Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051816.t1 | XP_013458421.2 | 98.9 | 369 | 3 | 1 | 1 | 369 | 1 | 368 | 2.30E-208 | 734.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051816.t1 | Q6AWY6 | 39.2 | 365 | 173 | 13 | 9 | 363 | 53 | 378 | 1.0e-42 | 175.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051816.t1 | A0A396IG50 | 98.9 | 369 | 3 | 1 | 1 | 369 | 1 | 368 | 1.7e-208 | 734.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051816.t1 | TF | GRF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049660 | MS.gene051816 | 0.800247 | 1.58E-48 | -1.69E-46 |
| MS.gene049989 | MS.gene051816 | 0.827189 | 1.79E-54 | -1.69E-46 |
| MS.gene05054 | MS.gene051816 | 0.803917 | 2.77E-49 | -1.69E-46 |
| MS.gene051629 | MS.gene051816 | 0.818742 | 1.67E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene051955 | 0.827303 | 1.69E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene052367 | 0.827636 | 1.40E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene053173 | 0.806419 | 8.30E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene053348 | 0.81249 | 4.13E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene053416 | 0.811277 | 7.59E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene053417 | 0.816527 | 5.28E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene054551 | 0.815286 | 9.99E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene054593 | 0.82498 | 6.01E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene054885 | 0.811041 | 8.54E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene055308 | 0.832903 | 7.25E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene055578 | 0.803671 | 3.12E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene055957 | 0.835372 | 1.74E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene056041 | 0.84906 | 4.12E-60 | -1.69E-46 |
| MS.gene051816 | MS.gene056042 | 0.808291 | 3.33E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene05640 | 0.821406 | 4.11E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene056526 | 0.830576 | 2.72E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene056528 | 0.835082 | 2.06E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene057458 | 0.848502 | 5.88E-60 | -1.69E-46 |
| MS.gene051816 | MS.gene058196 | 0.814618 | 1.41E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene058197 | 0.806181 | 9.32E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene058198 | 0.806331 | 8.67E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene058827 | 0.822814 | 1.94E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene058853 | 0.824553 | 7.58E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene059553 | 0.816879 | 4.40E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene060473 | 0.853078 | 3.03E-61 | -1.69E-46 |
| MS.gene051816 | MS.gene060565 | 0.854941 | 8.80E-62 | -1.69E-46 |
| MS.gene051816 | MS.gene06093 | 0.839588 | 1.45E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene061099 | 0.828895 | 6.97E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene061260 | 0.835027 | 2.13E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene061275 | 0.829986 | 3.79E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene061303 | 0.811538 | 6.66E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene061706 | 0.806147 | 9.47E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene063035 | 0.826468 | 2.67E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene063037 | 0.804007 | 2.66E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene063095 | 0.8459 | 3.04E-59 | -1.69E-46 |
| MS.gene051816 | MS.gene064730 | 0.835081 | 2.07E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene064834 | 0.835919 | 1.27E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene066026 | 0.808113 | 3.63E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene066551 | 0.802487 | 5.48E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene066552 | 0.82678 | 2.25E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene067030 | 0.81384 | 2.09E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene067143 | 0.802136 | 6.47E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene067144 | 0.81614 | 6.45E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene068197 | 0.814558 | 1.45E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene069090 | 0.806771 | 7.00E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene070273 | 0.802893 | 4.52E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene07048 | 0.806654 | 7.41E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene07051 | 0.837704 | 4.44E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene070800 | 0.814555 | 1.45E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene072702 | 0.846418 | 2.20E-59 | -1.69E-46 |
