Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21486.t1 | XP_003611447.1 | 97.6 | 289 | 7 | 0 | 1 | 289 | 1 | 289 | 5.90E-159 | 570.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21486.t1 | Q9C5W7 | 62.2 | 288 | 101 | 3 | 2 | 289 | 1 | 280 | 4.5e-99 | 362.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21486.t1 | G7JZV0 | 97.6 | 289 | 7 | 0 | 1 | 289 | 1 | 289 | 4.3e-159 | 570.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene21486 | 0.830722 | 2.50E-55 | -1.69E-46 |
| MS.gene049382 | MS.gene21486 | 0.801757 | 7.75E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene21486 | 0.819478 | 1.14E-52 | -1.69E-46 |
| MS.gene049808 | MS.gene21486 | 0.818983 | 1.47E-52 | -1.69E-46 |
| MS.gene051243 | MS.gene21486 | 0.837465 | 5.12E-57 | -1.69E-46 |
| MS.gene051328 | MS.gene21486 | 0.818794 | 1.63E-52 | -1.69E-46 |
| MS.gene052426 | MS.gene21486 | 0.809558 | 1.78E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene21486 | 0.802376 | 5.78E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene21486 | 0.817241 | 3.65E-52 | -1.69E-46 |
| MS.gene053216 | MS.gene21486 | 0.831796 | 1.36E-55 | -1.69E-46 |
| MS.gene05510 | MS.gene21486 | 0.810358 | 1.20E-50 | -1.69E-46 |
| MS.gene058054 | MS.gene21486 | 0.815665 | 8.23E-52 | -1.69E-46 |
| MS.gene058055 | MS.gene21486 | 0.811183 | 7.95E-51 | -1.69E-46 |
| MS.gene058399 | MS.gene21486 | 0.813732 | 2.20E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene21486 | 0.809417 | 1.91E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene21486 | 0.809931 | 1.48E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene21486 | 0.80539 | 1.37E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene21486 | 0.82793 | 1.19E-54 | -1.69E-46 |
| MS.gene060683 | MS.gene21486 | 0.805978 | 1.03E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene21486 | 0.804241 | 2.37E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene21486 | 0.814113 | 1.82E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene21486 | 0.802824 | 4.67E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene21486 | 0.813225 | 2.85E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21486.t1 | MTR_5g014080 | 97.578 | 289 | 7 | 0 | 1 | 289 | 1 | 289 | 0.0 | 583 |
| MS.gene21486.t1 | MTR_4g098860 | 77.778 | 288 | 56 | 2 | 2 | 289 | 1 | 280 | 1.61e-158 | 442 |
| MS.gene21486.t1 | MTR_1g069185 | 38.023 | 263 | 135 | 7 | 3 | 261 | 5 | 243 | 4.60e-51 | 168 |
| MS.gene21486.t1 | MTR_4g022920 | 35.398 | 226 | 117 | 4 | 5 | 230 | 4 | 200 | 9.97e-30 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21486.t1 | AT1G32400 | 66.084 | 286 | 89 | 3 | 4 | 289 | 3 | 280 | 4.74e-122 | 350 |
| MS.gene21486.t1 | AT1G32400 | 66.084 | 286 | 89 | 3 | 4 | 289 | 3 | 280 | 4.74e-122 | 350 |
| MS.gene21486.t1 | AT1G32400 | 66.084 | 286 | 89 | 3 | 4 | 289 | 3 | 280 | 4.74e-122 | 350 |
| MS.gene21486.t1 | AT2G20230 | 33.457 | 269 | 158 | 6 | 3 | 260 | 5 | 263 | 4.59e-38 | 135 |
| MS.gene21486.t1 | AT4G28770 | 38.172 | 186 | 102 | 4 | 84 | 267 | 106 | 280 | 5.34e-34 | 125 |
| MS.gene21486.t1 | AT4G28770 | 38.172 | 186 | 102 | 4 | 84 | 267 | 150 | 324 | 8.88e-34 | 125 |
| MS.gene21486.t1 | AT2G20740 | 29.572 | 257 | 126 | 7 | 5 | 253 | 6 | 215 | 3.12e-30 | 114 |
| MS.gene21486.t1 | AT2G20740 | 36.158 | 177 | 91 | 5 | 85 | 253 | 12 | 174 | 3.30e-30 | 112 |
| MS.gene21486.t1 | AT2G20740 | 31.111 | 135 | 71 | 5 | 125 | 251 | 3 | 123 | 1.40e-13 | 67.0 |
Find 79 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCATTGTTTCTTGTTT+TGG | 0.129815 | 5.3:+7201799 | MS.gene21486:CDS |
| CTCCATGCATCATTTCTATT+TGG | 0.183792 | 5.3:-7204717 | None:intergenic |
| TCTTGTTAGCCCTTATTGTT+AGG | 0.196919 | 5.3:+7204556 | MS.gene21486:CDS |
| GGTTTGGCTATTGTGGGTTA+TGG | 0.213085 | 5.3:+7200591 | MS.gene21486:CDS |
| ATATGGGCGGCCGTTGCTTT+TGG | 0.273803 | 5.3:+7200719 | MS.gene21486:CDS |
| GTTTGGCTATTGTGGGTTAT+GGG | 0.276554 | 5.3:+7200592 | MS.gene21486:CDS |
| AGGTTTATTTACTTATTTAT+TGG | 0.292003 | 5.3:+7201763 | MS.gene21486:intron |
| TATTTACAGCCCTAACAATA+AGG | 0.297511 | 5.3:-7204566 | None:intergenic |
| GATAGTGCTCTAATTCAATA+TGG | 0.300358 | 5.3:+7200702 | MS.gene21486:CDS |
| TTGGCTGTGAGTTTGCTTGC+TGG | 0.304573 | 5.3:-7206075 | None:intergenic |
| TCCATGCATCATTTCTATTT+GGG | 0.305941 | 5.3:-7204716 | None:intergenic |
| TGGTGTGTTGTAGAGGCTTC+TGG | 0.307436 | 5.3:+7200526 | MS.gene21486:CDS |
| TTCTATTCTTTGACAAAAGC+TGG | 0.318785 | 5.3:+7202099 | MS.gene21486:CDS |
| GGCTGCCGAACTTGCTGCCT+TGG | 0.360568 | 5.3:-7204627 | None:intergenic |
| ATGGGTTTCTCAGAGAGAAT+TGG | 0.363148 | 5.3:+7202256 | MS.gene21486:CDS |
| TTATTGTTAGGGCTGTAAAT+AGG | 0.366779 | 5.3:+7204568 | MS.gene21486:CDS |
| TCTTGGGATTGTCATCTTTG+AGG | 0.385647 | 5.3:+7202299 | MS.gene21486:CDS |
| CTTGTTAGCCCTTATTGTTA+GGG | 0.391844 | 5.3:+7204557 | MS.gene21486:CDS |
| GAAATTCCAACAGATAAAAC+TGG | 0.392680 | 5.3:+7202216 | MS.gene21486:CDS |
| GGGTTATGGGATCTATTTGC+TGG | 0.393501 | 5.3:+7200605 | MS.gene21486:CDS |
| CATATTGACCGTGACTGGTT+TGG | 0.400411 | 5.3:+7200575 | MS.gene21486:CDS |
| CCATCAGGGTTACCAGTTGC+TGG | 0.403929 | 5.3:+7204678 | MS.gene21486:CDS |
| ACTGTTGATCTTGGTAGAGC+TGG | 0.404760 | 5.3:+7202064 | MS.gene21486:CDS |
| TGGTCCGTTGTCCCAGCAAC+TGG | 0.408522 | 5.3:-7204690 | None:intergenic |
| AACTTCATATTGACCGTGAC+TGG | 0.415431 | 5.3:+7200570 | MS.gene21486:CDS |
| TGGGTTTCTCAGAGAGAATT+GGG | 0.419683 | 5.3:+7202257 | MS.gene21486:CDS |
| AGACAAGCAGGTCCACCATC+AGG | 0.420726 | 5.3:+7204663 | MS.gene21486:CDS |
| TTGCTGGAACCTTTGCGATT+CGG | 0.422085 | 5.3:-7206059 | None:intergenic |
| ATTGTGAGATGGGTTGCTCT+TGG | 0.423628 | 5.3:+7202282 | MS.gene21486:CDS |
