Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21791.t1 | XP_003610788.1 | 98.9 | 436 | 5 | 0 | 1 | 436 | 1 | 436 | 9.30E-257 | 895.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21791.t1 | Q8R1R3 | 28.4 | 194 | 128 | 5 | 149 | 338 | 136 | 322 | 9.4e-16 | 86.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21791.t1 | G7K527 | 98.9 | 436 | 5 | 0 | 1 | 436 | 1 | 436 | 6.7e-257 | 895.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049580 | MS.gene21791 | 0.80518 | 1.51E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene21791 | 0.803176 | 3.95E-49 | -1.69E-46 |
| MS.gene051902 | MS.gene21791 | 0.818248 | 2.16E-52 | -1.69E-46 |
| MS.gene051903 | MS.gene21791 | 0.834236 | 3.37E-56 | -1.69E-46 |
| MS.gene052818 | MS.gene21791 | -0.80441 | 2.19E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene21791 | 0.807365 | 5.24E-50 | -1.69E-46 |
| MS.gene055174 | MS.gene21791 | 0.815622 | 8.41E-52 | -1.69E-46 |
| MS.gene055424 | MS.gene21791 | 0.82438 | 8.33E-54 | -1.69E-46 |
| MS.gene057094 | MS.gene21791 | 0.828738 | 7.61E-55 | -1.69E-46 |
| MS.gene057234 | MS.gene21791 | 0.830065 | 3.62E-55 | -1.69E-46 |
| MS.gene057999 | MS.gene21791 | 0.818276 | 2.13E-52 | -1.69E-46 |
| MS.gene058074 | MS.gene21791 | 0.957394 | 3.02E-115 | -1.69E-46 |
| MS.gene058238 | MS.gene21791 | 0.804466 | 2.13E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene21791 | 0.800342 | 1.51E-48 | -1.69E-46 |
| MS.gene060763 | MS.gene21791 | 0.804663 | 1.94E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024815 | MS.gene21791 | PPI |
| MS.gene40498 | MS.gene21791 | PPI |
| MS.gene058074 | MS.gene21791 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21791.t1 | MTR_5g007030 | 98.853 | 436 | 5 | 0 | 1 | 436 | 1 | 436 | 0.0 | 894 |
| MS.gene21791.t1 | MTR_5g007030 | 99.042 | 313 | 3 | 0 | 124 | 436 | 14 | 326 | 0.0 | 646 |
| MS.gene21791.t1 | MTR_3g092640 | 42.657 | 429 | 228 | 7 | 12 | 434 | 1 | 417 | 3.13e-121 | 359 |
| MS.gene21791.t1 | MTR_1g078030 | 42.755 | 421 | 200 | 8 | 17 | 435 | 9 | 390 | 9.26e-117 | 347 |
| MS.gene21791.t1 | MTR_4g005140 | 29.018 | 224 | 150 | 4 | 126 | 347 | 62 | 278 | 1.03e-31 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21791.t1 | AT4G14500 | 65.831 | 439 | 141 | 5 | 1 | 436 | 1 | 433 | 0.0 | 597 |
| MS.gene21791.t1 | AT3G23080 | 65.429 | 431 | 130 | 7 | 9 | 436 | 5 | 419 | 0.0 | 558 |
| MS.gene21791.t1 | AT3G23080 | 64.851 | 404 | 123 | 7 | 36 | 436 | 1 | 388 | 0.0 | 512 |
| MS.gene21791.t1 | AT3G23080 | 64.851 | 404 | 123 | 7 | 36 | 436 | 1 | 388 | 0.0 | 512 |
| MS.gene21791.t1 | AT1G64720 | 44.096 | 415 | 181 | 6 | 21 | 435 | 17 | 380 | 1.11e-121 | 359 |
| MS.gene21791.t1 | AT5G54170 | 45.561 | 428 | 212 | 6 | 23 | 434 | 6 | 428 | 1.35e-120 | 358 |
| MS.gene21791.t1 | AT4G14500 | 60.072 | 278 | 106 | 3 | 1 | 274 | 1 | 277 | 8.27e-117 | 343 |
| MS.gene21791.t1 | AT3G13062 | 29.934 | 304 | 189 | 9 | 136 | 431 | 84 | 371 | 4.97e-36 | 137 |
| MS.gene21791.t1 | AT3G13062 | 31.250 | 304 | 185 | 10 | 136 | 431 | 84 | 371 | 1.02e-35 | 137 |
| MS.gene21791.t1 | AT3G13062 | 29.167 | 312 | 189 | 9 | 136 | 431 | 84 | 379 | 1.30e-34 | 133 |
| MS.gene21791.t1 | AT1G55960 | 31.727 | 249 | 156 | 6 | 128 | 369 | 75 | 316 | 2.51e-30 | 121 |
| MS.gene21791.t1 | AT1G55960 | 28.829 | 222 | 121 | 6 | 128 | 344 | 75 | 264 | 1.46e-18 | 87.4 |
Find 124 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGCTTTGTATTGCATATT+TGG | 0.148571 | 5.2:-1579867 | None:intergenic |
| TGGGACTGTTGCTGTGGTTT+TGG | 0.168770 | 5.2:+1581382 | MS.gene21791:CDS |
| CCTAACTTTGCAACATCTTT+TGG | 0.178743 | 5.2:-1581113 | None:intergenic |
| AGTTAGTGAGGGATTTCTTC+TGG | 0.188486 | 5.2:+1580232 | MS.gene21791:CDS |
| TTCCCGATCACTGCAGAAAA+AGG | 0.234946 | 5.2:-1580436 | None:intergenic |
| AATTGTTCACTGGATTAAAA+AGG | 0.263893 | 5.2:+1580335 | MS.gene21791:CDS |
| CCAAAAGATGTTGCAAAGTT+AGG | 0.281442 | 5.2:+1581113 | MS.gene21791:CDS |
| GGAGCAAGTTTCGTTTCTTA+TGG | 0.297226 | 5.2:+1577949 | MS.gene21791:CDS |
| TGCTATGCGCGGTTCCGATT+TGG | 0.305122 | 5.2:+1577850 | MS.gene21791:CDS |
| CGTCTGGGCTTATCGCGTTT+TGG | 0.309096 | 5.2:-1580885 | None:intergenic |
| GGATTATTTATTCGATGTTA+TGG | 0.311579 | 5.2:+1577782 | MS.gene21791:CDS |
| ATACATTAGGTCCGGTGATA+TGG | 0.313982 | 5.2:+1579731 | MS.gene21791:intron |
| ACAACCAGGCTTTCTTCTAA+TGG | 0.315169 | 5.2:+1581251 | MS.gene21791:CDS |
| TTGGTCTAATTTCAAAATTA+AGG | 0.316711 | 5.2:+1578052 | MS.gene21791:CDS |
| TACAGTTACAGAGGCTGATT+TGG | 0.318868 | 5.2:+1579773 | MS.gene21791:CDS |
| TCTCTATTTGTCGCAGATAT+TGG | 0.336013 | 5.2:+1578033 | MS.gene21791:CDS |
| TGGAAACTTGCATTCGTTAG+AGG | 0.346382 | 5.2:+1581271 | MS.gene21791:CDS |
| AAAGTAGAGGTCTACGCGTC+TGG | 0.348134 | 5.2:-1580901 | None:intergenic |
| CATCTTCTTCATCTTCTTGA+AGG | 0.364952 | 5.2:+1579798 | MS.gene21791:CDS |
| GATTGGAAGTGGGTGGCCTT+AGG | 0.367105 | 5.2:+1581359 | MS.gene21791:CDS |
| CGAGCATTGTTGTTGGGAGC+AGG | 0.370322 | 5.2:+1581428 | MS.gene21791:CDS |
| GTTAGTGAGGGATTTCTTCT+GGG | 0.373539 | 5.2:+1580233 | MS.gene21791:CDS |
| ATATTATTGCTCGAAGGATT+TGG | 0.373822 | 5.2:+1580460 | MS.gene21791:CDS |
| TGGACGGTTCCGCCGGGATT+CGG | 0.387516 | 5.2:+1577969 | MS.gene21791:CDS |
| TTGGAGGAATGCCCTCATAA+TGG | 0.394374 | 5.2:+1580306 | MS.gene21791:CDS |
| AATCTGTCGGGCATTGTTGA+TGG | 0.394962 | 5.2:-1581324 | None:intergenic |
