Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050206.t1 | XP_013469384.1 | 95.7 | 351 | 15 | 0 | 1 | 351 | 151 | 501 | 1.90E-180 | 641.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050206.t1 | Q9LZS0 | 36.0 | 347 | 187 | 8 | 1 | 327 | 156 | 487 | 2.7e-45 | 184.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050206.t1 | A0A072VNQ7 | 95.7 | 351 | 15 | 0 | 1 | 351 | 151 | 501 | 1.4e-180 | 641.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene050206.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050206 | MS.gene051789 | 0.804219 | 2.40E-49 | -1.69E-46 |
| MS.gene050206 | MS.gene053074 | 0.827834 | 1.26E-54 | -1.69E-46 |
| MS.gene050206 | MS.gene05456 | 0.814493 | 1.50E-51 | -1.69E-46 |
| MS.gene050206 | MS.gene059006 | 0.825887 | 3.67E-54 | -1.69E-46 |
| MS.gene050206 | MS.gene061336 | 0.801685 | 8.01E-49 | -1.69E-46 |
| MS.gene050206 | MS.gene067305 | 0.841954 | 3.47E-58 | -1.69E-46 |
| MS.gene050206 | MS.gene070594 | 0.82109 | 4.86E-53 | -1.69E-46 |
| MS.gene050206 | MS.gene070595 | 0.807644 | 4.57E-50 | -1.69E-46 |
| MS.gene050206 | MS.gene070597 | 0.800449 | 1.43E-48 | -1.69E-46 |
| MS.gene050206 | MS.gene07942 | 0.815483 | 9.03E-52 | -1.69E-46 |
| MS.gene050206 | MS.gene20359 | 0.812883 | 3.39E-51 | -1.69E-46 |
| MS.gene050206 | MS.gene22109 | 0.805951 | 1.04E-49 | -1.69E-46 |
| MS.gene050206 | MS.gene22587 | 0.83039 | 3.02E-55 | -1.69E-46 |
| MS.gene050206 | MS.gene23012 | 0.810228 | 1.28E-50 | -1.69E-46 |
| MS.gene050206 | MS.gene23849 | 0.814607 | 1.41E-51 | -1.69E-46 |
| MS.gene050206 | MS.gene35428 | 0.811258 | 7.66E-51 | -1.69E-46 |
| MS.gene050206 | MS.gene35695 | 0.809912 | 1.50E-50 | -1.69E-46 |
| MS.gene050206 | MS.gene45085 | 0.808723 | 2.69E-50 | -1.69E-46 |
| MS.gene050206 | MS.gene60557 | 0.822284 | 2.57E-53 | -1.69E-46 |
| MS.gene050206 | MS.gene75321 | 0.815393 | 9.46E-52 | -1.69E-46 |
| MS.gene050206 | MS.gene80842 | 0.806859 | 6.70E-50 | -1.69E-46 |
| MS.gene050206 | MS.gene82214 | 0.806344 | 8.61E-50 | -1.69E-46 |
| MS.gene050206 | MS.gene82571 | 0.808131 | 3.60E-50 | -1.69E-46 |
| MS.gene050206 | MS.gene82810 | 0.814352 | 1.61E-51 | -1.69E-46 |
| MS.gene050206 | MS.gene84726 | 0.827898 | 1.21E-54 | -1.69E-46 |
| MS.gene050206 | MS.gene84833 | 0.842258 | 2.89E-58 | -1.69E-46 |
| MS.gene050206 | MS.gene89207 | 0.804265 | 2.35E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050206.t1 | MTR_1g492790 | 99.145 | 351 | 3 | 0 | 1 | 351 | 151 | 501 | 0.0 | 728 |
| MS.gene050206.t1 | MTR_1g060990 | 41.129 | 248 | 113 | 9 | 1 | 248 | 168 | 382 | 2.43e-48 | 170 |
| MS.gene050206.t1 | MTR_1g098900 | 30.827 | 266 | 138 | 9 | 4 | 229 | 96 | 355 | 3.89e-26 | 109 |