| TTGTGAGATGGGTTGCTCTT+GGG | 0.426805 | 5.3:+7202283 | MS.gene21486:CDS |
| CGTGACTGGTTTGGCTATTG+TGG | 0.428490 | 5.3:+7200584 | MS.gene21486:CDS |
| TTAATCCAAGGCAGCAAGTT+CGG | 0.433091 | 5.3:+7204622 | MS.gene21486:CDS |
| TTTAGTGGCACTGTTGATCT+TGG | 0.436265 | 5.3:+7202055 | MS.gene21486:CDS |
| CATCATTTCTATTTGGGCGC+TGG | 0.458958 | 5.3:-7204710 | None:intergenic |
| GGTGTGTTGTAGAGGCTTCT+GGG | 0.459724 | 5.3:+7200527 | MS.gene21486:CDS |
| CCGCTGACCGGAGAAATATC+TGG | 0.468496 | 5.3:-7200678 | None:intergenic |
| GTGACTGGTTTGGCTATTGT+GGG | 0.470771 | 5.3:+7200585 | MS.gene21486:CDS |
| TTGACAAATTGCCTAAGGCT+TGG | 0.479937 | 5.3:+7200766 | MS.gene21486:CDS |
| ATTTACTTATTTATTGGTGT+CGG | 0.480194 | 5.3:+7201769 | MS.gene21486:CDS |
| TGAAGTTTAAAAGCTTCAAA+AGG | 0.481784 | 5.3:-7200554 | None:intergenic |
| TGGAACCTTTGCGATTCGGA+TGG | 0.484280 | 5.3:-7206055 | None:intergenic |
| AGAAAGATGGTGTGTTGTAG+AGG | 0.492994 | 5.3:+7200519 | None:intergenic |
| TTGATAAGGATACACAAATC+AGG | 0.493243 | 5.3:-7201855 | None:intergenic |
| GAATTGGGATATTGTGAGAT+GGG | 0.497392 | 5.3:+7202272 | MS.gene21486:CDS |
| AGAATTGGGATATTGTGAGA+TGG | 0.498426 | 5.3:+7202271 | MS.gene21486:CDS |
| ATTTACAGCCCTAACAATAA+GGG | 0.500669 | 5.3:-7204565 | None:intergenic |
| ATCTGGCGTTGGAGAAATGT+CGG | 0.508214 | 5.3:-7200661 | None:intergenic |
| ATGCATGGAGTACACGGATG+AGG | 0.508700 | 5.3:+7204730 | MS.gene21486:CDS |
| ATAGTGCTCTAATTCAATAT+GGG | 0.515139 | 5.3:+7200703 | MS.gene21486:CDS |
| TTTATCGTCATCAGAAGTCT+TGG | 0.522604 | 5.3:-7200637 | None:intergenic |
| TCCAACGCCAGATATTTCTC+CGG | 0.526278 | 5.3:+7200671 | MS.gene21486:CDS |
| TCTGGCGTTGGAGAAATGTC+GGG | 0.528483 | 5.3:-7200660 | None:intergenic |
| CATCAGGGTTACCAGTTGCT+GGG | 0.538957 | 5.3:+7204679 | MS.gene21486:CDS |
| TTGCTCAATAATAGACAAGC+AGG | 0.539753 | 5.3:+7204651 | MS.gene21486:CDS |
| CTGTTGATCTTGGTAGAGCT+GGG | 0.542791 | 5.3:+7202065 | MS.gene21486:CDS |
| ACCGGAGAAATATCTGGCGT+TGG | 0.558113 | 5.3:-7200672 | None:intergenic |
| GGAACCTTTGCGATTCGGAT+GGG | 0.559366 | 5.3:-7206054 | None:intergenic |
| TCATCACTATCGTAATCTGC+TGG | 0.565871 | 5.3:-7204591 | None:intergenic |
| GTTACCAGTTGCTGGGACAA+CGG | 0.574204 | 5.3:+7204686 | MS.gene21486:CDS |
| ATTGGAGCTACGACACGGAA+TGG | 0.578523 | 5.3:+7201826 | MS.gene21486:CDS |
| CACAATAGCCAAACCAGTCA+CGG | 0.584267 | 5.3:-7200583 | None:intergenic |
| GCTTGTCTATTATTGAGCAA+TGG | 0.590849 | 5.3:-7204648 | None:intergenic |
| ATGATGAGCTTATTAATCCA+AGG | 0.592571 | 5.3:+7204610 | MS.gene21486:CDS |
| AAGCAAGCATACCAAGCCTT+AGG | 0.594368 | 5.3:-7200777 | None:intergenic |
| GAGTACACGGATGAGGGAGA+AGG | 0.602719 | 5.3:+7204737 | MS.gene21486:CDS |
| TGCATGGAGTACACGGATGA+GGG | 0.603602 | 5.3:+7204731 | MS.gene21486:CDS |
| GACAAGCAGGTCCACCATCA+GGG | 0.606528 | 5.3:+7204664 | MS.gene21486:CDS |
| AGAGCACTATCACCGCTGAC+CGG | 0.609186 | 5.3:-7200690 | None:intergenic |
| GAAATGATGCATGGAGTACA+CGG | 0.615934 | 5.3:+7204724 | MS.gene21486:CDS |
| AGAGACACAGCCAAAAGCAA+CGG | 0.631997 | 5.3:-7200729 | None:intergenic |
| ACAACCCATCCGAATCGCAA+AGG | 0.644593 | 5.3:+7206050 | MS.gene21486:CDS |
| GCAACTGGTAACCCTGATGG+TGG | 0.644952 | 5.3:-7204675 | None:intergenic |
| GTGCTCTAATTCAATATGGG+CGG | 0.646729 | 5.3:+7200706 | MS.gene21486:CDS |
| GAGATTACATGATGGTGCAG+CGG | 0.647361 | 5.3:-7206111 | None:intergenic |
| GTTGTATTGGAGCTACGACA+CGG | 0.649188 | 5.3:+7201821 | MS.gene21486:CDS |
| CCAGCAACTGGTAACCCTGA+TGG | 0.655467 | 5.3:-7204678 | None:intergenic |
| CCAGATATTTCTCCGGTCAG+CGG | 0.660823 | 5.3:+7200678 | MS.gene21486:CDS |
| GCCCAAATAGAAATGATGCA+TGG | 0.669694 | 5.3:+7204715 | MS.gene21486:CDS |
| GACATGAAGAGATTACATGA+TGG | 0.674922 | 5.3:-7206119 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATTATTAACCAAAA+TGG | - | chr5.3:7203952-7203971 | None:intergenic | 10.0% |
| !! | AAAAACATTACATAAAATTC+CGG | - | chr5.3:7205743-7205762 | None:intergenic | 15.0% |
| !! | AGGTTTATTTACTTATTTAT+TGG | + | chr5.3:7201763-7201782 | MS.gene21486:intron | 15.0% |
| !! | TATTGTTAACTTAATAACTA+TGG | - | chr5.3:7201021-7201040 | None:intergenic | 15.0% |
| !! | TTATTTGTTTAAATAGCATA+CGG | - | chr5.3:7202480-7202499 | None:intergenic | 15.0% |
| !!! | ATACATCTATAGTTTTTTAA+AGG | + | chr5.3:7205320-7205339 | MS.gene21486:intron | 15.0% |
| !!! | TAGAGGAATATATTTTAATT+TGG | + | chr5.3:7204968-7204987 | MS.gene21486:intron | 15.0% |
| !!! | TGCTATTTAAACAAATAAAT+AGG | + | chr5.3:7202482-7202501 | MS.gene21486:intron | 15.0% |
| !!! | TTCTTATTATATTTTGTCTA+AGG | + | chr5.3:7204504-7204523 | MS.gene21486:intron | 15.0% |
| !!! | TTTGGTTTTTTATTGTATTA+TGG | - | chr5.3:7203155-7203174 | None:intergenic | 15.0% |
| !! | AAAACACAAATTATAGAGAA+AGG | - | chr5.3:7202667-7202686 | None:intergenic | 20.0% |
| !! | AAACACAAATTATAGAGAAA+GGG | - | chr5.3:7202666-7202685 | None:intergenic | 20.0% |
| !! | AAACATGTGTAGAAAAAATA+AGG | - | chr5.3:7201417-7201436 | None:intergenic | 20.0% |
| !! | AATAAAGAAATGTGAAAAGT+TGG | - | chr5.3:7204303-7204322 | None:intergenic | 20.0% |
| !! | AATGCAATTCTTAAGTAATT+TGG | - | chr5.3:7204847-7204866 | None:intergenic | 20.0% |
| !! | AATTATGGCTAAAATGTAAT+TGG | + | chr5.3:7201061-7201080 | MS.gene21486:intron | 20.0% |
| !! | ATGATAACAAATAAAGCTTT+AGG | - | chr5.3:7201561-7201580 | None:intergenic | 20.0% |
| !! | ATTAACATTGAATGAACATT+AGG | - | chr5.3:7202824-7202843 | None:intergenic | 20.0% |
| !! | ATTATGGCTAAAATGTAATT+GGG | + | chr5.3:7201062-7201081 | MS.gene21486:intron | 20.0% |
| !! | ATTTACTTATTTATTGGTGT+CGG | + | chr5.3:7201769-7201788 | MS.gene21486:CDS | 20.0% |
| !! | CTAAATCCAAAAATATTTCA+TGG | + | chr5.3:7201888-7201907 | MS.gene21486:intron | 20.0% |
