr5.1:8053551-8053570 | MS.gene20292:CDS | 35.0% | |
| AGCTCAACTTGATTATAAGC+TGG | + | chr5.1:8049405-8049424 | None:intergenic | 35.0% | |
| AGTTGTTTAATCGTGATGAC+AGG | - | chr5.1:8053460-8053479 | MS.gene20292:CDS | 35.0% | |
| ATAACTTGGAGTCAACAACT+GGG | - | chr5.1:8052029-8052048 | MS.gene20292:CDS | 35.0% | |
| ATTAGGCGTTTCATTTGTGA+AGG | - | chr5.1:8052475-8052494 | MS.gene20292:intron | 35.0% | |
| ATTGAGGAAGGATTGAATTG+TGG | + | chr5.1:8048240-8048259 | None:intergenic | 35.0% | |
| CAATGTGGATTCACATAACT+TGG | - | chr5.1:8052015-8052034 | MS.gene20292:CDS | 35.0% | |
| CACTGTACAATATCACAATG+TGG | - | chr5.1:8052000-8052019 | MS.gene20292:CDS | 35.0% | |
| CAGAATTGAATTTGAGGAAG+AGG | - | chr5.1:8052876-8052895 | MS.gene20292:CDS | 35.0% | |
| CGGAAACCTGAATATTTCAA+GGG | + | chr5.1:8051802-8051821 | None:intergenic | 35.0% | |
| CTGTAATCTTATGACTTTCG+AGG | - | chr5.1:8049366-8049385 | MS.gene20292:intron | 35.0% | |
| GAAAAAAGTGGATGTGCATA+GGG | - | chr5.1:8048640-8048659 | MS.gene20292:CDS | 35.0% | |
| GAAAAGAATGGTGATTCCAA+AGG | - | chr5.1:8051178-8051197 | MS.gene20292:CDS | 35.0% | |
| GAAGAAATGAGATTGGAAGA+GGG | + | chr5.1:8048185-8048204 | None:intergenic | 35.0% | |
| GAGTATAATAGATGCAGTTG+GGG | - | chr5.1:8053353-8053372 | MS.gene20292:CDS | 35.0% | |
| GCTAAAGAGATGAATTCTTG+TGG | + | chr5.1:8048101-8048120 | None:intergenic | 35.0% | |
| GCTGCATTACACTAGTAAAA+AGG | - | chr5.1:8050303-8050322 | MS.gene20292:intron | 35.0% | |
| GGAGAAATTGATGCATGTAA+AGG | - | chr5.1:8053572-8053591 | MS.gene20292:CDS | 35.0% | |
| GTACATTAGATACGGGAATT+AGG | + | chr5.1:8050099-8050118 | None:intergenic | 35.0% | |
| GTCATCACGATTAAACAACT+TGG | + | chr5.1:8053460-8053479 | None:intergenic | 35.0% | |
| GTTAAATGAATGAGTGAGCT+AGG | + | chr5.1:8051865-8051884 | None:intergenic | 35.0% | |
| GTTGTTTAATCGTGATGACA+GGG | - | chr5.1:8053461-8053480 | MS.gene20292:CDS | 35.0% | |
| TAAACTAGCACAGTGCAAAT+TGG | + | chr5.1:8051453-8051472 | None:intergenic | 35.0% | |
| TATAGATGATACGTCCAAAG+AGG | + | chr5.1:8053609-8053628 | None:intergenic | 35.0% | |
| TCTGAAGACTTTGCATTACA+CGG | - | chr5.1:8049198-8049217 | MS.gene20292:intron | 35.0% | |
| TGAAGAAATGAGATTGGAAG+AGG | + | chr5.1:8048186-8048205 | None:intergenic | 35.0% | |
| TGACATGATGTTATCTTCTC+TGG | - | chr5.1:8053491-8053510 | MS.gene20292:CDS | 35.0% | |
| TGCAATGAATACCAGCAATT+TGG | + | chr5.1:8051347-8051366 | None:intergenic | 35.0% | |
| TGCAGCCTATATTGAAAAGA+AGG | + | chr5.1:8049596-8049615 | None:intergenic | 35.0% | |
| TGCAGTAAGTAACTCTTTGA+GGG | + | chr5.1:8050528-8050547 | None:intergenic | 35.0% | |
| TGTAATGCAAAGTCTTCAGA+TGG | + | chr5.1:8049198-8049217 | None:intergenic | 35.0% | |
| TTCTTGCAGGATTTGATTGA+GGG | - | chr5.1:8048959-8048978 | MS.gene20292:CDS | 35.0% | |
| TTTAGTAGCTGTAACACTGT+GGG | + | chr5.1:8050846-8050865 | None:intergenic | 35.0% | |
| ! | AATGTGATACTGACTGATTC+CGG | - | chr5.1:8052958-8052977 | MS.gene20292:CDS | 35.0% |
| ! | AGCGTCTAAAACTCATCTTA+TGG | - | chr5.1:8050373-8050392 | MS.gene20292:intron | 35.0% |
| ! | AGTTAGAACAATTGCTGTTG+AGG | - | chr5.1:8049762-8049781 | MS.gene20292:CDS | 35.0% |