| MS.gene051816 | MS.gene072952 | 0.804262 | 2.35E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene072954 | 0.810924 | 9.05E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene072956 | 0.812496 | 4.12E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene072963 | 0.811865 | 5.65E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene073698 | 0.822488 | 2.31E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene073862 | 0.811984 | 5.33E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene08109 | 0.803809 | 2.92E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene08836 | 0.868747 | 5.19E-66 | -1.69E-46 |
| MS.gene051816 | MS.gene08848 | 0.805291 | 1.43E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene08988 | 0.844226 | 8.62E-59 | -1.69E-46 |
| MS.gene051816 | MS.gene09014 | 0.81973 | 9.96E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene09234 | 0.824011 | 1.02E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene09245 | 0.828062 | 1.11E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene09258 | 0.86703 | 1.85E-65 | -1.69E-46 |
| MS.gene051816 | MS.gene09540 | 0.824039 | 1.00E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene09543 | 0.825533 | 4.45E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene09594 | 0.837074 | 6.44E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene09808 | 0.833935 | 4.01E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene20224 | 0.866474 | 2.78E-65 | -1.69E-46 |
| MS.gene051816 | MS.gene20292 | 0.80571 | 1.17E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene21320 | 0.833333 | 5.66E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene21734 | 0.802952 | 4.39E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene21888 | 0.811519 | 6.72E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene22383 | 0.812081 | 5.07E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene22464 | 0.838487 | 2.79E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene22500 | 0.854458 | 1.21E-61 | -1.69E-46 |
| MS.gene051816 | MS.gene23323 | 0.853314 | 2.59E-61 | -1.69E-46 |
| MS.gene051816 | MS.gene23886 | 0.832321 | 1.01E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene24503 | 0.833425 | 5.37E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene24543 | 0.851434 | 8.90E-61 | -1.69E-46 |
| MS.gene051816 | MS.gene24735 | 0.801122 | 1.04E-48 | -1.69E-46 |
| MS.gene051816 | MS.gene24830 | 0.992213 | 5.84E-192 | -1.69E-46 |
| MS.gene051816 | MS.gene25731 | 0.81115 | 8.08E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene25797 | 0.806329 | 8.67E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene26114 | 0.820689 | 6.01E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene26508 | 0.959497 | 1.66E-117 | -1.69E-46 |
| MS.gene051816 | MS.gene26619 | 0.829663 | 4.54E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene26706 | 0.83202 | 1.20E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene27811 | 0.840582 | 7.97E-58 | -1.69E-46 |
| MS.gene051816 | MS.gene27812 | 0.847302 | 1.26E-59 | -1.69E-46 |
| MS.gene051816 | MS.gene27817 | 0.812913 | 3.34E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene27902 | 0.821362 | 4.20E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene28807 | 0.848964 | 4.38E-60 | -1.69E-46 |
| MS.gene051816 | MS.gene28867 | 0.845031 | 5.23E-59 | -1.69E-46 |
| MS.gene051816 | MS.gene31651 | 0.838903 | 2.18E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene31653 | 0.818064 | 2.38E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene32467 | 0.809794 | 1.59E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene32975 | 0.827839 | 1.25E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene34313 | 0.815539 | 8.78E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene34315 | 0.817113 | 3.90E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene35150 | 0.86893 | 4.53E-66 | -1.69E-46 |
| MS.gene051816 | MS.gene35715 | 0.812162 | 4.87E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene36485 | 0.857956 | 1.15E-62 | -1.69E-46 |
| MS.gene051816 | MS.gene37495 | 0.81891 | 1.53E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene37573 | 0.805115 | 1.56E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene37925 | 0.83712 | 6.27E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene38675 | 0.802636 | 5.11E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene39058 | 0.821456 | 4.00E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene39538 | 0.806144 | 9.49E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene40143 | 0.835158 | 1.97E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene40329 | 0.833142 | 6.32E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene40405 | 0.86742 | 1.39E-65 | -1.69E-46 |