| !! | GAAAAATGTCTTATGTAAAA+AGG | - | chr5.3:7205797-7205816 | None:intergenic | 20.0% |
| !! | GCTTCATAATGTAAAATTAA+TGG | + | chr5.3:7201264-7201283 | MS.gene21486:intron | 20.0% |
| !! | TAAACAAAAAGTTGTTTGAT+TGG | + | chr5.3:7202322-7202341 | MS.gene21486:intron | 20.0% |
| !! | TATATTAATTGAAACTTGTG+TGG | - | chr5.3:7201914-7201933 | None:intergenic | 20.0% |
| !! | TATCAAATTAACAAACTTGT+CGG | - | chr5.3:7202912-7202931 | None:intergenic | 20.0% |
| !! | TATTTGTTTAAATAGCATAC+GGG | - | chr5.3:7202479-7202498 | None:intergenic | 20.0% |
| !! | TTTCAATTTCAAATTGGATT+GGG | + | chr5.3:7203813-7203832 | MS.gene21486:intron | 20.0% |
| !!! | AACAAAGTATTCAATTTTAG+TGG | + | chr5.3:7202040-7202059 | MS.gene21486:intron | 20.0% |
| !!! | AATTTATGATCTGAAATTGA+AGG | + | chr5.3:7202149-7202168 | MS.gene21486:intron | 20.0% |
| !!! | ACTTTGATAGATTTTACATA+AGG | + | chr5.3:7205228-7205247 | MS.gene21486:intron | 20.0% |
| !!! | AGTTTCTTTTCTTAAACAAA+AGG | - | chr5.3:7201332-7201351 | None:intergenic | 20.0% |
| !!! | ATTGATTATTAACACCATTT+TGG | + | chr5.3:7203935-7203954 | MS.gene21486:intron | 20.0% |
| !!! | TTGATAATGATTGAAAATGA+AGG | + | chr5.3:7202926-7202945 | MS.gene21486:intron | 20.0% |
| !!! | TTGTATTATGGATTTTCTTA+TGG | - | chr5.3:7203143-7203162 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTTTTTCTTTCC+AGG | + | chr5.3:7202194-7202213 | MS.gene21486:intron | 20.0% |
| ! | AAATATCATCCCATGAATAT+TGG | + | chr5.3:7202428-7202447 | MS.gene21486:intron | 25.0% |
| ! | AATGTAAATGGATCAAAGTT+AGG | + | chr5.3:7203663-7203682 | MS.gene21486:intron | 25.0% |
| ! | ACCTAATGTTCATTCAATAA+AGG | + | chr5.3:7202726-7202745 | MS.gene21486:intron | 25.0% |
| ! | ACTTATCAACCAATATTCAT+GGG | - | chr5.3:7202440-7202459 | None:intergenic | 25.0% |
| ! | ATAATCTTTGATAGATTTCC+TGG | + | chr5.3:7205175-7205194 | MS.gene21486:intron | 25.0% |
| ! | ATAGTGCTCTAATTCAATAT+GGG | + | chr5.3:7200703-7200722 | MS.gene21486:CDS | 25.0% |
| ! | ATGACCATTCTTATAGATAT+AGG | + | chr5.3:7203022-7203041 | MS.gene21486:intron | 25.0% |
| ! | ATTACATAAAATTCCGGTTA+AGG | - | chr5.3:7205737-7205756 | None:intergenic | 25.0% |
| ! | CAAATCCAAGCATAAAAATA+TGG | - | chr5.3:7201172-7201191 | None:intergenic | 25.0% |
| ! | CCTAATGTTCATTCAATAAA+GGG | + | chr5.3:7202727-7202746 | MS.gene21486:intron | 25.0% |
| ! | CTTTCAATTTCAAATTGGAT+TGG | + | chr5.3:7203812-7203831 | MS.gene21486:intron | 25.0% |
| ! | GAATATCATTCCTTTCAAAA+AGG | - | chr5.3:7203187-7203206 | None:intergenic | 25.0% |
| ! | GAATTGTGATCAATATGTTA+GGG | + | chr5.3:7205890-7205909 | MS.gene21486:intron | 25.0% |
| ! | TACTTAGCTAATTATTTGTC+TGG | - | chr5.3:7202998-7203017 | None:intergenic | 25.0% |
| ! | TACTTATCAACCAATATTCA+TGG | - | chr5.3:7202441-7202460 | None:intergenic | 25.0% |
| ! | TCAAAAAGGAATTCTTAGTT+TGG | - | chr5.3:7203173-7203192 | None:intergenic | 25.0% |
| ! | TGAAGTTTAAAAGCTTCAAA+AGG | - | chr5.3:7200557-7200576 | None:intergenic | 25.0% |
| ! | TGAATTGTGATCAATATGTT+AGG | + | chr5.3:7205889-7205908 | MS.gene21486:intron | 25.0% |
| ! | TGTTTGACAAACATGAAAAT+GGG | - | chr5.3:7204470-7204489 | None:intergenic | 25.0% |
| ! | TGTTTGTCAAACAAAAAATC+TGG | + | chr5.3:7204477-7204496 | MS.gene21486:intron | 25.0% |
| ! | TTAATTGCATGTTTCATGTT+TGG | + | chr5.3:7201739-7201758 | MS.gene21486:intron | 25.0% |
| ! | TTACAGTAATGACAAATACA+AGG | - | chr5.3:7201519-7201538 | None:intergenic | 25.0% |
| ! | TTGAATACTTTGTTCACTTA+AGG | - | chr5.3:7202034-7202053 | None:intergenic | 25.0% |
| ! | TTGTTTGACAAACATGAAAA+TGG | - | chr5.3:7204471-7204490 | None:intergenic | 25.0% |
| ! | TTTCAGATCATAAATTACCA+TGG | - | chr5.3:7202145-7202164 | None:intergenic | 25.0% |
| !! | AACTTGCTTCAGAAAAATTA+TGG | + | chr5.3:7201046-7201065 | MS.gene21486:intron | 25.0% |
| !! | ACTAAGAATTCCTTTTTGAA+AGG | + | chr5.3:7203174-7203193 | MS.gene21486:intron | 25.0% |
| !! | ATATTCATGGGATGATATTT+TGG | - | chr5.3:7202428-7202447 | None:intergenic | 25.0% |
| !! | ATCTGAAATTGAAGGTATAT+GGG | + | chr5.3:7202157-7202176 | MS.gene21486:intron | 25.0% |
| !! | TACTTTTGCGACATTATTTT+GGG | - | chr5.3:7203380-7203399 | None:intergenic | 25.0% |
| !! | TATATTTTGCTGCATTAGTT+TGG | + | chr5.3:7200891-7200910 | MS.gene21486:intron | 25.0% |
| !! | TGATATTATGAGTTGAACAT+TGG | - | chr5.3:7201619-7201638 | None:intergenic | 25.0% |
| !!! | ACTTTTAATTGTACAGAAAC+AGG | - | chr5.3:7204938-7204957 | None:intergenic | 25.0% |
| !!! | CATATTTTTATGCTTGGATT+TGG | + | chr5.3:7201170-7201189 | MS.gene21486:intron | 25.0% |
| !!! | GAGATTTTGATATGATGTAT+GGG | + | chr5.3:7202238-7202257 | MS.gene21486:CDS | 25.0% |
| !!! | GCTTTATTTGTTATCATTCA+TGG | + | chr5.3:7201564-7201583 | MS.gene21486:intron | 25.0% |
| !!! | GGTAGAAATTGTTTTTCATT+TGG | + | chr5.3:7205249-7205268 | MS.gene21486:intron | 25.0% |
| !!! | TTTCTTATGGTTTTAGTTCT+TGG | - | chr5.3:7203130-7203149 | None:intergenic | 25.0% |
| AAATGCTGTGGAAATCATAT+TGG | + | chr5.3:7203240-7203259 | MS.gene21486:intron | 30.0% | |
| AAGAATTACGTCAAAGTGAA+AGG | - | chr5.3:7201656-7201675 | None:intergenic | 30.0% | |
| AATGCAATGACATTATAGTC+AGG | - | chr5.3:7205589-7205608 | None:intergenic | 30.0% | |
| AATGTATTCCAATCTCTTAG+AGG | - | chr5.3:7200972-7200991 | None:intergenic | 30.0% | |
| ACCAAAACATTCAGAAAGAA+AGG | + | chr5.3:7202582-7202601 | MS.gene21486:intron | 30.0% | |
| ATATTGATCACAATTCAGAG+TGG | - | chr5.3:7205886-7205905 | None:intergenic | 30.0% | |
| ATCAAACTCAATACACATAG+TGG | - | chr5.3:7201148-7201167 | None:intergenic | 30.0% | |
| ATGATGAGCTTATTAATCCA+AGG | + | chr5.3:7204610-7204629 | MS.gene21486:CDS | 30.0% | |
| ATTTACAGCCCTAACAATAA+GGG | - | chr5.3:7204568-7204587 | None:intergenic | 30.0% | |