| ! | ATTTTCTCACCTCCATTACT+TGG | + | chr5.1:8052145-8052164 | None:intergenic | 35.0% |
| ! | ATTTTGCAAGTATGCCATCT+CGG | - | chr5.1:8050346-8050365 | MS.gene20292:intron | 35.0% |
| ! | CATAGACATATCTCCTGTTT+TGG | - | chr5.1:8051102-8051121 | MS.gene20292:CDS | 35.0% |
| ! | CCCTGTTTTCTTCCTTTTTT+TGG | + | chr5.1:8052068-8052087 | None:intergenic | 35.0% |
| ! | CCTTGAAATATTCAGGTTTC+CGG | - | chr5.1:8051800-8051819 | MS.gene20292:CDS | 35.0% |
| ! | GAAGGCTTTTGATGTCATTA+TGG | + | chr5.1:8052992-8053011 | None:intergenic | 35.0% |
| ! | GAGAGGATTTAGAGGATTTT+AGG | + | chr5.1:8048136-8048155 | None:intergenic | 35.0% |
| ! | GTGCAGACCTAATTTTAGAT+TGG | + | chr5.1:8050712-8050731 | None:intergenic | 35.0% |
| ! | GTTAGAACAATTGCTGTTGA+GGG | - | chr5.1:8049763-8049782 | MS.gene20292:CDS | 35.0% |
| ! | TATATGTGAAGAATGGTGGA+AGG | - | chr5.1:8048544-8048563 | MS.gene20292:CDS | 35.0% |
| ! | TCGTGTCCTTCATCTATTTT+GGG | - | chr5.1:8049792-8049811 | MS.gene20292:intron | 35.0% |
| ! | TGTATCCTTATCCTCTTTTG+AGG | + | chr5.1:8049686-8049705 | None:intergenic | 35.0% |
| ! | TTTTAGTAGCTGTAACACTG+TGG | + | chr5.1:8050847-8050866 | None:intergenic | 35.0% |
| ! | TTTTCATCTGATTGGGAACT+GGG | + | chr5.1:8048356-8048375 | None:intergenic | 35.0% |
| ! | TTTTCTCACCTCCATTACTT+GGG | + | chr5.1:8052144-8052163 | None:intergenic | 35.0% |
| ! | TTTTTCATCTGATTGGGAAC+TGG | + | chr5.1:8048357-8048376 | None:intergenic | 35.0% |
| !! | ATAGTGTGGATTAGCCAAAA+GGG | + | chr5.1:8052508-8052527 | None:intergenic | 35.0% |
| !! | CAAATGACGGTTGATAATGT+TGG | - | chr5.1:8051145-8051164 | MS.gene20292:CDS | 35.0% |
| !! | TATAGTGTGGATTAGCCAAA+AGG | + | chr5.1:8052509-8052528 | None:intergenic | 35.0% |
| !! | TCTTGGTTTGTTCACTTGTT+GGG | - | chr5.1:8053382-8053401 | MS.gene20292:CDS | 35.0% |
| !! | TTCTTGGTTTGTTCACTTGT+TGG | - | chr5.1:8053381-8053400 | MS.gene20292:CDS | 35.0% |
| !!! | ACAGTTTTGGCTACAATCAA+GGG | + | chr5.1:8053222-8053241 | None:intergenic | 35.0% |
| !!! | ATATTAGAAGGGTTTTGGGA+GGG | - | chr5.1:8049017-8049036 | MS.gene20292:intron | 35.0% |
| !!! | ATGAATTAGGGTTTTGAGAG+AGG | + | chr5.1:8048153-8048172 | None:intergenic | 35.0% |
| !!! | GATTTTTCTGATTTGCTACC+TGG | - | chr5.1:8048452-8048471 | MS.gene20292:CDS | 35.0% |
| !!! | TATATTAGAAGGGTTTTGGG+AGG | - | chr5.1:8049016-8049035 | MS.gene20292:CDS | 35.0% |
| ACCTCAACAAGTGCTTTGTA+AGG | - | chr5.1:8052711-8052730 | MS.gene20292:CDS | 40.0% | |
| AGAACAAAAGGACTTTGAGC+TGG | - | chr5.1:8053407-8053426 | MS.gene20292:CDS | 40.0% | |
| AGAAGAAAATGCACAACCAG+AGG | + | chr5.1:8051305-8051324 | None:intergenic | 40.0% | |
| AGAAGAAACCTGTAGAGAAG+TGG | + | chr5.1:8052422-8052441 | None:intergenic | 40.0% | |
| AGGGAGTGAAGAAATGAGAT+TGG | + | chr5.1:8048192-8048211 | None:intergenic | 40.0% | |
| AGGGTCATATATGCCAAAAC+AGG | + | chr5.1:8051118-8051137 | None:intergenic | 40.0% | |
| AGTCAGTGAACCATGCTATA+TGG | - | chr5.1:8050499-8050518 | MS.gene20292:CDS | 40.0% | |
| AGTGGAAGGTTTACTAACTG+GGG | - | chr5.1:8050553-8050572 | MS.gene20292:CDS | 40.0% | |
| ATGATGTATGCAACGAGGTA+AGG | - | chr5.1:8049875-8049894 | MS.gene20292:intron | 40.0% | |