| MS.gene051816 | MS.gene41273 | 0.805303 | 1.42E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene42286 | 0.817464 | 3.25E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene43391 | 0.80345 | 3.47E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene44052 | 0.808156 | 3.56E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene44100 | 0.843884 | 1.06E-58 | -1.69E-46 |
| MS.gene051816 | MS.gene44103 | 0.841159 | 5.63E-58 | -1.69E-46 |
| MS.gene051816 | MS.gene44251 | 0.842007 | 3.36E-58 | -1.69E-46 |
| MS.gene051816 | MS.gene44386 | 0.818736 | 1.68E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene47007 | 0.826759 | 2.27E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene47439 | 0.830729 | 2.49E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene48067 | 0.833556 | 4.98E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene48406 | 0.818005 | 2.46E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene49312 | 0.829427 | 5.18E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene49961 | 0.802733 | 4.88E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene50479 | 0.809396 | 1.93E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene50484 | 0.870856 | 1.06E-66 | -1.69E-46 |
| MS.gene051816 | MS.gene50613 | 0.832129 | 1.13E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene50736 | 0.856491 | 3.10E-62 | -1.69E-46 |
| MS.gene051816 | MS.gene52607 | 0.835183 | 1.95E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene52624 | 0.824922 | 6.21E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene52703 | 0.830856 | 2.32E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene52772 | 0.837316 | 5.59E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene52980 | 0.817521 | 3.16E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene53408 | 0.841824 | 3.76E-58 | -1.69E-46 |
| MS.gene051816 | MS.gene53887 | 0.827103 | 1.88E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene54040 | 0.838645 | 2.54E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene54464 | 0.809307 | 2.02E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene55687 | 0.800196 | 1.61E-48 | -1.69E-46 |
| MS.gene051816 | MS.gene55817 | 0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene56561 | 0.834414 | 3.04E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene57219 | 0.847744 | 9.53E-60 | -1.69E-46 |
| MS.gene051816 | MS.gene57751 | 0.869069 | 4.08E-66 | -1.69E-46 |
| MS.gene051816 | MS.gene57752 | 0.835961 | 1.24E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene58234 | 0.869312 | 3.40E-66 | -1.69E-46 |
| MS.gene051816 | MS.gene58754 | 0.852978 | 3.24E-61 | -1.69E-46 |
| MS.gene051816 | MS.gene58835 | 0.820762 | 5.78E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene59357 | 0.816912 | 4.33E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene59370 | 0.815411 | 9.37E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene61081 | 0.80445 | 2.15E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene61112 | 0.80956 | 1.78E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene61977 | 0.832945 | 7.08E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene62208 | 0.806926 | 6.49E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene63320 | 0.80976 | 1.61E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene63469 | 0.810509 | 1.11E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene64538 | 0.800506 | 1.40E-48 | -1.69E-46 |
| MS.gene051816 | MS.gene64852 | 0.807313 | 5.37E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene64859 | 0.811372 | 7.24E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene65301 | 0.830326 | 3.13E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene65431 | 0.801329 | 9.48E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene66429 | 0.82151 | 3.89E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene67548 | 0.822954 | 1.80E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene67555 | 0.827149 | 1.83E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene69328 | 0.83698 | 6.81E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene69721 | 0.809769 | 1.61E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene70263 | 0.818113 | 2.32E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene70403 | 0.819349 | 1.22E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene70494 | 0.812095 | 5.04E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene71431 | 0.851443 | 8.85E-61 | -1.69E-46 |