| MS.gene050206.t1 | MTR_1g098870 | 25.348 | 359 | 205 | 12 | 4 | 322 | 94 | 429 | 4.91e-23 | 100 |
| MS.gene050206.t1 | MTR_6g035370 | 61.538 | 52 | 20 | 0 | 4 | 55 | 94 | 145 | 2.66e-15 | 77.4 |
| MS.gene050206.t1 | MTR_2g026725 | 27.193 | 228 | 116 | 8 | 153 | 338 | 114 | 333 | 2.35e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050206.t1 | AT5G03680 | 38.418 | 354 | 169 | 9 | 1 | 327 | 156 | 487 | 2.41e-62 | 209 |
| MS.gene050206.t1 | AT3G10000 | 38.306 | 248 | 132 | 7 | 1 | 245 | 125 | 354 | 3.04e-40 | 148 |
| MS.gene050206.t1 | AT3G10000 | 37.500 | 240 | 129 | 7 | 9 | 245 | 123 | 344 | 1.93e-36 | 137 |
| MS.gene050206.t1 | AT1G76890 | 28.676 | 408 | 199 | 12 | 4 | 338 | 80 | 468 | 2.87e-32 | 127 |
| MS.gene050206.t1 | AT1G76880 | 58.929 | 56 | 23 | 0 | 4 | 59 | 100 | 155 | 2.72e-14 | 74.3 |
Find 66 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGGCTCTTACTCTTATT+TGG | 0.155961 | 1.1:+67161633 | None:intergenic |
| TTGTTGTATCATTTGCTTCT+TGG | 0.177243 | 1.1:+67161616 | None:intergenic |
| TGCATTTCTTTCCACTTCTT+TGG | 0.203428 | 1.1:+67162324 | None:intergenic |
| AGGATAATGGCTGAGGAATT+TGG | 0.204963 | 1.1:-67162350 | None:intergenic |
| GAACATCAAGTAAGAGAAAA+AGG | 0.239292 | 1.1:-67161504 | MS.gene050206:CDS |
| AGGTGAAAGGATGGTTTATA+TGG | 0.259177 | 1.1:-67161451 | MS.gene050206:CDS |
| GATATTTGGATGATGGAGTT+TGG | 0.262012 | 1.1:-67161482 | MS.gene050206:CDS |
| AAACACAAGGCCTTGGTGTT+TGG | 0.270837 | 1.1:-67161343 | MS.gene050206:CDS |
| GAGCTGAGTGCAAGAAAATA+TGG | 0.284773 | 1.1:-67161413 | MS.gene050206:CDS |
| AACACAAGGCCTTGGTGTTT+GGG | 0.305639 | 1.1:-67161342 | MS.gene050206:CDS |
| TCTACTAGCTTTACCTTCCT+TGG | 0.314459 | 1.1:+67162262 | None:intergenic |
| TGGTTTATATGGGATTTAAT+AGG | 0.331668 | 1.1:-67161440 | MS.gene050206:CDS |
| ATCAAGAAATACATGAACTT+TGG | 0.336932 | 1.1:-67161740 | MS.gene050206:CDS |
| GGATAATGGCTGAGGAATTT+GGG | 0.344397 | 1.1:-67162349 | None:intergenic |
| ATATTTGGATGATGGAGTTT+GGG | 0.376772 | 1.1:-67161481 | MS.gene050206:CDS |
| GATGGAGTTTGGGATGAAAT+AGG | 0.383462 | 1.1:-67161471 | MS.gene050206:CDS |
| TCAAGAAATACATGAACTTT+GGG | 0.384682 | 1.1:-67161739 | MS.gene050206:CDS |
| GTAGCAACAAAGGAAGCATT+AGG | 0.385971 | 1.1:+67162143 | None:intergenic |
| GAAGTTGTAAGAAAACATAT+TGG | 0.406391 | 1.1:-67161672 | MS.gene050206:CDS |
| AAGTTGTAAGAAAACATATT+GGG | 0.418479 | 1.1:-67161671 | MS.gene050206:CDS |
| TAGCAACAAAGGAAGCATTA+GGG | 0.434533 | 1.1:+67162144 | None:intergenic |
| GAGGCATGAGAGTTTGTGTT+TGG | 0.435521 | 1.1:+67162185 | None:intergenic |
| AGAAAGGGCAAAGTGGTCAT+AGG | 0.438060 | 1.1:-67161938 | MS.gene050206:CDS |