| ATTTGGTATATCTAAGCACT+TGG | + | chr5.3:7204985-7205004 | MS.gene21486:intron | 30.0% | |
| CAAGGACAAAATACTACATA+TGG | - | chr5.3:7201501-7201520 | None:intergenic | 30.0% | |
| CATCAATTCTACAGCAATAA+GGG | + | chr5.3:7203638-7203657 | MS.gene21486:intron | 30.0% | |
| CATGTATTAGTGTAAGGAAA+GGG | + | chr5.3:7204067-7204086 | MS.gene21486:intron | 30.0% | |
| CCCTTTATTGAATGAACATT+AGG | - | chr5.3:7202730-7202749 | None:intergenic | 30.0% | |
| CGTATGCATATTGTTTGTAT+AGG | + | chr5.3:7201680-7201699 | MS.gene21486:intron | 30.0% | |
| CTAGGAACTTGGTTATTATT+GGG | - | chr5.3:7205108-7205127 | None:intergenic | 30.0% | |
| CTCTATCATGTATTAGTGTA+AGG | + | chr5.3:7204061-7204080 | MS.gene21486:intron | 30.0% | |
| CTGAAAATACTTGGATGAAA+GGG | - | chr5.3:7203605-7203624 | None:intergenic | 30.0% | |
| CTGTCATCAAATATGATTCA+TGG | - | chr5.3:7205501-7205520 | None:intergenic | 30.0% | |
| CTGTGCTTAAGTAATAACTA+GGG | + | chr5.3:7201242-7201261 | MS.gene21486:intron | 30.0% | |
| GAAATTCCAACAGATAAAAC+TGG | + | chr5.3:7202216-7202235 | MS.gene21486:CDS | 30.0% | |
| GAAGTAAGTAAAATTCTCCA+TGG | + | chr5.3:7202125-7202144 | MS.gene21486:intron | 30.0% | |
| GATAGTGCTCTAATTCAATA+TGG | + | chr5.3:7200702-7200721 | MS.gene21486:CDS | 30.0% | |
| GCAATAAGGGTAAATGTAAA+TGG | + | chr5.3:7203651-7203670 | MS.gene21486:intron | 30.0% | |
| GCTAAGCTTATTTCGTTATT+TGG | + | chr5.3:7201286-7201305 | MS.gene21486:intron | 30.0% | |
| GGATCCTATATCTATAAGAA+TGG | - | chr5.3:7203029-7203048 | None:intergenic | 30.0% | |
| TATCTGATATTATGTTCTGC+TGG | + | chr5.3:7204790-7204809 | MS.gene21486:intron | 30.0% | |
| TATTTACAGCCCTAACAATA+AGG | - | chr5.3:7204569-7204588 | None:intergenic | 30.0% | |
| TCATGTATTAGTGTAAGGAA+AGG | + | chr5.3:7204066-7204085 | MS.gene21486:intron | 30.0% | |
| TCCATGCATCATTTCTATTT+GGG | - | chr5.3:7204719-7204738 | None:intergenic | 30.0% | |
| TCTCACTAGAAAAGATTTAG+AGG | + | chr5.3:7204202-7204221 | MS.gene21486:intron | 30.0% | |
| TCTGTGCTTAAGTAATAACT+AGG | + | chr5.3:7201241-7201260 | MS.gene21486:intron | 30.0% | |
| TGATTATCCACCATCAAAAA+AGG | + | chr5.3:7204382-7204401 | MS.gene21486:intron | 30.0% | |
| TGTACAATACACCAAATGAT+GGG | - | chr5.3:7202801-7202820 | None:intergenic | 30.0% | |
| TTAGCATAAGACGTTTGATA+AGG | - | chr5.3:7201872-7201891 | None:intergenic | 30.0% | |
| TTATTGTTAGGGCTGTAAAT+AGG | + | chr5.3:7204568-7204587 | MS.gene21486:CDS | 30.0% | |
| TTCTATTCTTTGACAAAAGC+TGG | + | chr5.3:7202099-7202118 | MS.gene21486:CDS | 30.0% | |
| TTGATAAGGATACACAAATC+AGG | - | chr5.3:7201858-7201877 | None:intergenic | 30.0% | |
| TTGATGTCTCAATTCTCAAA+TGG | + | chr5.3:7205700-7205719 | MS.gene21486:intron | 30.0% | |
| TTTCACACATGCAATCATTA+AGG | + | chr5.3:7202633-7202652 | MS.gene21486:intron | 30.0% | |
| TTTGGTATATCTAAGCACTT+GGG | + | chr5.3:7204986-7205005 | MS.gene21486:intron | 30.0% | |
| ! | ACCTTTCTTTCTGAATGTTT+TGG | - | chr5.3:7202586-7202605 | None:intergenic | 30.0% |
| ! | ATTATTGTCCTCTAAGAGAT+TGG | + | chr5.3:7200961-7200980 | MS.gene21486:intron | 30.0% |
| ! | CCAATTTGAAATTGAAAGCT+CGG | - | chr5.3:7203810-7203829 | None:intergenic | 30.0% |
| ! | GAAAAGATTTAGAGGTACAA+TGG | + | chr5.3:7204210-7204229 | MS.gene21486:intron | 30.0% |
| ! | GATCTGAAATTGAAGGTATA+TGG | + | chr5.3:7202156-7202175 | MS.gene21486:intron | 30.0% |
| ! | GCTTTTGTCAAAGAATAGAA+AGG | - | chr5.3:7202099-7202118 | None:intergenic | 30.0% |
| ! | TTACTTCTTTGACTCGTAAA+AGG | + | chr5.3:7200855-7200874 | MS.gene21486:intron | 30.0% |
| ! | TTTCAGTCTGAAATTTCCAA+TGG | + | chr5.3:7202850-7202869 | MS.gene21486:intron | 30.0% |
| ! | TTTTATCTGTTGGAATTTCC+TGG | - | chr5.3:7202215-7202234 | None:intergenic | 30.0% |
| !! | AAATCTCCAGTTTTATCTGT+TGG | - | chr5.3:7202225-7202244 | None:intergenic | 30.0% |
| !! | ATTCTGTTTTGTGCTTTTTG+TGG | - | chr5.3:7205772-7205791 | None:intergenic | 30.0% |
| !! | CTACTTTTGCGACATTATTT+TGG | - | chr5.3:7203381-7203400 | None:intergenic | 30.0% |
| !! | CTCTTCATTGTTTCTTGTTT+TGG | + | chr5.3:7201799-7201818 | MS.gene21486:CDS | 30.0% |
| !! | GATAGAAAACTTTTGAGAAC+AGG | + | chr5.3:7203896-7203915 | MS.gene21486:intron | 30.0% |
| !! | GGAGATTTTGATATGATGTA+TGG | + | chr5.3:7202237-7202256 | MS.gene21486:CDS | 30.0% |
| !! | TGATGCCATATTTTTATGCT+TGG | + | chr5.3:7201164-7201183 | MS.gene21486:intron | 30.0% |
| !! | TTTTGAGAACAGGAAAACAA+GGG | + | chr5.3:7203906-7203925 | MS.gene21486:intron | 30.0% |
| !!! | ACTTTTTTGTGTACCATTCT+AGG | - | chr5.3:7201380-7201399 | None:intergenic | 30.0% |
| !!! | CTTTTTTGACAAATTGCCTA+AGG | + | chr5.3:7200761-7200780 | MS.gene21486:CDS | 30.0% |
| !!! | GTTTCTTGTTTTGGTTGTAT+TGG | + | chr5.3:7201808-7201827 | MS.gene21486:CDS | 30.0% |
| !!! | TATGGTTTTAGTTCTTGGTT+TGG | - | chr5.3:7203125-7203144 | None:intergenic | 30.0% |
| !!! | TTTTTGATGGTGGATAATCA+GGG | - | chr5.3:7204382-7204401 | None:intergenic | 30.0% |
| !!! | TTTTTTGATGGTGGATAATC+AGG | - | chr5.3:7204383-7204402 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTGTGCAGAACC+AGG | - | chr5.3:7205196-7205215 | None:intergenic | 30.0% |
| AAATTTCCAATGGTCATGCA+AGG | + | chr5.3:7202860-7202879 | MS.gene21486:intron | 35.0% | |
| AACTATAAAAGCCTCTGTCA+AGG | - | chr5.3:7203339-7203358 | None:intergenic | 35.0% | |
| AATACGATAAACTGTGCTTC+AGG | + | chr5.3:7203458-7203477 | MS.gene21486:intron | 35.0% | |
| AATAGCATTAGAGTAGGTGA+AGG | - | chr5.3:7202703-7202722 | None:intergenic | 35.0% | |
| ACAATGATATGCCCCAAAAA+TGG | - | chr5.3:7200818-7200837 | None:intergenic | 35.0% | |
| ACACAAAACGTCACATACAA+AGG | - | chr5.3:7201967-7201986 | None:intergenic | 35.0% | |