| MS.gene051816 | MS.gene73305 | 0.807525 | 4.84E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene73897 | 0.827978 | 1.16E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene74328 | 0.818611 | 1.79E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene75318 | 0.834429 | 3.01E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene75320 | 0.80903 | 2.31E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene75579 | 0.80915 | 2.18E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene75642 | 0.87738 | 6.58E-69 | -1.69E-46 |
| MS.gene051816 | MS.gene75737 | 0.800143 | 1.66E-48 | -1.69E-46 |
| MS.gene051816 | MS.gene77475 | 0.80571 | 1.17E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene77476 | 0.80151 | 8.70E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene77563 | 0.838588 | 2.63E-57 | -1.69E-46 |
| MS.gene051816 | MS.gene78156 | 0.827977 | 1.16E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene78972 | 0.817142 | 3.84E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene79251 | 0.831665 | 1.47E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene79921 | 0.860682 | 1.74E-63 | -1.69E-46 |
| MS.gene051816 | MS.gene80276 | 0.812122 | 4.97E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene83963 | 0.801909 | 7.21E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene84014 | 0.8321 | 1.15E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene89653 | 0.807692 | 4.47E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene90302 | 0.816692 | 4.85E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene90378 | 0.827778 | 1.30E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene90380 | 0.805919 | 1.06E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene90876 | 0.844692 | 6.46E-59 | -1.69E-46 |
| MS.gene051816 | MS.gene91412 | 0.804315 | 2.29E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene91551 | 0.810397 | 1.18E-50 | -1.69E-46 |
| MS.gene051816 | MS.gene91723 | 0.803911 | 2.78E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene93102 | 0.841435 | 4.76E-58 | -1.69E-46 |
| MS.gene051816 | MS.gene96186 | 0.801704 | 7.94E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene96390 | 0.844018 | 9.80E-59 | -1.69E-46 |
| MS.gene051816 | MS.gene97701 | 0.803985 | 2.68E-49 | -1.69E-46 |
| MS.gene051816 | MS.gene97703 | 0.815933 | 7.17E-52 | -1.69E-46 |
| MS.gene051816 | MS.gene98136 | 0.810762 | 9.81E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene99337 | 0.852585 | 4.19E-61 | -1.69E-46 |
| MS.gene051816 | MS.gene99432 | 0.824369 | 8.38E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051816.t1 | MTR_4g125490 | 98.910 | 367 | 3 | 1 | 1 | 367 | 1 | 366 | 0.0 | 750 |
| MS.gene051816.t1 | MTR_2g041430 | 61.680 | 381 | 103 | 12 | 5 | 369 | 3 | 356 | 7.08e-140 | 402 |
| MS.gene051816.t1 | MTR_2g041430 | 61.804 | 377 | 101 | 12 | 5 | 365 | 3 | 352 | 2.99e-138 | 397 |
| MS.gene051816.t1 | MTR_2g041430 | 61.804 | 377 | 101 | 12 | 5 | 365 | 3 | 352 | 3.16e-138 | 397 |
| MS.gene051816.t1 | MTR_8g020560 | 42.740 | 365 | 155 | 16 | 1 | 338 | 1 | 338 | 1.17e-68 | 219 |
| MS.gene051816.t1 | MTR_0001s0490 | 39.266 | 354 | 147 | 14 | 9 | 352 | 25 | 320 | 2.62e-55 | 185 |
| MS.gene051816.t1 | MTR_5g027030 | 60.550 | 109 | 31 | 2 | 9 | 117 | 16 | 112 | 1.31e-39 | 143 |
| MS.gene051816.t1 | MTR_1g017490 | 56.897 | 116 | 44 | 2 | 7 | 117 | 9 | 123 | 1.43e-39 | 147 |
| MS.gene051816.t1 | MTR_1g017490 | 56.897 | 116 | 44 | 2 | 7 | 117 | 142 | 256 | 1.88e-39 | 148 |
| MS.gene051816.t1 | MTR_7g104050 | 53.383 | 133 | 41 | 4 | 6 | 124 | 68 | 193 | 5.86e-37 | 137 |
| MS.gene051816.t1 | MTR_7g104050 | 53.383 | 133 | 41 | 4 | 6 | 124 | 68 | 193 | 7.19e-37 | 137 |
| MS.gene051816.t1 | MTR_3g092330 | 48.739 | 119 | 42 | 4 | 9 | 127 | 113 | 212 | 4.13e-27 | 112 |
| MS.gene051816.t1 | MTR_8g035910 | 45.536 | 112 | 47 | 3 | 6 | 117 | 46 | 143 | 4.98e-21 | 94.4 |
| MS.gene051816.t1 | MTR_8g035910 | 43.750 | 80 | 34 | 2 | 73 | 152 | 297 | 365 | 4.99e-13 | 70.5 |
| MS.gene051816.t1 | MTR_8g035640 | 64.103 | 39 | 14 | 0 | 73 | 111 | 51 | 89 | 1.66e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051816.t1 | AT3G13960 | 71.053 | 114 | 27 | 3 | 7 | 117 | 14 | 124 | 4.08e-52 | 178 |
| MS.gene051816.t1 | AT2G06200 | 66.667 | 120 | 29 | 2 | 7 | 115 | 43 | 162 | 3.48e-48 | 164 |
| MS.gene051816.t1 | AT2G06200 | 66.667 | 120 | 29 | 2 | 7 | 115 | 4 | 123 | 4.55e-48 | 163 |
| MS.gene051816.t1 | AT4G37740 | 55.118 | 127 | 52 | 3 | 9 | 134 | 164 | 286 | 3.54e-41 | 152 |
| MS.gene051816.t1 | AT2G36400 | 57.377 | 122 | 43 | 3 | 10 | 125 | 77 | 195 | 6.64e-37 | 138 |
| MS.gene051816.t1 | AT2G22840 | 57.143 | 112 | 44 | 2 | 7 | 117 | 131 | 239 | 1.29e-34 | 134 |
| MS.gene051816.t1 | AT3G52910 | 53.390 | 118 | 39 | 3 | 10 | 117 | 83 | 194 | 3.85e-33 | 127 |