| ATTAATCAGAGGACCGTTGA+TGG | - | chr5.1:8049043-8049062 | MS.gene20292:intron | 40.0% | |
| ATTCCACTCCTTGAATCTTC+TGG | + | chr5.1:8048929-8048948 | None:intergenic | 40.0% | |
| CAAAAGTTCCAGAACTTGCA+TGG | + | chr5.1:8048991-8049010 | None:intergenic | 40.0% | |
| CAACATCTTCAGGTAAACCA+TGG | + | chr5.1:8050685-8050704 | None:intergenic | 40.0% | |
| CAAGGAGTGGAATTGAGAAT+GGG | - | chr5.1:8048936-8048955 | MS.gene20292:CDS | 40.0% | |
| CAAGTTATTGGCAAGAGTGA+AGG | + | chr5.1:8053010-8053029 | None:intergenic | 40.0% | |
| CAATAAACTTACGGCTATGC+TGG | - | chr5.1:8053308-8053327 | MS.gene20292:CDS | 40.0% | |
| CAATTCTGTGATGATACAGC+CGG | + | chr5.1:8052864-8052883 | None:intergenic | 40.0% | |
| CACATTATCTGGACAAACAG+TGG | + | chr5.1:8050621-8050640 | None:intergenic | 40.0% | |
| CACTGTTTGTCCAGATAATG+TGG | - | chr5.1:8050619-8050638 | MS.gene20292:CDS | 40.0% | |
| CAGTGCAAATTGGGAATGAA+AGG | + | chr5.1:8051443-8051462 | None:intergenic | 40.0% | |
| CATAACTTGGAGTCAACAAC+TGG | - | chr5.1:8052028-8052047 | MS.gene20292:CDS | 40.0% | |
| CCGGAAACCTGAATATTTCA+AGG | + | chr5.1:8051803-8051822 | None:intergenic | 40.0% | |
| CTGAAGACTTTGCATTACAC+GGG | - | chr5.1:8049199-8049218 | MS.gene20292:intron | 40.0% | |
| CTGAATGCAGATCAGATAGA+GGG | - | chr5.1:8050440-8050459 | MS.gene20292:intron | 40.0% | |
| CTGCAGTAAGTAACTCTTTG+AGG | + | chr5.1:8050529-8050548 | None:intergenic | 40.0% | |
| CTTAAGGACTTCATGAGAGT+GGG | + | chr5.1:8049941-8049960 | None:intergenic | 40.0% | |
| GAAATTATAGCAGGCCAGAA+TGG | + | chr5.1:8051667-8051686 | None:intergenic | 40.0% | |
| GAAGAAAATGCACAACCAGA+GGG | + | chr5.1:8051304-8051323 | None:intergenic | 40.0% | |
| GGCACAAGTAGTGAAAAGAA+TGG | - | chr5.1:8051166-8051185 | MS.gene20292:CDS | 40.0% | |
| GGGATATATTGTTTCGAGCA+TGG | - | chr5.1:8048894-8048913 | MS.gene20292:CDS | 40.0% | |
| GTAAGGCTTTCTACGTTGAA+TGG | - | chr5.1:8049892-8049911 | MS.gene20292:intron | 40.0% | |
| GTTACTTACTGCAGAGAAAG+TGG | - | chr5.1:8050535-8050554 | MS.gene20292:CDS | 40.0% | |
| GTTCTTGCAGGATTTGATTG+AGG | - | chr5.1:8048958-8048977 | MS.gene20292:CDS | 40.0% | |
| TAATCGTGATGACAGGGATT+GGG | - | chr5.1:8053467-8053486 | MS.gene20292:CDS | 40.0% | |
| TAGGGTTTATATGTTTCGCG+AGG | - | chr5.1:8048658-8048677 | MS.gene20292:CDS | 40.0% | |
| TAGTTTCTCAACCCCATCAA+CGG | + | chr5.1:8049059-8049078 | None:intergenic | 40.0% | |
| TATAAGCTGGTATACCAACC+AGG | + | chr5.1:8049392-8049411 | None:intergenic | 40.0% | |
| TCAAGGAGTGGAATTGAGAA+TGG | - | chr5.1:8048935-8048954 | MS.gene20292:CDS | 40.0% | |
| TGAACTATGTGTATCGTCTC+TGG | - | chr5.1:8052624-8052643 | MS.gene20292:CDS | 40.0% | |
| TGGGAGGGTTTATTAATCAG+AGG | - | chr5.1:8049032-8049051 | MS.gene20292:intron | 40.0% | |
| TTAAGGACTTCATGAGAGTG+GGG | + | chr5.1:8049940-8049959 | None:intergenic | 40.0% | |
| TTAATCAGAGGACCGTTGAT+GGG | - | chr5.1:8049044-8049063 | MS.gene20292:intron | 40.0% | |
| TTAATCGTGATGACAGGGAT+TGG | - | chr5.1:8053466-8053485 | MS.gene20292:CDS | 40.0% | |
| ! | AAGTCAGCATTGAGCATTGT+GGG | - | chr5.1:8051068-8051087 | MS.gene20292:CDS | 40.0% |
| ! | AATTGAGAATGGGTTCTTGC+AGG | - | chr5.1:8048946-8048965 | MS.gene20292:CDS | 40.0% |