| ATATTAGTATGTCTCTTAGA+AGG | 0.438578 | 1.1:-67161386 | MS.gene050206:CDS |
| TATATGGGATTTAATAGGAA+TGG | 0.452119 | 1.1:-67161435 | MS.gene050206:CDS |
| ATATTATCCACACTTTCAAA+AGG | 0.458934 | 1.1:+67161582 | None:intergenic |
| TATTCATAGATGGACAGAAA+TGG | 0.466542 | 1.1:-67161562 | MS.gene050206:CDS |
| AGAACAAGAGATGGCATCAA+AGG | 0.471241 | 1.1:-67161799 | MS.gene050206:CDS |
| TTTCAAACTTGATACAACTA+AGG | 0.475487 | 1.1:-67161536 | MS.gene050206:CDS |
| ATTAACCAAGAAAATACTAA+TGG | 0.483532 | 1.1:-67162101 | MS.gene050206:CDS |
| TTATTGAGACTCAAGATGCT+TGG | 0.485535 | 1.1:-67161854 | MS.gene050206:CDS |
| ATGAAGTCGTCGAAGGAGAA+AGG | 0.490837 | 1.1:-67161954 | MS.gene050206:CDS |
| GGTGAAAGGATGGTTTATAT+GGG | 0.497182 | 1.1:-67161450 | MS.gene050206:CDS |
| GGATGAAATAGGTGAAAGGA+TGG | 0.499715 | 1.1:-67161460 | MS.gene050206:CDS |
| GTGTGGATAATATTCATAGA+TGG | 0.500320 | 1.1:-67161572 | MS.gene050206:CDS |
| CTTGTTTAGGATAATGGCTG+AGG | 0.502416 | 1.1:-67162357 | None:intergenic |
| ATAGGAGGGCAAGGAAAAGT+TGG | 0.504848 | 1.1:-67161920 | MS.gene050206:CDS |
| TATTATCCACACTTTCAAAA+GGG | 0.515340 | 1.1:+67161583 | None:intergenic |
| TGAGACTCAAGATGCTTGGA+TGG | 0.522893 | 1.1:-67161850 | MS.gene050206:CDS |
| AGACAGCTTGAAGCAATATG+TGG | 0.533898 | 1.1:-67162212 | MS.gene050206:CDS |
| TGAAGTCGTCGAAGGAGAAA+GGG | 0.536001 | 1.1:-67161953 | MS.gene050206:CDS |
| TGGCATCAAAGGAAGAAGAA+AGG | 0.537348 | 1.1:-67161788 | MS.gene050206:CDS |
| TTAGACTTTGTGAATACTTG+TGG | 0.538073 | 1.1:+67162054 | None:intergenic |
| GGAAGAGAAAAGAGTCAATG+AGG | 0.550829 | 1.1:-67161767 | MS.gene050206:CDS |
| TTGAGTTTGAGTAGCAACAA+AGG | 0.562015 | 1.1:+67162133 | None:intergenic |
| AAGGGCAAAGTGGTCATAGG+AGG | 0.562963 | 1.1:-67161935 | MS.gene050206:CDS |
| GGTAAAGCTAGTAGACAAGA+TGG | 0.568681 | 1.1:-67162254 | MS.gene050206:CDS |
| GAATTTGGGTACCAAAGAAG+TGG | 0.582190 | 1.1:-67162335 | MS.gene050206:CDS |
| AGGGCAAGGAAAAGTTGGAG+AGG | 0.591096 | 1.1:-67161915 | MS.gene050206:CDS |
| AGCTGAGTGCAAGAAAATAT+GGG | 0.595363 | 1.1:-67161412 | MS.gene050206:CDS |
| TTTGGGATGAAATAGGTGAA+AGG | 0.600563 | 1.1:-67161464 | MS.gene050206:CDS |
| TATTACAAGAAGACCAAGGA+AGG | 0.601931 | 1.1:-67162275 | MS.gene050206:CDS |
| AAGTTGGAGAGGTAAAGTTG+AGG | 0.607935 | 1.1:-67161904 | MS.gene050206:CDS |
| AAAGTGGTCATAGGAGGGCA+AGG | 0.623960 | 1.1:-67161929 | MS.gene050206:CDS |
| TGAACAAAGAGAACAAGAGA+TGG | 0.625612 | 1.1:-67161808 | MS.gene050206:CDS |
| AGCAACAAAGGAAGCATTAG+GGG | 0.629023 | 1.1:+67162145 | None:intergenic |
| CTTAGAAGGACAGTGGACTG+TGG | 0.637596 | 1.1:-67161372 | MS.gene050206:CDS |