| AGAATTGGGATATTGTGAGA+TGG | + | chr5.3:7202271-7202290 | MS.gene21486:CDS | 35.0% | |
| AGATAGTCCAATAGCTATAG+AGG | + | chr5.3:7204163-7204182 | MS.gene21486:intron | 35.0% | |
| AGATTGCTAAATAACAGAGC+TGG | - | chr5.3:7205822-7205841 | None:intergenic | 35.0% | |
| AGGTCCTACATTATGAACTT+TGG | - | chr5.3:7203050-7203069 | None:intergenic | 35.0% | |
| AGGTCTAATTATGCAAACCT+AGG | + | chr5.3:7202602-7202621 | MS.gene21486:intron | 35.0% | |
| AGTGAATCCCAAAGAATACA+GGG | + | chr5.3:7203271-7203290 | MS.gene21486:intron | 35.0% | |
| ATAATGTCGCAAAAGTAGCA+TGG | + | chr5.3:7203383-7203402 | MS.gene21486:intron | 35.0% | |
| ATCCAACACAAAAACACCTA+TGG | - | chr5.3:7203497-7203516 | None:intergenic | 35.0% | |
| ATTACGTCAAAGTGAAAGGA+AGG | - | chr5.3:7201652-7201671 | None:intergenic | 35.0% | |
| CAATTAAAGTGAGACAGTAC+TGG | - | chr5.3:7201726-7201745 | None:intergenic | 35.0% | |
| CACAAAACGTCACATACAAA+GGG | - | chr5.3:7201966-7201985 | None:intergenic | 35.0% | |
| CCATCAATTCTACAGCAATA+AGG | + | chr5.3:7203637-7203656 | MS.gene21486:intron | 35.0% | |
| CCGAGCTTTCAATTTCAAAT+TGG | + | chr5.3:7203807-7203826 | MS.gene21486:intron | 35.0% | |
| CCTTATTGCTGTAGAATTGA+TGG | - | chr5.3:7203640-7203659 | None:intergenic | 35.0% | |
| CTAATTATTTGTCTGGCAAC+TGG | - | chr5.3:7202991-7203010 | None:intergenic | 35.0% | |
| CTCCATGCATCATTTCTATT+TGG | - | chr5.3:7204720-7204739 | None:intergenic | 35.0% | |
| CTGGAATTAATGGAACTGTA+AGG | - | chr5.3:7202972-7202991 | None:intergenic | 35.0% | |
| CTTGTTAGCCCTTATTGTTA+GGG | + | chr5.3:7204557-7204576 | MS.gene21486:CDS | 35.0% | |
| GAATGCTTGAAATCTTGATG+AGG | + | chr5.3:7203851-7203870 | MS.gene21486:intron | 35.0% | |
| GAATTGGGATATTGTGAGAT+GGG | + | chr5.3:7202272-7202291 | MS.gene21486:CDS | 35.0% | |
| GAGACATCAAATCAACAGAA+TGG | - | chr5.3:7205690-7205709 | None:intergenic | 35.0% | |
| GATAGTCCAATAGCTATAGA+GGG | + | chr5.3:7204164-7204183 | MS.gene21486:intron | 35.0% | |
| GCGATTCTACGAGAAAATTT+GGG | - | chr5.3:7203718-7203737 | None:intergenic | 35.0% | |
| GCTAGGAACTTGGTTATTAT+TGG | - | chr5.3:7205109-7205128 | None:intergenic | 35.0% | |
| GCTGAAAATACTTGGATGAA+AGG | - | chr5.3:7203606-7203625 | None:intergenic | 35.0% | |
| GCTTGTCTATTATTGAGCAA+TGG | - | chr5.3:7204651-7204670 | None:intergenic | 35.0% | |
| GCTTTATACACTTCCTAGAA+TGG | + | chr5.3:7201364-7201383 | MS.gene21486:intron | 35.0% | |
| GGATCCAAAGTTCATAATGT+AGG | + | chr5.3:7203043-7203062 | MS.gene21486:intron | 35.0% | |
| GGTCTAATTATGCAAACCTA+GGG | + | chr5.3:7202603-7202622 | MS.gene21486:intron | 35.0% | |
| GTCATTACTGTAAATTGACG+AGG | + | chr5.3:7201526-7201545 | MS.gene21486:intron | 35.0% | |
| GTGTACAATACACCAAATGA+TGG | - | chr5.3:7202802-7202821 | None:intergenic | 35.0% | |
| TAAAAGCTAGTGATCAAGGA+GGG | + | chr5.3:7205020-7205039 | MS.gene21486:intron | 35.0% | |
| TAATGAGAAATGAAGTCACG+AGG | + | chr5.3:7204322-7204341 | MS.gene21486:intron | 35.0% | |
| TAATGTCGCAAAAGTAGCAT+GGG | + | chr5.3:7203384-7203403 | MS.gene21486:intron | 35.0% | |
| TAGTGGTTGCTGAAAATACT+TGG | - | chr5.3:7203614-7203633 | None:intergenic | 35.0% | |
| TCACCTCTTACACACATAAA+TGG | + | chr5.3:7205462-7205481 | MS.gene21486:intron | 35.0% | |
| TCTTGTTAGCCCTTATTGTT+AGG | + | chr5.3:7204556-7204575 | MS.gene21486:CDS | 35.0% | |
| TGACCATTTATGTGTGTAAG+AGG | - | chr5.3:7205468-7205487 | None:intergenic | 35.0% | |
| TGCGATTCTACGAGAAAATT+TGG | - | chr5.3:7203719-7203738 | None:intergenic | 35.0% | |
| TGGGTATTCCAAAAGTAGTA+TGG | + | chr5.3:7203403-7203422 | MS.gene21486:intron | 35.0% | |
| TGTCTCAATTCTCAAATGGA+TGG | + | chr5.3:7205704-7205723 | MS.gene21486:intron | 35.0% | |
| TTAAAAGCTAGTGATCAAGG+AGG | + | chr5.3:7205019-7205038 | MS.gene21486:intron | 35.0% | |
| TTGACAGTCATCAATGACAA+CGG | + | chr5.3:7203980-7203999 | MS.gene21486:intron | 35.0% | |
| TTGCTCAATAATAGACAAGC+AGG | + | chr5.3:7204651-7204670 | MS.gene21486:CDS | 35.0% | |
| TTGGGGGTCTAATATAATGA+AGG | + | chr5.3:7204417-7204436 | MS.gene21486:intron | 35.0% | |
| TTTAGTCTCATAGCTGATCA+TGG | + | chr5.3:7205945-7205964 | MS.gene21486:intron | 35.0% | |
| TTTATCGTCATCAGAAGTCT+TGG | - | chr5.3:7200640-7200659 | None:intergenic | 35.0% | |
| ! | AAAAAGGAGAGAGGTATACT+TGG | + | chr5.3:7204398-7204417 | MS.gene21486:intron | 35.0% |
| ! | AAAAGGAGAGAGGTATACTT+GGG | + | chr5.3:7204399-7204418 | MS.gene21486:intron | 35.0% |
| ! | AGTTGATTCTTAAGTGTCTC+TGG | - | chr5.3:7201096-7201115 | None:intergenic | 35.0% |
| ! | CAGAGGCTTTTATAGTTGAA+AGG | + | chr5.3:7203342-7203361 | MS.gene21486:intron | 35.0% |
| ! | CAGCATAACCATACTACTTT+TGG | - | chr5.3:7203414-7203433 | None:intergenic | 35.0% |
| ! | GTGTGGCCATGAAATATTTT+TGG | - | chr5.3:7201897-7201916 | None:intergenic | 35.0% |
| ! | TAAAAGTATGCTCTCACTAG+AGG | + | chr5.3:7204951-7204970 | MS.gene21486:intron | 35.0% |
| ! | TCTTGTTGTATGATCATGCT+AGG | - | chr5.3:7205126-7205145 | None:intergenic | 35.0% |
| !! | CATACGGGTTTGTTAAAACT+AGG | - | chr5.3:7202464-7202483 | None:intergenic | 35.0% |
| !! | CTTTTGAGAACAGGAAAACA+AGG | + | chr5.3:7203905-7203924 | MS.gene21486:intron | 35.0% |
| !! | TGTAGAATTGATGGACTTAG+TGG | - | chr5.3:7203631-7203650 | None:intergenic | 35.0% |
| !!! | ATACCTCTCTCCTTTTTTGA+TGG | - | chr5.3:7204395-7204414 | None:intergenic | 35.0% |
| !!! | ATCAATTAGCTTTTGAGGCA+TGG | + | chr5.3:7201122-7201141 | MS.gene21486:intron | 35.0% |
| !!! | CCTTGATCACTAGCTTTTAA+GGG | - | chr5.3:7205019-7205038 | None:intergenic | 35.0% |
| !!! | CTCTCATCAATTAGCTTTTG+AGG | + | chr5.3:7201117-7201136 | MS.gene21486:intron | 35.0% |
| !!! | TCCTTGATCACTAGCTTTTA+AGG | - | chr5.3:7205020-7205039 | None:intergenic | 35.0% |
| AACTTCATATTGACCGTGAC+TGG | + | chr5.3:7200570-7200589 | MS.gene21486:CDS | 40.0% | |