| ! | ACCTTACAAAGCACTTGTTG+AGG | + | chr5.1:8052715-8052734 | None:intergenic | 40.0% |
| ! | ACTATTGAGGGAAAGTACGA+AGG | + | chr5.1:8050260-8050279 | None:intergenic | 40.0% |
| ! | ACTTGTTGGGCTAGAACAAA+AGG | - | chr5.1:8053395-8053414 | MS.gene20292:CDS | 40.0% |
| ! | AGATGCCGGATTTTATAGTG+TGG | + | chr5.1:8052522-8052541 | None:intergenic | 40.0% |
| ! | ATCAATTCTCACTGGTTAGC+TGG | - | chr5.1:8050130-8050149 | MS.gene20292:intron | 40.0% |
| ! | ATGGTGGAAGGAGAATTTAC+CGG | - | chr5.1:8048556-8048575 | MS.gene20292:CDS | 40.0% |
| ! | CATAGCTGAAAGAGCTTTTC+AGG | + | chr5.1:8052924-8052943 | None:intergenic | 40.0% |
| ! | GAATGCTTTGCATCTGCTTT+TGG | - | chr5.1:8049633-8049652 | MS.gene20292:CDS | 40.0% |
| ! | GGCTTTTGATGTCATTATGG+AGG | + | chr5.1:8052989-8053008 | None:intergenic | 40.0% |
| ! | GGTCAAAGCATTCTTGAGTT+TGG | - | chr5.1:8050400-8050419 | MS.gene20292:intron | 40.0% |
| ! | GTCGTGTCCTTCATCTATTT+TGG | - | chr5.1:8049791-8049810 | MS.gene20292:intron | 40.0% |
| ! | TGCAGTTGGGGATATTTTCT+TGG | - | chr5.1:8053365-8053384 | MS.gene20292:CDS | 40.0% |
| ! | TGTTCGATTCGAGAAGATTG+AGG | + | chr5.1:8048256-8048275 | None:intergenic | 40.0% |
| ! | TGTTTTGCTCCTCACAACAA+TGG | - | chr5.1:8052784-8052803 | MS.gene20292:CDS | 40.0% |
| ! | TTTGTTAGCTTCTGAGCTAC+AGG | + | chr5.1:8050227-8050246 | None:intergenic | 40.0% |
| !! | AAGTTGTTGCTTTCTTTGGG+AGG | - | chr5.1:8050734-8050753 | MS.gene20292:CDS | 40.0% |
| !! | AGCGGATTCGATTTTGTCTT+CGG | - | chr5.1:8048511-8048530 | MS.gene20292:CDS | 40.0% |
| !! | TACTGCTGTTCTGAAGTTCA+TGG | - | chr5.1:8052744-8052763 | MS.gene20292:CDS | 40.0% |
| !!! | CACAGTTTTGGCTACAATCA+AGG | + | chr5.1:8053223-8053242 | None:intergenic | 40.0% |
| !!! | CTTATCCTCTTTTGAGGCAT+CGG | + | chr5.1:8049680-8049699 | None:intergenic | 40.0% |
| !!! | GGATTTTAGGGTTAAGGTTG+TGG | + | chr5.1:8048123-8048142 | None:intergenic | 40.0% |
| !!! | GGTTTTGAGAGAGGATTTAG+AGG | + | chr5.1:8048144-8048163 | None:intergenic | 40.0% |
| !!! | TTATCCTCTTTTGAGGCATC+GGG | + | chr5.1:8049679-8049698 | None:intergenic | 40.0% |
| AAAACTACATCAGGCAGCCA+AGG | + | chr5.1:8053105-8053124 | None:intergenic | 45.0% | |
| AACCGTCATTTGCAGAGCAA+GGG | + | chr5.1:8051137-8051156 | None:intergenic | 45.0% | |
| AAGACTGGGTCACTTAATGC+TGG | - | chr5.1:8049972-8049991 | MS.gene20292:intron | 45.0% | |
| AAGCTGTGCCAGAAGATTCA+AGG | - | chr5.1:8048918-8048937 | MS.gene20292:CDS | 45.0% | |
| AAGGACTTTGAGCTGGCATT+AGG | - | chr5.1:8053414-8053433 | MS.gene20292:CDS | 45.0% | |
| AAGTCGATGTTGGAGGCTTA+TGG | - | chr5.1:8048872-8048891 | MS.gene20292:CDS | 45.0% | |
| AATCGTGATGACAGGGATTG+GGG | - | chr5.1:8053468-8053487 | MS.gene20292:CDS | 45.0% | |
| AATGCTGGGTACCCAAGTAA+TGG | - | chr5.1:8052130-8052149 | MS.gene20292:intron | 45.0% | |
| AATTCTGGCCACTTCTCTAC+AGG | - | chr5.1:8052411-8052430 | MS.gene20292:intron | 45.0% | |
| AGAAGTCCTGCCACATTATC+TGG | + | chr5.1:8050632-8050651 | None:intergenic | 45.0% | |
| AGCATTAAGTGACCCAGTCT+TGG | + | chr5.1:8049973-8049992 | None:intergenic | 45.0% | |
| AGGCTATCTCTGACAAATGC+TGG | - | chr5.1:8052115-8052134 | MS.gene20292:intron | 45.0% | |