| MS.gene051816.t1 | AT5G53660 | 50.000 | 110 | 38 | 2 | 8 | 117 | 58 | 150 | 6.34e-27 | 110 |
| MS.gene051816.t1 | AT2G06200 | 92.157 | 51 | 2 | 1 | 67 | 115 | 1 | 51 | 5.60e-26 | 102 |
| MS.gene051816.t1 | AT4G24150 | 42.149 | 121 | 64 | 2 | 2 | 117 | 104 | 223 | 7.75e-23 | 99.4 |
| MS.gene051816.t1 | AT4G24150 | 42.149 | 121 | 64 | 2 | 2 | 117 | 142 | 261 | 1.33e-22 | 99.4 |
| MS.gene051816.t1 | AT4G24150 | 36.986 | 146 | 61 | 3 | 2 | 117 | 142 | 286 | 8.73e-21 | 94.0 |
| MS.gene051816.t1 | AT2G45480 | 41.441 | 111 | 64 | 1 | 5 | 114 | 19 | 129 | 1.73e-18 | 85.5 |
| MS.gene051816.t1 | AT2G45480 | 41.441 | 111 | 64 | 1 | 5 | 114 | 17 | 127 | 6.59e-18 | 85.1 |
| MS.gene051816.t1 | AT2G45480 | 41.935 | 93 | 42 | 3 | 70 | 155 | 301 | 388 | 8.78e-13 | 69.7 |
| MS.gene051816.t1 | AT2G45480 | 41.441 | 111 | 64 | 1 | 5 | 114 | 19 | 129 | 6.91e-18 | 85.1 |
| MS.gene051816.t1 | AT2G45480 | 41.935 | 93 | 42 | 3 | 70 | 155 | 303 | 390 | 9.08e-13 | 69.7 |
Find 80 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGAGTTTCTGCTGCTTT+TGG | 0.148849 | 8.2:+7220452 | None:intergenic |
| TGAAGGAACAGGTATGTTTA+TGG | 0.231611 | 8.2:-7220789 | MS.gene051816:intron |
| TGCCACTGAGTTGGAGTAAA+AGG | 0.276188 | 8.2:+7221865 | None:intergenic |
| CTTCTGCACCTCCCTGGCTC+TGG | 0.278943 | 8.2:+7221577 | None:intergenic |
| CCCTTGTTTCTTGACAATAC+TGG | 0.290985 | 8.2:-7221208 | MS.gene051816:CDS |
| CAGAAACTCATGGCTTGATT+TGG | 0.299180 | 8.2:-7220442 | MS.gene051816:CDS |
| GCTTTCTTCACTGAACCTTC+TGG | 0.302685 | 8.2:-7220741 | MS.gene051816:CDS |
| CTTTCACAGTACTTTGAATC+TGG | 0.319625 | 8.2:+7221514 | None:intergenic |
| AAAAGAGGAAGAGGAGCTTA+TGG | 0.356828 | 8.2:+7220659 | None:intergenic |
| CTTCTTCAATGGATGATTCA+TGG | 0.368355 | 8.2:-7220698 | MS.gene051816:CDS |
| TTCTGCACCTCCCTGGCTCT+GGG | 0.368474 | 8.2:+7221578 | None:intergenic |
| ATCTACAAATACATGGCTTC+TGG | 0.368517 | 8.2:-7221820 | MS.gene051816:CDS |
| TTGTCTTGAAATGAGAAGTT+AGG | 0.391585 | 8.2:+7221238 | None:intergenic |
| AGAGGAAAGGGTGGTTAAGA+TGG | 0.391821 | 8.2:+7221284 | None:intergenic |
| GAACTATTTACCAATGGGAT+TGG | 0.400450 | 8.2:-7221614 | MS.gene051816:CDS |
| TTTAAACAGAGAAATTGTTC+TGG | 0.401538 | 8.2:-7220639 | MS.gene051816:CDS |
| TTCATCGTTTCTTTGATGAA+TGG | 0.411092 | 8.2:-7220479 | MS.gene051816:CDS |
| AACTATTTACCAATGGGATT+GGG | 0.420553 | 8.2:-7221613 | MS.gene051816:CDS |
| CCATTTACCTCGTTGGTTTG+TGG | 0.423824 | 8.2:+7220347 | None:intergenic |
| GCCTTGAGGATGGAGGGTTA+TGG | 0.442680 | 8.2:+7221260 | None:intergenic |
| AAGTTTATCAGCTTCTTCAA+TGG | 0.445043 | 8.2:-7220709 | MS.gene051816:CDS |
| GAGGGTTATGGTAGAGGAAA+GGG | 0.446918 | 8.2:+7221272 | None:intergenic |
| TTGATAGTGAGTAGAAGATC+AGG | 0.446923 | 8.2:+7221784 | None:intergenic |
| AAGCATAAGAAGAGTGTTGA+GGG | 0.452542 | 8.2:+7221311 | None:intergenic |
| TCTGTTCTTCTGCACCTCCC+TGG | 0.454328 | 8.2:+7221571 | None:intergenic |
| ACAATTTCTCTGTTTAAAAG+AGG | 0.457057 | 8.2:+7220644 | None:intergenic |
| GAGGAAAGGGTGGTTAAGAT+GGG | 0.457253 | 8.2:+7221285 | None:intergenic |
| GAGTAGAAGATCAGGAGGAA+TGG | 0.465599 | 8.2:+7221792 | None:intergenic |
| GTAAGAGTACTCATTGTCAT+TGG | 0.465700 | 8.2:+7220611 | None:intergenic |
| CTTCCACAGGCTTTCTTGAA+CGG | 0.472599 | 8.2:+7221470 | None:intergenic |
| GGATGGAACTATTTACCAAT+GGG | 0.479254 | 8.2:-7221619 | MS.gene051816:CDS |
| CAATGATGAATGGAAGAAAC+AGG | 0.479723 | 8.2:-7221891 | MS.gene051816:CDS |
| GAAGAACAGATGGAAAGAAA+TGG | 0.480263 | 8.2:-7221558 | MS.gene051816:CDS |
| ATAACAACAACACTGATTGC+AGG | 0.480287 | 8.2:-7221171 | MS.gene051816:intron |
| AAGAAGAGTGTTGAGGGTAA+TGG | 0.482978 | 8.2:+7221317 | None:intergenic |
| GATCAAGGTTGTTACATCTC+AGG | 0.490399 | 8.2:-7220552 | MS.gene051816:CDS |
| TCTCTGTTTAAAAGAGGAAG+AGG | 0.498513 | 8.2:+7220650 | None:intergenic |
| TAACAAACAACAATGATGAA+TGG | 0.501615 | 8.2:-7221901 | None:intergenic |
| AGGATGGAGGGTTATGGTAG+AGG | 0.503413 | 8.2:+7221266 | None:intergenic |
| GTGTGGTGCATGCAGTTGGA+TGG | 0.510680 | 8.2:-7221636 | MS.gene051816:intron |
| TCAAGCTCTTGCCACTGAGT+TGG | 0.513392 | 8.2:+7221856 | None:intergenic |
| TTATGGACTGAAAGAGGAGG+TGG | 0.522907 | 8.2:-7220772 | MS.gene051816:CDS |
| GAAGAGGAGCTTATGGTAAG+TGG | 0.526833 | 8.2:+7220666 | None:intergenic |
| AAGATTGTTGAAGTAGCAGC+AGG | 0.534940 | 8.2:+7221418 | None:intergenic |
| ATCATGAGAAGATGTAGGAA+TGG | 0.536076 | 8.2:+7220386 | None:intergenic |
| ACCAGTATTGTCAAGAAACA+AGG | 0.541001 | 8.2:+7221207 | None:intergenic |
| AAACAACCACAGCAAGATCA+AGG | 0.541674 | 8.2:-7220567 | MS.gene051816:CDS |
| AGAGAAACCATTTACCTCGT+TGG | 0.542197 | 8.2:+7220340 | None:intergenic |
| GTGAAATCATGAGAAGATGT+AGG | 0.543173 | 8.2:+7220381 | None:intergenic |
| GTGAAAGGCACATGCATAGA+GGG | 0.547205 | 8.2:-7221498 | MS.gene051816:CDS |