| AATCCCAAAGAATACAGGGA+AGG | + | chr5.3:7203275-7203294 | MS.gene21486:intron | 40.0% | |
| AGGAATGTGTATCGAATTGC+AGG | + | chr5.3:7204524-7204543 | MS.gene21486:intron | 40.0% | |
| ATACAAAGGGAGAGTGAAAG+AGG | - | chr5.3:7201953-7201972 | None:intergenic | 40.0% | |
| ATACTGCTCCTTGTTCAGTA+TGG | + | chr5.3:7206004-7206023 | MS.gene21486:intron | 40.0% | |
| ATAGTAGTCGATGTGGTACA+TGG | + | chr5.3:7205079-7205098 | MS.gene21486:intron | 40.0% | |
| ATCCATACAACCTCACCTAA+AGG | - | chr5.3:7204024-7204043 | None:intergenic | 40.0% | |
| ATGGGTTTCTCAGAGAGAAT+TGG | + | chr5.3:7202256-7202275 | MS.gene21486:CDS | 40.0% | |
| CATTGTCCCTCTATAGCTAT+TGG | - | chr5.3:7204173-7204192 | None:intergenic | 40.0% | |
| CCCTTAAAAGCTAGTGATCA+AGG | + | chr5.3:7205016-7205035 | MS.gene21486:intron | 40.0% | |
| CTGTGGAAATCATATTGGAG+CGG | + | chr5.3:7203245-7203264 | MS.gene21486:intron | 40.0% | |
| GAAATGATGCATGGAGTACA+CGG | + | chr5.3:7204724-7204743 | MS.gene21486:CDS | 40.0% | |
| GAGTGAATCCCAAAGAATAC+AGG | + | chr5.3:7203270-7203289 | MS.gene21486:intron | 40.0% | |
| GCCCAAATAGAAATGATGCA+TGG | + | chr5.3:7204715-7204734 | MS.gene21486:CDS | 40.0% | |
| GCTGAAGACTAACATGATTG+TGG | + | chr5.3:7203430-7203449 | MS.gene21486:intron | 40.0% | |
| GGGTATTCTCTTACGTAGTT+TGG | + | chr5.3:7204087-7204106 | MS.gene21486:intron | 40.0% | |
| GGTGTCAATAGCATTAGAGT+AGG | - | chr5.3:7202709-7202728 | None:intergenic | 40.0% | |
| GTATGATCATGCTAGGAACT+TGG | - | chr5.3:7205119-7205138 | None:intergenic | 40.0% | |
| GTGCTCTAATTCAATATGGG+CGG | + | chr5.3:7200706-7200725 | MS.gene21486:CDS | 40.0% | |
| GTTACACCGTTTAACCCTTA+CGG | - | chr5.3:7201202-7201221 | None:intergenic | 40.0% | |
| TACTGCTCCTTGTTCAGTAT+GGG | + | chr5.3:7206005-7206024 | MS.gene21486:intron | 40.0% | |
| TAGTAGTCGATGTGGTACAT+GGG | + | chr5.3:7205080-7205099 | MS.gene21486:intron | 40.0% | |
| TATCAAGCCCATACTGAACA+AGG | - | chr5.3:7206015-7206034 | None:intergenic | 40.0% | |
| TCATCACTATCGTAATCTGC+TGG | - | chr5.3:7204594-7204613 | None:intergenic | 40.0% | |
| TCATTCAATAAAGGGCAACC+CGG | + | chr5.3:7202735-7202754 | MS.gene21486:intron | 40.0% | |
| TCCATACAACCTCACCTAAA+GGG | - | chr5.3:7204023-7204042 | None:intergenic | 40.0% | |
| TCTCTCACTTGTAAATGCTG+TGG | + | chr5.3:7203228-7203247 | MS.gene21486:intron | 40.0% | |
| TCTTGGGATTGTCATCTTTG+AGG | + | chr5.3:7202299-7202318 | MS.gene21486:CDS | 40.0% | |
| TGGGAGTTTCAAAGCAAGAA+AGG | - | chr5.3:7203574-7203593 | None:intergenic | 40.0% | |
| TGGGTTTCTCAGAGAGAATT+GGG | + | chr5.3:7202257-7202276 | MS.gene21486:CDS | 40.0% | |
| TGTCTGGCAACTGGAATTAA+TGG | - | chr5.3:7202982-7203001 | None:intergenic | 40.0% | |
| TGTGGAAATCATATTGGAGC+GGG | + | chr5.3:7203246-7203265 | MS.gene21486:intron | 40.0% | |
| TGTGTGAAAATGAATGCCCT+AGG | - | chr5.3:7202622-7202641 | None:intergenic | 40.0% | |
| TGTTAACCTTGCATGACCAT+TGG | - | chr5.3:7202869-7202888 | None:intergenic | 40.0% | |
| TTAATCCAAGGCAGCAAGTT+CGG | + | chr5.3:7204622-7204641 | MS.gene21486:CDS | 40.0% | |
| TTAATCCTAGGAGCTTCGAT+GGG | - | chr5.3:7203785-7203804 | None:intergenic | 40.0% | |
| TTACACCGTTTAACCCTTAC+GGG | - | chr5.3:7201201-7201220 | None:intergenic | 40.0% | |
| TTATGTGTGTAAGAGGTGAG+AGG | - | chr5.3:7205461-7205480 | None:intergenic | 40.0% | |
| TTGACAAATTGCCTAAGGCT+TGG | + | chr5.3:7200766-7200785 | MS.gene21486:CDS | 40.0% | |
| TTGCATGTTTCATGTTTGGC+AGG | + | chr5.3:7201743-7201762 | MS.gene21486:intron | 40.0% | |
| TTTAATCCTAGGAGCTTCGA+TGG | - | chr5.3:7203786-7203805 | None:intergenic | 40.0% | |
| TTTAGTGGCACTGTTGATCT+TGG | + | chr5.3:7202055-7202074 | MS.gene21486:CDS | 40.0% | |
| ! | AAACAAGGCCTTTTCCCTTT+AGG | + | chr5.3:7204006-7204025 | MS.gene21486:intron | 40.0% |
| ! | AAAGGAGAGAGGTATACTTG+GGG | + | chr5.3:7204400-7204419 | MS.gene21486:intron | 40.0% |
| ! | AAGCAAGAAAGGCTTGTTTC+CGG | - | chr5.3:7203563-7203582 | None:intergenic | 40.0% |
| ! | ATGTACCACATCGACTACTA+TGG | - | chr5.3:7205080-7205099 | None:intergenic | 40.0% |
| ! | GTTTGGCTATTGTGGGTTAT+GGG | + | chr5.3:7200592-7200611 | MS.gene21486:CDS | 40.0% |
| ! | TAAAGTGAGACAGTACTGGA+TGG | - | chr5.3:7201722-7201741 | None:intergenic | 40.0% |
| ! | TGGATGAAAGGGTTCACTTT+TGG | - | chr5.3:7203594-7203613 | None:intergenic | 40.0% |
| ! | TGTACCACATCGACTACTAT+GGG | - | chr5.3:7205079-7205098 | None:intergenic | 40.0% |
| !! | GAAAGCTCGGTTTTAATCCT+AGG | - | chr5.3:7203797-7203816 | None:intergenic | 40.0% |
| !! | GGATGAAAGGGTTCACTTTT+GGG | - | chr5.3:7203593-7203612 | None:intergenic | 40.0% |
| !! | TGCCATAGGTGTTTTTGTGT+TGG | + | chr5.3:7203492-7203511 | MS.gene21486:intron | 40.0% |
| !!! | CTCTTTTCCTGCCATTTTTG+GGG | + | chr5.3:7200804-7200823 | MS.gene21486:intron | 40.0% |
| !!! | GATCACTAGCTTTTAAGGGA+GGG | - | chr5.3:7205015-7205034 | None:intergenic | 40.0% |
| !!! | GCTCTTTTCCTGCCATTTTT+GGG | + | chr5.3:7200803-7200822 | MS.gene21486:intron | 40.0% |
| !!! | TGATCACTAGCTTTTAAGGG+AGG | - | chr5.3:7205016-7205035 | None:intergenic | 40.0% |
| !!! | TGCTCTTTTCCTGCCATTTT+TGG | + | chr5.3:7200802-7200821 | MS.gene21486:intron | 40.0% |
| AAGCAAGCATACCAAGCCTT+AGG | - | chr5.3:7200780-7200799 | None:intergenic | 45.0% | |
| AAGTCACGAGGATATACTCG+TGG | + | chr5.3:7204334-7204353 | MS.gene21486:intron | 45.0% | |
| ACTGTTGATCTTGGTAGAGC+TGG | + | chr5.3:7202064-7202083 | MS.gene21486:CDS | 45.0% | |
| AGAGACACAGCCAAAAGCAA+CGG | - | chr5.3:7200732-7200751 | None:intergenic | 45.0% | |
| AGGATACAAGCATGTGCCAT+AGG | + | chr5.3:7203478-7203497 | MS.gene21486:intron | 45.0% | |
| AGTATGCCTAAATCCAGGTC+AGG | - | chr5.3:7204268-7204287 | None:intergenic | 45.0% | |