| AAGAAGTGGAAAGAAATGCA+AGG | 0.641850 | 1.1:-67162321 | MS.gene050206:CDS |
| AGGGCAAAGTGGTCATAGGA+GGG | 0.643035 | 1.1:-67161934 | MS.gene050206:CDS |
| ACACACTATGAAGTCGTCGA+AGG | 0.660577 | 1.1:-67161961 | MS.gene050206:CDS |
| TATGTCTCTTAGAAGGACAG+TGG | 0.662720 | 1.1:-67161379 | MS.gene050206:CDS |
| CTCATCTGAAAACAACGATG+AGG | 0.668787 | 1.1:-67162000 | MS.gene050206:CDS |
| AGCTTAAGTCCCAAACACCA+AGG | 0.671681 | 1.1:+67161333 | None:intergenic |
| AACTTGATACAACTAAGGAG+TGG | 0.671997 | 1.1:-67161531 | MS.gene050206:CDS |
| TCGAAGGAGAAAGGGCAAAG+TGG | 0.682624 | 1.1:-67161945 | MS.gene050206:CDS |
| CAAGTATTACAAGAAGACCA+AGG | 0.709647 | 1.1:-67162279 | MS.gene050206:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTGTAAGAAAACATATT+GGG | - | chr1.1:67161984-67162003 | MS.gene050206:CDS | 20.0% |
| !! | ATTAACCAAGAAAATACTAA+TGG | - | chr1.1:67161554-67161573 | MS.gene050206:CDS | 20.0% |
| ! | AGTAAGAGAAAAAGGATATT+TGG | - | chr1.1:67162159-67162178 | MS.gene050206:CDS | 25.0% |
| ! | ATATTAGTATGTCTCTTAGA+AGG | - | chr1.1:67162269-67162288 | MS.gene050206:CDS | 25.0% |
| ! | ATATTATCCACACTTTCAAA+AGG | + | chr1.1:67162076-67162095 | None:intergenic | 25.0% |
| ! | ATCAAGAAATACATGAACTT+TGG | - | chr1.1:67161915-67161934 | MS.gene050206:CDS | 25.0% |
| ! | GAAGTTGTAAGAAAACATAT+TGG | - | chr1.1:67161983-67162002 | MS.gene050206:CDS | 25.0% |
| ! | TATATGGGATTTAATAGGAA+TGG | - | chr1.1:67162220-67162239 | MS.gene050206:CDS | 25.0% |
| ! | TATTATCCACACTTTCAAAA+GGG | + | chr1.1:67162075-67162094 | None:intergenic | 25.0% |
| ! | TCAAGAAATACATGAACTTT+GGG | - | chr1.1:67161916-67161935 | MS.gene050206:CDS | 25.0% |
| ! | TGGTTTATATGGGATTTAAT+AGG | - | chr1.1:67162215-67162234 | MS.gene050206:CDS | 25.0% |
| ! | TTTCAAACTTGATACAACTA+AGG | - | chr1.1:67162119-67162138 | MS.gene050206:CDS | 25.0% |
| !! | ATTTTCTTGGTTAATTGTGA+AGG | + | chr1.1:67161549-67161568 | None:intergenic | 25.0% |
| GAAAAAGGATATTTGGATGA+TGG | - | chr1.1:67162166-67162185 | MS.gene050206:CDS | 30.0% | |
| GAACATCAAGTAAGAGAAAA+AGG | - | chr1.1:67162151-67162170 | MS.gene050206:CDS | 30.0% | |
| GTGTGGATAATATTCATAGA+TGG | - | chr1.1:67162083-67162102 | MS.gene050206:CDS | 30.0% | |
| TATTCATAGATGGACAGAAA+TGG | - | chr1.1:67162093-67162112 | MS.gene050206:CDS | 30.0% | |
| TTAGACTTTGTGAATACTTG+TGG | + | chr1.1:67161604-67161623 | None:intergenic | 30.0% | |
| TTGTTGTATCATTTGCTTCT+TGG | + | chr1.1:67162042-67162061 | None:intergenic | 30.0% | |
| ! | CAACACCATTAGTATTTTCT+TGG | + | chr1.1:67161562-67161581 | None:intergenic | 30.0% |
| !! | ATATTTGGATGATGGAGTTT+GGG | - | chr1.1:67162174-67162193 | MS.gene050206:CDS | 30.0% |