| GAAGCATAAGAAGAGTGTTG+AGG | 0.548399 | 8.2:+7221310 | None:intergenic |
| GGAGGGTTATGGTAGAGGAA+AGG | 0.556801 | 8.2:+7221271 | None:intergenic |
| GAACAGATGGAAAGAAATGG+AGG | 0.559737 | 8.2:-7221555 | MS.gene051816:CDS |
| TGGATGGAACTATTTACCAA+TGG | 0.564553 | 8.2:-7221620 | MS.gene051816:CDS |
| GAAGAAACATTCATGAAACA+TGG | 0.569282 | 8.2:-7220525 | MS.gene051816:CDS |
| ATAGTGAGTAGAAGATCAGG+AGG | 0.571348 | 8.2:+7221787 | None:intergenic |
| CAGATTCAAAGTACTGTGAA+AGG | 0.571794 | 8.2:-7221513 | MS.gene051816:CDS |
| GGGAGGTGCAGAAGAACAGA+TGG | 0.577454 | 8.2:-7221568 | MS.gene051816:CDS |
| AAACTTCTTATAGTTCCAGA+AGG | 0.579842 | 8.2:+7220726 | None:intergenic |
| AAGTTAGGCCTTGAGGATGG+AGG | 0.587194 | 8.2:+7221253 | None:intergenic |
| ACCATAACCCTCCATCCTCA+AGG | 0.592083 | 8.2:-7221261 | MS.gene051816:CDS |
| AAATGAGAAGTTAGGCCTTG+AGG | 0.594153 | 8.2:+7221246 | None:intergenic |
| AGTTAGGCCTTGAGGATGGA+GGG | 0.597805 | 8.2:+7221254 | None:intergenic |
| GTATGTTTATGGACTGAAAG+AGG | 0.601366 | 8.2:-7220778 | MS.gene051816:CDS |
| AAGAAACATTCATGAAACAT+GGG | 0.603745 | 8.2:-7220524 | MS.gene051816:CDS |
| GAGAAGTTAGGCCTTGAGGA+TGG | 0.604526 | 8.2:+7221250 | None:intergenic |
| CCAAAAGCAGCAGAAACTCA+TGG | 0.605608 | 8.2:-7220452 | MS.gene051816:CDS |
| AGCTCTTATCTACAAATACA+TGG | 0.606523 | 8.2:-7221827 | MS.gene051816:CDS |
| AGTGTTGTTGTTATTGTGAG+AGG | 0.610925 | 8.2:+7221180 | None:intergenic |
| GGAGATTGAAAGCTGAGTGG+TGG | 0.613550 | 8.2:+7220407 | None:intergenic |
| TAACAACCTTGATCTTGCTG+TGG | 0.626299 | 8.2:+7220561 | None:intergenic |
| TGTGAAAGGCACATGCATAG+AGG | 0.626931 | 8.2:-7221499 | MS.gene051816:CDS |
| AAACCGTTCAAGAAAGCCTG+TGG | 0.641388 | 8.2:-7221473 | MS.gene051816:CDS |
| TGTTTATGGACTGAAAGAGG+AGG | 0.650765 | 8.2:-7220775 | MS.gene051816:CDS |
| CCAGTATTGTCAAGAAACAA+GGG | 0.652005 | 8.2:+7221208 | None:intergenic |
| AAATAGACCCAGAGCCAGGG+AGG | 0.659120 | 8.2:-7221585 | MS.gene051816:CDS |
| GGTTATGGTAGAGGAAAGGG+TGG | 0.659870 | 8.2:+7221275 | None:intergenic |
| TTTAGTTCCACAAACCAACG+AGG | 0.729736 | 8.2:-7220354 | MS.gene051816:intron |
| AATGGAGATTGAAAGCTGAG+TGG | 0.781428 | 8.2:+7220404 | None:intergenic |
| TTACAGTGTTGAGACTGATG+AGG | 0.793602 | 8.2:+7221730 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATGGTAAAAATTATTAT+TGG | + | chr8.2:7221701-7221720 | None:intergenic | 15.0% |
| !! | TAATTGAATGTAAATTATCA+TGG | - | chr8.2:7221836-7221855 | MS.gene051816:CDS | 15.0% |
| !! | TATATATAGTCATTCATATA+TGG | + | chr8.2:7220144-7220163 | None:intergenic | 15.0% |
| !!! | AGTTTTTCTCAAATTATTAT+CGG | + | chr8.2:7221638-7221657 | None:intergenic | 15.0% |
| !! | AGAGAACTTATAAAAATAAG+TGG | - | chr8.2:7220853-7220872 | MS.gene051816:intron | 20.0% |
| !!! | CTTATCGATTATAAACTTAT+AGG | + | chr8.2:7220795-7220814 | None:intergenic | 20.0% |
| !!! | TTAAGTTGTTTATTCAAACA+TGG | + | chr8.2:7220723-7220742 | None:intergenic | 20.0% |
| !!! | TTTATGAAAGATTCTCTTTT+TGG | - | chr8.2:7221006-7221025 | MS.gene051816:intron | 20.0% |
| ! | AAGAAACATTCATGAAACAT+GGG | - | chr8.2:7221309-7221328 | MS.gene051816:CDS | 25.0% |
| ! | ACAATTTCTCTGTTTAAAAG+AGG | + | chr8.2:7221192-7221211 | None:intergenic | 25.0% |
| ! | CTTTAAACCAACACATATTT+AGG | - | chr8.2:7220697-7220716 | MS.gene051816:CDS | 25.0% |
| ! | TGAGTTTCGCAAATTATTAT+TGG | + | chr8.2:7221816-7221835 | None:intergenic | 25.0% |
| ! | TTTAAACAGAGAAATTGTTC+TGG | - | chr8.2:7221194-7221213 | MS.gene051816:CDS | 25.0% |
| AAACGATGAAAAATCTTCTG+AGG | + | chr8.2:7221344-7221363 | None:intergenic | 30.0% | |
| AAACTTCTTATAGTTCCAGA+AGG | + | chr8.2:7221110-7221129 | None:intergenic | 30.0% | |
| AACTATTTACCAATGGGATT+GGG | - | chr8.2:7220220-7220239 | MS.gene051816:intron | 30.0% | |
| AAGTTTATCAGCTTCTTCAA+TGG | - | chr8.2:7221124-7221143 | MS.gene051816:intron | 30.0% | |
| AGCTCTTATCTACAAATACA+TGG | - | chr8.2:7220006-7220025 | MS.gene051816:intron | 30.0% | |
| AGTGATTAGTGATTTCTCAT+TGG | - | chr8.2:7221862-7221881 | MS.gene051816:CDS | 30.0% | |
| GAAGAAACATTCATGAAACA+TGG | - | chr8.2:7221308-7221327 | MS.gene051816:CDS | 30.0% | |
| TCAAATAGTCCAATCCAAAA+AGG | - | chr8.2:7220945-7220964 | MS.gene051816:intron | 30.0% | |
| TTACAAACACATACACAACA+CGG | - | chr8.2:7221779-7221798 | MS.gene051816:CDS | 30.0% | |
| TTCATCGTTTCTTTGATGAA+TGG | - | chr8.2:7221354-7221373 | MS.gene051816:CDS | 30.0% | |
| TTGTCTTGAAATGAGAAGTT+AGG | + | chr8.2:7220598-7220617 | None:intergenic | 30.0% | |
| TTTCCTCAAATTATCACCTA+TGG | + | chr8.2:7221575-7221594 | None:intergenic | 30.0% | |
| ! | GGTATTGTTGTTATCTTTGA+AGG | - | chr8.2:7221027-7221046 | MS.gene051816:intron | 30.0% |
| ! | TATGTATGCACTTGTTGATT+TGG | - | chr8.2:7220175-7220194 | MS.gene051816:intron | 30.0% |