| GTTAGAGGATGCGTCTTTGA+TGG | 0.400725 | 5.2:+1581286 | MS.gene21791:CDS |
| TTTGTCGAGATGTGCGTTGA+TGG | 0.403304 | 5.2:+1581220 | MS.gene21791:CDS |
| GATTCGGTGCTCGCCGTCTC+TGG | 0.407752 | 5.2:+1577985 | MS.gene21791:CDS |
| ACGCTACCAAACACGCTTCT+CGG | 0.411331 | 5.2:+1578123 | MS.gene21791:CDS |
| GACTTCTCTTCATCGGTCTT+CGG | 0.414196 | 5.2:+1577928 | MS.gene21791:CDS |
| GGCGTCATCAGAACACGAAT+TGG | 0.416015 | 5.2:-1578096 | None:intergenic |
| TGCGAGCATAGGATCCCATT+TGG | 0.417922 | 5.2:-1580271 | None:intergenic |
| CCATGTCTTCGTGATGCAAA+AGG | 0.428688 | 5.2:-1581085 | None:intergenic |
| TTTCTTATGGACGGTTCCGC+CGG | 0.430105 | 5.2:+1577962 | MS.gene21791:CDS |
| TGGAGGAATGCCCTCATAAT+GGG | 0.431673 | 5.2:+1580307 | MS.gene21791:CDS |
| GTAGGGCGAGCATTGTTGTT+GGG | 0.436511 | 5.2:+1581422 | MS.gene21791:CDS |
| ACAATTGATGTCCCATTATG+AGG | 0.437523 | 5.2:-1580318 | None:intergenic |
| CATCTTCTTGAAGGGAAAGA+TGG | 0.441427 | 5.2:+1579807 | MS.gene21791:CDS |
| ATCATGACCGCAAGCCAAAT+CGG | 0.444905 | 5.2:-1577864 | None:intergenic |
| GAATTACCGAGAAGCGTGTT+TGG | 0.447476 | 5.2:-1578129 | None:intergenic |
| AGGCCACCCACTTCCAATCC+AGG | 0.453527 | 5.2:-1581355 | None:intergenic |
| CAAAATTAAGGAGAAAGTGC+TGG | 0.453707 | 5.2:+1578064 | MS.gene21791:CDS |
| TGGAAGTGGGTGGCCTTAGG+TGG | 0.465831 | 5.2:+1581362 | MS.gene21791:CDS |
| AGATTGGTCACGGCCTGGAT+TGG | 0.468477 | 5.2:+1581342 | MS.gene21791:CDS |
| ATTTGGCTTGCGGTCATGAT+CGG | 0.474486 | 5.2:+1577867 | MS.gene21791:CDS |
| CGCGGTTCCGATTTGGCTTG+CGG | 0.475791 | 5.2:+1577857 | MS.gene21791:CDS |
| GTCACGGCCTGGATTGGAAG+TGG | 0.475906 | 5.2:+1581348 | MS.gene21791:CDS |
| ACGAATGTTTCAGTTATTGA+AGG | 0.479120 | 5.2:-1577819 | None:intergenic |
| GTGGAATCTCGCAAAGGAGA+TGG | 0.484870 | 5.2:+1581038 | MS.gene21791:intron |
| ATCAACAATGCCCGACAGAT+TGG | 0.485079 | 5.2:+1581326 | MS.gene21791:CDS |
| GTTTGGTGATCGGTTGGTCA+TGG | 0.485828 | 5.2:+1577889 | MS.gene21791:CDS |
| AGACGGCGAGCACCGAATCC+CGG | 0.489608 | 5.2:-1577981 | None:intergenic |
| GCGAGCATAGGATCCCATTT+GGG | 0.491899 | 5.2:-1580270 | None:intergenic |
| TGACAGCTCCCCACATTCCA+TGG | 0.497311 | 5.2:-1581142 | None:intergenic |
| GTCATGATCGGTTTGGTGAT+CGG | 0.504723 | 5.2:+1577879 | MS.gene21791:CDS |
| AGTAGGGCGAGCATTGTTGT+TGG | 0.504978 | 5.2:+1581421 | MS.gene21791:CDS |
| TTCTTATGGACGGTTCCGCC+GGG | 0.508895 | 5.2:+1577963 | MS.gene21791:CDS |
| ATGGGACATCAATTGTTCAC+TGG | 0.510323 | 5.2:+1580325 | MS.gene21791:CDS |
| TCATGGCGCCCACGGTGGAC+CGG | 0.511756 | 5.2:+1577906 | MS.gene21791:CDS |
| TATTGCTCGAAGGATTTGGC+AGG | 0.516863 | 5.2:+1580464 | MS.gene21791:CDS |
| GCTTGCGGTCATGATCGGTT+TGG | 0.517226 | 5.2:+1577872 | MS.gene21791:CDS |
| CAAATATGCAATACAAAGCT+TGG | 0.518060 | 5.2:+1579868 | MS.gene21791:CDS |
| CAAGTTTCGTTTCTTATGGA+CGG | 0.518083 | 5.2:+1577953 | MS.gene21791:CDS |
| TCTAGTTGGGTAATCAAACC+TGG | 0.518454 | 5.2:+1580924 | MS.gene21791:CDS |
| TGATCGGTTTGGTGATCGGT+TGG | 0.518750 | 5.2:+1577883 | MS.gene21791:CDS |
| GGAAGTGGGTGGCCTTAGGT+GGG | 0.520331 | 5.2:+1581363 | MS.gene21791:CDS |
| GTTTCCATTAGAAGAAAGCC+TGG | 0.520462 | 5.2:-1581255 | None:intergenic |
| TAGGAGTTCGCCATGGAATG+TGG | 0.521492 | 5.2:+1581132 | MS.gene21791:CDS |
| CGCACACTGCAAAGTGTTGG+AGG | 0.521745 | 5.2:+1580290 | MS.gene21791:CDS |
| GAGCATTGTTGTTGGGAGCA+GGG | 0.522764 | 5.2:+1581429 | MS.gene21791:CDS |
| ATCTTCTTCATCTTCTTGAA+GGG | 0.522948 | 5.2:+1579799 | MS.gene21791:CDS |
| GGAAAGATGGAGAGATTGAC+TGG | 0.525971 | 5.2:+1579820 | MS.gene21791:CDS |
| TGGAATCTCGCAAAGGAGAT+GGG | 0.527938 | 5.2:+1581039 | MS.gene21791:CDS |
| CATGTCTTCGTGATGCAAAA+GGG | 0.535250 | 5.2:-1581084 | None:intergenic |
| TGAGAGCATACCAGAATGCT+AGG | 0.537126 | 5.2:+1581183 | MS.gene21791:CDS |
| GGTATACACAGTGGTGCAGT+AGG | 0.538233 | 5.2:+1581404 | MS.gene21791:CDS |
| CCGACAGATTGGTCACGGCC+TGG | 0.540884 | 5.2:+1581337 | MS.gene21791:CDS |
| GCTCGAAGGATTTGGCAGGC+TGG | 0.543160 | 5.2:+1580468 | MS.gene21791:CDS |
| AAGTAGAGGTCTACGCGTCT+GGG | 0.548459 | 5.2:-1580900 | None:intergenic |
| TCGGTTGGTCATGGCGCCCA+CGG | 0.549219 | 5.2:+1577898 | MS.gene21791:CDS |
| CTTAGGTGGGACTGTTGCTG+TGG | 0.550839 | 5.2:+1581376 | MS.gene21791:CDS |
| TCACGGCCTGGATTGGAAGT+GGG | 0.553226 | 5.2:+1581349 | MS.gene21791:CDS |
| GCTCGCACACTGCAAAGTGT+TGG | 0.555461 | 5.2:+1580287 | MS.gene21791:CDS |
| AAGAAATCCCTCACTAACTC+AGG | 0.556254 | 5.2:-1580228 | None:intergenic |
| ACTTTGCAGTGTGCGAGCAT+AGG | 0.560803 | 5.2:-1580282 | None:intergenic |
| TCAGAACACGAATTGGAAGA+AGG | 0.560879 | 5.2:-1578089 | None:intergenic |
| AGGAGTTCGCCATGGAATGT+GGG | 0.565387 | 5.2:+1581133 | MS.gene21791:CDS |
| CAGGCCGTGACCAATCTGTC+GGG | 0.566688 | 5.2:-1581336 | None:intergenic |
| CCAGGCCGTGACCAATCTGT+CGG | 0.568274 | 5.2:-1581337 | None:intergenic |
| AGCGTGTTTGGTAGCGTCGG+TGG | 0.579757 | 5.2:-1578117 | None:intergenic |
| CACAGCAACAGTCCCACCTA+AGG | 0.583165 | 5.2:-1581375 | None:intergenic |
| CAATTGATGTCCCATTATGA+GGG | 0.583701 | 5.2:-1580317 | None:intergenic |
| TGCGTCTTTGATGGAAGAGA+GGG | 0.591648 | 5.2:+1581295 | MS.gene21791:CDS |
| ATGCAACTCCTGAGTTAGTG+AGG | 0.591962 | 5.2:+1580220 | MS.gene21791:CDS |
| CTTCAAATACAGTTCTACTA+CGG | 0.596069 | 5.2:-1580197 | None:intergenic |
| AGAGAAGTCCGGTCCACCGT+GGG | 0.597045 | 5.2:-1577914 | None:intergenic |
| TGGGCAGTTGTCTGCATGCG+AGG | 0.601567 | 5.2:+1581058 | MS.gene21791:CDS |