| AGTGGAGTATGCCTAAATCC+AGG | - | chr5.3:7204273-7204292 | None:intergenic | 45.0% | |
| ATCGACTACTATGGGATGCT+CGG | - | chr5.3:7205071-7205090 | None:intergenic | 45.0% | |
| ATTACATCCAGCCTCCTTAC+CGG | - | chr5.3:7204140-7204159 | None:intergenic | 45.0% | |
| CAACCTCACCTAAAGGGAAA+AGG | - | chr5.3:7204017-7204036 | None:intergenic | 45.0% | |
| CACAATAGCCAAACCAGTCA+CGG | - | chr5.3:7200586-7200605 | None:intergenic | 45.0% | |
| CAGCCTTCCCTGTATTCTTT+GGG | - | chr5.3:7203281-7203300 | None:intergenic | 45.0% | |
| CATCATTTCTATTTGGGCGC+TGG | - | chr5.3:7204713-7204732 | None:intergenic | 45.0% | |
| CCACCATCAAAAAAGGAGAG+AGG | + | chr5.3:7204389-7204408 | MS.gene21486:intron | 45.0% | |
| CTCCTCAATCATACCGAAAC+CGG | + | chr5.3:7203541-7203560 | MS.gene21486:intron | 45.0% | |
| CTGTTGATCTTGGTAGAGCT+GGG | + | chr5.3:7202065-7202084 | MS.gene21486:CDS | 45.0% | |
| GCACTATACTTGTGTGAGTG+TGG | + | chr5.3:7204872-7204891 | MS.gene21486:intron | 45.0% | |
| GGATGGCTAAACACCTTAAC+CGG | + | chr5.3:7205721-7205740 | MS.gene21486:intron | 45.0% | |
| GGGTTATGGGATCTATTTGC+TGG | + | chr5.3:7200605-7200624 | MS.gene21486:CDS | 45.0% | |
| GGTTTCGGTATGATTGAGGA+GGG | - | chr5.3:7203542-7203561 | None:intergenic | 45.0% | |
| GTATGCCTAAATCCAGGTCA+GGG | - | chr5.3:7204267-7204286 | None:intergenic | 45.0% | |
| GTGTGAGTGTGGTGTGTATA+TGG | + | chr5.3:7204883-7204902 | MS.gene21486:intron | 45.0% | |
| GTTGTATTGGAGCTACGACA+CGG | + | chr5.3:7201821-7201840 | MS.gene21486:CDS | 45.0% | |
| TACAGTGCTATGCTCGCTAT+AGG | + | chr5.3:7203072-7203091 | MS.gene21486:intron | 45.0% | |
| TACTTTCCCTTAGCAGCAAG+CGG | - | chr5.3:7202397-7202416 | None:intergenic | 45.0% | |
| TAGAATTTCAGTCCCTGACC+TGG | + | chr5.3:7204252-7204271 | MS.gene21486:intron | 45.0% | |
| TCATGCCCGTAAGGGTTAAA+CGG | + | chr5.3:7201193-7201212 | MS.gene21486:intron | 45.0% | |
| TCCAACGCCAGATATTTCTC+CGG | + | chr5.3:7200671-7200690 | MS.gene21486:CDS | 45.0% | |
| TCCCTTTAGGTGAGGTTGTA+TGG | + | chr5.3:7204019-7204038 | MS.gene21486:intron | 45.0% | |
| TCGTCTTTGAACCTTGACAG+AGG | + | chr5.3:7203325-7203344 | MS.gene21486:intron | 45.0% | |
| TCTTGATGAGGAGAATGCAC+TGG | + | chr5.3:7203863-7203882 | MS.gene21486:intron | 45.0% | |
| TGAAAAGTTGGCCACTAGAG+TGG | - | chr5.3:7204291-7204310 | None:intergenic | 45.0% | |
| TGATATGCCCCAAAAATGGC+AGG | - | chr5.3:7200814-7200833 | None:intergenic | 45.0% | |
| TTAGGCATACTCCACTCTAG+TGG | + | chr5.3:7204277-7204296 | MS.gene21486:intron | 45.0% | |
| TTCCGGTTTCGGTATGATTG+AGG | - | chr5.3:7203546-7203565 | None:intergenic | 45.0% | |
| TTGCTGGAACCTTTGCGATT+CGG | - | chr5.3:7206062-7206081 | None:intergenic | 45.0% | |
| ! | AACAGGAGCATAAGACAGGA+AGG | - | chr5.3:7204921-7204940 | None:intergenic | 45.0% |
| ! | AAGGAGAGAGGTATACTTGG+GGG | + | chr5.3:7204401-7204420 | MS.gene21486:intron | 45.0% |
| ! | AGAGAAACCGACAGAAGTAC+CGG | + | chr5.3:7204118-7204137 | MS.gene21486:intron | 45.0% |
| ! | ATCTGGCGTTGGAGAAATGT+CGG | - | chr5.3:7200664-7200683 | None:intergenic | 45.0% |
| ! | CAGAAACAGGAGCATAAGAC+AGG | - | chr5.3:7204925-7204944 | None:intergenic | 45.0% |
| ! | CATATTGACCGTGACTGGTT+TGG | + | chr5.3:7200575-7200594 | MS.gene21486:CDS | 45.0% |
| ! | GAAAGGCTTGTTTCCGGTTT+CGG | - | chr5.3:7203557-7203576 | None:intergenic | 45.0% |
| ! | GGTTTGGCTATTGTGGGTTA+TGG | + | chr5.3:7200591-7200610 | MS.gene21486:CDS | 45.0% |
| !! | ATTGTGAGATGGGTTGCTCT+TGG | + | chr5.3:7202282-7202301 | MS.gene21486:CDS | 45.0% |
| !! | GTGACTGGTTTGGCTATTGT+GGG | + | chr5.3:7200585-7200604 | MS.gene21486:CDS | 45.0% |
| !! | TGATGGTGGATAATCAGGGT+AGG | - | chr5.3:7204378-7204397 | None:intergenic | 45.0% |
| !! | TGCTCGGTGTGGTATTTAAG+TGG | - | chr5.3:7205055-7205074 | None:intergenic | 45.0% |
| !! | TTGTGAGATGGGTTGCTCTT+GGG | + | chr5.3:7202283-7202302 | MS.gene21486:CDS | 45.0% |
| !!! | CAGCGGCTTTTTTCTTCAGT+TGG | - | chr5.3:7206097-7206116 | None:intergenic | 45.0% |
| !!! | CCTCTCTCCTTTTTTGATGG+TGG | - | chr5.3:7204392-7204411 | None:intergenic | 45.0% |
| ACAACCCATCCGAATCGCAA+AGG | + | chr5.3:7206050-7206069 | MS.gene21486:CDS | 50.0% | |
| ACCGGAGAAATATCTGGCGT+TGG | - | chr5.3:7200675-7200694 | None:intergenic | 50.0% | |
| ACTTTCCCTTAGCAGCAAGC+GGG | - | chr5.3:7202396-7202415 | None:intergenic | 50.0% | |
| AGAATACAGGGAAGGCTGGA+AGG | + | chr5.3:7203283-7203302 | MS.gene21486:intron | 50.0% | |
| AGCGAGCATAGCACTGTAGT+AGG | - | chr5.3:7203070-7203089 | None:intergenic | 50.0% | |
| ATGCATGGAGTACACGGATG+AGG | + | chr5.3:7204730-7204749 | MS.gene21486:CDS | 50.0% | |
| ATGTACCCATCGAAGCTCCT+AGG | + | chr5.3:7203777-7203796 | MS.gene21486:intron | 50.0% | |
| ATTGGAGCTACGACACGGAA+TGG | + | chr5.3:7201826-7201845 | MS.gene21486:CDS | 50.0% | |
| CAATGACAACGGCGCAAACA+AGG | + | chr5.3:7203991-7204010 | MS.gene21486:intron | 50.0% | |
| CATCAGGGTTACCAGTTGCT+GGG | + | chr5.3:7204679-7204698 | MS.gene21486:CDS | 50.0% | |
| CCAAAGAATACAGGGAAGGC+TGG | + | chr5.3:7203279-7203298 | MS.gene21486:intron | 50.0% | |
| CCAGATATTTCTCCGGTCAG+CGG | + | chr5.3:7200678-7200697 | MS.gene21486:CDS | 50.0% | |
| CCAGCCTTCCCTGTATTCTT+TGG | - | chr5.3:7203282-7203301 | None:intergenic | 50.0% | |
| CGGTTTCGGTATGATTGAGG+AGG | - | chr5.3:7203543-7203562 | None:intergenic | 50.0% | |
| CTCCTTACCGGTACTTCTGT+CGG | - | chr5.3:7204128-7204147 | None:intergenic | 50.0% | |
| GCATCCCATAGTAGTCGATG+TGG | + | chr5.3:7205072-7205091 | MS.gene21486:intron | 50.0% | |
| GGTAAGGAGGCTGGATGTAA+TGG | + | chr5.3:7204139-7204158 | MS.gene21486:intron | 50.0% | |
| GGTAGGCAGGGAGAAAAACT+AGG | - | chr5.3:7204361-7204380 | None:intergenic | 50.0% | |