| !! | ATTTCTCATTGGCTTGAATT+TGG | - | chr8.2:7221873-7221892 | MS.gene051816:CDS | 30.0% |
| AACATGGCCTAAATATGTGT+TGG | + | chr8.2:7220707-7220726 | None:intergenic | 35.0% | |
| ACCAGTATTGTCAAGAAACA+AGG | + | chr8.2:7220629-7220648 | None:intergenic | 35.0% | |
| ATCATGAGAAGATGTAGGAA+TGG | + | chr8.2:7221450-7221469 | None:intergenic | 35.0% | |
| ATCTACAAATACATGGCTTC+TGG | - | chr8.2:7220013-7220032 | MS.gene051816:intron | 35.0% | |
| CAATCCAAAAAGGTTCATGA+TGG | - | chr8.2:7220955-7220974 | MS.gene051816:intron | 35.0% | |
| CCAGTATTGTCAAGAAACAA+GGG | + | chr8.2:7220628-7220647 | None:intergenic | 35.0% | |
| CTTCTTCAATGGATGATTCA+TGG | - | chr8.2:7221135-7221154 | MS.gene051816:intron | 35.0% | |
| CTTTCACAGTACTTTGAATC+TGG | + | chr8.2:7220322-7220341 | None:intergenic | 35.0% | |
| GAACTATTTACCAATGGGAT+TGG | - | chr8.2:7220219-7220238 | MS.gene051816:intron | 35.0% | |
| GAAGAACAGATGGAAAGAAA+TGG | - | chr8.2:7220275-7220294 | MS.gene051816:intron | 35.0% | |
| GGATGGAACTATTTACCAAT+GGG | - | chr8.2:7220214-7220233 | MS.gene051816:intron | 35.0% | |
| GTGAAATCATGAGAAGATGT+AGG | + | chr8.2:7221455-7221474 | None:intergenic | 35.0% | |
| TCTCTGTTTAAAAGAGGAAG+AGG | + | chr8.2:7221186-7221205 | None:intergenic | 35.0% | |
| TGAAGGAACAGGTATGTTTA+TGG | - | chr8.2:7221044-7221063 | MS.gene051816:intron | 35.0% | |
| TGGATGGAACTATTTACCAA+TGG | - | chr8.2:7220213-7220232 | MS.gene051816:intron | 35.0% | |
| ! | AGTGTTGTTGTTATTGTGAG+AGG | + | chr8.2:7220656-7220675 | None:intergenic | 35.0% |
| ! | ATAACAACAACACTGATTGC+AGG | - | chr8.2:7220662-7220681 | MS.gene051816:CDS | 35.0% |
| ! | ATTTTTCTTCCCAATCCCAT+TGG | + | chr8.2:7220232-7220251 | None:intergenic | 35.0% |
| ! | CATCATGAACCTTTTTGGAT+TGG | + | chr8.2:7220957-7220976 | None:intergenic | 35.0% |
| ! | GTATGTTTATGGACTGAAAG+AGG | - | chr8.2:7221055-7221074 | MS.gene051816:intron | 35.0% |
| ! | GTTGTTATCTTTGAAGGAAC+AGG | - | chr8.2:7221033-7221052 | MS.gene051816:intron | 35.0% |
| !! | AAGCATAAGAAGAGTGTTGA+GGG | + | chr8.2:7220525-7220544 | None:intergenic | 35.0% |
| !! | ATTATCGGTGTTGATGTGTT+TGG | + | chr8.2:7221623-7221642 | None:intergenic | 35.0% |
| !! | CAGATTCAAAGTACTGTGAA+AGG | - | chr8.2:7220320-7220339 | MS.gene051816:intron | 35.0% |
| !! | GTAAGAGTACTCATTGTCAT+TGG | + | chr8.2:7221225-7221244 | None:intergenic | 35.0% |
| !! | GTTGTTTTCAAAACTTCCAC+AGG | + | chr8.2:7220379-7220398 | None:intergenic | 35.0% |
| !! | TTGATAGTGAGTAGAAGATC+AGG | + | chr8.2:7220052-7220071 | None:intergenic | 35.0% |
| !!! | CTTGAATTTGGTTTTGCAGA+TGG | - | chr8.2:7221885-7221904 | MS.gene051816:CDS | 35.0% |
| AAAAGAGGAAGAGGAGCTTA+TGG | + | chr8.2:7221177-7221196 | None:intergenic | 40.0% | |
| AAACAACCACAGCAAGATCA+AGG | - | chr8.2:7221266-7221285 | MS.gene051816:CDS | 40.0% | |
| AAATGAGAAGTTAGGCCTTG+AGG | + | chr8.2:7220590-7220609 | None:intergenic | 40.0% | |
| AAGATTGTTGAAGTAGCAGC+AGG | + | chr8.2:7220418-7220437 | None:intergenic | 40.0% | |
| AAGCTATCGTTGAGACTGAA+TGG | - | chr8.2:7220825-7220844 | MS.gene051816:intron | 40.0% | |
| AATGGAGATTGAAAGCTGAG+TGG | + | chr8.2:7221432-7221451 | None:intergenic | 40.0% | |
| AGAGAAACCATTTACCTCGT+TGG | + | chr8.2:7221496-7221515 | None:intergenic | 40.0% | |
| ATAGTGAGTAGAAGATCAGG+AGG | + | chr8.2:7220049-7220068 | None:intergenic | 40.0% | |
| CAGAAACTCATGGCTTGATT+TGG | - | chr8.2:7221391-7221410 | MS.gene051816:CDS | 40.0% | |
| GAACAGATGGAAAGAAATGG+AGG | - | chr8.2:7220278-7220297 | MS.gene051816:intron | 40.0% | |
| GATCAAGGTTGTTACATCTC+AGG | - | chr8.2:7221281-7221300 | MS.gene051816:CDS | 40.0% | |
| TAACAACCTTGATCTTGCTG+TGG | + | chr8.2:7221275-7221294 | None:intergenic | 40.0% | |
| TCGCCATAGGTGATAATTTG+AGG | - | chr8.2:7221569-7221588 | MS.gene051816:CDS | 40.0% | |
| TGACTAGAGCATGTTGACAA+TGG | + | chr8.2:7221717-7221736 | None:intergenic | 40.0% | |
| ! | AGCACCATCATGAACCTTTT+TGG | + | chr8.2:7220962-7220981 | None:intergenic | 40.0% |
| ! | ATCCTTTTACTCCAACTCAG+TGG | - | chr8.2:7219966-7219985 | MS.gene051816:intron | 40.0% |
| ! | CCCTTGTTTCTTGACAATAC+TGG | - | chr8.2:7220625-7220644 | MS.gene051816:CDS | 40.0% |
| ! | TGTTTATGGACTGAAAGAGG+AGG | - | chr8.2:7221058-7221077 | MS.gene051816:intron | 40.0% |
| ! | TTACAGTGTTGAGACTGATG+AGG | + | chr8.2:7220106-7220125 | None:intergenic | 40.0% |
| ! | TTTAGTTCCACAAACCAACG+AGG | - | chr8.2:7221479-7221498 | MS.gene051816:CDS | 40.0% |
| !! | AAGAAGAGTGTTGAGGGTAA+TGG | + | chr8.2:7220519-7220538 | None:intergenic | 40.0% |
| !! | ATGCACTTGTTGATTTGGTG+TGG | - | chr8.2:7220180-7220199 | MS.gene051816:intron | 40.0% |
| !! | GAAGCATAAGAAGAGTGTTG+AGG | + | chr8.2:7220526-7220545 | None:intergenic | 40.0% |
| !!! | CATGAGTTTCTGCTGCTTTT+GGG | + | chr8.2:7221383-7221402 | None:intergenic | 40.0% |