| CGGCCTGGATTGGAAGTGGG+TGG | 0.605735 | 5.2:+1581352 | MS.gene21791:CDS |
| AAGACCGATGAAGAGAAGTC+CGG | 0.606267 | 5.2:-1577925 | None:intergenic |
| CGGTGAACGCTAACCAGAGA+CGG | 0.606502 | 5.2:-1577998 | None:intergenic |
| ATGCGTCTTTGATGGAAGAG+AGG | 0.608772 | 5.2:+1581294 | MS.gene21791:CDS |
| TGCATACTACTGTGTGACAA+AGG | 0.612553 | 5.2:+1580494 | MS.gene21791:CDS |
| GTTGGTCATGGCGCCCACGG+TGG | 0.618187 | 5.2:+1577901 | MS.gene21791:CDS |
| AATAGAGAAAGCAGAAAGAG+CGG | 0.618635 | 5.2:-1578018 | None:intergenic |
| GGGAATATATTATTGCTCGA+AGG | 0.619326 | 5.2:+1580454 | MS.gene21791:CDS |
| TGGACCGGACTTCTCTTCAT+CGG | 0.622743 | 5.2:+1577921 | MS.gene21791:CDS |
| TCTCTCGTCAGCCATATCAC+CGG | 0.623742 | 5.2:-1579742 | None:intergenic |
| TGCAACTCCTGAGTTAGTGA+GGG | 0.625852 | 5.2:+1580221 | MS.gene21791:CDS |
| GAGCAGGGCATAGATTTGCA+CGG | 0.635579 | 5.2:+1581444 | MS.gene21791:CDS |
| AGAAGCGTGTTTGGTAGCGT+CGG | 0.637843 | 5.2:-1578120 | None:intergenic |
| AGACAAGGATACAGTTACAG+AGG | 0.641279 | 5.2:+1579764 | MS.gene21791:CDS |
| TTACCCAACTAGAAAAGTAG+AGG | 0.644640 | 5.2:-1580914 | None:intergenic |
| GCTGTCAAGAAATTGCACTC+TGG | 0.647856 | 5.2:+1581158 | MS.gene21791:CDS |
| AATGCCCGACAGATTGGTCA+CGG | 0.651595 | 5.2:+1581332 | MS.gene21791:CDS |
| GGAGTTCGCCATGGAATGTG+GGG | 0.655861 | 5.2:+1581134 | MS.gene21791:CDS |
| TGATGGCAAGTAAAACAACC+AGG | 0.673260 | 5.2:+1581237 | MS.gene21791:CDS |
| AGCTTGGCGTTATGACTCTG+AGG | 0.673296 | 5.2:+1579884 | MS.gene21791:CDS |
| TATGGCTGACGAGAGAGACA+AGG | 0.679529 | 5.2:+1579749 | MS.gene21791:CDS |
| GTATACACAGTGGTGCAGTA+GGG | 0.686841 | 5.2:+1581405 | MS.gene21791:CDS |
| GCAAAGTTAGGAGTTCGCCA+TGG | 0.689467 | 5.2:+1581125 | MS.gene21791:CDS |
| GATGCAGTGGAATCTCGCAA+AGG | 0.695128 | 5.2:+1581032 | MS.gene21791:intron |
| AAGAGAAGTCCGGTCCACCG+TGG | 0.703241 | 5.2:-1577915 | None:intergenic |
| CGGCGAGCACCGAATCCCGG+CGG | 0.734938 | 5.2:-1577978 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATTGAAATTTATC+TGG | + | chr5.2:1578197-1578216 | MS.gene21791:intron | 10.0% |
| !! | AAAAAGAAATATAAGAAACA+GGG | - | chr5.2:1580731-1580750 | None:intergenic | 15.0% |
| !! | TACAACATTAACTATTTATT+TGG | - | chr5.2:1580369-1580388 | None:intergenic | 15.0% |
| !! | TGAAATATATATAATGTATC+AGG | + | chr5.2:1578233-1578252 | MS.gene21791:intron | 15.0% |
| !!! | AGACTATATATAATTTTGTT+GGG | + | chr5.2:1578646-1578665 | MS.gene21791:intron | 15.0% |
| !!! | TAGACTATATATAATTTTGT+TGG | + | chr5.2:1578645-1578664 | MS.gene21791:intron | 15.0% |
| !! | AGAACTTATAGTAGAAAATA+TGG | + | chr5.2:1578393-1578412 | MS.gene21791:intron | 20.0% |
| !! | AGGTTTATGAAAAATTAGAT+TGG | - | chr5.2:1580758-1580777 | None:intergenic | 20.0% |
| !! | AGTATTATAACAACATAGAT+TGG | - | chr5.2:1579267-1579286 | None:intergenic | 20.0% |
| !! | CAAAAAGAAATATAAGAAAC+AGG | - | chr5.2:1580732-1580751 | None:intergenic | 20.0% |
| !! | TAGCATCAACTATTTAATAA+TGG | + | chr5.2:1580982-1581001 | MS.gene21791:intron | 20.0% |
| !! | TTGGTCTAATTTCAAAATTA+AGG | + | chr5.2:1578052-1578071 | MS.gene21791:CDS | 20.0% |
| !!! | ATATTATACTGTATTTCTAG+CGG | + | chr5.2:1579665-1579684 | MS.gene21791:intron | 20.0% |
| !!! | GATTTTTATTGTTGTTGTTA+AGG | + | chr5.2:1578586-1578605 | MS.gene21791:intron | 20.0% |
| !!! | GTAATTCACTACATTATTTT+TGG | + | chr5.2:1578145-1578164 | MS.gene21791:intron | 20.0% |
| !!! | TATATAATTTTGTTGGGTTA+AGG | + | chr5.2:1578652-1578671 | MS.gene21791:intron | 20.0% |
| !!! | TTTGTTATGATTTTTCTACT+TGG | + | chr5.2:1579452-1579471 | MS.gene21791:intron | 20.0% |
| ! | AAAACACTCTTTCAAAAATG+TGG | - | chr5.2:1578813-1578832 | None:intergenic | 25.0% |
| ! | AATTGTTCACTGGATTAAAA+AGG | + | chr5.2:1580335-1580354 | MS.gene21791:CDS | 25.0% |
| ! | ACATAAATCCACTTTAAACT+AGG | - | chr5.2:1580034-1580053 | None:intergenic | 25.0% |
| ! | GGATTATTTATTCGATGTTA+TGG | + | chr5.2:1577782-1577801 | MS.gene21791:CDS | 25.0% |
| ! | TGATACAAAATACCCTAATT+TGG | + | chr5.2:1579171-1579190 | MS.gene21791:intron | 25.0% |
| !! | ATTTAGTCTTCAATGTTGTA+GGG | + | chr5.2:1580843-1580862 | MS.gene21791:intron | 25.0% |
| !! | TATTTAGTCTTCAATGTTGT+AGG | + | chr5.2:1580842-1580861 | MS.gene21791:intron | 25.0% |
| !! | TGGTTTCAATTCAAGTTATT+AGG | + | chr5.2:1578165-1578184 | MS.gene21791:intron | 25.0% |
| !! | TGGTTTTTGATATAACACTA+TGG | + | chr5.2:1578517-1578536 | MS.gene21791:intron | 25.0% |
| !! | TTTTACTTCCTAGTTTAAAG+TGG | + | chr5.2:1580023-1580042 | MS.gene21791:intron | 25.0% |
| !! | TTTTTACTTAGCTACCTTTT+AGG | + | chr5.2:1578713-1578732 | MS.gene21791:intron | 25.0% |
| !!! | ATGAAGCGTTTTATTCATTT+TGG | + | chr5.2:1579692-1579711 | MS.gene21791:intron | 25.0% |
| !!! | GTTTTATTCATTTTGGAACT+TGG | + | chr5.2:1579699-1579718 | MS.gene21791:intron | 25.0% |
| !!! | TATACTTTTTCAGCATTTGT+AGG | + | chr5.2:1578292-1578311 | MS.gene21791:intron | 25.0% |
| AAATTTGCAAACAAAGCCTT+AGG | + | chr5.2:1579040-1579059 | MS.gene21791:intron | 30.0% | |
| AAGGAACTCAAACATTGTAT+TGG | - | chr5.2:1578900-1578919 | None:intergenic | 30.0% | |
| AATAAATCAGCATCTGATCT+TGG | + | chr5.2:1580145-1580164 | MS.gene21791:intron | 30.0% | |
| AATAGATTCTCTACCTCTAA+AGG | - | chr5.2:1578460-1578479 | None:intergenic | 30.0% | |
| AATATATCAAACAACCATCC+AGG | - | chr5.2:1579650-1579669 | None:intergenic | 30.0% | |
| AATCAAACCTGGTAAGAAAT+AGG | + | chr5.2:1580935-1580954 | MS.gene21791:intron | 30.0% | |