| GGTGTGGTATTTAAGTGGCC+TGG | - | chr5.3:7205050-7205069 | None:intergenic | 50.0% | |
| GGTGTGTTGTAGAGGCTTCT+GGG | + | chr5.3:7200527-7200546 | MS.gene21486:CDS | 50.0% | |
| GTGGATAATCAGGGTAGGCA+GGG | - | chr5.3:7204373-7204392 | None:intergenic | 50.0% | |
| GTTACCAGTTGCTGGGACAA+CGG | + | chr5.3:7204686-7204705 | MS.gene21486:CDS | 50.0% | |
| TCAGTCCCTGACCTGGATTT+AGG | + | chr5.3:7204259-7204278 | MS.gene21486:intron | 50.0% | |
| TGCATGGAGTACACGGATGA+GGG | + | chr5.3:7204731-7204750 | MS.gene21486:CDS | 50.0% | |
| TGGTGTGTTGTAGAGGCTTC+TGG | + | chr5.3:7200526-7200545 | MS.gene21486:CDS | 50.0% | |
| ! | AGGCCTTTTCCCTTTAGGTG+AGG | + | chr5.3:7204011-7204030 | MS.gene21486:intron | 50.0% |
| ! | GGAACCTTTGCGATTCGGAT+GGG | - | chr5.3:7206057-7206076 | None:intergenic | 50.0% |
| ! | GGATTTGGTCATGCCCGTAA+GGG | + | chr5.3:7201185-7201204 | MS.gene21486:intron | 50.0% |
| ! | TCTGGCGTTGGAGAAATGTC+GGG | - | chr5.3:7200663-7200682 | None:intergenic | 50.0% |
| ! | TGGAACCTTTGCGATTCGGA+TGG | - | chr5.3:7206058-7206077 | None:intergenic | 50.0% |
| ! | TGGATTTGGTCATGCCCGTA+AGG | + | chr5.3:7201184-7201203 | MS.gene21486:intron | 50.0% |
| ! | TTGGCTGTGAGTTTGCTTGC+TGG | - | chr5.3:7206078-7206097 | None:intergenic | 50.0% |
| ! | TTTGTCCCGCTTGCTGCTAA+GGG | + | chr5.3:7202388-7202407 | MS.gene21486:intron | 50.0% |
| !! | AACCGACAGAAGTACCGGTA+AGG | + | chr5.3:7204123-7204142 | MS.gene21486:intron | 50.0% |
| !! | CGTGACTGGTTTGGCTATTG+TGG | + | chr5.3:7200584-7200603 | MS.gene21486:CDS | 50.0% |
| ACTAGAGCTCCCGCATATGC+AGG | + | chr5.3:7202761-7202780 | MS.gene21486:intron | 55.0% | |
| AGACAAGCAGGTCCACCATC+AGG | + | chr5.3:7204663-7204682 | MS.gene21486:CDS | 55.0% | |
| ATACAGGGAAGGCTGGAAGG+TGG | + | chr5.3:7203286-7203305 | MS.gene21486:intron | 55.0% | |
| CCAGCAACTGGTAACCCTGA+TGG | - | chr5.3:7204681-7204700 | None:intergenic | 55.0% | |
| CCATCAGGGTTACCAGTTGC+TGG | + | chr5.3:7204678-7204697 | MS.gene21486:CDS | 55.0% | |
| CCGCTGACCGGAGAAATATC+TGG | - | chr5.3:7200681-7200700 | None:intergenic | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | chr5.3:7202762-7202781 | MS.gene21486:intron | 55.0% | |
| GACAAGCAGGTCCACCATCA+GGG | + | chr5.3:7204664-7204683 | MS.gene21486:CDS | 55.0% | |
| GAGTACACGGATGAGGGAGA+AGG | + | chr5.3:7204737-7204756 | MS.gene21486:CDS | 55.0% | |
| GCAACTGGTAACCCTGATGG+TGG | - | chr5.3:7204678-7204697 | None:intergenic | 55.0% | |
| GGTGGATAATCAGGGTAGGC+AGG | - | chr5.3:7204374-7204393 | None:intergenic | 55.0% | |
| GTGATCAAGGAGGGAGAACC+AGG | + | chr5.3:7205029-7205048 | MS.gene21486:intron | 55.0% | |
| ! | AGAGCACTATCACCGCTGAC+CGG | - | chr5.3:7200693-7200712 | None:intergenic | 55.0% |
| ! | CAAATGATGGGACCCCTTCC+CGG | - | chr5.3:7202789-7202808 | None:intergenic | 55.0% |
| ! | CTACTATGGGATGCTCGGTG+TGG | - | chr5.3:7205066-7205085 | None:intergenic | 55.0% |
| ! | CTTTGTCCCGCTTGCTGCTA+AGG | + | chr5.3:7202387-7202406 | MS.gene21486:intron | 55.0% |
| !! | AGAAGTACCGGTAAGGAGGC+TGG | + | chr5.3:7204130-7204149 | MS.gene21486:intron | 55.0% |
| !! | ATATGGGCGGCCGTTGCTTT+TGG | + | chr5.3:7200719-7200738 | MS.gene21486:CDS | 55.0% |
| !! | CGACAGAAGTACCGGTAAGG+AGG | + | chr5.3:7204126-7204145 | MS.gene21486:intron | 55.0% |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr5.3:7202774-7202793 | MS.gene21486:intron | 60.0% | |
| CGGGAAGGGGTCCCATCATT+TGG | + | chr5.3:7202787-7202806 | MS.gene21486:intron | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr5.3:7202774-7202793 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr5.3:7202773-7202792 | MS.gene21486:intron | 60.0% | |
| TGGTCCGTTGTCCCAGCAAC+TGG | - | chr5.3:7204693-7204712 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr5.3:7202773-7202792 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr5.3:7202757-7202776 | None:intergenic | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr5.3:7202772-7202791 | MS.gene21486:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr5.3:7202768-7202787 | MS.gene21486:intron | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr5.3:7202767-7202786 | MS.gene21486:intron | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr5.3:7202756-7202775 | None:intergenic | 65.0% |
| !! | GGCTGCCGAACTTGCTGCCT+TGG | - | chr5.3:7204630-7204649 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 7200525 | 7206129 | 7200525 | ID=MS.gene21486 |
| chr5.3 | mRNA | 7200525 | 7206129 | 7200525 | ID=MS.gene21486.t1;Parent=MS.gene21486 |
| chr5.3 | exon | 7200525 | 7200787 | 7200525 | ID=MS.gene21486.t1.exon1;Parent=MS.gene21486.t1 |
| chr5.3 | CDS | 7200525 | 7200787 | 7200525 | ID=cds.MS.gene21486.t1;Parent=MS.gene21486.t1 |
| chr5.3 | exon | 7201765 | 7201864 | 7201765 | ID=MS.gene21486.t1.exon2;Parent=MS.gene21486.t1 |
| chr5.3 | CDS | 7201765 | 7201864 | 7201765 | ID=cds.MS.gene21486.t1;Parent=MS.gene21486.t1 |
| chr5.3 | exon | 7202047 | 7202127 | 7202047 | ID=MS.gene21486.t1.exon3;Parent=MS.gene21486.t1 |
| chr5.3 | CDS | 7202047 | 7202127 | 7202047 | ID=cds.MS.gene21486.t1;Parent=MS.gene21486.t1 |
| chr5.3 | exon | 7202216 | 7202320 | 7202216 | ID=MS.gene21486.t1.exon4;Parent=MS.gene21486.t1 |
| chr5.3 | CDS | 7202216 | 7202320 | 7202216 | ID=cds.MS.gene21486.t1;Parent=MS.gene21486.t1 |
| chr5.3 | exon | 7204546 | 7204758 | 7204546 | ID=MS.gene21486.t1.exon5;Parent=MS.gene21486.t1 |
| chr5.3 | CDS | 7204546 | 7204758 | 7204546 | ID=cds.MS.gene21486.t1;Parent=MS.gene21486.t1 |
| chr5.3 | exon | 7206022 | 7206129 | 7206022 | ID=MS.gene21486.t1.exon6;Parent=MS.gene21486.t1 |
| chr5.3 | CDS | 7206022 | 7206129 | 7206022 | ID=cds.MS.gene21486.t1;Parent=MS.gene21486.t1 |
| Gene Sequence |
| Protein sequence |