| !! | GGTAATTTTGTCTAAAGTTG+AGG | + | chr1.1:67161492-67161511 | None:intergenic | 30.0% |
| AACTTGATACAACTAAGGAG+TGG | - | chr1.1:67162124-67162143 | MS.gene050206:CDS | 35.0% | |
| AAGAAGTGGAAAGAAATGCA+AGG | - | chr1.1:67161334-67161353 | MS.gene050206:CDS | 35.0% | |
| AGCTGAGTGCAAGAAAATAT+GGG | - | chr1.1:67162243-67162262 | MS.gene050206:CDS | 35.0% | |
| AGGTGAAAGGATGGTTTATA+TGG | - | chr1.1:67162204-67162223 | MS.gene050206:CDS | 35.0% | |
| CAAGTATTACAAGAAGACCA+AGG | - | chr1.1:67161376-67161395 | MS.gene050206:CDS | 35.0% | |
| GGTGAAAGGATGGTTTATAT+GGG | - | chr1.1:67162205-67162224 | MS.gene050206:CDS | 35.0% | |
| TATTACAAGAAGACCAAGGA+AGG | - | chr1.1:67161380-67161399 | MS.gene050206:CDS | 35.0% | |
| TGAACAAAGAGAACAAGAGA+TGG | - | chr1.1:67161847-67161866 | MS.gene050206:CDS | 35.0% | |
| TGCATTTCTTTCCACTTCTT+TGG | + | chr1.1:67161334-67161353 | None:intergenic | 35.0% | |
| TTATTGAGACTCAAGATGCT+TGG | - | chr1.1:67161801-67161820 | MS.gene050206:CDS | 35.0% | |
| TTGAGTTTGAGTAGCAACAA+AGG | + | chr1.1:67161525-67161544 | None:intergenic | 35.0% | |
| TTTGGGCTAAAGAAAAAGCA+TGG | - | chr1.1:67161933-67161952 | MS.gene050206:CDS | 35.0% | |
| ! | TCTTGGCTCTTACTCTTATT+TGG | + | chr1.1:67162025-67162044 | None:intergenic | 35.0% |
| ! | TTGGGCTAAAGAAAAAGCAT+GGG | - | chr1.1:67161934-67161953 | MS.gene050206:CDS | 35.0% |
| ! | TTTGGGATGAAATAGGTGAA+AGG | - | chr1.1:67162191-67162210 | MS.gene050206:CDS | 35.0% |
| !! | GATATTTGGATGATGGAGTT+TGG | - | chr1.1:67162173-67162192 | MS.gene050206:CDS | 35.0% |
| !! | TAGCAACAAAGGAAGCATTA+GGG | + | chr1.1:67161514-67161533 | None:intergenic | 35.0% |
| !! | TGAATACCCTTTTGAAAGTG+TGG | - | chr1.1:67162066-67162085 | MS.gene050206:CDS | 35.0% |
| AAGTTGGAGAGGTAAAGTTG+AGG | - | chr1.1:67161751-67161770 | MS.gene050206:CDS | 40.0% | |
| ACTGTGGAGTCAAAAACACA+AGG | - | chr1.1:67162299-67162318 | MS.gene050206:CDS | 40.0% | |
| AGAACAAGAGATGGCATCAA+AGG | - | chr1.1:67161856-67161875 | MS.gene050206:CDS | 40.0% | |
| AGACAGCTTGAAGCAATATG+TGG | - | chr1.1:67161443-67161462 | MS.gene050206:CDS | 40.0% | |
| CTCATCTGAAAACAACGATG+AGG | - | chr1.1:67161655-67161674 | MS.gene050206:CDS | 40.0% | |
| GAATTTGGGTACCAAAGAAG+TGG | - | chr1.1:67161320-67161339 | MS.gene050206:CDS | 40.0% | |
| GAGCTGAGTGCAAGAAAATA+TGG | - | chr1.1:67162242-67162261 | MS.gene050206:CDS | 40.0% | |
| GGAAGAGAAAAGAGTCAATG+AGG | - | chr1.1:67161888-67161907 | MS.gene050206:CDS | 40.0% | |
| GGATGAAATAGGTGAAAGGA+TGG | - | chr1.1:67162195-67162214 | MS.gene050206:CDS | 40.0% | |
| GGTAAAGCTAGTAGACAAGA+TGG | - | chr1.1:67161401-67161420 | MS.gene050206:CDS | 40.0% | |