| AGTCATATTTCGGTCTCTGC+AGG | - | chr5.1:8049099-8049118 | MS.gene20292:intron | 45.0% | |
| AGTCGATGTTGGAGGCTTAT+GGG | - | chr5.1:8048873-8048892 | MS.gene20292:CDS | 45.0% | |
| AGTGTTGTCACAAACTGCCA+TGG | - | chr5.1:8050665-8050684 | MS.gene20292:CDS | 45.0% | |
| ATCTGATTGGGAACTGGGTT+CGG | + | chr5.1:8048351-8048370 | None:intergenic | 45.0% | |
| ATCTTATGACTTTCGAGGCC+TGG | - | chr5.1:8049371-8049390 | MS.gene20292:intron | 45.0% | |
| ATTCGTTCGCAGATTCCCTA+TGG | - | chr5.1:8048845-8048864 | MS.gene20292:CDS | 45.0% | |
| CCACTCTCATGAAGTCCTTA+AGG | - | chr5.1:8049939-8049958 | MS.gene20292:intron | 45.0% | |
| CCATAGCAACTTGTACTGTG+AGG | + | chr5.1:8050005-8050024 | None:intergenic | 45.0% | |
| CCTCACAGTACAAGTTGCTA+TGG | - | chr5.1:8050002-8050021 | MS.gene20292:intron | 45.0% | |
| CCTTAAGGACTTCATGAGAG+TGG | + | chr5.1:8049942-8049961 | None:intergenic | 45.0% | |
| CGATGCCTCAAAAGAGGATA+AGG | - | chr5.1:8049678-8049697 | MS.gene20292:CDS | 45.0% | |
| CGATTACATGCCTCCTCAAT+GGG | + | chr5.1:8050284-8050303 | None:intergenic | 45.0% | |
| CGATTCGAGAAGATTGAGGA+AGG | + | chr5.1:8048252-8048271 | None:intergenic | 45.0% | |
| CGTTGTTGTGTGATTCCTGT+AGG | - | chr5.1:8050154-8050173 | MS.gene20292:intron | 45.0% | |
| CTTAACAACCCTGCTGCATA+AGG | - | chr5.1:8050778-8050797 | MS.gene20292:CDS | 45.0% | |
| CTTACTGCAGAGAAAGTGGA+AGG | - | chr5.1:8050539-8050558 | MS.gene20292:CDS | 45.0% | |
| CTTATGCAGCAGGGTTGTTA+AGG | + | chr5.1:8050780-8050799 | None:intergenic | 45.0% | |
| GAGGAAGGATTGAATTGTGG+TGG | + | chr5.1:8048237-8048256 | None:intergenic | 45.0% | |
| GATGCAGACAACCAAAATCC+AGG | + | chr5.1:8051719-8051738 | None:intergenic | 45.0% | |
| GATTGGCGATCAACATCTTC+AGG | + | chr5.1:8050695-8050714 | None:intergenic | 45.0% | |
| GCATGTCAAAGCCAAATTGC+TGG | - | chr5.1:8051333-8051352 | MS.gene20292:CDS | 45.0% | |
| GCTGAATGCAGATCAGATAG+AGG | - | chr5.1:8050439-8050458 | MS.gene20292:intron | 45.0% | |
| GGCTATCTCTGACAAATGCT+GGG | - | chr5.1:8052116-8052135 | MS.gene20292:intron | 45.0% | |
| GGTTCTATCCATGCAAGTTC+TGG | - | chr5.1:8048980-8048999 | MS.gene20292:CDS | 45.0% | |
| GTAAAAAGGTCTCCAATGGC+CGG | - | chr5.1:8050317-8050336 | MS.gene20292:intron | 45.0% | |
| GTCTCATGATGTATGCAACG+AGG | - | chr5.1:8049870-8049889 | MS.gene20292:intron | 45.0% | |
| GTGAATGAAGGTGAAGGAGA+TGG | - | chr5.1:8053252-8053271 | MS.gene20292:CDS | 45.0% | |
| GTTCTACAACACACCGAAAG+TGG | - | chr5.1:8053144-8053163 | MS.gene20292:CDS | 45.0% | |
| GTTGTGAGGAGCAAAACACA+TGG | + | chr5.1:8052782-8052801 | None:intergenic | 45.0% | |
| GTTTGTCCAGATAATGTGGC+AGG | - | chr5.1:8050623-8050642 | MS.gene20292:CDS | 45.0% | |
| TAATCAGAGGACCGTTGATG+GGG | - | chr5.1:8049045-8049064 | MS.gene20292:intron | 45.0% | |
| TAGTAGCTGTAGGAGTTGCA+TGG | - | chr5.1:8050948-8050967 | MS.gene20292:CDS | 45.0% | |
| TCATGCAATGCTTGAACTCC+AGG | + | chr5.1:8048473-8048492 | None:intergenic | 45.0% | |
| TCCTCAATGGGCACTATTGA+GGG | + | chr5.1:8050272-8050291 | None:intergenic | 45.0% | |
| TCTGCAGTGAATGAAGGTGA+AGG | - | chr5.1:8053246-8053265 | MS.gene20292:CDS | 45.0% | |
| TGCAGAGACCGAAATATGAC+TGG | + | chr5.1:8049100-8049119 | None:intergenic | 45.0% | |