| AATTGATGTTCCTATGTAAG+TGG | + | chr5.2:1579612-1579631 | MS.gene21791:intron | 30.0% | |
| AATTTGCAAACAAAGCCTTA+GGG | + | chr5.2:1579041-1579060 | MS.gene21791:intron | 30.0% | |
| ACGAATGTTTCAGTTATTGA+AGG | - | chr5.2:1577822-1577841 | None:intergenic | 30.0% | |
| AGAAAATCCTGTTAATCTGA+AGG | + | chr5.2:1580612-1580631 | MS.gene21791:intron | 30.0% | |
| AGGTAGAGAATCTATTAAGA+AGG | + | chr5.2:1578464-1578483 | MS.gene21791:intron | 30.0% | |
| ATATGGTACAAACTAGACTT+AGG | + | chr5.2:1578410-1578429 | MS.gene21791:intron | 30.0% | |
| ATATTATTGCTCGAAGGATT+TGG | + | chr5.2:1580460-1580479 | MS.gene21791:CDS | 30.0% | |
| ATCTTCTTCATCTTCTTGAA+GGG | + | chr5.2:1579799-1579818 | MS.gene21791:CDS | 30.0% | |
| ATTAGACACACAGAAGAAAT+TGG | - | chr5.2:1579518-1579537 | None:intergenic | 30.0% | |
| ATTGATGTTCCTATGTAAGT+GGG | + | chr5.2:1579613-1579632 | MS.gene21791:intron | 30.0% | |
| CAAATATGCAATACAAAGCT+TGG | + | chr5.2:1579868-1579887 | MS.gene21791:CDS | 30.0% | |
| CTCAAAAATTGTATCACAAC+TGG | + | chr5.2:1579199-1579218 | MS.gene21791:intron | 30.0% | |
| CTTCAAATACAGTTCTACTA+CGG | - | chr5.2:1580200-1580219 | None:intergenic | 30.0% | |
| GAAGCTGATTGTCATATTTA+AGG | - | chr5.2:1579543-1579562 | None:intergenic | 30.0% | |
| GATTATACAGTGTAAACGTA+AGG | + | chr5.2:1580812-1580831 | MS.gene21791:intron | 30.0% | |
| GTATTTAATGTACACTGACA+TGG | + | chr5.2:1580386-1580405 | MS.gene21791:intron | 30.0% | |
| TACAAAATACCCTAATTTGG+AGG | + | chr5.2:1579174-1579193 | MS.gene21791:intron | 30.0% | |
| TTGGATATCCTTTCTATTTG+AGG | + | chr5.2:1579997-1580016 | MS.gene21791:intron | 30.0% | |
| TTGGTTATTGCACATACATT+AGG | + | chr5.2:1579718-1579737 | MS.gene21791:intron | 30.0% | |
| ! | AGCTTCTTTTTACTGTATCA+TGG | + | chr5.2:1579557-1579576 | MS.gene21791:intron | 30.0% |
| ! | ATTGTATCACAACTGGATTT+TGG | + | chr5.2:1579206-1579225 | MS.gene21791:intron | 30.0% |
| ! | CAAGCTTTGTATTGCATATT+TGG | - | chr5.2:1579870-1579889 | None:intergenic | 30.0% |
| ! | CTTTGTTTGCAAATTTGGAA+GGG | - | chr5.2:1579036-1579055 | None:intergenic | 30.0% |
| ! | TAATGAGTTGGATAAAGACA+TGG | + | chr5.2:1578497-1578516 | MS.gene21791:intron | 30.0% |
| ! | TATTGTTGTTGTTAAGGAAC+TGG | + | chr5.2:1578592-1578611 | MS.gene21791:intron | 30.0% |
| ! | TGTTCAATTTTCATCTTGTG+CGG | + | chr5.2:1579917-1579936 | MS.gene21791:intron | 30.0% |
| ! | TTTAGTCTTCAATGTTGTAG+GGG | + | chr5.2:1580844-1580863 | MS.gene21791:intron | 30.0% |
| !! | AAGTTTTATCCCACTAAACA+GGG | - | chr5.2:1578566-1578585 | None:intergenic | 30.0% |
| !! | TAAAAGTGCCTCAAATAGAA+AGG | - | chr5.2:1580008-1580027 | None:intergenic | 30.0% |
| !! | TAAGGCTTTGTTTGCAAATT+TGG | - | chr5.2:1579041-1579060 | None:intergenic | 30.0% |
| !!! | TTTTGAGTTCCTCCAAATTA+GGG | - | chr5.2:1579186-1579205 | None:intergenic | 30.0% |
| !!! | TTTTTGAGTTCCTCCAAATT+AGG | - | chr5.2:1579187-1579206 | None:intergenic | 30.0% |
| AAACTAGACTTAGGTGGTTT+GGG | + | chr5.2:1578419-1578438 | MS.gene21791:intron | 35.0% | |
| AATAGAGAAAGCAGAAAGAG+CGG | - | chr5.2:1578021-1578040 | None:intergenic | 35.0% | |
| ACAATTGATGTCCCATTATG+AGG | - | chr5.2:1580321-1580340 | None:intergenic | 35.0% | |
| ACTCTCAAACAAAGCCTAAA+AGG | - | chr5.2:1578730-1578749 | None:intergenic | 35.0% | |
| AGATCCTACACATAGAATCA+CGG | - | chr5.2:1579491-1579510 | None:intergenic | 35.0% | |
| ATTAGAGAGATAGAGAGAGT+TGG | + | chr5.2:1578367-1578386 | MS.gene21791:intron | 35.0% | |
| CAAGTTTCGTTTCTTATGGA+CGG | + | chr5.2:1577953-1577972 | MS.gene21791:CDS | 35.0% | |
| CAATTGATGTCCCATTATGA+GGG | - | chr5.2:1580320-1580339 | None:intergenic | 35.0% | |
| CATCTTCTTCATCTTCTTGA+AGG | + | chr5.2:1579798-1579817 | MS.gene21791:CDS | 35.0% | |
| CCAAAAGATGTTGCAAAGTT+AGG | + | chr5.2:1581113-1581132 | MS.gene21791:CDS | 35.0% | |
| GATGAAGTGGAATGAATGAA+GGG | + | chr5.2:1579108-1579127 | MS.gene21791:intron | 35.0% | |
| GGATCTAGAGATTAATGAGT+TGG | + | chr5.2:1578485-1578504 | MS.gene21791:intron | 35.0% | |
| GGGAATATATTATTGCTCGA+AGG | + | chr5.2:1580454-1580473 | MS.gene21791:CDS | 35.0% | |
| TATTGCACATACATTAGGTC+CGG | + | chr5.2:1579723-1579742 | MS.gene21791:intron | 35.0% | |
| TCTCTATTTGTCGCAGATAT+TGG | + | chr5.2:1578033-1578052 | MS.gene21791:CDS | 35.0% | |
| TCTGTTTGAGAGTTTAGGAA+GGG | + | chr5.2:1579064-1579083 | MS.gene21791:intron | 35.0% | |
| TGTAGAGAGAAAACCTTTAG+AGG | + | chr5.2:1578444-1578463 | MS.gene21791:intron | 35.0% | |
| TTACCCAACTAGAAAAGTAG+AGG | - | chr5.2:1580917-1580936 | None:intergenic | 35.0% | |
| TTAGAGAGATAGAGAGAGTT+GGG | + | chr5.2:1578368-1578387 | MS.gene21791:intron | 35.0% | |
| TTATCTCGTTTCTTTCCCAA+TGG | + | chr5.2:1580561-1580580 | MS.gene21791:intron | 35.0% | |
| TTCCATATTTGACACCCAAA+AGG | + | chr5.2:1580066-1580085 | MS.gene21791:intron | 35.0% | |
| TTTGCAAATTTGGAAGGGAA+GGG | - | chr5.2:1579031-1579050 | None:intergenic | 35.0% | |
| TTTGGAAAAAAGGAAGAAGC+AGG | - | chr5.2:1578998-1579017 | None:intergenic | 35.0% | |
| ! | AACTTTGCCTATTTCTTACC+AGG | - | chr5.2:1580945-1580964 | None:intergenic | 35.0% |
| ! | AGGAATAGAAGACTTTGGAA+TGG | - | chr5.2:1578971-1578990 | None:intergenic | 35.0% |
| ! | ATGATGATTTTCGTCCCAAA+TGG | + | chr5.2:1580256-1580275 | MS.gene21791:CDS | 35.0% |
| ! | CAAAATTAAGGAGAAAGTGC+TGG | + | chr5.2:1578064-1578083 | MS.gene21791:CDS | 35.0% |