| TATGTCTCTTAGAAGGACAG+TGG | - | chr1.1:67162276-67162295 | MS.gene050206:CDS | 40.0% | |
| TGGCATCAAAGGAAGAAGAA+AGG | - | chr1.1:67161867-67161886 | MS.gene050206:CDS | 40.0% | |
| ! | GATGGAGTTTGGGATGAAAT+AGG | - | chr1.1:67162184-67162203 | MS.gene050206:CDS | 40.0% |
| !! | AGCAACAAAGGAAGCATTAG+GGG | + | chr1.1:67161513-67161532 | None:intergenic | 40.0% |
| !! | CTCATCGTTGTTTTCAGATG+AGG | + | chr1.1:67161657-67161676 | None:intergenic | 40.0% |
| !! | GTAGCAACAAAGGAAGCATT+AGG | + | chr1.1:67161515-67161534 | None:intergenic | 40.0% |
| !! | TCTACTAGCTTTACCTTCCT+TGG | + | chr1.1:67161396-67161415 | None:intergenic | 40.0% |
| ACACACTATGAAGTCGTCGA+AGG | - | chr1.1:67161694-67161713 | MS.gene050206:CDS | 45.0% | |
| AGAAAGGGCAAAGTGGTCAT+AGG | - | chr1.1:67161717-67161736 | MS.gene050206:CDS | 45.0% | |
| AGCTTAAGTCCCAAACACCA+AGG | + | chr1.1:67162325-67162344 | None:intergenic | 45.0% | |
| ATAGGAGGGCAAGGAAAAGT+TGG | - | chr1.1:67161735-67161754 | MS.gene050206:CDS | 45.0% | |
| ATGAAGTCGTCGAAGGAGAA+AGG | - | chr1.1:67161701-67161720 | MS.gene050206:CDS | 45.0% | |
| GAGGCATGAGAGTTTGTGTT+TGG | + | chr1.1:67161473-67161492 | None:intergenic | 45.0% | |
| GAGTCAAAAACACAAGGCCT+TGG | - | chr1.1:67162305-67162324 | MS.gene050206:CDS | 45.0% | |
| TGAAGTCGTCGAAGGAGAAA+GGG | - | chr1.1:67161702-67161721 | MS.gene050206:CDS | 45.0% | |
| TGAGACTCAAGATGCTTGGA+TGG | - | chr1.1:67161805-67161824 | MS.gene050206:CDS | 45.0% | |
| !! | AAACACAAGGCCTTGGTGTT+TGG | - | chr1.1:67162312-67162331 | MS.gene050206:CDS | 45.0% |
| !! | AACACAAGGCCTTGGTGTTT+GGG | - | chr1.1:67162313-67162332 | MS.gene050206:CDS | 45.0% |
| AAAGTGGTCATAGGAGGGCA+AGG | - | chr1.1:67161726-67161745 | MS.gene050206:CDS | 50.0% | |
| AAGGGCAAAGTGGTCATAGG+AGG | - | chr1.1:67161720-67161739 | MS.gene050206:CDS | 50.0% | |
| AGGGCAAAGTGGTCATAGGA+GGG | - | chr1.1:67161721-67161740 | MS.gene050206:CDS | 50.0% | |
| AGGGCAAGGAAAAGTTGGAG+AGG | - | chr1.1:67161740-67161759 | MS.gene050206:CDS | 50.0% | |
| TCGAAGGAGAAAGGGCAAAG+TGG | - | chr1.1:67161710-67161729 | MS.gene050206:CDS | 50.0% | |
| !! | CTTAGAAGGACAGTGGACTG+TGG | - | chr1.1:67162283-67162302 | MS.gene050206:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 67161311 | 67162366 | 67161311 | ID=MS.gene050206 |
| chr1.1 | mRNA | 67161311 | 67162366 | 67161311 | ID=MS.gene050206.t1;Parent=MS.gene050206 |
| chr1.1 | exon | 67161311 | 67162366 | 67161311 | ID=MS.gene050206.t1.exon1;Parent=MS.gene050206.t1 |
| chr1.1 | CDS | 67161311 | 67162366 | 67161311 | ID=cds.MS.gene050206.t1;Parent=MS.gene050206.t1 |
| Gene Sequence |
| Protein sequence |