| TGTCATTATGGAGGATCCAC+CGG | + | chr5.1:8052980-8052999 | None:intergenic | 45.0% | |
| TGTTGTGTGATTCCTGTAGG+TGG | - | chr5.1:8050157-8050176 | MS.gene20292:intron | 45.0% | |
| TTCGAAGTCAAACAACGCGA+AGG | + | chr5.1:8048684-8048703 | None:intergenic | 45.0% | |
| TTGAGCACACTGTGCGAAAT+AGG | - | chr5.1:8052237-8052256 | MS.gene20292:intron | 45.0% | |
| TTGCCGAGCCAGTCATATTT+CGG | - | chr5.1:8049089-8049108 | MS.gene20292:intron | 45.0% | |
| ! | AGACCGAAATATGACTGGCT+CGG | + | chr5.1:8049095-8049114 | None:intergenic | 45.0% |
| ! | AGATAGCCTTCGCCTTTTTG+TGG | + | chr5.1:8052104-8052123 | None:intergenic | 45.0% |
| ! | CAAAATATTGCACCGGCCAT+TGG | + | chr5.1:8050332-8050351 | None:intergenic | 45.0% |
| ! | CGGATTCGATTTTGTCTTCG+GGG | - | chr5.1:8048513-8048532 | MS.gene20292:CDS | 45.0% |
| ! | GAAGTCAGCATTGAGCATTG+TGG | - | chr5.1:8051067-8051086 | MS.gene20292:CDS | 45.0% |
| ! | GCGGATTCGATTTTGTCTTC+GGG | - | chr5.1:8048512-8048531 | MS.gene20292:CDS | 45.0% |
| ! | GCTACAATCAAGGGCCATTT+TGG | + | chr5.1:8053213-8053232 | None:intergenic | 45.0% |
| ! | GGATTGAATTGTGGTGGTGA+TGG | + | chr5.1:8048231-8048250 | None:intergenic | 45.0% |
| ! | GTGAAGGAATATGGCCCTTT+TGG | - | chr5.1:8052491-8052510 | MS.gene20292:intron | 45.0% |
| ! | GTGCTCAAGTTGCATGCATT+TGG | + | chr5.1:8052225-8052244 | None:intergenic | 45.0% |
| ! | TAGAGACTTGCTTCAGCATG+AGG | - | chr5.1:8050976-8050995 | MS.gene20292:CDS | 45.0% |
| ! | TTGGCTGCCTGATGTAGTTT+TGG | - | chr5.1:8053104-8053123 | MS.gene20292:CDS | 45.0% |
| !! | AACATCGACTTCCGTCCATA+GGG | + | chr5.1:8048863-8048882 | None:intergenic | 45.0% |
| !! | CTTCGAAGATGAGAGTATCG+AGG | - | chr5.1:8048697-8048716 | MS.gene20292:CDS | 45.0% |
| !! | GCAGCGAATTTTGACCATTC+TGG | - | chr5.1:8051650-8051669 | MS.gene20292:intron | 45.0% |
| !! | GTGATGGATTCGTAGAGAGA+GGG | + | chr5.1:8048215-8048234 | None:intergenic | 45.0% |
| !! | TTGAGGGCATCCATATAGCA+TGG | + | chr5.1:8050512-8050531 | None:intergenic | 45.0% |
| !! | TTGGGTTGAGTGATCAGCTT+GGG | - | chr5.1:8048804-8048823 | MS.gene20292:CDS | 45.0% |
| !! | TTTGGGTTGAGTGATCAGCT+TGG | - | chr5.1:8048803-8048822 | MS.gene20292:CDS | 45.0% |
| !!! | CCTGATGTAGTTTTGGCACT+GGG | - | chr5.1:8053111-8053130 | MS.gene20292:CDS | 45.0% |
| AGATCCCGATGCCTCAAAAG+AGG | - | chr5.1:8049672-8049691 | MS.gene20292:CDS | 50.0% | |
| AGGAGCAAAACACATGGCAG+TGG | + | chr5.1:8052776-8052795 | None:intergenic | 50.0% | |
| AGGGGTTGCTTGAACCTCTT+TGG | - | chr5.1:8053592-8053611 | MS.gene20292:CDS | 50.0% | |
| ATGCGTTTCGCATCCGAGAA+AGG | - | chr5.1:8048424-8048443 | MS.gene20292:CDS | 50.0% | |
| ATGGATTCGTAGAGAGAGGG+AGG | + | chr5.1:8048212-8048231 | None:intergenic | 50.0% | |
| CAACCGTCATTTGCAGAGCA+AGG | + | chr5.1:8051138-8051157 | None:intergenic | 50.0% | |
| CCCAGTGCCAAAACTACATC+AGG | + | chr5.1:8053114-8053133 | None:intergenic | 50.0% | |
| CTATGGACGGAAGTCGATGT+TGG | - | chr5.1:8048862-8048881 | MS.gene20292:CDS | 50.0% | |
| CTCAATAGTGCCCATTGAGG+AGG | - | chr5.1:8050271-8050290 | MS.gene20292:intron | 50.0% | |
| CTCCTCAATGGGCACTATTG+AGG | + | chr5.1:8050273-8050292 | None:intergenic | 50.0% | |