| ! | CCTAACTTTGCAACATCTTT+TGG | - | chr5.2:1581116-1581135 | None:intergenic | 35.0% |
| ! | CTTTGTTTGAGAGTTTGAAG+GGG | + | chr5.2:1578736-1578755 | MS.gene21791:intron | 35.0% |
| ! | GACTATGTAATGAGCCTTTT+GGG | - | chr5.2:1580083-1580102 | None:intergenic | 35.0% |
| ! | GATTGACTGGCAAAGTTTTA+TGG | + | chr5.2:1579833-1579852 | MS.gene21791:CDS | 35.0% |
| ! | GTTTGAGTTCCTTCAAAGTA+GGG | + | chr5.2:1578907-1578926 | MS.gene21791:intron | 35.0% |
| ! | TATCACAACTGGATTTTGGA+GGG | + | chr5.2:1579210-1579229 | MS.gene21791:intron | 35.0% |
| ! | TGACTATGTAATGAGCCTTT+TGG | - | chr5.2:1580084-1580103 | None:intergenic | 35.0% |
| ! | TGATGATTTTCGTCCCAAAT+GGG | + | chr5.2:1580257-1580276 | MS.gene21791:CDS | 35.0% |
| ! | TGTTTGAGTTCCTTCAAAGT+AGG | + | chr5.2:1578906-1578925 | MS.gene21791:intron | 35.0% |
| ! | TTAGTCTTCAATGTTGTAGG+GGG | + | chr5.2:1580845-1580864 | MS.gene21791:intron | 35.0% |
| ! | TTTGAGTTCCTTCAAAGTAG+GGG | + | chr5.2:1578908-1578927 | MS.gene21791:intron | 35.0% |
| ! | TTTTCAGCATTTGTAGGAAC+TGG | + | chr5.2:1578298-1578317 | MS.gene21791:intron | 35.0% |
| ! | TTTTCTGACAACACATACAC+AGG | - | chr5.2:1580778-1580797 | None:intergenic | 35.0% |
| !! | ACTGGCAAAGTTTTATGGAA+AGG | + | chr5.2:1579838-1579857 | MS.gene21791:CDS | 35.0% |
| !! | CAAGTTTTATCCCACTAAAC+AGG | - | chr5.2:1578567-1578586 | None:intergenic | 35.0% |
| !! | CTTTTCTAGTGACAGAAGAA+TGG | - | chr5.2:1580594-1580613 | None:intergenic | 35.0% |
| !! | GCTTTGTTTGAGAGTTTGAA+GGG | + | chr5.2:1578735-1578754 | MS.gene21791:intron | 35.0% |
| !! | GCTTTGTTTGCAAATTTGGA+AGG | - | chr5.2:1579037-1579056 | None:intergenic | 35.0% |
| !! | GGAATAGAAGACTTTGGAAT+GGG | - | chr5.2:1578970-1578989 | None:intergenic | 35.0% |
| !! | TAGACCTCTACTTTTCTAGT+TGG | + | chr5.2:1580910-1580929 | MS.gene21791:CDS | 35.0% |
| !! | TGTCTAGTATTGACATGTGA+TGG | + | chr5.2:1578258-1578277 | MS.gene21791:intron | 35.0% |
| !!! | AATGAATGAAGGGTTTTGAG+AGG | + | chr5.2:1579118-1579137 | MS.gene21791:intron | 35.0% |
| !!! | AGACCTCTACTTTTCTAGTT+GGG | + | chr5.2:1580911-1580930 | MS.gene21791:CDS | 35.0% |
| !!! | ATGAATGAAGGGTTTTGAGA+GGG | + | chr5.2:1579119-1579138 | MS.gene21791:intron | 35.0% |
| AAACTCTCAAACAGACCCTA+AGG | - | chr5.2:1579059-1579078 | None:intergenic | 40.0% | |
| AAGAAATCCCTCACTAACTC+AGG | - | chr5.2:1580231-1580250 | None:intergenic | 40.0% | |
| AATGCTGCAACCATACTCTA+AGG | - | chr5.2:1579416-1579435 | None:intergenic | 40.0% | |
| ACAACCAGGCTTTCTTCTAA+TGG | + | chr5.2:1581251-1581270 | MS.gene21791:CDS | 40.0% | |
| AGACAAGGATACAGTTACAG+AGG | + | chr5.2:1579764-1579783 | MS.gene21791:CDS | 40.0% | |
| AGTTAGTGAGGGATTTCTTC+TGG | + | chr5.2:1580232-1580251 | MS.gene21791:CDS | 40.0% | |
| ATACATTAGGTCCGGTGATA+TGG | + | chr5.2:1579731-1579750 | MS.gene21791:intron | 40.0% | |
| ATGGGACATCAATTGTTCAC+TGG | + | chr5.2:1580325-1580344 | MS.gene21791:CDS | 40.0% | |
| CAAACTAGACTTAGGTGGTT+TGG | + | chr5.2:1578418-1578437 | MS.gene21791:intron | 40.0% | |
| CATCTTCTTGAAGGGAAAGA+TGG | + | chr5.2:1579807-1579826 | MS.gene21791:CDS | 40.0% | |
| CATGTCTTCGTGATGCAAAA+GGG | - | chr5.2:1581087-1581106 | None:intergenic | 40.0% | |
| GAAAGAAAGGAAGGATGAAG+TGG | + | chr5.2:1579095-1579114 | MS.gene21791:intron | 40.0% | |
| GGAGCAAGTTTCGTTTCTTA+TGG | + | chr5.2:1577949-1577968 | MS.gene21791:CDS | 40.0% | |
| GGATGAAGTGGAATGAATGA+AGG | + | chr5.2:1579107-1579126 | MS.gene21791:intron | 40.0% | |
| GTAGGAACTGGTTATATGTG+TGG | + | chr5.2:1578310-1578329 | MS.gene21791:intron | 40.0% | |
| GTCTGTTTGAGAGTTTAGGA+AGG | + | chr5.2:1579063-1579082 | MS.gene21791:intron | 40.0% | |
| GTGGAAGGAATAGAAGACTT+TGG | - | chr5.2:1578976-1578995 | None:intergenic | 40.0% | |
| GTTAGTGAGGGATTTCTTCT+GGG | + | chr5.2:1580233-1580252 | MS.gene21791:CDS | 40.0% | |
| GTTAGTGCCTTCAGATTAAC+AGG | - | chr5.2:1580622-1580641 | None:intergenic | 40.0% | |
| GTTTCCATTAGAAGAAAGCC+TGG | - | chr5.2:1581258-1581277 | None:intergenic | 40.0% | |
| GTTTGCAAATTTGGAAGGGA+AGG | - | chr5.2:1579032-1579051 | None:intergenic | 40.0% | |
| TACAGTTACAGAGGCTGATT+TGG | + | chr5.2:1579773-1579792 | MS.gene21791:CDS | 40.0% | |
| TAGAGAGATAGAGAGAGTTG+GGG | + | chr5.2:1578369-1578388 | MS.gene21791:intron | 40.0% | |
| TAGGGTCTGTTTGAGAGTTT+AGG | + | chr5.2:1579059-1579078 | MS.gene21791:intron | 40.0% | |
| TCAAAATCCCCCTACTTTGA+AGG | - | chr5.2:1578919-1578938 | None:intergenic | 40.0% | |
| TCAGAACACGAATTGGAAGA+AGG | - | chr5.2:1578092-1578111 | None:intergenic | 40.0% | |
| TCTAGTTGGGTAATCAAACC+TGG | + | chr5.2:1580924-1580943 | MS.gene21791:CDS | 40.0% | |
| TGATGGCAAGTAAAACAACC+AGG | + | chr5.2:1581237-1581256 | MS.gene21791:CDS | 40.0% | |
| TGCATACTACTGTGTGACAA+AGG | + | chr5.2:1580494-1580513 | MS.gene21791:CDS | 40.0% | |
| TGCGGATATTGTCTGTAATC+TGG | + | chr5.2:1579935-1579954 | MS.gene21791:intron | 40.0% | |
| TGGAAACTTGCATTCGTTAG+AGG | + | chr5.2:1581271-1581290 | MS.gene21791:CDS | 40.0% | |
| TGGTACAAACTAGACTTAGG+TGG | + | chr5.2:1578413-1578432 | MS.gene21791:intron | 40.0% | |
| TTCTAGTGACAGAAGAATGG+AGG | - | chr5.2:1580591-1580610 | None:intergenic | 40.0% | |
| TTGAGTTCCTTCAAAGTAGG+GGG | + | chr5.2:1578909-1578928 | MS.gene21791:intron | 40.0% | |
| ! | AAGGGAGGACTTTGAAAGAA+AGG | + | chr5.2:1579082-1579101 | MS.gene21791:intron | 40.0% |
| ! | CATCTGTTTTCCTAGCATTC+TGG | - | chr5.2:1581196-1581215 | None:intergenic | 40.0% |