| AAACCGTTCAAGAAAGCCTG+TGG | - | chr8.2:7220360-7220379 | MS.gene051816:CDS | 45.0% | |
| AGAAAAATAGACCCAGAGCC+AGG | - | chr8.2:7220244-7220263 | MS.gene051816:intron | 45.0% | |
| AGAGGAAAGGGTGGTTAAGA+TGG | + | chr8.2:7220552-7220571 | None:intergenic | 45.0% | |
| CCAAAAGCAGCAGAAACTCA+TGG | - | chr8.2:7221381-7221400 | MS.gene051816:CDS | 45.0% | |
| CCACAAACCAACGAGGTAAA+TGG | - | chr8.2:7221486-7221505 | MS.gene051816:CDS | 45.0% | |
| CTTCCACAGGCTTTCTTGAA+CGG | + | chr8.2:7220366-7220385 | None:intergenic | 45.0% | |
| GAAAAATAGACCCAGAGCCA+GGG | - | chr8.2:7220245-7220264 | MS.gene051816:intron | 45.0% | |
| GAAGAGGAGCTTATGGTAAG+TGG | + | chr8.2:7221170-7221189 | None:intergenic | 45.0% | |
| GAGGAAAGGGTGGTTAAGAT+GGG | + | chr8.2:7220551-7220570 | None:intergenic | 45.0% | |
| GAGGGTTATGGTAGAGGAAA+GGG | + | chr8.2:7220564-7220583 | None:intergenic | 45.0% | |
| GAGTAGAAGATCAGGAGGAA+TGG | + | chr8.2:7220044-7220063 | None:intergenic | 45.0% | |
| GCTTTCTTCACTGAACCTTC+TGG | - | chr8.2:7221092-7221111 | MS.gene051816:intron | 45.0% | |
| TGCTTCAAAGCTATGAGCCA+CGG | + | chr8.2:7221756-7221775 | None:intergenic | 45.0% | |
| ! | GTGAAAGGCACATGCATAGA+GGG | - | chr8.2:7220335-7220354 | MS.gene051816:intron | 45.0% |
| ! | TGCCACTGAGTTGGAGTAAA+AGG | + | chr8.2:7219971-7219990 | None:intergenic | 45.0% |
| ! | TGTGAAAGGCACATGCATAG+AGG | - | chr8.2:7220334-7220353 | MS.gene051816:intron | 45.0% |
| ! | TTATGGACTGAAAGAGGAGG+TGG | - | chr8.2:7221061-7221080 | MS.gene051816:intron | 45.0% |
| !! | CCATTTACCTCGTTGGTTTG+TGG | + | chr8.2:7221489-7221508 | None:intergenic | 45.0% |
| !!! | CCATGAGTTTCTGCTGCTTT+TGG | + | chr8.2:7221384-7221403 | None:intergenic | 45.0% |
| !!! | ATAAACATTTTAATAAAAAA+AGG | + | chr8.2:7220991-7221010 | None:intergenic | 5.0% |
| AAGTTAGGCCTTGAGGATGG+AGG | + | chr8.2:7220583-7220602 | None:intergenic | 50.0% | |
| ACCATAACCCTCCATCCTCA+AGG | - | chr8.2:7220572-7220591 | MS.gene051816:CDS | 50.0% | |
| AGGATGGAGGGTTATGGTAG+AGG | + | chr8.2:7220570-7220589 | None:intergenic | 50.0% | |
| AGTTAGGCCTTGAGGATGGA+GGG | + | chr8.2:7220582-7220601 | None:intergenic | 50.0% | |
| GAGAAGTTAGGCCTTGAGGA+TGG | + | chr8.2:7220586-7220605 | None:intergenic | 50.0% | |
| GGAGATTGAAAGCTGAGTGG+TGG | + | chr8.2:7221429-7221448 | None:intergenic | 50.0% | |
| GGAGGGTTATGGTAGAGGAA+AGG | + | chr8.2:7220565-7220584 | None:intergenic | 50.0% | |
| GGTTATGGTAGAGGAAAGGG+TGG | + | chr8.2:7220561-7220580 | None:intergenic | 50.0% | |
| TCAAGCTCTTGCCACTGAGT+TGG | + | chr8.2:7219980-7219999 | None:intergenic | 50.0% | |
| ! | TTTGGTGTGGTGCATGCAGT+TGG | - | chr8.2:7220193-7220212 | MS.gene051816:intron | 50.0% |
| !!! | GAGTTTCTGCTGCTTTTGGG+TGG | + | chr8.2:7221380-7221399 | None:intergenic | 50.0% |
| AAATAGACCCAGAGCCAGGG+AGG | - | chr8.2:7220248-7220267 | MS.gene051816:intron | 55.0% | |
| CGACACTGACACATCGCCAT+AGG | - | chr8.2:7221556-7221575 | MS.gene051816:CDS | 55.0% | |
| GCCTTGAGGATGGAGGGTTA+TGG | + | chr8.2:7220576-7220595 | None:intergenic | 55.0% | |
| GCTCTAGTCAGTGTTGTGCC+TGG | - | chr8.2:7221727-7221746 | MS.gene051816:intron | 55.0% | |
| GTGTGGTGCATGCAGTTGGA+TGG | - | chr8.2:7220197-7220216 | MS.gene051816:intron | 55.0% | |
| TCTGTTCTTCTGCACCTCCC+TGG | + | chr8.2:7220265-7220284 | None:intergenic | 55.0% | |
| ! | GGGAGGTGCAGAAGAACAGA+TGG | - | chr8.2:7220265-7220284 | MS.gene051816:intron | 55.0% |
| AGCTATGAGCCACGGACACC+AGG | + | chr8.2:7221748-7221767 | None:intergenic | 60.0% | |
| AGTGTTGTGCCTGGTGTCCG+TGG | - | chr8.2:7221736-7221755 | MS.gene051816:CDS | 60.0% | |
| ! | TTCTGCACCTCCCTGGCTCT+GGG | + | chr8.2:7220258-7220277 | None:intergenic | 60.0% |
| CTTCTGCACCTCCCTGGCTC+TGG | + | chr8.2:7220259-7220278 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 7219944 | 7221911 | 7219944 | ID=MS.gene051816 |
| chr8.2 | mRNA | 7219944 | 7221911 | 7219944 | ID=MS.gene051816.t1;Parent=MS.gene051816 |
| chr8.2 | exon | 7221734 | 7221911 | 7221734 | ID=MS.gene051816.t1.exon1;Parent=MS.gene051816.t1 |
| chr8.2 | CDS | 7221734 | 7221911 | 7221734 | ID=cds.MS.gene051816.t1;Parent=MS.gene051816.t1 |
| chr8.2 | exon | 7221172 | 7221643 | 7221172 | ID=MS.gene051816.t1.exon2;Parent=MS.gene051816.t1 |
| chr8.2 | CDS | 7221172 | 7221643 | 7221172 | ID=cds.MS.gene051816.t1;Parent=MS.gene051816.t1 |
| chr8.2 | exon | 7220355 | 7220806 | 7220355 | ID=MS.gene051816.t1.exon3;Parent=MS.gene051816.t1 |
| chr8.2 | CDS | 7220355 | 7220806 | 7220355 | ID=cds.MS.gene051816.t1;Parent=MS.gene051816.t1 |
| chr8.2 | exon | 7219944 | 7219951 | 7219944 | ID=MS.gene051816.t1.exon4;Parent=MS.gene051816.t1 |
| chr8.2 | CDS | 7219944 | 7219951 | 7219944 | ID=cds.MS.gene051816.t1;Parent=MS.gene051816.t1 |
| Gene Sequence |
| Protein sequence |