| GAAATCAACGATTCGCGCTC+CGG | + | chr5.1:8048578-8048597 | None:intergenic | 50.0% | |
| GACCCTTGCTCTGCAAATGA+CGG | - | chr5.1:8051132-8051151 | MS.gene20292:CDS | 50.0% | |
| GCGATTACATGCCTCCTCAA+TGG | + | chr5.1:8050285-8050304 | None:intergenic | 50.0% | |
| GTAGCTGTAACACTGTGGGA+TGG | + | chr5.1:8050842-8050861 | None:intergenic | 50.0% | |
| GTCGATGTTGGAGGCTTATG+GGG | - | chr5.1:8048874-8048893 | MS.gene20292:CDS | 50.0% | |
| GTGCCAGAAGATTCAAGGAG+TGG | - | chr5.1:8048923-8048942 | MS.gene20292:CDS | 50.0% | |
| GTGCTCTCTGCAGTGAATGA+AGG | - | chr5.1:8053240-8053259 | MS.gene20292:CDS | 50.0% | |
| GTTCGCAGATTCCCTATGGA+CGG | - | chr5.1:8048849-8048868 | MS.gene20292:CDS | 50.0% | |
| GTTGAGTGATCAGCTTGGGA+AGG | - | chr5.1:8048808-8048827 | MS.gene20292:CDS | 50.0% | |
| TATGACTTTCGAGGCCTGGT+TGG | - | chr5.1:8049375-8049394 | MS.gene20292:intron | 50.0% | |
| TCCCTCAATAGTGCCCATTG+AGG | - | chr5.1:8050268-8050287 | MS.gene20292:intron | 50.0% | |
| TGCAAGTATGCCATCTCGGA+AGG | - | chr5.1:8050350-8050369 | MS.gene20292:intron | 50.0% | |
| TGCTTCAGCATGAGGATACC+AGG | - | chr5.1:8050984-8051003 | MS.gene20292:CDS | 50.0% | |
| TGGATTCGTAGAGAGAGGGA+GGG | + | chr5.1:8048211-8048230 | None:intergenic | 50.0% | |
| TGTGTGATTCCTGTAGGTGG+TGG | - | chr5.1:8050160-8050179 | MS.gene20292:intron | 50.0% | |
| TTTAGACGCTCCTTCCGAGA+TGG | + | chr5.1:8050363-8050382 | None:intergenic | 50.0% | |
| ! | AAGGTGCTCTGTCCAAGACT+GGG | - | chr5.1:8049958-8049977 | MS.gene20292:intron | 50.0% |
| ! | AGCTACAGGAGGTTGATCAC+TGG | + | chr5.1:8050213-8050232 | None:intergenic | 50.0% |
| ! | ATAGGCAGCCTTATGCAGCA+GGG | + | chr5.1:8050789-8050808 | None:intergenic | 50.0% |
| ! | GGGAGGGGTTTGGAGATTTT+CGG | + | chr5.1:8048282-8048301 | None:intergenic | 50.0% |
| ! | GTCTTGGACAGAGCACCTTA+AGG | + | chr5.1:8049957-8049976 | None:intergenic | 50.0% |
| ! | GTGATACTGACTGATTCCGG+TGG | - | chr5.1:8052961-8052980 | MS.gene20292:CDS | 50.0% |
| ! | GTTAGCTTCTGAGCTACAGG+AGG | + | chr5.1:8050224-8050243 | None:intergenic | 50.0% |
| ! | TAAGGTGCTCTGTCCAAGAC+TGG | - | chr5.1:8049957-8049976 | MS.gene20292:intron | 50.0% |
| ! | TCAGCTTGGGAAGGAGCTTT+TGG | - | chr5.1:8048817-8048836 | MS.gene20292:CDS | 50.0% |
| !! | CAACATCGACTTCCGTCCAT+AGG | + | chr5.1:8048864-8048883 | None:intergenic | 50.0% |
| !! | CACTGCAGAGAGCACAGTTT+TGG | + | chr5.1:8053235-8053254 | None:intergenic | 50.0% |
| !! | GGTGATGGATTCGTAGAGAG+AGG | + | chr5.1:8048216-8048235 | None:intergenic | 50.0% |
| !! | TGAGGCATCGGGATCTTCAA+GGG | + | chr5.1:8049668-8049687 | None:intergenic | 50.0% |
| !! | TGGTGTTTTTGCGGGAAGAG+CGG | + | chr5.1:8048319-8048338 | None:intergenic | 50.0% |
| !! | TTGAGGCATCGGGATCTTCA+AGG | + | chr5.1:8049669-8049688 | None:intergenic | 50.0% |
| !!! | GCCTGATGTAGTTTTGGCAC+TGG | - | chr5.1:8053110-8053129 | MS.gene20292:CDS | 50.0% |
| !!! | TGGTGGTGGTGGTGTTTTTG+CGG | + | chr5.1:8048328-8048347 | None:intergenic | 50.0% |
| ATCAGGCAGCCAAGGCTTTG+CGG | + | chr5.1:8053097-8053116 | None:intergenic | 55.0% | |
| CATCGAGAACCACCACCTAC+AGG | + | chr5.1:8050172-8050191 | None:intergenic | 55.0% | |
| GCTGGGTACCCAAGTAATGG+AGG | - | chr5.1:8052133-8052152 | MS.gene20292:intron | 55.0% | |