| ! | CTTGGAGCTTTTAACAGACA+GGG | + | chr5.2:1580163-1580182 | MS.gene21791:intron | 40.0% |
| ! | CTTTTGCATCACGAAGACAT+GGG | + | chr5.2:1581086-1581105 | MS.gene21791:CDS | 40.0% |
| ! | GAGGACTTTGAAAGAAAGGA+AGG | + | chr5.2:1579086-1579105 | MS.gene21791:intron | 40.0% |
| ! | GTATCACAACTGGATTTTGG+AGG | + | chr5.2:1579209-1579228 | MS.gene21791:intron | 40.0% |
| ! | TCTTGGAGCTTTTAACAGAC+AGG | + | chr5.2:1580162-1580181 | MS.gene21791:intron | 40.0% |
| ! | TTGGAGCTTTTAACAGACAG+GGG | + | chr5.2:1580164-1580183 | MS.gene21791:intron | 40.0% |
| ! | TTTTGCATCACGAAGACATG+GGG | + | chr5.2:1581087-1581106 | MS.gene21791:CDS | 40.0% |
| !! | AACTGGATTTTGGAGGGTTT+TGG | + | chr5.2:1579216-1579235 | MS.gene21791:intron | 40.0% |
| !! | AGCCTTTTGGGTGTCAAATA+TGG | - | chr5.2:1580071-1580090 | None:intergenic | 40.0% |
| !! | ATAGAAGACTTTGGAATGGG+AGG | - | chr5.2:1578967-1578986 | None:intergenic | 40.0% |
| !! | CATACTCTAAGGCTTGGTTT+GGG | - | chr5.2:1579405-1579424 | None:intergenic | 40.0% |
| !! | CGTTTTGGCAAACTTGGATA+GGG | - | chr5.2:1580873-1580892 | None:intergenic | 40.0% |
| !! | GGCTTTGTTTGAGAGTTTGA+AGG | + | chr5.2:1578734-1578753 | MS.gene21791:intron | 40.0% |
| !! | TAGAAGACTTTGGAATGGGA+GGG | - | chr5.2:1578966-1578985 | None:intergenic | 40.0% |
| !! | TTATCGCGTTTTGGCAAACT+TGG | - | chr5.2:1580879-1580898 | None:intergenic | 40.0% |
| !!! | TGAATGAAGGGTTTTGAGAG+GGG | + | chr5.2:1579120-1579139 | MS.gene21791:intron | 40.0% |
| AAAAGGAAGAAGCAGGTGGA+AGG | - | chr5.2:1578991-1579010 | None:intergenic | 45.0% | |
| AAATTTGGAAGGGAAGGGAG+GGG | - | chr5.2:1579026-1579045 | None:intergenic | 45.0% | |
| AAGACCGATGAAGAGAAGTC+CGG | - | chr5.2:1577928-1577947 | None:intergenic | 45.0% | |
| AGTGTGCGAAATTGATGCAG+TGG | + | chr5.2:1581019-1581038 | MS.gene21791:intron | 45.0% | |
| AGTTTGGAGGGGAGATTAGA+GGG | - | chr5.2:1579382-1579401 | None:intergenic | 45.0% | |
| ATCAACAATGCCCGACAGAT+TGG | + | chr5.2:1581326-1581345 | MS.gene21791:CDS | 45.0% | |
| ATCATGACCGCAAGCCAAAT+CGG | - | chr5.2:1577867-1577886 | None:intergenic | 45.0% | |
| ATGCAACTCCTGAGTTAGTG+AGG | + | chr5.2:1580220-1580239 | MS.gene21791:CDS | 45.0% | |
| ATGCGTCTTTGATGGAAGAG+AGG | + | chr5.2:1581294-1581313 | MS.gene21791:CDS | 45.0% | |
| CAAATTTGGAAGGGAAGGGA+GGG | - | chr5.2:1579027-1579046 | None:intergenic | 45.0% | |
| CCAAACCAAGCCTTAGAGTA+TGG | + | chr5.2:1579403-1579422 | MS.gene21791:intron | 45.0% | |
| CCATGTCTTCGTGATGCAAA+AGG | - | chr5.2:1581088-1581107 | None:intergenic | 45.0% | |
| CTGCAGAAAAAGGGGAACTA+TGG | - | chr5.2:1580429-1580448 | None:intergenic | 45.0% | |
| GACTTCTCTTCATCGGTCTT+CGG | + | chr5.2:1577928-1577947 | MS.gene21791:CDS | 45.0% | |
| GCTGTCAAGAAATTGCACTC+TGG | + | chr5.2:1581158-1581177 | MS.gene21791:CDS | 45.0% | |
| GGAAAAAAGGAAGAAGCAGG+TGG | - | chr5.2:1578995-1579014 | None:intergenic | 45.0% | |
| GGAAAGATGGAGAGATTGAC+TGG | + | chr5.2:1579820-1579839 | MS.gene21791:CDS | 45.0% | |
| GTATACACAGTGGTGCAGTA+GGG | + | chr5.2:1581405-1581424 | MS.gene21791:CDS | 45.0% | |
| GTTAGAGGATGCGTCTTTGA+TGG | + | chr5.2:1581286-1581305 | MS.gene21791:CDS | 45.0% | |
| GTTTGAGAGTTTAGGAAGGG+AGG | + | chr5.2:1579067-1579086 | MS.gene21791:intron | 45.0% | |
| GTTTGAGAGTTTGAAGGGGA+GGG | + | chr5.2:1578740-1578759 | MS.gene21791:intron | 45.0% | |
| TATTGCTCGAAGGATTTGGC+AGG | + | chr5.2:1580464-1580483 | MS.gene21791:CDS | 45.0% | |
| TCCCGATCACTGCAGAAAAA+GGG | - | chr5.2:1580438-1580457 | None:intergenic | 45.0% | |
| TGCAACTCCTGAGTTAGTGA+GGG | + | chr5.2:1580221-1580240 | MS.gene21791:CDS | 45.0% | |
| TGCGTCTTTGATGGAAGAGA+GGG | + | chr5.2:1581295-1581314 | MS.gene21791:CDS | 45.0% | |
| TGGAATCTCGCAAAGGAGAT+GGG | + | chr5.2:1581039-1581058 | MS.gene21791:CDS | 45.0% | |
| TGGAGGAATGCCCTCATAAT+GGG | + | chr5.2:1580307-1580326 | MS.gene21791:CDS | 45.0% | |
| TGTTTGAGAGTTTGAAGGGG+AGG | + | chr5.2:1578739-1578758 | MS.gene21791:intron | 45.0% | |
| TTCCCGATCACTGCAGAAAA+AGG | - | chr5.2:1580439-1580458 | None:intergenic | 45.0% | |
| TTCGCCGTGATTCTATGTGT+AGG | + | chr5.2:1579484-1579503 | MS.gene21791:intron | 45.0% | |
| TTGGAGGAATGCCCTCATAA+TGG | + | chr5.2:1580306-1580325 | MS.gene21791:CDS | 45.0% | |
| TTTGTCGAGATGTGCGTTGA+TGG | + | chr5.2:1581220-1581239 | MS.gene21791:CDS | 45.0% | |
| ! | AAGAATGGAGGCTAGCCATT+GGG | - | chr5.2:1580579-1580598 | None:intergenic | 45.0% |
| ! | AATCTGTCGGGCATTGTTGA+TGG | - | chr5.2:1581327-1581346 | None:intergenic | 45.0% |
| ! | CCTTTTGCATCACGAAGACA+TGG | + | chr5.2:1581085-1581104 | MS.gene21791:CDS | 45.0% |
| ! | GAATTACCGAGAAGCGTGTT+TGG | - | chr5.2:1578132-1578151 | None:intergenic | 45.0% |
| ! | TCCCCTTTTTCTGCAGTGAT+CGG | + | chr5.2:1580433-1580452 | MS.gene21791:CDS | 45.0% |
| ! | TGAGAGCATACCAGAATGCT+AGG | + | chr5.2:1581183-1581202 | MS.gene21791:CDS | 45.0% |
| !! | ATTTGGCTTGCGGTCATGAT+CGG | + | chr5.2:1577867-1577886 | MS.gene21791:CDS | 45.0% |
| !! | CCATACTCTAAGGCTTGGTT+TGG | - | chr5.2:1579406-1579425 | None:intergenic | 45.0% |
| !! | CGTCGATATTTTGCTATGCG+CGG | + | chr5.2:1577839-1577858 | MS.gene21791:CDS | 45.0% |
| !! | CTAGAAGTGCCCACTTACAT+AGG | - | chr5.2:1579625-1579644 | None:intergenic | 45.0% |
| !! | GATTTTGGAGGGTTTTGGTG+TGG | + | chr5.2:1579221-1579240 | MS.gene21791:intron | 45.0% |
| !! | GCGTTTTGGCAAACTTGGAT+AGG | - | chr5.2:1580874-1580893 | None:intergenic | 45.0% |
| !! | GTCATGATCGGTTTGGTGAT+CGG | + | chr5.2:1577879-1577898 | MS.gene21791:CDS | 45.0% |
| !! | TAAGGCTTGGTTTGGGAGTT+TGG | - | chr5.2:1579398-1579417 | None:intergenic | 45.0% |
| !! | TGCAACCATACTCTAAGGCT+TGG | - | chr5.2:1579411-1579430 | None:intergenic | 45.0% |
| !!! | GTGGTTTTGGGTATACACAG+TGG | + | chr5.2:1581395-1581414 | MS.gene21791:CDS | 45.0% |
| !!! | TTACAAATAAATAATTTTTT+TGG | + | chr5.2:1579978-1579997 | MS.gene21791:intron | 5.0% |
| AAAGTAGAGGTCTACGCGTC+TGG | - | chr5.2:1580904-1580923 | None:intergenic | 50.0% | |
| AAGTAGAGGTCTACGCGTCT+GGG | - | chr5.2:1580903-1580922 | None:intergenic | 50.0% | |
| ACGCTACCAAACACGCTTCT+CGG | + | chr5.2:1578123-1578142 | MS.gene21791:CDS | 50.0% | |
| ACTTTGCAGTGTGCGAGCAT+AGG | - | chr5.2:1580285-1580304 | None:intergenic | 50.0% | |
| AGCTTGGCGTTATGACTCTG+AGG | + | chr5.2:1579884-1579903 | MS.gene21791:CDS | 50.0% | |
| AGGAGTTCGCCATGGAATGT+GGG | + | chr5.2:1581133-1581152 | MS.gene21791:CDS | 50.0% | |
| ATCCCACTAAACAGGGTCAG+CGG | - | chr5.2:1578559-1578578 | None:intergenic | 50.0% | |
| CCCGATCACTGCAGAAAAAG+GGG | - | chr5.2:1580437-1580456 | None:intergenic | 50.0% | |
| GAGCAGGGCATAGATTTGCA+CGG | + | chr5.2:1581444-1581463 | MS.gene21791:CDS | 50.0% | |
| GAGTTTGGAGGGGAGATTAG+AGG | - | chr5.2:1579383-1579402 | None:intergenic | 50.0% | |
| GATGCAGTGGAATCTCGCAA+AGG | + | chr5.2:1581032-1581051 | MS.gene21791:intron | 50.0% | |
| GCAAAGTTAGGAGTTCGCCA+TGG | + | chr5.2:1581125-1581144 | MS.gene21791:CDS | 50.0% | |
| GCAAATTTGGAAGGGAAGGG+AGG | - | chr5.2:1579028-1579047 | None:intergenic | 50.0% | |
| GCGAGCATAGGATCCCATTT+GGG | - | chr5.2:1580273-1580292 | None:intergenic | 50.0% | |
| GGCGTCATCAGAACACGAAT+TGG | - | chr5.2:1578099-1578118 | None:intergenic | 50.0% | |
| GGTATACACAGTGGTGCAGT+AGG | + | chr5.2:1581404-1581423 | MS.gene21791:CDS | 50.0% | |
| GTGGAATCTCGCAAAGGAGA+TGG | + | chr5.2:1581038-1581057 | MS.gene21791:intron | 50.0% | |
| GTTTGGAGGGGAGATTAGAG+GGG | - | chr5.2:1579381-1579400 | None:intergenic | 50.0% | |
| TAGGAGTTCGCCATGGAATG+TGG | + | chr5.2:1581132-1581151 | MS.gene21791:CDS | 50.0% | |
| TATGGCTGACGAGAGAGACA+AGG | + | chr5.2:1579749-1579768 | MS.gene21791:CDS | 50.0% | |
| TCTCTCGTCAGCCATATCAC+CGG | - | chr5.2:1579745-1579764 | None:intergenic | 50.0% | |
| TGCGAGCATAGGATCCCATT+TGG | - | chr5.2:1580274-1580293 | None:intergenic | 50.0% | |
| TGGACCGGACTTCTCTTCAT+CGG | + | chr5.2:1577921-1577940 | MS.gene21791:CDS | 50.0% | |
| TTTCTTATGGACGGTTCCGC+CGG | + | chr5.2:1577962-1577981 | MS.gene21791:CDS | 50.0% | |
| ! | AATGCCCGACAGATTGGTCA+CGG | + | chr5.2:1581332-1581351 | MS.gene21791:CDS | 50.0% |
| ! | AGTAGGGCGAGCATTGTTGT+TGG | + | chr5.2:1581421-1581440 | MS.gene21791:CDS | 50.0% |
| ! | CCCCTTTTTCTGCAGTGATC+GGG | + | chr5.2:1580434-1580453 | MS.gene21791:CDS | 50.0% |
| ! | GAAGAATGGAGGCTAGCCAT+TGG | - | chr5.2:1580580-1580599 | None:intergenic | 50.0% |
| ! | GAGCATTGTTGTTGGGAGCA+GGG | + | chr5.2:1581429-1581448 | MS.gene21791:CDS | 50.0% |
| ! | GGGACTGTTGCTGTGGTTTT+GGG | + | chr5.2:1581383-1581402 | MS.gene21791:CDS | 50.0% |
| ! | GTAGGGCGAGCATTGTTGTT+GGG | + | chr5.2:1581422-1581441 | MS.gene21791:CDS | 50.0% |
| ! | GTTTGGTGATCGGTTGGTCA+TGG | + | chr5.2:1577889-1577908 | MS.gene21791:CDS | 50.0% |
| ! | TGGGACTGTTGCTGTGGTTT+TGG | + | chr5.2:1581382-1581401 | MS.gene21791:CDS | 50.0% |
| !! | AAGTGGGCACTTCTAGTTCC+TGG | + | chr5.2:1579629-1579648 | MS.gene21791:intron | 50.0% |
| !! | ACTTTGGAATGGGAGGGCTT+TGG | - | chr5.2:1578960-1578979 | None:intergenic | 50.0% |
| !! | AGAAGCGTGTTTGGTAGCGT+CGG | - | chr5.2:1578123-1578142 | None:intergenic | 50.0% |
| !! | AGGGGAGGGCTTTGGAAAAA+AGG | - | chr5.2:1579008-1579027 | None:intergenic | 50.0% |
| !! | CTTGGTTTGGGAGTTTGGAG+GGG | - | chr5.2:1579393-1579412 | None:intergenic | 50.0% |
| !! | GCTTGGTTTGGGAGTTTGGA+GGG | - | chr5.2:1579394-1579413 | None:intergenic | 50.0% |
| !! | TGATCGGTTTGGTGATCGGT+TGG | + | chr5.2:1577883-1577902 | MS.gene21791:CDS | 50.0% |
| !! | TTTTGAGAGGGGAGGGCTTT+GGG | + | chr5.2:1579131-1579150 | MS.gene21791:intron | 50.0% |
| !!! | ATGAAGGGTTTTGAGAGGGG+AGG | + | chr5.2:1579123-1579142 | MS.gene21791:intron | 50.0% |
| !!! | TGAAGGGTTTTGAGAGGGGA+GGG | + | chr5.2:1579124-1579143 | MS.gene21791:intron | 50.0% |
| AGAGTTTGAAGGGGAGGGTG+AGG | + | chr5.2:1578745-1578764 | MS.gene21791:intron | 55.0% | |
| ATGCCGCTGACCCTGTTTAG+TGG | + | chr5.2:1578553-1578572 | MS.gene21791:intron | 55.0% | |
| CACAGCAACAGTCCCACCTA+AGG | - | chr5.2:1581378-1581397 | None:intergenic | 55.0% | |
| CGGTGAACGCTAACCAGAGA+CGG | - | chr5.2:1578001-1578020 | None:intergenic | 55.0% | |
| CTTAGGTGGGACTGTTGCTG+TGG | + | chr5.2:1581376-1581395 | MS.gene21791:CDS | 55.0% | |
| GAGTTTGAAGGGGAGGGTGA+GGG | + | chr5.2:1578746-1578765 | MS.gene21791:intron | 55.0% | |
| GATTGGAAGTGGGTGGCCTT+AGG | + | chr5.2:1581359-1581378 | MS.gene21791:CDS | 55.0% | |
| GCTCGCACACTGCAAAGTGT+TGG | + | chr5.2:1580287-1580306 | MS.gene21791:CDS | 55.0% | |
| GCTTGCGGTCATGATCGGTT+TGG | + | chr5.2:1577872-1577891 | MS.gene21791:CDS | 55.0% | |
| GGAGTTCGCCATGGAATGTG+GGG | + | chr5.2:1581134-1581153 | MS.gene21791:CDS | 55.0% | |
| TGACAGCTCCCCACATTCCA+TGG | - | chr5.2:1581145-1581164 | None:intergenic | 55.0% | |
| TGCCGCTGACCCTGTTTAGT+GGG | + | chr5.2:1578554-1578573 | MS.gene21791:intron | 55.0% | |