| TGATTGGGAACTGGGTTCGG+TGG | + | chr5.1:8048348-8048367 | None:intergenic | 55.0% | |
| TGGACGGAAGTCGATGTTGG+AGG | - | chr5.1:8048865-8048884 | MS.gene20292:CDS | 55.0% | |
| TTGTTGCAGCCGCAAAGCCT+TGG | - | chr5.1:8053085-8053104 | MS.gene20292:CDS | 55.0% | |
| ! | GATAGGCAGCCTTATGCAGC+AGG | + | chr5.1:8050790-8050809 | None:intergenic | 55.0% |
| !! | AGGCATCGGGATCTTCAAGG+GGG | + | chr5.1:8049666-8049685 | None:intergenic | 55.0% |
| !! | GAGGCATCGGGATCTTCAAG+GGG | + | chr5.1:8049667-8049686 | None:intergenic | 55.0% |
| !! | TGTTTTTGCGGGAAGAGCGG+CGG | + | chr5.1:8048316-8048335 | None:intergenic | 55.0% |
| !!! | GGTGGTGGTGGTGTTTTTGC+GGG | + | chr5.1:8048327-8048346 | None:intergenic | 55.0% |
| CGAGCACGTGCTCAACTGCT+TGG | - | chr5.1:8051955-8051974 | MS.gene20292:CDS | 60.0% | |
| !! | TTGGGAACTGGGTTCGGTGG+TGG | + | chr5.1:8048345-8048364 | None:intergenic | 60.0% |
| TTTGCGGGAAGAGCGGCGGA+GGG | + | chr5.1:8048312-8048331 | None:intergenic | 65.0% | |
| ! | TTTTGCGGGAAGAGCGGCGG+AGG | + | chr5.1:8048313-8048332 | None:intergenic | 65.0% |
| !! | ACTGGGTTCGGTGGTGGTGG+TGG | + | chr5.1:8048339-8048358 | None:intergenic | 65.0% |
| !! | GGAACTGGGTTCGGTGGTGG+TGG | + | chr5.1:8048342-8048361 | None:intergenic | 65.0% |
| GGAAGAGCGGCGGAGGGTGG+CGG | + | chr5.1:8048306-8048325 | None:intergenic | 75.0% | |
| ! | GGGTGGCGGTGGGAGGGGTT+TGG | + | chr5.1:8048292-8048311 | None:intergenic | 75.0% |
| ! | GCGGGAAGAGCGGCGGAGGG+TGG | + | chr5.1:8048309-8048328 | None:intergenic | 80.0% |
| !! | AGAGCGGCGGAGGGTGGCGG+TGG | + | chr5.1:8048303-8048322 | None:intergenic | 80.0% |
| !! | GAGCGGCGGAGGGTGGCGGT+GGG | + | chr5.1:8048302-8048321 | None:intergenic | 80.0% |
| !! | GCGGAGGGTGGCGGTGGGAG+GGG | + | chr5.1:8048297-8048316 | None:intergenic | 80.0% |
| !! | GGCGGAGGGTGGCGGTGGGA+GGG | + | chr5.1:8048298-8048317 | None:intergenic | 80.0% |
| !! | CGGCGGAGGGTGGCGGTGGG+AGG | + | chr5.1:8048299-8048318 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 8048062 | 8053668 | 8048062 | ID=MS.gene20292 |
| chr5.1 | mRNA | 8048062 | 8053668 | 8048062 | ID=MS.gene20292.t1;Parent=MS.gene20292 |
| chr5.1 | exon | 8052610 | 8053668 | 8052610 | ID=MS.gene20292.t1.exon1;Parent=MS.gene20292.t1 |
| chr5.1 | CDS | 8052610 | 8053668 | 8052610 | ID=cds.MS.gene20292.t1;Parent=MS.gene20292.t1 |
| chr5.1 | exon | 8051656 | 8052120 | 8051656 | ID=MS.gene20292.t1.exon2;Parent=MS.gene20292.t1 |
| chr5.1 | CDS | 8051656 | 8052120 | 8051656 | ID=cds.MS.gene20292.t1;Parent=MS.gene20292.t1 |
| chr5.1 | exon | 8050490 | 8051554 | 8050490 | ID=MS.gene20292.t1.exon3;Parent=MS.gene20292.t1 |
| chr5.1 | CDS | 8050490 | 8051554 | 8050490 | ID=cds.MS.gene20292.t1;Parent=MS.gene20292.t1 |
| chr5.1 | exon | 8049576 | 8049795 | 8049576 | ID=MS.gene20292.t1.exon4;Parent=MS.gene20292.t1 |
| chr5.1 | CDS | 8049576 | 8049795 | 8049576 | ID=cds.MS.gene20292.t1;Parent=MS.gene20292.t1 |
| chr5.1 | exon | 8048062 | 8049035 | 8048062 | ID=MS.gene20292.t1.exon5;Parent=MS.gene20292.t1 |
| chr5.1 | CDS | 8048062 | 8049035 | 8048062 | ID=cds.MS.gene20292.t1;Parent=MS.gene20292.t1 |
| Gene Sequence |
| Protein sequence |