| TGCTATGCGCGGTTCCGATT+TGG | + | chr5.2:1577850-1577869 | MS.gene21791:CDS | 55.0% | |
| TTCTTATGGACGGTTCCGCC+GGG | + | chr5.2:1577963-1577982 | MS.gene21791:CDS | 55.0% | |
| TTTGAGAGGGGAGGGCTTTG+GGG | + | chr5.2:1579132-1579151 | MS.gene21791:intron | 55.0% | |
| ! | AGATTGGTCACGGCCTGGAT+TGG | + | chr5.2:1581342-1581361 | MS.gene21791:CDS | 55.0% |
| ! | CGAGCATTGTTGTTGGGAGC+AGG | + | chr5.2:1581428-1581447 | MS.gene21791:CDS | 55.0% |
| ! | CGTCTGGGCTTATCGCGTTT+TGG | - | chr5.2:1580888-1580907 | None:intergenic | 55.0% |
| ! | CTTTGGGGGGAGAGGAATAG+AGG | + | chr5.2:1578769-1578788 | MS.gene21791:intron | 55.0% |
| ! | TCACGGCCTGGATTGGAAGT+GGG | + | chr5.2:1581349-1581368 | MS.gene21791:CDS | 55.0% |
| !! | CGCACACTGCAAAGTGTTGG+AGG | + | chr5.2:1580290-1580309 | MS.gene21791:CDS | 55.0% |
| !! | GGCTTGGTTTGGGAGTTTGG+AGG | - | chr5.2:1579395-1579414 | None:intergenic | 55.0% |
| !! | GGGCACTTCTAGTTCCTGGA+TGG | + | chr5.2:1579633-1579652 | MS.gene21791:intron | 55.0% |
| !! | TGGAATGGGAGGGCTTTGGA+AGG | - | chr5.2:1578956-1578975 | None:intergenic | 55.0% |
| !! | TGGAGGGTTTTGGTGTGGCT+TGG | + | chr5.2:1579226-1579245 | MS.gene21791:intron | 55.0% |
| !!! | GTTTTGAGAGGGGAGGGCTT+TGG | + | chr5.2:1579130-1579149 | MS.gene21791:intron | 55.0% |
| AAGAGAAGTCCGGTCCACCG+TGG | - | chr5.2:1577918-1577937 | None:intergenic | 60.0% | |
| AAGGGGAGGGTGAGGGCTTT+GGG | + | chr5.2:1578753-1578772 | MS.gene21791:intron | 60.0% | |
| AGAGAAGTCCGGTCCACCGT+GGG | - | chr5.2:1577917-1577936 | None:intergenic | 60.0% | |
| AGGCCACCCACTTCCAATCC+AGG | - | chr5.2:1581358-1581377 | None:intergenic | 60.0% | |
| CAGGCCGTGACCAATCTGTC+GGG | - | chr5.2:1581339-1581358 | None:intergenic | 60.0% | |
| CCAGGCCGTGACCAATCTGT+CGG | - | chr5.2:1581340-1581359 | None:intergenic | 60.0% | |
| GCTCGAAGGATTTGGCAGGC+TGG | + | chr5.2:1580468-1580487 | MS.gene21791:CDS | 60.0% | |
| TGGGCAGTTGTCTGCATGCG+AGG | + | chr5.2:1581058-1581077 | MS.gene21791:CDS | 60.0% | |
| TTGGAAGGGAAGGGAGGGGA+GGG | - | chr5.2:1579022-1579041 | None:intergenic | 60.0% | |
| TTTGGAAGGGAAGGGAGGGG+AGG | - | chr5.2:1579023-1579042 | None:intergenic | 60.0% | |
| ! | GGAAGTGGGTGGCCTTAGGT+GGG | + | chr5.2:1581363-1581382 | MS.gene21791:CDS | 60.0% |
| ! | GTCACGGCCTGGATTGGAAG+TGG | + | chr5.2:1581348-1581367 | MS.gene21791:CDS | 60.0% |
| ! | TGGAAGTGGGTGGCCTTAGG+TGG | + | chr5.2:1581362-1581381 | MS.gene21791:CDS | 60.0% |
| !! | AGCGTGTTTGGTAGCGTCGG+TGG | - | chr5.2:1578120-1578139 | None:intergenic | 60.0% |
| !! | CGCGGTTCCGATTTGGCTTG+CGG | + | chr5.2:1577857-1577876 | MS.gene21791:CDS | 60.0% |
| AGGGGAGGGTGAGGGCTTTG+GGG | + | chr5.2:1578754-1578773 | MS.gene21791:intron | 65.0% | |
| GAAGGGGAGGGTGAGGGCTT+TGG | + | chr5.2:1578752-1578771 | MS.gene21791:intron | 65.0% | |
| TGGACGGTTCCGCCGGGATT+CGG | + | chr5.2:1577969-1577988 | MS.gene21791:CDS | 65.0% | |
| ! | CCGACAGATTGGTCACGGCC+TGG | + | chr5.2:1581337-1581356 | MS.gene21791:CDS | 65.0% |
| ! | CGGCCTGGATTGGAAGTGGG+TGG | + | chr5.2:1581352-1581371 | MS.gene21791:CDS | 65.0% |
| ! | TCGGTTGGTCATGGCGCCCA+CGG | + | chr5.2:1577898-1577917 | MS.gene21791:CDS | 65.0% |
| !! | AGACGGCGAGCACCGAATCC+CGG | - | chr5.2:1577984-1578003 | None:intergenic | 65.0% |
| !! | GATTCGGTGCTCGCCGTCTC+TGG | + | chr5.2:1577985-1578004 | MS.gene21791:CDS | 65.0% |
| GGGAAGGGAGGGGAGGGCTT+TGG | - | chr5.2:1579016-1579035 | None:intergenic | 70.0% | |
| GTTGGTCATGGCGCCCACGG+TGG | + | chr5.2:1577901-1577920 | MS.gene21791:CDS | 70.0% | |
| TCATGGCGCCCACGGTGGAC+CGG | + | chr5.2:1577906-1577925 | MS.gene21791:CDS | 70.0% | |
| ! | GGGGAGGGTGAGGGCTTTGG+GGG | + | chr5.2:1578755-1578774 | MS.gene21791:intron | 70.0% |
| !! | GGGAGGGTGAGGGCTTTGGG+GGG | + | chr5.2:1578756-1578775 | MS.gene21791:intron | 70.0% |
| !! | GGTGAGGGCTTTGGGGGGAG+AGG | + | chr5.2:1578761-1578780 | MS.gene21791:intron | 70.0% |
| !! | CGGCGAGCACCGAATCCCGG+CGG | - | chr5.2:1577981-1578000 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 1577777 | 1581472 | 1577777 | ID=MS.gene21791 |
| chr5.2 | mRNA | 1577777 | 1581472 | 1577777 | ID=MS.gene21791.t1;Parent=MS.gene21791 |
| chr5.2 | exon | 1577777 | 1578144 | 1577777 | ID=MS.gene21791.t1.exon1;Parent=MS.gene21791.t1 |
| chr5.2 | CDS | 1577777 | 1578144 | 1577777 | ID=cds.MS.gene21791.t1;Parent=MS.gene21791.t1 |
| chr5.2 | exon | 1579740 | 1579905 | 1579740 | ID=MS.gene21791.t1.exon2;Parent=MS.gene21791.t1 |
| chr5.2 | CDS | 1579740 | 1579905 | 1579740 | ID=cds.MS.gene21791.t1;Parent=MS.gene21791.t1 |
| chr5.2 | exon | 1580180 | 1580356 | 1580180 | ID=MS.gene21791.t1.exon3;Parent=MS.gene21791.t1 |
| chr5.2 | CDS | 1580180 | 1580356 | 1580180 | ID=cds.MS.gene21791.t1;Parent=MS.gene21791.t1 |
| chr5.2 | exon | 1580432 | 1580515 | 1580432 | ID=MS.gene21791.t1.exon4;Parent=MS.gene21791.t1 |
| chr5.2 | CDS | 1580432 | 1580515 | 1580432 | ID=cds.MS.gene21791.t1;Parent=MS.gene21791.t1 |
| chr5.2 | exon | 1580864 | 1580945 | 1580864 | ID=MS.gene21791.t1.exon5;Parent=MS.gene21791.t1 |
| chr5.2 | CDS | 1580864 | 1580945 | 1580864 | ID=cds.MS.gene21791.t1;Parent=MS.gene21791.t1 |
| chr5.2 | exon | 1581039 | 1581472 | 1581039 | ID=MS.gene21791.t1.exon6;Parent=MS.gene21791.t1 |
| chr5.2 | CDS | 1581039 | 1581472 | 1581039 | ID=cds.MS.gene21791.t1;Parent=MS.gene21791.t1 |
| Gene Sequence |
| Protein sequence |
